Transcript Overview
| Name | LR48_mrnaVigan04g228600 |
|---|
| Unique Name | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1 |
|---|
| Type | mRNA |
|---|
| Organism | Vigna angularis (Adzuki bean, red mung bean, azuki) |
|---|
| Sequence length | 7519 |
|---|
| Product | hypothetical protein |
|---|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks
Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| LR48_mrnaVigan04g228600 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-protein | Vigna angularis | polypeptide |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1 | Vigna angularis | polypeptide |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32165625..32165627 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-start_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32165625..32165627 | Vigna angularis | start_codon |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32165625..32165680 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32165625..32165680 | Vigna angularis | exon |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166040..32166151 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166040..32166151 | Vigna angularis | exon |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166243..32166331 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166243..32166331 | Vigna angularis | exon |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166634..32166689 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166634..32166689 | Vigna angularis | exon |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166791..32166846 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166791..32166846 | Vigna angularis | exon |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32167395..32167488 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32167395..32167488 | Vigna angularis | exon |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32170567..32170646 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32170567..32170646 | Vigna angularis | exon |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32172118..32172160 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32172118..32172160 | Vigna angularis | exon |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32172447..32172538 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32172447..32172538 | Vigna angularis | exon |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32172964..32173143 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-exon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32172964..32173143 | Vigna angularis | exon |
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32165681..32166039 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32165681..32166039 | Vigna angularis | intron |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166152..32166242 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166152..32166242 | Vigna angularis | intron |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166332..32166633 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166332..32166633 | Vigna angularis | intron |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166690..32166790 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166690..32166790 | Vigna angularis | intron |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166847..32167394 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32166847..32167394 | Vigna angularis | intron |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32167489..32170566 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32167489..32170566 | Vigna angularis | intron |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32170647..32172117 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32170647..32172117 | Vigna angularis | intron |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32172161..32172446 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32172161..32172446 | Vigna angularis | intron |
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32172539..32172963 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-intron-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32172539..32172963 | Vigna angularis | intron |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| CDS2241 | CDS2241_Va_Jingnong6_v1.1 | Vigna angularis | CDS |
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32173141..32173143 | LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1-stop_codon-Chr_4-CM003374.1_Va_Jingnong6_v1.1-1589992784:32173141..32173143 | Vigna angularis | stop_codon |
Homology
BLAST of LR48_mrnaVigan04g228600 vs. DB:Swiss
Match: Y1222_ARATH (Uncharacterized protein At1g32220, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g32220 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.939e-48 Identity = 93/199 (46.73%), Postives = 131/199 (65.83%), Query Frame = 1 Query: 160 TEKLLVLGGNGFVGSHICREALERGLXXXXXXXXXXXXXXXXWAGNVTWYKGNILSTDSLKEALNGVTAVISCVGGFGSNSYMYKINGTANINAIRAASDQGVKRFVYISAADFGVVNYLL-QGYYQGKKAAETELLSKFPYGGVILRPGFIYGTRSVGSMKLPLGVIGSPLETVLQVA----KPLNQIPLIGPLLTPP 741
+E+++VLGGNGFVGS IC+ A+ G+ V S+SRSGR + DSW VTW G++ + E L G TAV+S +GGFG+ M +ING AN+ A+ AA D GV +FV I+ D+ + ++L GY+ GK+ AE ELLSK+P GV+LRPGFIYG R V +++PL ++G PL+ + A +PL +P +L PP
Sbjct: 62 SERVVVLGGNGFVGSAICKAAISNGIEVVSVSRSGRPNFEDSWLDQVTWVTGDVFYLN-WDEVLLGATAVVSTIGGFGNEEQMKRINGEANVTAVNAAKDFGVPKFVLITVHDYNLPPFILSNGYFTGKRNAEAELLSKYPTSGVVLRPGFIYGKRKVNGIEVPLDLVGEPLDKIYDSAERFIRPLRSLPASDLILAPP 259
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR016040 | NAD(P)-binding domain | PFAM | PF13460 | NAD_binding_10 | coord: 61..205
e-value: 4.5E-22
score: 78.7 |
| None | No IPR available | GENE3D | 3.40.50.720 | | coord: 44..273
e-value: 2.3E-41
score: 143.5 |
| IPR036291 | NAD(P)-binding domain superfamily | SUPERFAMILY | 51735 | NAD(P)-binding Rossmann-fold domains | coord: 56..275 |
Sequences
The
following sequences are available for this feature:
mRNA sequence >LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g228600; organism=Vigna angularis; type=mRNA; length=7519bp
ATGAGGACATTGCTTTCGCGCTTGATCCACTCCACGCCTTCCATTTCCAG
GCTCAAGTATGCTTTCTATTCTTTCCAATCGTTATGTTCAGTAATCGTGT
CGTTTTTTGTTGTATACTCAATTCGATTATCTGCTCCTCGttgatatttt
ctattttatattcatataattttttaagtttctgTAACTACCTGGTTGAA
ATGAAATTGAGCTGTACCAAATTAGCAATGCTGTACATGATATGCGATGG
AGGATAGCCGCTACAATTTAATTGCgtcatgagtttaatttttctttatg
gaATTCACTGCGTTAGGTTTCGGTACGAATGTGATTTGAATTTTCTTGTC
TTCATGATTTGTAAATTATTGATTAAGTCGTTTCACGGTGTTATCCTTTT
CTTCTTACCTTGCAGTACAACTGCAGTGTGCGGGAGAAATCTCTGCACAG
ATTCTAATAAAGTTGATGAGCCATTCAAAACTGAAGAAGCAGAGACTGTA
AATGTGCCCCCACCCCCAACAGAAAAGGTATTCTGCCACGATAATTATAT
GTGGAACATTTATTTTTCTACCAGTATCTGGCTTTCTAACCTAAAACTTG
TGTTGGGTTTTATGAAAGTTGCTTGTTTTGGGAGGCAATGGATTTGTCGG
ATCACACATTTGTAGAGAAGCCTTAGAACGTGGCTTATCTGTTGCTAGTA
TTAGCAGGTTTGATGTTTTTTCTCATTGGACAAAACTTGGATGTAATTAT
GTAGGCGTTTTAGGTACTGTTCTTCAATCAGAATTGAAATTTCATCTCGT
TAATCTATTATAATGTTTGCATTAGAGGAATGCATTATTATATAACCACG
TctatgttttcttcttcatatttttttgtattattatcgATCTGTCATTC
TTTATGTATTGTCACTCTAAATTGTCAACtgcttttcatatttattatta
aacatttttcttcttgtaACGTATCTGCATTACCAATAACTCCATGTCTT
ACTTCCCAGGTCTGGCAGGTCATCCCTACATGATTCCTGGGCTGGCAATG
TTACTTGGTATAAAGgtctgtttttttttacttattcttTTTAGCATTTT
CTTCTAGACAAAATCTTAGTGGGACACTACAATAGTCTAACGTGTATATT
GTCTTCCAATAATTAGGGAATATCCTTTCAACTGATTCATTGAAAGAAGC
TCTAAATGGGGTCACTGCTGTTGTAAGTTCCCCTTGTTTTGTTATAATgc
atattaaaaatttagtcACAACTCCTTTCCCCTTTAGTTTATTATAATGC
CTGGTAAATATTTTGCAACTTAGAGGCCCAAAAGCctagtttgttttatt
aattttttgctTCTTGTGCTATTACAACATGTTGCATTAGATTTTGAACA
ATTTGTTTGGTGACATGTTTTGATCAGTTTGTTGAGACTAAATATCTCAC
TTTTATGTCTCTTCATGGGATAAGCTAGGTAAAGTGGTTGGAGCGTAGCC
TTATCGGttttagataatgttgatgataATGATTGTACAGTTTGGTTGCA
AATTATGGTTCTAACAGATTATAAGGAAAGAAACAGAAGTGGGTTTTTGT
GATTGATTACAAGATAATTTGGGTTGAGAGAATTATAGTAACCATCCTGC
ACGCATGGCACTAACTGACCTAATGTGTCTAAATTTTGTTGGTTAGGATA
CAGAATTATACGTATATATGTTCCTTTTTTATGATAAGCCTATTGTGCTA
ACTTGTGTTTCTTTTGTAAGATCTCGTGTGTTGGTGGTTTTGGCTCCAAC
TCATACATGTACAAAATTAATGGGACTGCTAACATCAATGCAATTAGAGC
AGCTTCAGATCAAGGTAATTGAGGAATTCAAACTTCTATTCTTAATAATT
GCTTGTTCAATTCTTACCACTTCTTCTGAAATGACTATCTACCTCAAGTG
TTTGGTACATTCAAGCCATCGGgaatttcttcaaatttaaactCGTTGAG
GAGTTGCTTTATTGATATGAGTTCACAAATAACCAATGTCATTGTCCTAT
ATTCTATTATGCTCATAATCTTGGCTCAAcaatttgtttcttaattttac
atgatattaaattaaatccaaCAGGAACACAGTTTCTTGAAGTGGAGGGT
GTATTGCTTGGTGACCCTGACCCTACCCAAAACGTTAGAATATCTAGCAA
TTTGAGTATTTCCGTTATCTTCATAATTTCCATGATTATTCTTAACATAC
TTTAGGAGTTGTATGACTGCATCCTGATGTTCTCAACAAGGGGAGTTTAA
TAATTGACTTACCACTCTCACTACAAATGCAATGTCAGAATGAATCACTG
TGAGGTAATTTGACTTACCAATTAACTATTTGTATCTCACTGGGTCAGAA
TATGGCTCTCCTTGATCAGGTATAACTTTGACACTCGAATCCATTGGTGT
TTCCCTAAACATAACATTTAACATCCCTGTTCCTTCTAGAATTTCACTAG
CATATTTTCTCTAACATATGACTATCCCTTTTTGGATTATACAACTTTTA
TACCAAGAAAATACCTTAAATGTCCAAGATCTTTTTGTCAGAAACCGTTA
AGCAATGTATTGTTTTAATTGGACAATACCTACCTTATCACTAGCTATGA
TAACAATGTTGTACACATATACAATGAGATAGATACTTAGGTAGGGAGAA
TGATGCTAAAATAGAGAATGAAAAACATCACTTTGTATCATTCCAGATTG
TTGGATGACAGGCCAAAAATGCTGAAATCATGCACAAAGTGATTTCTCGA
GGCCATACAGGGACCTTCGTAGATGAAATACCATATCAGACTACTCCTTC
TAAGCGACAATTCCAGTAAGTTGTTCCATGTATACTTTCTCATCACAATC
ACGGTGTAGAAAGACATTCTTGATGTCAAACTGAAATAGAGTCCAGTGAT
GAATGGTCACAATGGAGAAGAGAAGTTGGATAAATATCATTTTGGCAATA
TGAGAAAGTGAGTATAATCTTATCATAGATTTGTGTGTATTCTTTGGCAA
CCATACAAACATTATAGCGATCAATTTTACCATTAGTCCCTATTATAAGA
GTACTCGGCATTGAAACGACACCCAATAATTGACTTGTTAGTTGGAAGAG
GAACCTCTTCCATGTACCACTGCTTTGAAGGATACAGATCTCTTCCATCA
TTGCTTTGGCCACTCTGGATGAGATAAATCTTCACCTAGAGACTTAGGAA
TAAGAACTAAATACATCAAGgacaaacaaatataaaaaggtATGGAGGAA
AGTCAATGATAATTGAGGTTAGTATAGTGAGGAGAATGGTTACAGGTACA
CCCGGTACACCATATATTAGATATGTGACATCGAAGTCAATGTCCCTTGG
ACCTAAGGAAAAAATTGAGATTCAAGCAAATGAATTACCCATGTGTACCA
CCAAGGCCATAAGATGGTAATGTAGGAGCAACAGGTGACTTGATAAAAGA
CGTCTAGACAATATTAGGTGAACAAGGGGGGTTTCTCATGGAGCTTCCAA
CACTTATTAATGATGTATAATGTGGTGACAATGTTCACATTTGGgacgaa
ttttaaaattacttgtGCAAAAACATCCAAAACTATTACTCTATGATCCA
AAACTAGTACTCTTTTGCCAACTAtgtcatattaattaaaattgatttta
aatgttaaaactagtttttaAAAGCGAAAACCAATTATTAGCTTAAGATT
TATAACCATTTTTAGTTATAGCTGGTCATGTAACCAGTTCTTTCATTTct
acaaaaccaaaatcaattaTGGAAACAAGTTATGGGTTGGTTATAATATT
CACTTGTCATGTatggtaaatatttttaaccatttttaagatatatatCT
GATTATATAATCAGTTTTAGTTACAATCGGTTATATAATCAGTTTTtcat
aaattagaattagttttaCCAAACCAAAATCAATCATGGAAATCATTTAT
ggttttgttattataatattcGCTTGTCATGTAGGGTTAATTTTTATGAT
CATTTTTAATCAACAGGTTATTATAAAACTGGTTAATTGGGATTAAAGTG
AGTTCACTTAAAACCAATTATTATGATAGCCCCTACACAGAAATAGGATA
TGTTAGGCACTGTTGTTCCATTTGGATAGCATATGTTTGATGCATAACAA
TTATAAGCTTTTAGTGAAGAGTCTAGCCTTTGTTGTCATGTGTTTGAGCT
TTCTGTTATAGTTTGTCTATCTTACAAAAAAAGTAAGACATACGCACAAA
CTTTTCTACTACTATTTATAggagagaaaaaacaaaatgagtttgtccat
aagctaaaattagcttatacataaattaatttgtagatATTCCTGTATAG
CGTctctaattcttattttaaacttgaacataaattaattttaacttatg
gaAAAACTCATTCAGTTATtgtgttcttatttttttctcttttagaagTG
TTTATGGAGAAGTTTGTCAAAGAGACCCATAGTGCATTCTTTAGAAAATA
TCctacgttttttttttcgtttgcCAATTTGGGCCATGGCAGGTGTATAG
AATGTTGTATCATTTCATGTAATTGTAGACCAAACTAAGCAGTTGTCTCT
ACACATTTTCTTTgacaatttgtttatatatttatttgttgtgaAACATG
GAATGAGTCAAACGATAGAAGTTGGTTGGtgtttagtttaattaattcaa
aCCTCATCTAAATTATTAGGTGATATTTAGCAACATTCATTGCAAACTCG
TTGCTATTTGCAAGTTTACtagatttagaaataaaaaaactgaaattggt
tttgtatttttgttgtttgactAAGTATTGTTATCATTTCCTTTTGTATA
GTTATCTACCATTTACTGGTTGATTTATTCTTGGTCTTACAGGTGTTAAA
AGATTTGTCTATATCTCTGCTGCTGACTTTGGTGTAGTAAATTACTTACT
GCAGGGGTATTATCAAGGAAAGGTAATATGTCTTACTCTTTATCGTGAGG
ATGTTTTGAGGAATGAATTATTAGTTGATGAATATTGCTAGGAAACATGT
GACGGAGAAGTATGAAAAATTTTACATTCCATGGGTGCATTAACACTTGC
TTCATAGTTTTGACTTGttagttatttgaaatttacaGTTTAGGACAATC
ACCTAGAGCATGATTTAGTAGATTTAATATTGTGATTCAAAAGTTTCGTA
TGATTTCGAGCAAGCCACTTTGTTTTCTATCATCGCTCACCTACATATTG
CATTTATCTAGTTCTTTGTGCTAATGGCATTGTCATTATAGTAATGATCA
ACCAGGTAGCATGAAGATGAAGCAAAATCTTTTCAAGTGTTTTTAAACAA
AAGATCTTGgtaaactaaaatatttcttGGGTGACTGGGTGGGCTCCCAC
TCCCCCATTCATAGAAGGTCCACCTCCagtttatgtatatttattagata
taaCTAGAGGCAAAGTGTTATAGTCAGGTCCAATGCCAAGGCAAATTATC
GAGCTATGGTTGTTGTCTGTCTGGAGCTTGTATTAATCAAACAGTTCCTT
CAGGATTGAAAGTTTGAGGAGGCTGCAAGTTATCACTTATGTGATAATCA
TACCACAATGCATATTGCCTCAAATTCAGTATTCCATGAAAACGATGAAA
TATATTGACATTGATTGTCACTTTTTTAGACGGGGAACTATAAGCTAGTT
TTGTCAATTCCCAATATCATCTTGCTTGGTGCATATGACCTATATCCTTT
AATCTGAGGGGAGTGTTAAAGTCTTGTAGATATGTTAGaatcttatattt
atagtaattaatGATATCAGGATCAATTAGAttgattatataattatgtt
attaacCTAAAATATGGTTACCGggtattatttaattatgttctATTATC
TTTAAATTGCATAGCTCCACCATGGTTTAAACACAGAATTCATCACATGC
CTTCTTTGTTCCTTTAttctaaacatatatataattcttgCCGGCATAAA
TCTACTACTTAAAAACTACATTCTTAAACATATGATTCCACCTTTTTGCT
TCCCTCTAATAGACTTGTTATGTCCTTTGTGCATCCTCCTAATTCTGGAA
GATTCACCTCCTGATGGTTTTACTGATTAATCTCCTGCAATACTCTTCtg
tctttttttctcttcaagtGACAAGCCACTGACATGGTCTTTCCTCGATC
TGAATGAACTTGGATCTTCAGAGTTGGGTCCAAGCCATCGTATGTAATAG
ATCATGTAAAGAGATACGTAATGATTTAAATGGTTGGCTGATTCTAGTCA
TCTATTTGTGATATTCTGAATTCTATTTGTGCTGCGATCTTTAACACGCt
tgcattaaagaaaaaaaaattgtaaatttgatGCTGAaacgttttctatt
tttaatatagtGAAATTTTTATATAGTGTCGTAACTTATGCAGAAAGCTG
CTGAAACAGAGCTCCTGAGCAAATTTCCATATGGAGGTATGTAATAGCAA
TTTAGAGATATCACTTTCACcggtcaaattataatatataaatagttatt
aatttcattttatgagTAGTTGGTTGAGGTTGacttaagtttaaatttta
ttttcttaaaatactattaaagacatttatagtttattttctCGCAGTTT
TgtattctattttaacaaattattgcAGATATTTCAAAGAAAGTATAAAT
CGTTGCTAATGATTCTTGTTACTAGGGAGTATTATGCTCGTATATGATTG
CCCTATTACATGCTTTTTTCAGGAGTAATTCTAAGGCCAGGATTTATTTA
CGGTACTCGAAGTGTTGGGAGTATGAAGTTACCCCTTGGTGTAATTGGAT
CTCCATTGGAGACGGTAAGTTCACGTGCTTCTCTAATACGACAGACATTA
CTTATCTCCTTCGATGATTTGACATTAATTTTAGAGTAAATTATAATAAT
CCCTTGTTAAGTTTTGTGAAATTGTACAAACAGTTCTCTACTTTTTCTAT
CCCTACATTTACCTTTTTTAGTTGGTTAACCCCCCTTTTTACATTACACT
GATTCTTTGAAGTGTTTGGAATAAAAATTAGAGCACGTACACTTATAAGG
GAGGTTATCGTAAGTGTGAAAAATGTGGGGCCTGTCTGTATATCTGTATG
TCTGCAGTGCACATTTATGGCATAACACTTTTTACTTTTTCGGTTTTGAT
TGAACGTCTAATTCCTAAAAATGATTTAGTTTCTTCTGAATATcaactta
ataaatttgttcGTATGTATTTTGACATGACTGCTGTAGGTTCTTCAAGT
TGCTAAACCATTAAACCAGATCCCACTTATTGGACCTCTATTGACACCTC
CTGTCAATGTTACTGCGGTGGCAAAAGTTGCTGTTAGAGCTGCTACTGAT
CCTGTTTTCCCACCGGGGATCATAGATGTCTACGGAATACAACGTTACAG
TCAGcataaatcaaactaa back to topprotein sequence of LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1 >LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=285bp
MRTLLSRLIHSTPSISRLNTTAVCGRNLCTDSNKVDEPFKTEEAETVNVP
PPPTEKLLVLGGNGFVGSHICREALERGLSVASISRSGRSSLHDSWAGNV
TWYKGNILSTDSLKEALNGVTAVISCVGGFGSNSYMYKINGTANINAIRA
ASDQGVKRFVYISAADFGVVNYLLQGYYQGKKAAETELLSKFPYGGVILR
PGFIYGTRSVGSMKLPLGVIGSPLETVLQVAKPLNQIPLIGPLLTPPVNV
TAVAKVAVRAATDPVFPPGIIDVYGIQRYSQHKSN back to topmRNA from alignment at Chr_4-CM003374.1:32165625..32173143+ Legend: polypeptidestart_codonexonCDSintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g228600; organism=Vigna angularis; type=mRNA; length=7519bp; location=Sequence derived from: Chr_4-CM003374.1:32165625..32173143+ (Vigna angularis
ATGAGGACATTGCTTTCGCGCTTGATCCACTCCACGCCTTCCATTTCCAG
GCTCAAGTATGCTTTCTATTCTTTCCAATCGTTATGTTCAGTAATCGTGT
CGTTTTTTGTTGTATACTCAATTCGATTATCTGCTCCTCGttgatatttt
ctattttatattcatataattttttaagtttctgTAACTACCTGGTTGAA
ATGAAATTGAGCTGTACCAAATTAGCAATGCTGTACATGATATGCGATGG
AGGATAGCCGCTACAATTTAATTGCgtcatgagtttaatttttctttatg
gaATTCACTGCGTTAGGTTTCGGTACGAATGTGATTTGAATTTTCTTGTC
TTCATGATTTGTAAATTATTGATTAAGTCGTTTCACGGTGTTATCCTTTT
CTTCTTACCTTGCAGTACAACTGCAGTGTGCGGGAGAAATCTCTGCACAG
ATTCTAATAAAGTTGATGAGCCATTCAAAACTGAAGAAGCAGAGACTGTA
AATGTGCCCCCACCCCCAACAGAAAAGGTATTCTGCCACGATAATTATAT
GTGGAACATTTATTTTTCTACCAGTATCTGGCTTTCTAACCTAAAACTTG
TGTTGGGTTTTATGAAAGTTGCTTGTTTTGGGAGGCAATGGATTTGTCGG
ATCACACATTTGTAGAGAAGCCTTAGAACGTGGCTTATCTGTTGCTAGTA
TTAGCAGGTTTGATGTTTTTTCTCATTGGACAAAACTTGGATGTAATTAT
GTAGGCGTTTTAGGTACTGTTCTTCAATCAGAATTGAAATTTCATCTCGT
TAATCTATTATAATGTTTGCATTAGAGGAATGCATTATTATATAACCACG
TctatgttttcttcttcatatttttttgtattattatcgATCTGTCATTC
TTTATGTATTGTCACTCTAAATTGTCAACtgcttttcatatttattatta
aacatttttcttcttgtaACGTATCTGCATTACCAATAACTCCATGTCTT
ACTTCCCAGGTCTGGCAGGTCATCCCTACATGATTCCTGGGCTGGCAATG
TTACTTGGTATAAAGgtctgtttttttttacttattcttTTTAGCATTTT
CTTCTAGACAAAATCTTAGTGGGACACTACAATAGTCTAACGTGTATATT
GTCTTCCAATAATTAGGGAATATCCTTTCAACTGATTCATTGAAAGAAGC
TCTAAATGGGGTCACTGCTGTTGTAAGTTCCCCTTGTTTTGTTATAATgc
atattaaaaatttagtcACAACTCCTTTCCCCTTTAGTTTATTATAATGC
CTGGTAAATATTTTGCAACTTAGAGGCCCAAAAGCctagtttgttttatt
aattttttgctTCTTGTGCTATTACAACATGTTGCATTAGATTTTGAACA
ATTTGTTTGGTGACATGTTTTGATCAGTTTGTTGAGACTAAATATCTCAC
TTTTATGTCTCTTCATGGGATAAGCTAGGTAAAGTGGTTGGAGCGTAGCC
TTATCGGttttagataatgttgatgataATGATTGTACAGTTTGGTTGCA
AATTATGGTTCTAACAGATTATAAGGAAAGAAACAGAAGTGGGTTTTTGT
GATTGATTACAAGATAATTTGGGTTGAGAGAATTATAGTAACCATCCTGC
ACGCATGGCACTAACTGACCTAATGTGTCTAAATTTTGTTGGTTAGGATA
CAGAATTATACGTATATATGTTCCTTTTTTATGATAAGCCTATTGTGCTA
ACTTGTGTTTCTTTTGTAAGATCTCGTGTGTTGGTGGTTTTGGCTCCAAC
TCATACATGTACAAAATTAATGGGACTGCTAACATCAATGCAATTAGAGC
AGCTTCAGATCAAGGTAATTGAGGAATTCAAACTTCTATTCTTAATAATT
GCTTGTTCAATTCTTACCACTTCTTCTGAAATGACTATCTACCTCAAGTG
TTTGGTACATTCAAGCCATCGGgaatttcttcaaatttaaactCGTTGAG
GAGTTGCTTTATTGATATGAGTTCACAAATAACCAATGTCATTGTCCTAT
ATTCTATTATGCTCATAATCTTGGCTCAAcaatttgtttcttaattttac
atgatattaaattaaatccaaCAGGAACACAGTTTCTTGAAGTGGAGGGT
GTATTGCTTGGTGACCCTGACCCTACCCAAAACGTTAGAATATCTAGCAA
TTTGAGTATTTCCGTTATCTTCATAATTTCCATGATTATTCTTAACATAC
TTTAGGAGTTGTATGACTGCATCCTGATGTTCTCAACAAGGGGAGTTTAA
TAATTGACTTACCACTCTCACTACAAATGCAATGTCAGAATGAATCACTG
TGAGGTAATTTGACTTACCAATTAACTATTTGTATCTCACTGGGTCAGAA
TATGGCTCTCCTTGATCAGGTATAACTTTGACACTCGAATCCATTGGTGT
TTCCCTAAACATAACATTTAACATCCCTGTTCCTTCTAGAATTTCACTAG
CATATTTTCTCTAACATATGACTATCCCTTTTTGGATTATACAACTTTTA
TACCAAGAAAATACCTTAAATGTCCAAGATCTTTTTGTCAGAAACCGTTA
AGCAATGTATTGTTTTAATTGGACAATACCTACCTTATCACTAGCTATGA
TAACAATGTTGTACACATATACAATGAGATAGATACTTAGGTAGGGAGAA
TGATGCTAAAATAGAGAATGAAAAACATCACTTTGTATCATTCCAGATTG
TTGGATGACAGGCCAAAAATGCTGAAATCATGCACAAAGTGATTTCTCGA
GGCCATACAGGGACCTTCGTAGATGAAATACCATATCAGACTACTCCTTC
TAAGCGACAATTCCAGTAAGTTGTTCCATGTATACTTTCTCATCACAATC
ACGGTGTAGAAAGACATTCTTGATGTCAAACTGAAATAGAGTCCAGTGAT
GAATGGTCACAATGGAGAAGAGAAGTTGGATAAATATCATTTTGGCAATA
TGAGAAAGTGAGTATAATCTTATCATAGATTTGTGTGTATTCTTTGGCAA
CCATACAAACATTATAGCGATCAATTTTACCATTAGTCCCTATTATAAGA
GTACTCGGCATTGAAACGACACCCAATAATTGACTTGTTAGTTGGAAGAG
GAACCTCTTCCATGTACCACTGCTTTGAAGGATACAGATCTCTTCCATCA
TTGCTTTGGCCACTCTGGATGAGATAAATCTTCACCTAGAGACTTAGGAA
TAAGAACTAAATACATCAAGgacaaacaaatataaaaaggtATGGAGGAA
AGTCAATGATAATTGAGGTTAGTATAGTGAGGAGAATGGTTACAGGTACA
CCCGGTACACCATATATTAGATATGTGACATCGAAGTCAATGTCCCTTGG
ACCTAAGGAAAAAATTGAGATTCAAGCAAATGAATTACCCATGTGTACCA
CCAAGGCCATAAGATGGTAATGTAGGAGCAACAGGTGACTTGATAAAAGA
CGTCTAGACAATATTAGGTGAACAAGGGGGGTTTCTCATGGAGCTTCCAA
CACTTATTAATGATGTATAATGTGGTGACAATGTTCACATTTGGgacgaa
ttttaaaattacttgtGCAAAAACATCCAAAACTATTACTCTATGATCCA
AAACTAGTACTCTTTTGCCAACTAtgtcatattaattaaaattgatttta
aatgttaaaactagtttttaAAAGCGAAAACCAATTATTAGCTTAAGATT
TATAACCATTTTTAGTTATAGCTGGTCATGTAACCAGTTCTTTCATTTct
acaaaaccaaaatcaattaTGGAAACAAGTTATGGGTTGGTTATAATATT
CACTTGTCATGTatggtaaatatttttaaccatttttaagatatatatCT
GATTATATAATCAGTTTTAGTTACAATCGGTTATATAATCAGTTTTtcat
aaattagaattagttttaCCAAACCAAAATCAATCATGGAAATCATTTAT
ggttttgttattataatattcGCTTGTCATGTAGGGTTAATTTTTATGAT
CATTTTTAATCAACAGGTTATTATAAAACTGGTTAATTGGGATTAAAGTG
AGTTCACTTAAAACCAATTATTATGATAGCCCCTACACAGAAATAGGATA
TGTTAGGCACTGTTGTTCCATTTGGATAGCATATGTTTGATGCATAACAA
TTATAAGCTTTTAGTGAAGAGTCTAGCCTTTGTTGTCATGTGTTTGAGCT
TTCTGTTATAGTTTGTCTATCTTACAAAAAAAGTAAGACATACGCACAAA
CTTTTCTACTACTATTTATAggagagaaaaaacaaaatgagtttgtccat
aagctaaaattagcttatacataaattaatttgtagatATTCCTGTATAG
CGTctctaattcttattttaaacttgaacataaattaattttaacttatg
gaAAAACTCATTCAGTTATtgtgttcttatttttttctcttttagaagTG
TTTATGGAGAAGTTTGTCAAAGAGACCCATAGTGCATTCTTTAGAAAATA
TCctacgttttttttttcgtttgcCAATTTGGGCCATGGCAGGTGTATAG
AATGTTGTATCATTTCATGTAATTGTAGACCAAACTAAGCAGTTGTCTCT
ACACATTTTCTTTgacaatttgtttatatatttatttgttgtgaAACATG
GAATGAGTCAAACGATAGAAGTTGGTTGGtgtttagtttaattaattcaa
aCCTCATCTAAATTATTAGGTGATATTTAGCAACATTCATTGCAAACTCG
TTGCTATTTGCAAGTTTACtagatttagaaataaaaaaactgaaattggt
tttgtatttttgttgtttgactAAGTATTGTTATCATTTCCTTTTGTATA
GTTATCTACCATTTACTGGTTGATTTATTCTTGGTCTTACAGGTGTTAAA
AGATTTGTCTATATCTCTGCTGCTGACTTTGGTGTAGTAAATTACTTACT
GCAGGGGTATTATCAAGGAAAGGTAATATGTCTTACTCTTTATCGTGAGG
ATGTTTTGAGGAATGAATTATTAGTTGATGAATATTGCTAGGAAACATGT
GACGGAGAAGTATGAAAAATTTTACATTCCATGGGTGCATTAACACTTGC
TTCATAGTTTTGACTTGttagttatttgaaatttacaGTTTAGGACAATC
ACCTAGAGCATGATTTAGTAGATTTAATATTGTGATTCAAAAGTTTCGTA
TGATTTCGAGCAAGCCACTTTGTTTTCTATCATCGCTCACCTACATATTG
CATTTATCTAGTTCTTTGTGCTAATGGCATTGTCATTATAGTAATGATCA
ACCAGGTAGCATGAAGATGAAGCAAAATCTTTTCAAGTGTTTTTAAACAA
AAGATCTTGgtaaactaaaatatttcttGGGTGACTGGGTGGGCTCCCAC
TCCCCCATTCATAGAAGGTCCACCTCCagtttatgtatatttattagata
taaCTAGAGGCAAAGTGTTATAGTCAGGTCCAATGCCAAGGCAAATTATC
GAGCTATGGTTGTTGTCTGTCTGGAGCTTGTATTAATCAAACAGTTCCTT
CAGGATTGAAAGTTTGAGGAGGCTGCAAGTTATCACTTATGTGATAATCA
TACCACAATGCATATTGCCTCAAATTCAGTATTCCATGAAAACGATGAAA
TATATTGACATTGATTGTCACTTTTTTAGACGGGGAACTATAAGCTAGTT
TTGTCAATTCCCAATATCATCTTGCTTGGTGCATATGACCTATATCCTTT
AATCTGAGGGGAGTGTTAAAGTCTTGTAGATATGTTAGaatcttatattt
atagtaattaatGATATCAGGATCAATTAGAttgattatataattatgtt
attaacCTAAAATATGGTTACCGggtattatttaattatgttctATTATC
TTTAAATTGCATAGCTCCACCATGGTTTAAACACAGAATTCATCACATGC
CTTCTTTGTTCCTTTAttctaaacatatatataattcttgCCGGCATAAA
TCTACTACTTAAAAACTACATTCTTAAACATATGATTCCACCTTTTTGCT
TCCCTCTAATAGACTTGTTATGTCCTTTGTGCATCCTCCTAATTCTGGAA
GATTCACCTCCTGATGGTTTTACTGATTAATCTCCTGCAATACTCTTCtg
tctttttttctcttcaagtGACAAGCCACTGACATGGTCTTTCCTCGATC
TGAATGAACTTGGATCTTCAGAGTTGGGTCCAAGCCATCGTATGTAATAG
ATCATGTAAAGAGATACGTAATGATTTAAATGGTTGGCTGATTCTAGTCA
TCTATTTGTGATATTCTGAATTCTATTTGTGCTGCGATCTTTAACACGCt
tgcattaaagaaaaaaaaattgtaaatttgatGCTGAaacgttttctatt
tttaatatagtGAAATTTTTATATAGTGTCGTAACTTATGCAGAAAGCTG
CTGAAACAGAGCTCCTGAGCAAATTTCCATATGGAGGTATGTAATAGCAA
TTTAGAGATATCACTTTCACcggtcaaattataatatataaatagttatt
aatttcattttatgagTAGTTGGTTGAGGTTGacttaagtttaaatttta
ttttcttaaaatactattaaagacatttatagtttattttctCGCAGTTT
TgtattctattttaacaaattattgcAGATATTTCAAAGAAAGTATAAAT
CGTTGCTAATGATTCTTGTTACTAGGGAGTATTATGCTCGTATATGATTG
CCCTATTACATGCTTTTTTCAGGAGTAATTCTAAGGCCAGGATTTATTTA
CGGTACTCGAAGTGTTGGGAGTATGAAGTTACCCCTTGGTGTAATTGGAT
CTCCATTGGAGACGGTAAGTTCACGTGCTTCTCTAATACGACAGACATTA
CTTATCTCCTTCGATGATTTGACATTAATTTTAGAGTAAATTATAATAAT
CCCTTGTTAAGTTTTGTGAAATTGTACAAACAGTTCTCTACTTTTTCTAT
CCCTACATTTACCTTTTTTAGTTGGTTAACCCCCCTTTTTACATTACACT
GATTCTTTGAAGTGTTTGGAATAAAAATTAGAGCACGTACACTTATAAGG
GAGGTTATCGTAAGTGTGAAAAATGTGGGGCCTGTCTGTATATCTGTATG
TCTGCAGTGCACATTTATGGCATAACACTTTTTACTTTTTCGGTTTTGAT
TGAACGTCTAATTCCTAAAAATGATTTAGTTTCTTCTGAATATcaactta
ataaatttgttcGTATGTATTTTGACATGACTGCTGTAGGTTCTTCAAGT
TGCTAAACCATTAAACCAGATCCCACTTATTGGACCTCTATTGACACCTC
CTGTCAATGTTACTGCGGTGGCAAAAGTTGCTGTTAGAGCTGCTACTGAT
CCTGTTTTCCCACCGGGGATCATAGATGTCTACGGAATACAACGTTACAG
TCAGcataaatcaaactaa back to topCoding sequence (CDS) from alignment at Chr_4-CM003374.1:32165625..32173143+ >LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g228600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g228600; organism=Vigna angularis; type=CDS; length=858bp; location=Sequence derived from: Chr_4-CM003374.1:32165625..32173143+ (Vigna angularis
ATGAGGACATTGCTTTCGCGCTTGATCCACTCCACGCCTTCCATTTCCAG
GCTCAATACAACTGCAGTGTGCGGGAGAAATCTCTGCACAGATTCTAATA
AAGTTGATGAGCCATTCAAAACTGAAGAAGCAGAGACTGTAAATGTGCCC
CCACCCCCAACAGAAAAGTTGCTTGTTTTGGGAGGCAATGGATTTGTCGG
ATCACACATTTGTAGAGAAGCCTTAGAACGTGGCTTATCTGTTGCTAGTA
TTAGCAGGTCTGGCAGGTCATCCCTACATGATTCCTGGGCTGGCAATGTT
ACTTGGTATAAAGGGAATATCCTTTCAACTGATTCATTGAAAGAAGCTCT
AAATGGGGTCACTGCTGTTATCTCGTGTGTTGGTGGTTTTGGCTCCAACT
CATACATGTACAAAATTAATGGGACTGCTAACATCAATGCAATTAGAGCA
GCTTCAGATCAAGGTGTTAAAAGATTTGTCTATATCTCTGCTGCTGACTT
TGGTGTAGTAAATTACTTACTGCAGGGGTATTATCAAGGAAAGAAAGCTG
CTGAAACAGAGCTCCTGAGCAAATTTCCATATGGAGGAGTAATTCTAAGG
CCAGGATTTATTTACGGTACTCGAAGTGTTGGGAGTATGAAGTTACCCCT
TGGTGTAATTGGATCTCCATTGGAGACGGTTCTTCAAGTTGCTAAACCAT
TAAACCAGATCCCACTTATTGGACCTCTATTGACACCTCCTGTCAATGTT
ACTGCGGTGGCAAAAGTTGCTGTTAGAGCTGCTACTGATCCTGTTTTCCC
ACCGGGGATCATAGATGTCTACGGAATACAACGTTACAGTCAGcataaat
caaactaa back to top
Annotated Terms
The
following terms have been associated with
this mRNA:
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