rna-TanjilR_05400

Transcript Overview
Namerna-TanjilR_05400
Unique Namerna-TanjilR_05400_La_Tanjil_v1.0
TypemRNA
OrganismLupinus angustifolius (blue lupin)
Sequence length1749
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_LG03-CM007363.1supercontigChr_LG03-CM007363.1:25045342..25047090 -Lupinus angustifolius L. Tanjil genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Lupinus angustifolius L. Tanjil genome v1.02019-09-17
InterProScan: L. angustifolius cv. Tanjil genome v1.02020-01-28
BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot2020-01-28
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ananL270Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananL294Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR534Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ananR538Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ancaiR0899Cicer arietinum ICC 4958 genome v2Cicer arietinum
anccR0997Cajanus cajan Asha genome v1.0Cajanus cajan
ancaR0763Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancaR0795Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ancrR0885Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0887Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ancrR0909Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
anpsR0631Pisum sativum Cameor genome v1aPisum sativum
anpsR0636Pisum sativum Cameor genome v1aPisum sativum
anpvR0858Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anpvR0888Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
anvuR0762Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anasR0811Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasR0819Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anzwsR0695Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anzwsR0720Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
anvfhR0713Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
antifR0712Vicia faba cv. Tiffany genome v1.0Vicia faba
antifR0724Vicia faba cv. Tiffany genome v1.0Vicia faba
anvfhR0730Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
anvrvR0701Vigna radiata cv. VC1973A genome v6.0Vigna radiata
anvuaR0736Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
anvssR0804Vicia sativa cv. Studenica genome v1.0Vicia sativa
anvssR0824Vicia sativa cv. Studenica genome v1.0Vicia sativa
ancanR0701Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ancanR0732Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
anavjR0788Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0799Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjR0849Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
ancarR0732Cicer arietinum
ancarR0772Cicer arietinum
anvumR0803Vigna umbellata FF25 genome v1.0Vigna umbellata
anccaR0745Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anccaR0764Cajanus cajan cv. Asha genome v2.0Cajanus cajan
anvumR0832Vigna umbellata FF25 genome v1.0Vigna umbellata
anvvaR0761Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvvaR0765Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstR0810Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0822Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvstR0834Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
anvasR0845Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvasR0870Vigna angularis cv. Shumari genome v1.a1Vigna angularis
anvunR0728Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
anpvfR0901Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0919Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
anpvfR0928Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.009G012500.3Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cc_v2.0_15047.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cr_11664.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_004500794.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan09g039500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Hedin2.R1.2g211920.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr09.1172.1.62113174Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_04819Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Ca_14511.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun09g261300.10Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va04G070840.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
XM_058929574.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
PvulFLAVERTChr09.1000131Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Tiffany.R1.2g171240.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun09g261300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_019481Cajanus cajan Asha genome v1.0Cajanus cajan
Psat5g009720.1Pisum sativum Cameor genome v1aPisum sativum
Vigan.02G019400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_014646546.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg56057.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vum_02G00165.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat05G0029100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigst.02G015800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-TanjilR_12313Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-TanjilG_05400gene-TanjilG_05400_La_Tanjil_v1.0Lupinus angustifoliusgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_05400rna-TanjilR_05400_La_Tanjil_v1.0-proteinLupinus angustifoliuspolypeptide
rna-TanjilR_05400_La_Tanjil_v1.0rna-TanjilR_05400_La_Tanjil_v1.0Lupinus angustifoliuspolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_05400_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:25045342..25047090rna-TanjilR_05400_La_Tanjil_v1.0-CDS-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:25045342..25047090Lupinus angustifoliusCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
rna-TanjilR_05400_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:25045342..25047090rna-TanjilR_05400_La_Tanjil_v1.0-exon-Chr_LG03-CM007363.1_La_Tanjil_v1.0-1579734366:25045342..25047090Lupinus angustifoliusexon


Homology
[Close]
BLAST of rna-TanjilR_05400 vs. DB:Swiss
Match: FK117_ARATH (F-box/kelch-repeat protein At5g42350 OS=Arabidopsis thaliana OX=3702 GN=At5g42350 PE=2 SV=1)

HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0
Identity = 333/585 (56.92%), Postives = 446/585 (76.24%), Query Frame = 1 
Query:    1 MVSER-LGVEEALCQDIQSLSVSKCLVRSVSQKLRKRKNNRSASKEDNDGGKGVSLRCLTLYGRGGGCKVGAXXXXXXXXXXXXXXXXXXXXXKGYRTIRGHEETSVNCFSYGVKDRFCRRQHNIRSSEFEELVTNSRMNIFLPDDILEMCLVRLPLTSLMNARLVCKKWRSLTTTPRFLQTRREGLYQSPWLFLFGVVKDGFCSGEIHALDVSLNQWHRIDAGFLKGRFLFSVASIHDDIFIVGGCSSLTNFGNVDRSSFKTHKGVVAFSPLTKSLRKIPPMKYARSVPLLGVSEVSLDFPSCQGHHSQMDRRFPRSRIGGISDVYEDPHKLSMRCHSRSSLNESEALSLPSRKAYKFLRQRSEQSSSKSGKRFVLIAVGGLGSWDEPLDSGEVYDSVSNKWTEIQRLPFDFGVACSGTVCGRMFYVYSETDKLAAYDIERGFWIAIQTTTFPPRVHEYYPKLVSCNGRLLMLSVSWC-EGDGQIGRRNKAVRKLWELDLMYLTWREVSVHPDAPMDWNAVFVADKNLIFGVEMFKIFGQVLDFFTVCDV-SDMANWNHISRNHATQELDASSCFTKSMVVLHL 1746
            M+SE+ LGVEE++ QD++ L+VS+ LV+SVSQKL+K K +++   ED +  +G ++ CL++     GC+V ADT ++  DSS +R SSASEEGKG  TI G EET ++CFSYGV++RF ++ +        +   + R +++LPDDILEMCL+RLPLTSL+NA LVCKKW+S+  T RFLQ RREG +Q+PWLFLF  +KDG  SG+IH  DVS ++WHRI+   LKGRF++SV SIH++I+IVGG S       +DR+SFK+H+G++ FSP  K+ RKI  M++ARS+P++G +EV+ +F + Q   ++ DRRF  SR+GG SDVYEDPH+LS+R  +R+S +++        K+++ +RQ+ ++ +  S KRFVLIA+GG G +DEPLDSGE+YDS +N W+E+QRLP  FGV   G +C  +FY YSE DKL+ YDIERGFWI IQT+  PPRVHE+YPKLVSCN RL MLSVSWC EGDGQIGRRNKAVRKLWELDL+YLTW EVSVHPDAPMDWNA +V+D+N++ G+EMFKIFGQVL FFTVCDV ++ A+W H+SRN  +Q+L+  SC  K++ +LHL
Sbjct:    2 MISEKPLGVEESIRQDLEVLTVSRRLVKSVSQKLKK-KIHKTEVVEDEEIARG-AVNCLSI---SVGCRV-ADTGEDFEDSSNKRWSSASEEGKGLMTICGTEETRLDCFSYGVRERFWKKNNR---KYLADSGQDYRKHVYLPDDILEMCLMRLPLTSLLNAHLVCKKWQSMANTQRFLQMRREGSFQTPWLFLFAALKDGCSSGDIHGYDVSQDKWHRIETDLLKGRFMYSVTSIHEEIYIVGGRS-------MDRNSFKSHRGILVFSPSIKAWRKIASMRHARSLPIVGATEVTSEFSTMQTKQNRQDRRFHLSRVGGESDVYEDPHRLSVRRQNRNSADQN------GTKSHRLIRQKLDRLNRNSSKRFVLIAIGGTGLFDEPLDSGEIYDSATNTWSEMQRLPMGFGVVSCGIICNGIFYAYSENDKLSGYDIERGFWITIQTSPIPPRVHEFYPKLVSCNHRLFMLSVSWCDEGDGQIGRRNKAVRKLWELDLVYLTWTEVSVHPDAPMDWNATYVSDQNILMGIEMFKIFGQVLSFFTVCDVLTEEASWRHVSRNQRSQKLNL-SCTNKTIALLHL 563
[Close]
BLAST of rna-TanjilR_05400 vs. DB:Swiss
Match: FK118_ARATH (F-box/kelch-repeat protein At5g42360 OS=Arabidopsis thaliana OX=3702 GN=At5g42360 PE=2 SV=1)

HSP 1 Score: 642.884 bits (1657), Expect = 0.000e+0
Identity = 325/584 (55.65%), Postives = 438/584 (75.00%), Query Frame = 1 
Query:    1 MVSERLGVEEALCQDIQSLSVSKCLVRSVSQKLRKRKNNRSASKEDNDGGKGVSLRCLTLYGRGGGCKVGAXXXXXXXXXXXXXXXXXXXXXKGYRTIRGHEETSVNCFSYGVKDRFCRRQHNIRSSEFEELVTNSRMNIFLPDDILEMCLVRLPLTSLMNARLVCKKWRSLTTTPRFLQTRREGLYQSPWLFLFGVVKDGFCSGEIHALDVSLNQWHRIDAGFLKGRFLFSVASIHDDIFIVGGCSSLTNFGNVDRSSFKTHKGVVAFSPLTKSLRKIPPMKYARSVPLLGVSEVSLDFPSCQGHHSQMDRRFPRSRIGGISDVYEDPHKLSMRCHSRSSLNESEALSLPSRKAYKFLRQRSEQSSSKSGKRFVLIAVGGLGSWDEPLDSGEVYDSVSNKWTEIQRLPFDFGVACSGTVCGRMFYVYSETDKLAAYDIERGFWIAIQTTTFPPRVHEYYPKLVSCNGRLLMLSVSWC-EGDGQIGRRNKAVRKLWELDLMYLTWREVSVHPDAPMDWNAVFVADKNLIFGVEMFKIFGQVLDFFTVCDV-SDMANWNHISRNHATQELDASSCFTKSMVVLHL 1746
            M+SE+   EE++ QD++ L+VS+ LV+SVSQKL+K K +++   ED +  +G ++ CL++     GC+V     D   D S +R SSASE+GKG  TI G EE  ++CFSYGV++RF ++ +    ++  +   + R +++LPDDILEMCL+RLPLTSL+NA LVCKKW+S+  T RFLQ RREG +Q+PWLFLF  +KDG  SG+IH  DVS ++WHRI+   LKGRF++SV SIH++I+IVGG S       +DR+SFK+H+G++ FSP  K+ RKI  M++ARS+P++G +EV+ +F + Q   ++ DRRF  SR+GG SDVYEDPH+LS+R  +R+S +++        K+++ +RQ+ ++ +  S KRFVLIA+GG G +DEPLDSGE+YDS +N W+E+QRLP  FGV   G +C  +FY YSE DKL+ YDIERGFWI IQT+  PPRVHE+YPKLVSCN RL MLSVSWC EGDGQIGRRNKAVRKLWELDL+YLTW EVSVHPDAPMDWNA +V+D+N++ GVEMFKIFGQVL FFTVCD+ ++ A+W H+SRN   Q+L+  SC  K++ +LHL
Sbjct:    2 MISEKPLGEESIRQDLEVLTVSRRLVKSVSQKLKK-KIHKTEVVEDEEVARG-AVNCLSI---SVGCRVADTGEDFEEDLSNKRWSSASEDGKGLMTICGTEEIRLDCFSYGVRERFWKKNNRRYLADSGQ---DYRKHVYLPDDILEMCLMRLPLTSLLNAHLVCKKWQSMANTQRFLQMRREGSFQTPWLFLFAALKDGCSSGDIHGYDVSQDKWHRIETDLLKGRFMYSVTSIHEEIYIVGGRS-------MDRNSFKSHRGILVFSPSIKAWRKIASMRHARSLPIVGATEVTSEFSTMQTKQNRQDRRFHLSRVGGESDVYEDPHRLSVRRQNRNSADQN------GTKSHRLIRQKLDRLNRNSSKRFVLIAIGGTGIFDEPLDSGEIYDSATNTWSEMQRLPMGFGVVSCGIICNGIFYAYSENDKLSGYDIERGFWITIQTSPIPPRVHEFYPKLVSCNHRLFMLSVSWCDEGDGQIGRRNKAVRKLWELDLVYLTWTEVSVHPDAPMDWNATYVSDQNILMGVEMFKIFGQVLSFFTVCDILTEEASWRHVSRNQRNQKLNL-SCMNKTIALLHL 563
[Close]
BLAST of rna-TanjilR_05400 vs. DB:Swiss
Match: FBK17_ARATH (F-box/kelch-repeat protein At1g30090 OS=Arabidopsis thaliana OX=3702 GN=At1g30090 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 8.203e-9
Identity = 37/101 (36.63%), Postives = 56/101 (55.45%), Query Frame = 1 
Query:  373 RSSEFEELVTNSRMNIFLPDDILEMCLVRLPLTSLMNARLVCKKWRSL-TTTPRFLQTRREGLYQSPWLFLFGVVKDGFCSGEIH--ALDVSLNQWHRIDA 666
            RSSE E  +    +   LPDD+   CL+R+P+ S ++++ VCK+W  L  T   F   R+E  ++ PWLF+ G  +   C+G+I    LD+    WH I A
Sbjct:   40 RSSELELSLRGEPLIPGLPDDVALNCLLRVPVQSHVSSKSVCKRWHLLFGTKETFFAKRKEFGFKDPWLFVVGFSR---CTGKIQWKVLDLRNLTWHEIPA 137
[Close]
BLAST of rna-TanjilR_05400 vs. DB:Swiss
Match: FBK77_ARATH (F-box/kelch-repeat protein At3g61590 OS=Arabidopsis thaliana OX=3702 GN=At3g61590 PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.874e-8
Identity = 42/145 (28.97%), Postives = 63/145 (43.45%), Query Frame = 1 
Query:  307 ETSVNCFSYGVKDRFCRRQHNIRSSEFEELVTNSRMNIFLPDDILEMCLVRLPLTSLMNARLVCKKWRSLTTTPRFL-QTRREGLYQSPWLFLFGVVKDGFCSGEIHALDVSLNQWHRIDAGFLKGRFLFSVASIHDDIFIVGGC 738
            ETS   + Y         +     S+ E  V    M+  LPDD+LE  L  LP+ S+  A  VCK+W  + ++ RFL       + Q PW F+F    D   SG  +A D  + +W+  D   ++    F  +S     F+   C
Sbjct:    4 ETSWTNYPYSYITYVPEAESYREQSDDEAKVETFSMDSLLPDDLLERILSFLPIASIFRAGTVCKRWNEIVSSRRFLCNFSNNSVSQRPWYFMFTTTDDP--SG--YAYDPIIRKWYSFDLPCIETSNWFVASSCGLVCFMDNDC 144
[Close]
BLAST of rna-TanjilR_05400 vs. DB:Swiss
Match: FBX6_ARATH (F-box only protein 6 OS=Arabidopsis thaliana OX=3702 GN=FBX6 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.425e-7
Identity = 42/157 (26.75%), Postives = 68/157 (43.31%), Query Frame = 1 
Query:  379 SEFEELVTNSRMNIF--LPDDILEMCLVRLPLTSLMNARLVCKKWRSLTTTPRFLQTRREGLYQSPWLFLFGVVKDGFCSGEIHALDVSLNQWHR-IDAGFLKGRFLFSVASIHDDIFIVGGCSSLTNFGNVDRSSFKTHKGVVAFSPLTKSLRKIP 840
            +E +E+  N    I+   P D+ E  + RLP+ +    R VC+KW +L  +  F +   E     PW   + +  +   SG+++  D SL +WH  I     K   +  +AS        GG     + G         H+     +PLTKS R++P
Sbjct:  103 TEVDEISGNMDQEIWQEFPQDLFEDVVSRLPMATFFQFRAVCRKWNALIDSDSFSRCFTELPQTIPW--FYTITHENVNSGQVY--DPSLKKWHHPIIPALPKKSIVLPMAS-------AGGLVCFLDIG---------HRNFYVSNPLTKSFRELP 239
The following BLAST results are available for this feature:
BLAST of rna-TanjilR_05400 vs. DB:Swiss
Analysis Date: 2020-01-28 (BLAST: L. angustifolius cv. Tanjil genome v1.0 vs. Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
FK117_ARATH0.000e+056.92F-box/kelch-repeat protein At5g42350 OS=Arabidopsi... [more]
FK118_ARATH0.000e+055.65F-box/kelch-repeat protein At5g42360 OS=Arabidopsi... [more]
FBK17_ARATH8.203e-936.63F-box/kelch-repeat protein At1g30090 OS=Arabidopsi... [more]
FBK77_ARATH3.874e-828.97F-box/kelch-repeat protein At3g61590 OS=Arabidopsi... [more]
FBX6_ARATH2.425e-726.75F-box only protein 6 OS=Arabidopsis thaliana OX=37... [more]
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InterPro
Analysis Name: InterProScan: L. angustifolius cv. Tanjil genome v1.0
Date Performed: 2020-01-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 142..182
e-value: 8.4E-9
score: 45.2
IPR001810F-box domainPFAMPF00646F-boxcoord: 142..179
e-value: 1.1E-9
score: 37.9
IPR001810F-box domainPROSITEPS50181FBOXcoord: 136..182
score: 9.524
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 189..292
e-value: 4.9E-6
score: 27.6
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 350..567
e-value: 3.2E-10
score: 41.4
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 190..530
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 376..407
e-value: 2.3E-5
score: 23.9
NoneNo IPR availableGENE3D1.20.1280.50coord: 140..188
e-value: 4.2E-8
score: 34.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..96
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 142..203

Sequences
The following sequences are available for this feature:

mRNA sequence

>rna-TanjilR_05400_La_Tanjil_v1.0 ID=rna-TanjilR_05400_La_Tanjil_v1.0; Name=rna-TanjilR_05400; organism=Lupinus angustifolius; type=mRNA; length=1749bp
ATGGTTTCAGAAAGGTTGGGGGTAGAGGAAGCACTTTGTCAAGATATTCA
GAGTTTGAGCGTGTCGAAGTGCCTTGTGAGGAGTGTTAGCCAGAAGTTGA
GGAAGAGGAAGAATAACCGAAGTGCGTCCAAAGAAGATAATGATGGTGGA
AAGGGAGTTTCTTTAAGGTGTCTAACTCTGTATGGTCGAGGTGGGGGATG
CAAGGTTGGTGCTGATACGAGTGATGAATCTGGTGATTCGAGTGGTAGAA
GGAGATCTAGTGCCAGTGAAGAAGGAAAGGGATATAGAACGATTCGTGGC
CATGAAGAAACTTCCGTGAATTGCTTTTCGTATGGGGTGAAGGATAGGTT
TTGTAGGAGACAACACAACATAAGGAGTTCTGAATTTGAAGAGTTGGTAA
CAAACAGTAGAATGAATATCTTTCTTCCTGATGATATCCTCGAAATGTGC
TTGGTTCGGCTCCCGTTGACGAGTCTCATGAATGCTCGCCTTGTTTGTAA
GAAATGGAGGTCCTTGACTACCACTCCTAGATTCCTCCAAACGAGGAGGG
AGGGTTTGTATCAAAGTCCTTGGTTGTTTCTTTTTGGTGTTGTTAAAGAT
GGCTTTTGCTCTGGCGAGATACATGCACTGGATGTGTCTCTGAATCAATG
GCATAGGATTGATGCTGGTTTTCTCAAAGGGAGGTTTTTGTTCTCTGTGG
CTAGTATACATGACGATATCTTCATAGTTGGAGGATGTTCTAGCTTGACT
AACTTCGGGAATGTGGATAGGAGCTCATTCAAGACGCACAAAGGGGTGGT
AGCATTTAGTCCCTTGACAAAGTCATTGCGTAAAATACCACCTATGAAAT
ATGCTAGATCGGTTCCTCTATTAGGAGTCTCTGAGGTCAGTTTGGATTTT
CCATCTTGTCAAGGTCATCATAGTCAGATGGATAGACGTTTTCCGAGATC
AAGGATTGGCGGGATTTCAGATGTCTATGAGGATCCTCATAAGCTTTCAA
TGAGATGTCATTCCAGATCTTCTCTCAATGAGAGTGAAGCCCTGTCCTTG
CCGAGTAGAAAAGCATACAAATTCCTTAGACAACGAAGTGAACAGTCAAG
CTCAAAGAGTGGTAAAAGATTTGTGTTGATAGCTGTAGGAGGTCTGGGAT
CTTGGGATGAGCCTCTTGACTCTGGAGAAGTATATGACTCCGTATCAAAT
AAATGGACTGAAATTCAGAGGCTGCCTTTTGATTTTGGGGTTGCTTGTTC
TGGAACTGTTTGTGGCAGGATGTTTTATGTTTATTCTGAGACGGACAAGC
TTGCAGCATATGACATCGAACGAGGTTTCTGGATTGCAATTCAAACCACT
ACATTCCCACCTCGTGTACATGAATACTACCCCAAACTTGTATCTTGTAA
TGGCCGTCTTTTAATGCTCTCAGTTTCATGGTGTGAAGGGGACGGTCAAA
TTGGGCGCCGAAACAAGGCTGTTAGAAAATTATGGGAGTTAGATCTCATG
TATCTTACCTGGCGTGAGGTCTCAGTGCATCCTGATGCCCCAATGGACTG
GAATGCGGTTTTTGTGGCAGACAAAAACCTGATTTTTGGGGTAGAGATGT
TCAAAATATTTGGTCAGGTGTTGGATTTTTTCACTGTATGTGACGTGTCT
GACATGGCAAACTGGAACCATATTTCAAGGAATCATGCTACTCAGGAGCT
GGACGCTTCTTCGTGCTTTACCAAATCTATGGTGGTATTACATCTTTGA
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protein sequence of rna-TanjilR_05400_La_Tanjil_v1.0

>rna-TanjilR_05400_La_Tanjil_v1.0 ID=rna-TanjilR_05400_La_Tanjil_v1.0; Name=rna-TanjilR_05400_La_Tanjil_v1.0; organism=Lupinus angustifolius; type=polypeptide; length=582bp
MVSERLGVEEALCQDIQSLSVSKCLVRSVSQKLRKRKNNRSASKEDNDGG
KGVSLRCLTLYGRGGGCKVGADTSDESGDSSGRRRSSASEEGKGYRTIRG
HEETSVNCFSYGVKDRFCRRQHNIRSSEFEELVTNSRMNIFLPDDILEMC
LVRLPLTSLMNARLVCKKWRSLTTTPRFLQTRREGLYQSPWLFLFGVVKD
GFCSGEIHALDVSLNQWHRIDAGFLKGRFLFSVASIHDDIFIVGGCSSLT
NFGNVDRSSFKTHKGVVAFSPLTKSLRKIPPMKYARSVPLLGVSEVSLDF
PSCQGHHSQMDRRFPRSRIGGISDVYEDPHKLSMRCHSRSSLNESEALSL
PSRKAYKFLRQRSEQSSSKSGKRFVLIAVGGLGSWDEPLDSGEVYDSVSN
KWTEIQRLPFDFGVACSGTVCGRMFYVYSETDKLAAYDIERGFWIAIQTT
TFPPRVHEYYPKLVSCNGRLLMLSVSWCEGDGQIGRRNKAVRKLWELDLM
YLTWREVSVHPDAPMDWNAVFVADKNLIFGVEMFKIFGQVLDFFTVCDVS
DMANWNHISRNHATQELDASSCFTKSMVVLHL
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mRNA from alignment at Chr_LG03-CM007363.1:25045342..25047090-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna-TanjilR_05400_La_Tanjil_v1.0 ID=rna-TanjilR_05400_La_Tanjil_v1.0; Name=rna-TanjilR_05400; organism=Lupinus angustifolius; type=mRNA; length=1749bp; location=Sequence derived from: Chr_LG03-CM007363.1:25045342..25047090- (Lupinus angustifolius
ATGGTTTCAGAAAGGTTGGGGGTAGAGGAAGCACTTTGTCAAGATATTCA
GAGTTTGAGCGTGTCGAAGTGCCTTGTGAGGAGTGTTAGCCAGAAGTTGA
GGAAGAGGAAGAATAACCGAAGTGCGTCCAAAGAAGATAATGATGGTGGA
AAGGGAGTTTCTTTAAGGTGTCTAACTCTGTATGGTCGAGGTGGGGGATG
CAAGGTTGGTGCTGATACGAGTGATGAATCTGGTGATTCGAGTGGTAGAA
GGAGATCTAGTGCCAGTGAAGAAGGAAAGGGATATAGAACGATTCGTGGC
CATGAAGAAACTTCCGTGAATTGCTTTTCGTATGGGGTGAAGGATAGGTT
TTGTAGGAGACAACACAACATAAGGAGTTCTGAATTTGAAGAGTTGGTAA
CAAACAGTAGAATGAATATCTTTCTTCCTGATGATATCCTCGAAATGTGC
TTGGTTCGGCTCCCGTTGACGAGTCTCATGAATGCTCGCCTTGTTTGTAA
GAAATGGAGGTCCTTGACTACCACTCCTAGATTCCTCCAAACGAGGAGGG
AGGGTTTGTATCAAAGTCCTTGGTTGTTTCTTTTTGGTGTTGTTAAAGAT
GGCTTTTGCTCTGGCGAGATACATGCACTGGATGTGTCTCTGAATCAATG
GCATAGGATTGATGCTGGTTTTCTCAAAGGGAGGTTTTTGTTCTCTGTGG
CTAGTATACATGACGATATCTTCATAGTTGGAGGATGTTCTAGCTTGACT
AACTTCGGGAATGTGGATAGGAGCTCATTCAAGACGCACAAAGGGGTGGT
AGCATTTAGTCCCTTGACAAAGTCATTGCGTAAAATACCACCTATGAAAT
ATGCTAGATCGGTTCCTCTATTAGGAGTCTCTGAGGTCAGTTTGGATTTT
CCATCTTGTCAAGGTCATCATAGTCAGATGGATAGACGTTTTCCGAGATC
AAGGATTGGCGGGATTTCAGATGTCTATGAGGATCCTCATAAGCTTTCAA
TGAGATGTCATTCCAGATCTTCTCTCAATGAGAGTGAAGCCCTGTCCTTG
CCGAGTAGAAAAGCATACAAATTCCTTAGACAACGAAGTGAACAGTCAAG
CTCAAAGAGTGGTAAAAGATTTGTGTTGATAGCTGTAGGAGGTCTGGGAT
CTTGGGATGAGCCTCTTGACTCTGGAGAAGTATATGACTCCGTATCAAAT
AAATGGACTGAAATTCAGAGGCTGCCTTTTGATTTTGGGGTTGCTTGTTC
TGGAACTGTTTGTGGCAGGATGTTTTATGTTTATTCTGAGACGGACAAGC
TTGCAGCATATGACATCGAACGAGGTTTCTGGATTGCAATTCAAACCACT
ACATTCCCACCTCGTGTACATGAATACTACCCCAAACTTGTATCTTGTAA
TGGCCGTCTTTTAATGCTCTCAGTTTCATGGTGTGAAGGGGACGGTCAAA
TTGGGCGCCGAAACAAGGCTGTTAGAAAATTATGGGAGTTAGATCTCATG
TATCTTACCTGGCGTGAGGTCTCAGTGCATCCTGATGCCCCAATGGACTG
GAATGCGGTTTTTGTGGCAGACAAAAACCTGATTTTTGGGGTAGAGATGT
TCAAAATATTTGGTCAGGTGTTGGATTTTTTCACTGTATGTGACGTGTCT
GACATGGCAAACTGGAACCATATTTCAAGGAATCATGCTACTCAGGAGCT
GGACGCTTCTTCGTGCTTTACCAAATCTATGGTGGTATTACATCTTTGA
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Coding sequence (CDS) from alignment at Chr_LG03-CM007363.1:25045342..25047090-

>rna-TanjilR_05400_La_Tanjil_v1.0 ID=rna-TanjilR_05400_La_Tanjil_v1.0; Name=rna-TanjilR_05400; organism=Lupinus angustifolius; type=CDS; length=1749bp; location=Sequence derived from: Chr_LG03-CM007363.1:25045342..25047090- (Lupinus angustifolius
ATGGTTTCAGAAAGGTTGGGGGTAGAGGAAGCACTTTGTCAAGATATTCA
GAGTTTGAGCGTGTCGAAGTGCCTTGTGAGGAGTGTTAGCCAGAAGTTGA
GGAAGAGGAAGAATAACCGAAGTGCGTCCAAAGAAGATAATGATGGTGGA
AAGGGAGTTTCTTTAAGGTGTCTAACTCTGTATGGTCGAGGTGGGGGATG
CAAGGTTGGTGCTGATACGAGTGATGAATCTGGTGATTCGAGTGGTAGAA
GGAGATCTAGTGCCAGTGAAGAAGGAAAGGGATATAGAACGATTCGTGGC
CATGAAGAAACTTCCGTGAATTGCTTTTCGTATGGGGTGAAGGATAGGTT
TTGTAGGAGACAACACAACATAAGGAGTTCTGAATTTGAAGAGTTGGTAA
CAAACAGTAGAATGAATATCTTTCTTCCTGATGATATCCTCGAAATGTGC
TTGGTTCGGCTCCCGTTGACGAGTCTCATGAATGCTCGCCTTGTTTGTAA
GAAATGGAGGTCCTTGACTACCACTCCTAGATTCCTCCAAACGAGGAGGG
AGGGTTTGTATCAAAGTCCTTGGTTGTTTCTTTTTGGTGTTGTTAAAGAT
GGCTTTTGCTCTGGCGAGATACATGCACTGGATGTGTCTCTGAATCAATG
GCATAGGATTGATGCTGGTTTTCTCAAAGGGAGGTTTTTGTTCTCTGTGG
CTAGTATACATGACGATATCTTCATAGTTGGAGGATGTTCTAGCTTGACT
AACTTCGGGAATGTGGATAGGAGCTCATTCAAGACGCACAAAGGGGTGGT
AGCATTTAGTCCCTTGACAAAGTCATTGCGTAAAATACCACCTATGAAAT
ATGCTAGATCGGTTCCTCTATTAGGAGTCTCTGAGGTCAGTTTGGATTTT
CCATCTTGTCAAGGTCATCATAGTCAGATGGATAGACGTTTTCCGAGATC
AAGGATTGGCGGGATTTCAGATGTCTATGAGGATCCTCATAAGCTTTCAA
TGAGATGTCATTCCAGATCTTCTCTCAATGAGAGTGAAGCCCTGTCCTTG
CCGAGTAGAAAAGCATACAAATTCCTTAGACAACGAAGTGAACAGTCAAG
CTCAAAGAGTGGTAAAAGATTTGTGTTGATAGCTGTAGGAGGTCTGGGAT
CTTGGGATGAGCCTCTTGACTCTGGAGAAGTATATGACTCCGTATCAAAT
AAATGGACTGAAATTCAGAGGCTGCCTTTTGATTTTGGGGTTGCTTGTTC
TGGAACTGTTTGTGGCAGGATGTTTTATGTTTATTCTGAGACGGACAAGC
TTGCAGCATATGACATCGAACGAGGTTTCTGGATTGCAATTCAAACCACT
ACATTCCCACCTCGTGTACATGAATACTACCCCAAACTTGTATCTTGTAA
TGGCCGTCTTTTAATGCTCTCAGTTTCATGGTGTGAAGGGGACGGTCAAA
TTGGGCGCCGAAACAAGGCTGTTAGAAAATTATGGGAGTTAGATCTCATG
TATCTTACCTGGCGTGAGGTCTCAGTGCATCCTGATGCCCCAATGGACTG
GAATGCGGTTTTTGTGGCAGACAAAAACCTGATTTTTGGGGTAGAGATGT
TCAAAATATTTGGTCAGGTGTTGGATTTTTTCACTGTATGTGACGTGTCT
GACATGGCAAACTGGAACCATATTTCAAGGAATCATGCTACTCAGGAGCT
GGACGCTTCTTCGTGCTTTACCAAATCTATGGTGGTATTACATCTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR015915Kelch-typ_b-propeller
IPR006652Kelch_1
IPR036047F-box-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding