LR48_mrnaVigan01g252600
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Homology
BLAST of LR48_mrnaVigan01g252600 vs. DB:Swiss
Match: AVP_VIGRR (Pyrophosphate-energized vacuolar membrane proton pump OS=Vigna radiata var. radiata OX=3916 PE=1 SV=4) HSP 1 Score: 1440.63 bits (3728), Expect = 0.000e+0 Identity = 742/745 (99.60%), Postives = 745/745 (100.00%), Query Frame = 1 Query: 1 MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACTYDKTKTCKPALATAIFSTISFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKXXXXXXXXXXXXXXXXXXXXXMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMA 2235 MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQAC+YDKTKTCKPALATAIFST+SFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHAR+LGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMA Sbjct: 1 MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACSYDKTKTCKPALATAIFSTVSFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMA 745
BLAST of LR48_mrnaVigan01g252600 vs. DB:Swiss
Match: AVP1_ARATH (Pyrophosphate-energized vacuolar membrane proton pump 1 OS=Arabidopsis thaliana OX=3702 GN=AVP1 PE=1 SV=1) HSP 1 Score: 1285.78 bits (3326), Expect = 0.000e+0 Identity = 657/745 (88.19%), Postives = 703/745 (94.36%), Query Frame = 1 Query: 10 AILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAA---KNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACTYDKTKTCKPALATAIFSTISFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKXXXXXXXXXXXXXXXXXXXXXMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMA 2235 A+LP+L TEIL+P+CAVIGIAF+LFQW +VS+VKL++ AS + A KNGY DYLIEEEEG+ND +VV KCAEIQ AISEGATSFLFTEYKYVG+FM+ FA +IF+FLGSVEGFST + CTYD T+TCKPALATA FSTI+F+LG VTS++SGFLGMKIATYANARTTLEARKGVGKAFI AFRSGAVMGFLLAA+GLLVLYI IN+FKIYYGDDW GLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGK+ERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAE+SCAALVVASISSFG+NH+ TAM YPL++SS+GILVCL+TTLFATDFFEIK VKEIEPALK QL+ISTV+MT+G+A+VS+V LPTSFTIFNFG QK VK+WQLFLCV VGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSF+FAAMYG+AVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRA I TVDVLTPKV IGL+VGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPG LVMLTPL+VG FGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAG SEHA++LGPKGS+ HKAAVIGDTIGDPLKDTSGPSLNILIKLMA Sbjct: 5 ALLPELWTEILVPICAVIGIAFSLFQWYVVSRVKLTSDLGASSSGGANNGKNGYGDYLIEEEEGVNDQSVVAKCAEIQTAISEGATSFLFTEYKYVGVFMIFFAAVIFVFLGSVEGFSTDNKPCTYDTTRTCKPALATAAFSTIAFVLGAVTSVLSGFLGMKIATYANARTTLEARKGVGKAFIVAFRSGAVMGFLLAASGLLVLYITINVFKIYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKIERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAEASCAALVVASISSFGINHDFTAMCYPLLISSMGILVCLITTLFATDFFEIKLVKEIEPALKNQLIISTVIMTVGIAIVSWVGLPTSFTIFNFGTQKVVKNWQLFLCVCVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGIHTVDVLTPKVIIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGCLVMLTPLIVGFFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGVSEHAKSLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMA 749
BLAST of LR48_mrnaVigan01g252600 vs. DB:Swiss
Match: AVP_HORVU (Pyrophosphate-energized vacuolar membrane proton pump OS=Hordeum vulgare OX=4513 PE=2 SV=2) HSP 1 Score: 1278.08 bits (3306), Expect = 0.000e+0 Identity = 655/742 (88.27%), Postives = 697/742 (93.94%), Query Frame = 1 Query: 10 AILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACTYDKTKTCKPALATAIFSTISFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKXXXXXXXXXXXXXXXXXXXXXMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMA 2235 AIL +LGTEILIPVC VIGI FA+ QW +VSKVK++ ++ A AKNGY DYLIEEEEG+NDHNVVVKCAEIQ AISEGATSFLFT Y+YVG+FMV FA +IFLFLGS+EGFST Q CTY K TCKPAL TA+FST SFLLG +TSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLL+++GL+VLYI IN+FK+YYGDDW GLFE+ITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFG+NH+ TAM YPL+VSSVGI+VCLLTTLFATDFFEIKA EIEPALKKQL+IST LMT+GVAV+S++ALP FTIFNFG QK+V +W LF CVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIA+SI+VSF+ AAMYGIA+AALGMLST+ATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRA + VDVL+PKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPL+VG LFGVETLSGVLAG+LVSGVQIAISASNTGGAWDNAKKYIEAG SEHAR+LGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMA Sbjct: 2 AILGELGTEILIPVCGVIGIVFAVAQWFIVSKVKVTPGAASA-AAGAKNGYGDYLIEEEEGLNDHNVVVKCAEIQTAISEGATSFLFTMYQYVGMFMVVFAAIIFLFLGSIEGFSTKGQPCTYSK-GTCKPALYTALFSTASFLLGAITSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLSSSGLVVLYITINVFKMYYGDDWEGLFESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDFTAMCYPLLVSSVGIIVCLLTTLFATDFFEIKAANEIEPALKKQLIISTALMTVGVAVISWLALPAKFTIFNFGAQKEVSNWGLFFCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIYVSFSIAAMYGIAMAALGMLSTMATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGVKVVDVLSPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTLFGVETLSGVLAGALVSGVQIAISASNTGGAWDNAKKYIEAGNSEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMA 741
BLAST of LR48_mrnaVigan01g252600 vs. DB:Swiss
Match: HPPA_LEPIN (Putative K(+)-stimulated pyrophosphate-energized sodium pump OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) OX=189518 GN=hppA PE=3 SV=1) HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0 Identity = 386/683 (56.52%), Postives = 498/683 (72.91%), Query Frame = 1 Query: 217 KCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFL---GSVEGFSTSPQACTYDKTKTCKPALATAIFSTISFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLL---AANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQ-KDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKXXXXXXXXXXXXXXXXXXXXXMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMATSE 2244 K EI +AISEGA +FL EYK + +F+ A+LI L L GS EGF+ I++ I+F+ G + S +SGF+GMKIAT N RT A+ + KAF AF SGAVMGF L A G++VL++ +Y G + L E++ G+GLGGS++ALFGRVGGGIYTKAADVGADLVGKVE+ IPEDDPRNPA IADNVGDNVGD+AGMG+DLFGS AE++CAALV+ + +S L+ + A+LYPL++S+ GI +LT+ A +K +E ALK QL +ST+L+ ++ FV +F + +F + K + W +++ + VGL++G+ IG VTEYYTS++Y PV++VA++ TGAATN+I+GL+LGY S +IP+ + I+I + A MYGIA+AALGM+STIA GL IDAYGP+SDNAGGIAEMA + +R+RTD LDAAGNTTAAIGKGFAIGSAAL SLALF AF++R T+++VL +VF GL+ GAMLP+ F+AMTMKSVG AA+ MVEEVR+QF IPG+MEG KPDY CV IST A+++EMI PG LV+LTP++VG LFGV+TL+GVLAG+LV+GV +AISA+N+GG WDNAKKYIE + G KGSD HKAAV+GDT+GDP KDTSGPS+NILIKLMA + Sbjct: 42 KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLLDNPGS-EGFND-------------------GIYTAIAFVSGALISCISGFIGMKIATAGNVRTAEAAKSSMAKAFRVAFDSGAVMGFGLVGLAILGMIVLFLVFT--GMYPGVEKHFLMESLAGFGLGGSAVALFGRVGGGIYTKAADVGADLVGKVEKGIPEDDPRNPATIADNVGDNVGDVAGMGADLFGSCAEATCAALVIGATAS-ALSGSVDALLYPLLISAFGIPASILTSFLA----RVKEDGNVESALKVQLWVSTLLVA---GIMYFVT--KTFMVDSFEIAGKTITKWDVYISMVVGLFSGMFIGIVTEYYTSHSYKPVREVAEASNTGAATNIIYGLSLGYHSSVIPVILLVITIVTANLLAGMYGIAIAALGMISTIAIGLTIDAYGPVSDNAGGIAEMAELGKEVRDRTDTLDAAGNTTAAIGKGFAIGSAALTSLALFAAFITRTHTTSLEVLNAEVFGGLMFGAMLPFLFTAMTMKSVGKAAVDMVEEVRKQFKEIPGIMEGKNKPDYKRCVDISTSAALREMILPGLLVLLTPILVGYLFGVKTLAGVLAGALVAGVVLAISAANSGGGWDNAKKYIE-------KKAGGKGSDQHKAAVVGDTVGDPFKDTSGPSINILIKLMAITS 685
BLAST of LR48_mrnaVigan01g252600 vs. DB:Swiss
Match: HPPA_LEPIC (Putative K(+)-stimulated pyrophosphate-energized sodium pump OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=hppA PE=3 SV=1) HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0 Identity = 386/683 (56.52%), Postives = 498/683 (72.91%), Query Frame = 1 Query: 217 KCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFL---GSVEGFSTSPQACTYDKTKTCKPALATAIFSTISFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLL---AANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQ-KDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKXXXXXXXXXXXXXXXXXXXXXMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMATSE 2244 K EI +AISEGA +FL EYK + +F+ A+LI L L GS EGF+ I++ I+F+ G + S +SGF+GMKIAT N RT A+ + KAF AF SGAVMGF L A G++VL++ +Y G + L E++ G+GLGGS++ALFGRVGGGIYTKAADVGADLVGKVE+ IPEDDPRNPA IADNVGDNVGD+AGMG+DLFGS AE++CAALV+ + +S L+ + A+LYPL++S+ GI +LT+ A +K +E ALK QL +ST+L+ ++ FV +F + +F + K + W +++ + VGL++G+ IG VTEYYTS++Y PV++VA++ TGAATN+I+GL+LGY S +IP+ + I+I + A MYGIA+AALGM+STIA GL IDAYGP+SDNAGGIAEMA + +R+RTD LDAAGNTTAAIGKGFAIGSAAL SLALF AF++R T+++VL +VF GL+ GAMLP+ F+AMTMKSVG AA+ MVEEVR+QF IPG+MEG KPDY CV IST A+++EMI PG LV+LTP++VG LFGV+TL+GVLAG+LV+GV +AISA+N+GG WDNAKKYIE + G KGSD HKAAV+GDT+GDP KDTSGPS+NILIKLMA + Sbjct: 42 KLLEISSAISEGAMAFLVREYKVISLFIAFMAVLIVLLLDNPGS-EGFND-------------------GIYTAIAFVSGALISCISGFIGMKIATAGNVRTAEAAKSSMAKAFRVAFDSGAVMGFGLVGLAILGMIVLFLVFT--GMYPGVEKHFLMESLAGFGLGGSAVALFGRVGGGIYTKAADVGADLVGKVEKGIPEDDPRNPATIADNVGDNVGDVAGMGADLFGSCAEATCAALVIGATAS-ALSGSVDALLYPLLISAFGIPASILTSFLA----RVKEDGNVESALKVQLWVSTLLVA---GIMYFVT--KTFMVDSFEIAGKTITKWDVYISMVVGLFSGMFIGIVTEYYTSHSYKPVREVAEASNTGAATNIIYGLSLGYHSSVIPVILLVITIVTANLLAGMYGIAIAALGMISTIAIGLTIDAYGPVSDNAGGIAEMAELGKEVRDRTDTLDAAGNTTAAIGKGFAIGSAALTSLALFAAFITRTHTTSLEVLNAEVFGGLMFGAMLPFLFTAMTMKSVGKAAVDMVEEVRKQFKEIPGIMEGKNKPDYKRCVDISTSAALREMILPGLLVLLTPILVGYLFGVKTLAGVLAGALVAGVVLAISAANSGGGWDNAKKYIE-------KKAGGKGSDQHKAAVVGDTVGDPFKDTSGPSINILIKLMAITS 685
BLAST of LR48_mrnaVigan01g252600 vs. DB:Swiss
Match: HPPA_CLOTE (Putative K(+)-stimulated pyrophosphate-energized sodium pump OS=Clostridium tetani (strain Massachusetts / E88) OX=212717 GN=hppA PE=3 SV=1) HSP 1 Score: 560.451 bits (1443), Expect = 0.000e+0 Identity = 331/680 (48.68%), Postives = 432/680 (63.53%), Query Frame = 1 Query: 217 KCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACTYDKTKTCKPALATAIFSTISFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKXX--------XXXXXXXXXXXXXXXXXXXMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLM 2232 + EI I +GA +FL TEYKY+ F+V +++ +F+G +T C F+LG + S+ +G+ GM +AT AN RT AR GKA AF GAVMG + + + +YY +GG E +TG+GLG SS+ALF RVGGGIYTKAADVGADLVGKVE IPEDDPRNPAVIADNVGDNVGD+AGMG+DLF SY S +AL + ++ N E +++PLI+SS+GI+ ++ LF+ K+ + AL I +++ + A++ S TIF + + F VA GL G+IIG +TE YTS+AYS VQ +A+ TG AT +I GLA+G S I + + + S +YGI++AA+GMLST +A+DAYGPI+DNAGGIAEM+ + H +RE TD LD+ GNTTAAIGKGFAIGSAAL +L+LF ++ + ++D+L +GL +GAMLP+ F A+TM+SVG AA +M+EEVRRQF TIPG+MEG A PDY CV IST A+I+EMI PG L ++ P+ +G+L G E L G+LAG+LVSGV + I SN GGAWDNAKKYIE GA G KGS+ HKAAV+GDT+GDP KDTSGPS+NILIKLM Sbjct: 35 RMQEIAGHIHDGAMAFLKTEYKYLTGFIVIVTVILAIFVGW--------------QTAAC-------------FILGAIFSIFAGYFGMNVATKANVRTAEAARHSQGKALNIAFSGGAVMGMSVVGL------GVVGIGIMYY--IFGGNMEFVTGFGLGASSIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSIISALTLGTVVY--ANKE--GVMFPLILSSIGIVASIIGILFSRK----SKAKDPQKALNTGTYIGGIIVIVSAAIL-------SNTIFG--------NLKAFFAVASGLVVGMIIGKITEMYTSDAYSSVQKIANQSETGPATTIISGLAVGMYSTLWPIVLISIGVLVSFFVMGGGSNAMVGLYGISLAAVGMLSTTGLTVAVDAYGPIADNAGGIAEMSELPHEVREITDKLDSVGNTTAAIGKGFAIGSAALTALSLFASYAQATELESIDILNTVTLVGLFIGAMLPFLFGALTMESVGKAANEMIEEVRRQFKTIPGIMEGKATPDYKKCVDISTAAAIREMILPGVLAIVVPVAMGLLLGKEALGGLLAGALVSGVLVGILMSNAGGAWDNAKKYIEGGAH------GGKGSEAHKAAVVGDTVGDPFKDTSGPSMNILIKLM 650
BLAST of LR48_mrnaVigan01g252600 vs. DB:Swiss
Match: HPPA1_MOOTA (Putative K(+)-stimulated pyrophosphate-energized sodium pump OS=Moorella thermoacetica (strain ATCC 39073 / JCM 9320) OX=264732 GN=hppA1 PE=1 SV=1) HSP 1 Score: 554.288 bits (1427), Expect = 0.000e+0 Identity = 337/674 (50.00%), Postives = 438/674 (64.99%), Query Frame = 1 Query: 217 KCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACTYDKTKTCKPALATAIFSTISFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKXXXXXXXXXXXXXXXXXXXXXMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGIL--FGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLM 2232 + EI AI EGA +FL EY+ + F++ LI V GF T ++ +PA A I+++ G + S+ +G++GM++AT AN RT AR A AF G+VMG + GLL L I +FK + G+ LG SS+ALF RVGGGIYTKAADVGADLVGKVE IPEDDPRNPAVIADNVGDNVGD+AGMG+DLF SY S + + +A+ LN L PL+++++GI+ +L F A K AL +++++L +G + + + LP FT + S +F GL AG++IG +TEYYTS Y PV+++A + +TG ATN+I GL+ G S ++PI I I+I S+ FA +YGIA+AA+GMLST T +A+DAYGPI+DNAGGIAEMA + ++R+ TDALD+ GNTTAAIGKGFAIGSAAL +LALF A+ + A IT +D+ PKV GL +G MLP+ F+A+TMK+VG AA +M+EEVRRQF +IPGLMEG A+PDYA CV IST A+IKEMI PG L +L PL VG++ G E L G+LAG+ V+G +A+ +N GGAWDNAKKYIE G G KGS H AAV GDT+GDP KDTSGP++NILIKLM Sbjct: 32 RMQEIAVAIHEGAMAFLMREYRTLIFFVLGMTALIV-----VAGFMTR-------GAESMQPATA------IAYVAGTLCSIGAGYIGMQVATRANVRTANAARHSSNAALDIAFSGGSVMGMAVVGLGLLGLGIINYVFKNP---------SIVNGFALGASSIALFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGSIISGIALAA----ALNIP-NGTLVPLMIAAIGIVSSILGAFFVKTGEGANAQK----ALNTGTMVASILAIVGTFLATRL-LPAHFTAGSM----SYTSTGVFAATIAGLIAGVLIGRITEYYTSGDYEPVKEIAKASQTGTATNIIEGLSTGMLSTVLPILVIVIAIIASYRFAGLYGIAMAAVGMLSTTGTTVAVDAYGPIADNAGGIAEMAELDPKVRKITDALDSVGNTTAAIGKGFAIGSAALTALALFSAYTAAARITAIDLTDPKVVGGLFIGGMLPFLFAALTMKAVGRAAFQMIEEVRRQFKSIPGLMEGKARPDYARCVAISTGAAIKEMIVPGLLAVLVPLAVGLIPGLGKEALGGLLAGATVTGFLMAVMMANAGGAWDNAKKYIEGG------QYGGKGSPAHAAAVNGDTVGDPFKDTSGPAMNILIKLM 658
BLAST of LR48_mrnaVigan01g252600 vs. DB:Swiss
Match: HPPA1_METMA (K(+)-stimulated pyrophosphate-energized sodium pump OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) OX=192952 GN=hppA1 PE=1 SV=1) HSP 1 Score: 530.791 bits (1366), Expect = 2.158e-176 Identity = 343/737 (46.54%), Postives = 457/737 (62.01%), Query Frame = 1 Query: 40 LIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACTYDKTKTCKPALATAIFSTISFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIA-INLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISS---FGLNHELTAMLYPLIVSSVGILVCLLTTLFA-TDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKXXXXXXXXXXXXXXXXXXXXXMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMA 2235 L P+CA+IG+ FA + KN N E EG N ++K +I AI GA +L +Y+ + +F+V AI++ L L P T C F+ G V S +G+ GM AT AN RTT A +G+G AF +F SG VMG + GL L ++ I L IY D L I G+ G SS+ALF RVGGGI+TKAADVGADLVGKVE IPEDDPRNPAVIADNVGDNVGDIAGMG+DL+ SY S A +++A+ ++ F + ++ PL++++VGIL ++ T F T+ E A I A L+ + VL I VV T + +G+ +F GL AG +IG +TE+YTS P VA SC+TG+ATNVI G A G +S + P I+I+I+++F A +YGIA+AA+GML+T+ L++DAYGP++DNAGGIAEM+ +R+ TD LDA GNTTAA+GKGFAIGSAAL +L+LF ++ +T++DV+ P VFIGLI+GAMLP+ FS+MT+ +VG+AA ++V EVRRQF I GLMEG A PDY+ C+ IST +++KEMIPPG L ++ P++VG++ G L G+LAGS+VSG +AI+ SN GG+WDNAKK+IE G G KGSD HKA V GDT+GDP KDT+GP++NILIKLM+ Sbjct: 7 LTPICALIGLIFAGISY--------------------KNVRN-----EGEG----NELIK--KITAAIHGGAMVYLNRQYRAIAVFVVFIAIVLALVL---------PNGVL---TAAC-------------FVFGAVLSATAGYAGMLTATIANGRTTNAATRGIGPAFKVSFASGTVMGMSVVGLGLFGLSLSFIILGNIYTDMDLFTLLNIIAGFSFGASSIALFARVGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDIAGMGADLYESYVGSIIATMLLAASTAAATFPGIPVMNVVMVPLVIAAVGILASVIGTFFVRTNKTESSA---IHMAFNMGLIAAIVLTVIASYVV------TGHLLGGYGLN-------VFFSTVAGLVAGFLIGQITEHYTSYDKKPTLTVAHSCQTGSATNVITGFAKGMESTLWPAVIISIAIYIAFQLAGLYGIAIAAVGMLATLGISLSVDAYGPVADNAGGIAEMSHQKKEVRQITDTLDAVGNTTAAMGKGFAIGSAALTALSLFASYAIAVGLTSIDVMNPNVFIGLIIGAMLPFLFSSMTILAVGNAAGEVVVEVRRQFKEIKGLMEGKADPDYSKCITISTHSALKEMIPPGILAVIAPILVGLVLGAGALGGLLAGSVVSGFMLAITMSNAGGSWDNAKKFIELG------NFGGKGSDAHKAGVTGDTVGDPFKDTAGPAINILIKLMS 665
BLAST of LR48_mrnaVigan01g252600 vs. DB:Swiss
Match: HPPA1_METAC (Putative K(+)-stimulated pyrophosphate-energized sodium pump OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) OX=188937 GN=hppA1 PE=3 SV=2) HSP 1 Score: 523.472 bits (1347), Expect = 1.485e-173 Identity = 341/737 (46.27%), Postives = 455/737 (61.74%), Query Frame = 1 Query: 40 LIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACTYDKTKTCKPALATAIFSTISFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGD-DWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVAS---ISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFA-TDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKXXXXXXXXXXXXXXXXXXXXXMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMA 2235 L P+CA+IG+ FA + KN ++ E ND ++K +I +I GA +L +Y+ + +F+V AI+I L L P T C F+ G V S +G+ GM AT AN RTT A +G+G AF +F SG VMG + GL L ++ + + Y D D + + G+ LG SS+ALF RVGGGI+TKAADVGADLVGKVE IPEDDPRNPAVIADNVGDNVGDIAGMG+DL+ SY S A +++A+ ++F +L PLI+S++GIL ++ T F T+ E A I A L+ + +L I V TS + +G+ +F GL AG +IG +TE+YTS P VA+SC+TG+ATN+I G A G +S + P+ I+I+I+++F + +YGIA+AA+GML+T+ L++DAYGP++DNAGGIAEM+ +R+ TD LDA GNTTAAIGKGFAIGSAAL +LALF ++ ++ +DV+ P VFIGL +GAMLPY FS+MT+ +VG+AA ++V EVRRQF I GLMEG A PDY C+ IST +++KEMIPPG L ++ PL+VG++ G L G+LAGS+ SG IAI+ SN GGAWDNAKKYIE G G KGSD HKA V GDT+GDP KDT+GP++NILIKLM+ Sbjct: 7 LAPICALIGLIFAGISY--------------------KN------VQNEGAGND---LIK--KITASIHGGAMVYLNRQYRAIAVFVVFLAIIIALIL---------PNGAL---TAAC-------------FVFGAVLSATAGYAGMLTATIANGRTTNAATRGIGPAFRVSFASGTVMGMSVVGLGLFGLSLSFIILESVYTDLDLLTIVNIVAGFSLGASSIALFARVGGGIFTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDIAGMGADLYESYVGSILATMLLAASTAATTFPNIPVENVILVPLIISAIGILASIVGTFFVRTNKTESSA---IHMAFNMGLIAAIILTVIASYFV------TSMLLGEYGLN-------VFFATVAGLVAGFLIGQITEHYTSYDRKPTLRVANSCQTGSATNIITGFAKGMESTLWPVVIISIAIYIAFQLSGLYGIAIAAVGMLATLGISLSVDAYGPVADNAGGIAEMSHQKEEVRQITDTLDAVGNTTAAIGKGFAIGSAALTALALFASYGIAVGLSAIDVMNPNVFIGLTIGAMLPYLFSSMTILAVGNAAGEVVVEVRRQFREIAGLMEGKADPDYGKCIAISTHSALKEMIPPGLLAVIAPLLVGLVLGPGALGGLLAGSVASGFMIAITMSNAGGAWDNAKKYIELG------NFGGKGSDAHKAGVTGDTVGDPFKDTAGPAINILIKLMS 665
BLAST of LR48_mrnaVigan01g252600 vs. DB:Swiss
Match: HPPA_CARHZ (K(+)-stimulated pyrophosphate-energized proton pump OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=hppA PE=1 SV=1) HSP 1 Score: 514.227 bits (1323), Expect = 7.371e-170 Identity = 308/693 (44.44%), Postives = 418/693 (60.32%), Query Frame = 1 Query: 217 KCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACTYDKTKTCKPALATAIFSTISFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHELTAML---YPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDV--KSW--QLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKXXXXXXXXXXXXXXXXXXXXXMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASIT------------TVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAT 2238 K EI AI EGA ++L +YK ++ F+ + + +SFL+G + S ++G+ GM T ANARTT ARK + A AFR+G VMG +A GLL ++ I + D I + G S++A F RVGGGIYTKAADVGADLVGKVE IPEDDPRNPAVIADNVGDNVGD AGMG+DLF SY ++ AA+++ +F NH + +L +PL++ + GI+ +++T F ++ ++ P + + IG+ +F+ IF + + + V W ++F+ V GL + IG +TEYYTSN P Q +A++ TG ATN+I G+A+G +S +PI I +I V + A YGIA+AA+GML+T A +A+D++GP++DNAGGIAEMA + IR +TD LDA GNTTAA+ KGFAIGSAAL +LALF A+ A +++ P V +GL +G + + +A+TM+SVG AA M+EEVRRQF IPGLMEG A+PDYA CV IST A+I++MI PG L + PL +G + G + L+G LAG +GV +AI +N GGAWDNAKKYIEAG LG KGSD HKAAV+GDT+GDP KDTSGP++N L+K+ T Sbjct: 38 KMREISQAIFEGAMAYLNRQYK------------------TLIPFALVVFVLLVVGFGYKEGDFGYGLKVGVSFLVGAIASALAGYAGMTSTTKANARTTQAARKSLNAALNVAFRAGGVMGMSVAGLGLL----GVSALYIIFKD-----VHVIDSFAFGASAIAFFARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDTAGMGADLFESYGATTMAAMLLGL--TFAKNHGFSEVLGATFPLLLGAAGIVAAIISTFF------VRTSEDGNPQMA---------LNIGLWSTNFIT-----AIFTYIIAQYVFGSEWAPKIFIAVVSGLVVNVAIGSLTEYYTSNLKPPAQKIAEASTTGPATNIISGIAVGMRSTYLPIIVIVAAIMVGYWAAGFYGIALAAMGMLATAAMVVAVDSFGPVADNAGGIAEMAELGPEIRNKTDKLDAVGNTTAAVAKGFAIGSAALTALALFSAYTDLAKTNPNLQKYLVNGKFDLNITDPWVLVGLFLGGTVAFLVAALTMESVGKAAFDMIEEVRRQFREIPGLMEGKARPDYARCVSISTAAAIRQMIAPGLLAVGAPLAIGFILGFKALTGYLAGVTATGVLLAIYMANAGGAWDNAKKYIEAG------NLGGKGSDTHKAAVVGDTVGDPFKDTSGPAMNPLMKVAGT 675 The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan01g252600 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >LR48_mrnaVigan01g252600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan01g252600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan01g252600; organism=Vigna angularis; type=mRNA; length=5848bpback to top protein sequence of LR48_mrnaVigan01g252600_Va_Jingnong6_v1.1 >LR48_mrnaVigan01g252600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan01g252600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan01g252600_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=937bpback to top mRNA from alignment at Chr_1-CM003371.1:33526336..33532183- Legend: polypeptidestart_codonexonCDSintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.>LR48_mrnaVigan01g252600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan01g252600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan01g252600; organism=Vigna angularis; type=mRNA; length=5848bp; location=Sequence derived from: Chr_1-CM003371.1:33526336..33532183- (Vigna angularisback to top Coding sequence (CDS) from alignment at Chr_1-CM003371.1:33526336..33532183- >LR48_mrnaVigan01g252600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan01g252600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan01g252600; organism=Vigna angularis; type=CDS; length=2814bp; location=Sequence derived from: Chr_1-CM003371.1:33526336..33532183- (Vigna angularisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|