LR48_mrnaVigan04g239200
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Homology
BLAST of LR48_mrnaVigan04g239200 vs. DB:Swiss
Match: 1A12_CUCMA (1-aminocyclopropane-1-carboxylate synthase CMA101 OS=Cucurbita maxima OX=3661 GN=ACS2 PE=2 SV=1) HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0 Identity = 308/436 (70.64%), Postives = 359/436 (82.34%), Query Frame = 1 Query: 1 MLSRKTTEDSHGQDSSYFLGWQEYDKNPYHHIRNPTGIIQMGLAENQLSFDLLESWLERNPEIVGMKQDGVSVFRELALFQDYHGLPALKKELVEFMSKIRGNRIKFAPEKLVLTAGATLANEIMMFCLAHPGEAFILPTPYYPGFDRDLKWRTGVEIVPLHCSSSNGFRITSSALKQAYQKAQKLNLKVKGVLVTNPSNPLGTTMTKAELNLLIDFAIEKNIHIISDEIYSGTVFDPPEFVSIMEVVNERTSSINNIRNRTHIIYSLSKDLGVPGFRVGMIYSENETVVAAATKMSSFGLVSSQTQHLVANVLKDKKFAFNYIEENQRRVKRRMEMLVCGLRNAGIQCLKSNAGLFCWVDMRHLLSSASFEAEKELWMMILCHVGLNISPGSSCHCSEPGWFRVCFANMSEATLKVAMRRMKAFIDSTVSVVNDN 1308 MLS K T +SHGQDSSYFLGW+ Y+ NP+HH NP GIIQMGLAENQLSFDLLESWL +NP+ K+DG S+FRELALFQDYHGLPA KK LVEFM++IRGN++ F +VLTAGAT ANE +MFCLA G+AF+LPTPYYPGFDRDLKWRTGVEIVP+HC+SSNGF+IT SAL+QAY+ AQ NL+VKGVLVTNPSNPLGTTM + ELNL+ DF K IH+ISDEIYSGTVF P FVS MEV+ ER+S + R HI+YSLSKDLG+PGFRVG IYS ++ VVAAATKMSSFGLVSSQTQ+L++ +L DKKF +YI ENQ+R+K+R +MLV GL+ AGI CL SNAGLFCWVDMRHLL S FE+E ELW I+ VGLNISPGSSCHC+EPGWFRVCFANMSE+TLK+A+RR+K+F+ S N Sbjct: 3 MLSTKATCNSHGQDSSYFLGWEAYENNPFHHTSNPNGIIQMGLAENQLSFDLLESWLSKNPDAASFKRDGKSIFRELALFQDYHGLPAFKKALVEFMAEIRGNKVSFEANNIVLTAGATSANETLMFCLAEAGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITQSALEQAYKDAQTRNLRVKGVLVTNPSNPLGTTMNRDELNLVFDFITSKGIHLISDEIYSGTVFGSPGFVSAMEVLKERSSEDEEVWKRVHIVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQYLLSAMLSDKKFTISYISENQKRLKQRQKMLVSGLQKAGINCLDSNAGLFCWVDMRHLLESDKFESELELWKKIVYEVGLNISPGSSCHCTEPGWFRVCFANMSESTLKLAVRRLKSFVTELRSTTTSN 438
BLAST of LR48_mrnaVigan04g239200 vs. DB:Swiss
Match: 1A13_SOLLC (1-aminocyclopropane-1-carboxylate synthase 3 OS=Solanum lycopersicum OX=4081 GN=ACS3 PE=1 SV=1) HSP 1 Score: 646.351 bits (1666), Expect = 0.000e+0 Identity = 306/430 (71.16%), Postives = 360/430 (83.72%), Query Frame = 1 Query: 1 MLSRKTTEDSHGQDSSYFLGWQEYDKNPYHHIRNPTGIIQMGLAENQLSFDLLESWLERNPEIVGMKQDGVSVFRELALFQDYHGLPALKKELVEFMSKIRGNRIKFAPEKLVLTAGATLANEIMMFCLAHPGEAFILPTPYYPGFDRDLKWRTGVEIVPLHCSSSNGFRITSSALKQAYQKAQKLNLKVKGVLVTNPSNPLGTTMTKAELNLLIDFAIEKNIHIISDEIYSGTVFDPPEFVSIMEVVNERTSSINNIRNRTHIIYSLSKDLGVPGFRVGMIYSENETVVAAATKMSSFGLVSSQTQHLVANVLKDKKFAFNYIEENQRRVKRRMEMLVCGLRNAGIQCLKSNAGLFCWVDMRHLLSSASFEAEKELWMMILCHVGLNISPGSSCHCSEPGWFRVCFANMSEATLKVAMRRMKAFIDSTV 1290 +LS K T +SHGQDSSYFLGWQEY+KNPY I+NP GIIQMGLAENQLSFDLLESWL +NP+ G K++G S+FRELALFQDYHGLPA K + +FMS+IRGNR+ F LVLTAGAT ANE +MFCLA+ G+AF+LPTPYYPGFDRDLKWRTG EIVP+HCSSSNGFRIT SAL++AY A+K NLKVKGVLVTNPSNPLGTT+ + EL LL+ F EK IH+ISDEIYSGTVF+ P FVS+MEV+ E+ + R HI+YSLSKDLG+PGFR+G IYS +E VV+AATKMSSFGLVSSQTQ+L++ +L DKKF YI ENQ+R+K+R MLV GL++AGI CL+SNAGLFCWVDMRHLLSS +F+AE +LW I+ VGLNISPGSSCHC+EPGWFRVCFANMSE TL +AMRR+K F++ST Sbjct: 3 LLSEKATCNSHGQDSSYFLGWQEYEKNPYDEIQNPKGIIQMGLAENQLSFDLLESWLAQNPDAAGFKRNGESIFRELALFQDYHGLPAFKNAMTKFMSEIRGNRVSFDSNNLVLTAGATSANETLMFCLANQGDAFLLPTPYYPGFDRDLKWRTGAEIVPIHCSSSNGFRITESALEEAYLDAKKRNLKVKGVLVTNPSNPLGTTLNRNELELLLTFIDEKGIHLISDEIYSGTVFNSPGFVSVMEVLIEKNYMKTRVWERVHIVYSLSKDLGLPGFRIGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSCMLSDKKFTKKYISENQKRLKKRHAMLVKGLKSAGINCLESNAGLFCWVDMRHLLSSNNFDAEMDLWKKIVYDVGLNISPGSSCHCTEPGWFRVCFANMSEDTLDLAMRRIKDFVESTA 432
BLAST of LR48_mrnaVigan04g239200 vs. DB:Swiss
Match: 1A19_ARATH (1-aminocyclopropane-1-carboxylate synthase 9 OS=Arabidopsis thaliana OX=3702 GN=ACS9 PE=1 SV=1) HSP 1 Score: 645.58 bits (1664), Expect = 0.000e+0 Identity = 302/430 (70.23%), Postives = 362/430 (84.19%), Query Frame = 1 Query: 4 LSRKTTEDSHGQDSSYFLGWQEYDKNPYHHIRNPTGIIQMGLAENQLSFDLLESWLERNPEIVGMKQDGVSVFRELALFQDYHGLPALKKELVEFMSKIRGNRIKFAPEKLVLTAGATLANEIMMFCLAHPGEAFILPTPYYPGFDRDLKWRTGVEIVPLHCSSSNGFRITSSALKQAYQKAQKLNLKVKGVLVTNPSNPLGTTMTKAELNLLIDFAIEKNIHIISDEIYSGTVFDPPEFVSIMEVVNERTSSINNIRNRTHIIYSLSKDLGVPGFRVGMIYSENETVVAAATKMSSFGLVSSQTQHLVANVLKDKKFAFNYIEENQRRVKRRMEMLVCGLRNAGIQCLKSNAGLFCWVDMRHLLSSASFEAEKELWMMILCHVGLNISPGSSCHCSEPGWFRVCFANMSEATLKVAMRRMKAFIDSTVS 1293 LSRK T ++HGQDSSYFLGW+EY+KNPY I+NP GIIQMGLAENQL FDL+E+WL +NP+ G+K+DG S+F+ELALFQDYHGLP KK L EFM +IRGNR+ F P K+VL AG+T ANE +MFCLA PG+AF+LPTPYYPGFDRDLKWRTG EIVP+HCSSSNGF+IT SAL+QAYQ+AQKL+LKVKGVLVTNPSNPLGT +T+ ELNLL+DF KNIH+ISDEIYSGTVF +FVS+M+V+ ++ + + R HI+YSLSKDLG+PGFRVG IYS +E VV+AATKMSSFGLVSSQTQ+L++ +L DKKF Y++ENQ+R+K R + LV GL AGI CLKSNAGLFCWVDMRHLL + +FEAE ELW I+ V LNISPGSSCHC+EPGWFRVCFANMSE TL +AM+R+K +++ST S Sbjct: 4 LSRKVTSNAHGQDSSYFLGWEEYEKNPYDEIKNPNGIIQMGLAENQLCFDLIETWLAKNPDAAGLKKDGQSIFKELALFQDYHGLPEFKKALAEFMEEIRGNRVTFDPSKIVLAAGSTSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGAEIVPIHCSSSNGFQITESALQQAYQQAQKLDLKVKGVLVTNPSNPLGTMLTRRELNLLVDFITSKNIHLISDEIYSGTVFGFEQFVSVMDVLKDKNLENSEVSKRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKFTSTYLDENQKRLKIRQKKLVSGLEAAGITCLKSNAGLFCWVDMRHLLDTNTFEAELELWKKIVYDVKLNISPGSSCHCTEPGWFRVCFANMSEDTLDLAMKRLKEYVESTDS 433
BLAST of LR48_mrnaVigan04g239200 vs. DB:Swiss
Match: 1A111_ARATH (1-aminocyclopropane-1-carboxylate synthase 11 OS=Arabidopsis thaliana OX=3702 GN=ACS11 PE=1 SV=1) HSP 1 Score: 644.81 bits (1662), Expect = 0.000e+0 Identity = 290/437 (66.36%), Postives = 359/437 (82.15%), Query Frame = 1 Query: 1 MLSRKTTEDSHGQDSSYFLGWQEYDKNPYHHIRNPTGIIQMGLAENQLSFDLLESWLERNPEIVGMKQDGVSVFRELALFQDYHGLPALKKELVEFMSKIRGNRIKFAPEKLVLTAGATLANEIMMFCLAHPGEAFILPTPYYPGFDRDLKWRTGVEIVPLHCSSSNGFRITSSALKQAYQKAQKLNLKVKGVLVTNPSNPLGTTMTKAELNLLIDFAIEKNIHIISDEIYSGTVFDPPEFVSIMEVVNERTSSINNIRNRTHIIYSLSKDLGVPGFRVGMIYSENETVVAAATKMSSFGLVSSQTQHLVANVLKDKKFAFNYIEENQRRVKRRMEMLVCGLRNAGIQCLKSNAGLFCWVDMRHLLSSASFEAEKELWMMILCHVGLNISPGSSCHCSEPGWFRVCFANMSEATLKVAMRRMKAFIDSTVSVVNDNG 1311 MLS K DSHGQDSSYFLGWQEY+KNP+H N +GI+QMGLAENQLSFDL+E WLE +PE++G+K++ SVFR+LALFQDYHGLPA K + +FM KIR N++KF K+VLTAG+T ANE +MFCLA+PG+AF++P PYYPGFDRDLKWRTGVEIVP+HC SSNG++IT AL+ AY++A K NL VKGVL+TNPSNPLGT+ T+ EL+LL+ F K IH++SDEIYSGTVFD PEF S++EV ++ ++ + H++YSLSKDLG+PGFRVG+IYS NE VV+AATKMSSFGL+SSQTQHL+AN+L D++F NY+EEN++R++ R + LV GL+ AGI CLKSNAGLFCWVD+RHLL S +FEAE LW I+C VGLNISPGSSCHC EPGWFRVCFANMS+ T++VAM R+K F+D N+NG Sbjct: 1 MLSSKVVGDSHGQDSSYFLGWQEYEKNPFHESFNTSGIVQMGLAENQLSFDLIEKWLEEHPEVLGLKKNDESVFRQLALFQDYHGLPAFKDAMAKFMGKIRENKVKFDTNKMVLTAGSTSANETLMFCLANPGDAFLIPAPYYPGFDRDLKWRTGVEIVPIHCVSSNGYKITEDALEDAYERALKHNLNVKGVLITNPSNPLGTSTTREELDLLLTFTSTKKIHMVSDEIYSGTVFDSPEFTSVLEVAKDKNMGLD---GKIHVVYSLSKDLGLPGFRVGLIYSNNEKVVSAATKMSSFGLISSQTQHLLANLLSDERFTTNYLEENKKRLRERKDRLVSGLKEAGISCLKSNAGLFCWVDLRHLLKSNTFEAEHSLWTKIVCEVGLNISPGSSCHCDEPGWFRVCFANMSDQTMEVAMDRVKGFVD------NNNG 428
BLAST of LR48_mrnaVigan04g239200 vs. DB:Swiss
Match: 1A1C_MALDO (1-aminocyclopropane-1-carboxylate synthase OS=Malus domestica OX=3750 GN=ACS-1 PE=1 SV=2) HSP 1 Score: 644.425 bits (1661), Expect = 0.000e+0 Identity = 298/438 (68.04%), Postives = 356/438 (81.28%), Query Frame = 1 Query: 1 MLSRKTTEDSHGQDSSYFLGWQEYDKNPYHHIRNPTGIIQMGLAENQLSFDLLESWLERNPEIVGMKQDGVSVFRELALFQDYHGLPALKKELVEFMSKIRGNRIKFAPEKLVLTAGATLANEIMMFCLAHPGEAFILPTPYYPGFDRDLKWRTGVEIVPLHCSSSNGFRITSSALKQAYQKAQKLNLKVKGVLVTNPSNPLGTTMTKAELNLLIDFAIEKNIHIISDEIYSGTVFDPPEFVSIMEVVNERTSSINN-IRNRTHIIYSLSKDLGVPGFRVGMIYSENETVVAAATKMSSFGLVSSQTQHLVANVLKDKKFAFNYIEENQRRVKRRMEMLVCGLRNAGIQCLKSNAGLFCWVDMRHLLSSASFEAEKELWMMILCHVGLNISPGSSCHCSEPGWFRVCFANMSEATLKVAMRRMKAFIDSTVSVVNDNG 1311 MLSR T +SHGQDSSYFLGWQEY+KNPYH + N GIIQMGLAENQL FDLLESWL +NPE K++G S+F ELALFQDYHGLPA KK +V+FM++IRGN++ F P LVLTAGAT ANE +FCLA PGEA ++PTPYYPGFDRDLKWRTGVEIVP+HC+SSNGF+IT +AL++AYQ+A+K NL+VKGVLVTNPSNPLGTTMT+ EL LL+ F +K IH+ISDEIYSGT F P F+S+MEV+ +R N+ + R H++YSLSKDLG+PGFRVG IYS ++ VVAAATKMSSFGLVSSQTQHL++ +L DKK NYI EN +R+K+R + LV GL+ +GI CL NAGLFCWVDMRHLL S +FEAE ELW I+ V LNISPGSSCHC+EPGWFRVCFAN+ E TL +AM+R+KAF+ +V NG Sbjct: 3 MLSRNATFNSHGQDSSYFLGWQEYEKNPYHEVHNTNGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAFVGEYYNVPEVNG 440
BLAST of LR48_mrnaVigan04g239200 vs. DB:Swiss
Match: 1A18_ARATH (1-aminocyclopropane-1-carboxylate synthase 8 OS=Arabidopsis thaliana OX=3702 GN=ACS8 PE=1 SV=1) HSP 1 Score: 644.04 bits (1660), Expect = 0.000e+0 Identity = 294/427 (68.85%), Postives = 356/427 (83.37%), Query Frame = 1 Query: 1 MLSRKTTEDSHGQDSSYFLGWQEYDKNPYHHIRNPTGIIQMGLAENQLSFDLLESWLERNPEIVGMKQDGVSVFRELALFQDYHGLPALKKELVEFMSKIRGNRIKFAPEKLVLTAGATLANEIMMFCLAHPGEAFILPTPYYPGFDRDLKWRTGVEIVPLHCSSSNGFRITSSALKQAYQKAQKLNLKVKGVLVTNPSNPLGTTMTKAELNLLIDFAIEKNIHIISDEIYSGTVFDPPEFVSIMEVVNERTSSINNIRNRTHIIYSLSKDLGVPGFRVGMIYSENETVVAAATKMSSFGLVSSQTQHLVANVLKDKKFAFNYIEENQRRVKRRMEMLVCGLRNAGIQCLKSNAGLFCWVDMRHLLSSASFEAEKELWMMILCHVGLNISPGSSCHCSEPGWFRVCFANMSEATLKVAMRRMKAFID 1281 +LS+K + ++HGQDSSYF GW+EY+KNPY I+NP GIIQMGLAENQLSFDL+ESWL +NP+ +++G S+FRELALFQDYHGLP+ K + +FMS+ RGNR+ F P KLVLTAGAT ANE +MFCLA PG+AF+LPTPYYPGFDRDLKWRTG EIVP+ C S+NGFRIT AL++AY++AQKLNLKVKGVL+TNPSNPLGTT T+ ELN L+DF K IH+ISDEIYSGTVF P F+S+MEV+ +R ++ +R HI+YSLSKDLG+PGFRVG+IYS ++ VV+AATKMSSFGL+SSQTQ+L++ +L DK F NY+EENQ R+K R + LV GL AGI+CLKSNAGLFCWVDMRHLL S +FEAE ELW I+ V LNISPGSSCHC+EPGWFRVCFAN+SE TLKVA+ R+K F+D Sbjct: 3 LLSKKASCNTHGQDSSYFWGWEEYEKNPYDEIKNPDGIIQMGLAENQLSFDLIESWLAKNPDAANFQREGQSIFRELALFQDYHGLPSFKNAMADFMSENRGNRVSFNPNKLVLTAGATPANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRTGAEIVPIQCKSANGFRITKVALEEAYEQAQKLNLKVKGVLITNPSNPLGTTTTRTELNHLLDFISRKKIHLISDEIYSGTVFTNPGFISVMEVLKDRKLENTDVFDRVHIVYSLSKDLGLPGFRVGVIYSNDDFVVSAATKMSSFGLISSQTQYLLSALLSDKTFTKNYLEENQIRLKNRHKKLVSGLEAAGIECLKSNAGLFCWVDMRHLLKSNTFEAEIELWKKIVYEVKLNISPGSSCHCNEPGWFRVCFANLSEETLKVALDRLKRFVD 429
BLAST of LR48_mrnaVigan04g239200 vs. DB:Swiss
Match: 1A15_ARATH (1-aminocyclopropane-1-carboxylate synthase 5 OS=Arabidopsis thaliana OX=3702 GN=ACS5 PE=1 SV=1) HSP 1 Score: 634.024 bits (1634), Expect = 0.000e+0 Identity = 292/428 (68.22%), Postives = 359/428 (83.88%), Query Frame = 1 Query: 4 LSRKTTEDSHGQDSSYFLGWQEYDKNPYHHIRNPTGIIQMGLAENQLSFDLLESWLERNPEIVGMKQDGVSVFRELALFQDYHGLPALKKELVEFMSKIRGNRIKFAPEKLVLTAGATLANEIMMFCLAHPGEAFILPTPYYPGFDRDLKWRTGVEIVPLHCSSSNGFRITSSALKQAYQKAQKLNLKVKGVLVTNPSNPLGTTMTKAELNLLIDFAIEKNIHIISDEIYSGTVFDPPEFVSIMEVVNERTSSINNIRNRTHIIYSLSKDLGVPGFRVGMIYSENETVVAAATKMSSFGLVSSQTQHLVANVLKDKKFAFNYIEENQRRVKRRMEMLVCGLRNAGIQCLKSNAGLFCWVDMRHLLSSASFEAEKELWMMILCHVGLNISPGSSCHCSEPGWFRVCFANMSEATLKVAMRRMKAFIDST 1287 LS K T + HGQDSSYFLGW+EY+KNPY I+NP G+IQMGLAENQL FDL+ESWL +NP+ +K++G S+FRELALFQDYHG+P KK + EFM +IRGNR+ F P+K+VL AG+T ANE +MFCLA PG+AF+LPTPYYPGFDRDLKWRTG EIVP+HCSSSNGF+IT SAL+QAYQ+AQKL+LKVKGVLVTNPSNPLGT +T+ ELNLL+DF KNIH+ISDEIYSGT+F +F+S+M+V+ ++ + R H++YSLSKDLG+PGFRVG IYS +E +V+AATKMSSFGLVSSQTQ+L++ +L DKKF Y+EENQ+R+K R LV GL +AGI CL+SNAGLFCWVDMRHLL + +FEAE +LW I+ +V LNISPGSSCHC+EPGWFRVCFANMSE TL +A++R+K F++ST Sbjct: 4 LSTKVTSNGHGQDSSYFLGWEEYEKNPYDEIKNPNGMIQMGLAENQLCFDLIESWLTKNPDAASLKRNGQSIFRELALFQDYHGMPEFKKAMAEFMEEIRGNRVTFDPKKIVLAAGSTSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGAEIVPIHCSSSNGFQITESALQQAYQQAQKLDLKVKGVLVTNPSNPLGTALTRRELNLLVDFITSKNIHLISDEIYSGTMFGFEQFISVMDVLKDKKLEDTEVSKRVHVVYSLSKDLGLPGFRVGAIYSNDEMIVSAATKMSSFGLVSSQTQYLLSALLSDKKFTSQYLEENQKRLKSRQRRLVSGLESAGITCLRSNAGLFCWVDMRHLLDTNTFEAELDLWKKIVYNVKLNISPGSSCHCTEPGWFRVCFANMSEDTLDLALKRLKTFVEST 431
BLAST of LR48_mrnaVigan04g239200 vs. DB:Swiss
Match: 1A14_ARATH (1-aminocyclopropane-1-carboxylate synthase 4 OS=Arabidopsis thaliana OX=3702 GN=ACS4 PE=1 SV=1) HSP 1 Score: 614.764 bits (1584), Expect = 0.000e+0 Identity = 289/447 (64.65%), Postives = 351/447 (78.52%), Query Frame = 1 Query: 4 LSRKTTEDSHGQDSSYFLGWQEYDKNPYHHIRNPTGIIQMGLAENQLSFDLLESWLERNPEIVGMKQDGVSVFRELALFQDYHGLPALKKELVEFMSKIRGNRIKFAPEKLVLTAGATLANEIMMFCLAHPGEAFILPTPYYPGFDRDLKWRTGVEIVPLHCSSSNGFRITSSALKQAYQKAQKLNLKVKGVLVTNPSNPLGTTMTKAELNLLIDFAIE-KNIHIISDEIYSGTVFDPPEFVSIMEVVNERTSSINNIRNRTHIIYSLSKDLGVPGFRVGMIYSENETVVAAATKMSSFGLVSSQTQHLVANVLKDKKFAFNYIEENQRRVKRRMEMLVCGLRNAGIQCLKSNAGLFCWVDMRHLLSSASFEAEKELWMMILCHVGLNISPGSSCHCSEPGWFRVCFANMSEATLKVAMRRMKAFIDSTVSVVNDNGCTCEQSVRVN 1341 LSRK T +SHGQ SSYFLGW+EY+KNPY +NP GIIQMGLAENQL FDLLESWL +N + K+DG SVFRELALFQDYHGL + K +FMS+ RGNR+ F LVLTAGAT ANE +MFCLA PG+AF+LPTPYYPGFDRDLKWRTGVEIVP+ SS+NGFRIT AL++AY++A+KL+L VKG+L+TNPSNPLGTT T+ ELN+L DF + KNIH++SDEIYSGTVF+ EF+S+ME++ ++ NR HI+ SLSKDLG+PGFRVG IYS ++ V++AATKMSSFGLVSSQTQ+L++++L DKKF NY+ ENQ+R+K R LV GL GI+CLKSNAGLFCWVDMR LL S +FEAE +LW I+ V LNISPGSSCHC EPGWFRVCFANM + TLK+A++R+K +D S C +S R+N Sbjct: 4 LSRKATCNSHGQVSSYFLGWEEYEKNPYDVTKNPQGIIQMGLAENQLCFDLLESWLAQNTDAACFKRDGQSVFRELALFQDYHGLSSFKNAFADFMSENRGNRVSFDSNNLVLTAGATSANETLMFCLADPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIQSSSTNGFRITKLALEEAYEQAKKLDLNVKGILITNPSNPLGTTTTQTELNILFDFITKNKNIHLVSDEIYSGTVFNSSEFISVMEILKNNQLENTDVLNRVHIVCSLSKDLGLPGFRVGAIYSNDKDVISAATKMSSFGLVSSQTQYLLSSLLSDKKFTKNYLRENQKRLKNRQRKLVLGLEAIGIKCLKSNAGLFCWVDMRPLLRSKTFEAEMDLWKKIVYEVKLNISPGSSCHCEEPGWFRVCFANMIDETLKLALKRLKMLVDDENS---SRRCQKSKSERLN 447
BLAST of LR48_mrnaVigan04g239200 vs. DB:Swiss
Match: 1A11_ORYSJ (1-aminocyclopropane-1-carboxylate synthase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ACC1 PE=2 SV=1) HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0 Identity = 282/434 (64.98%), Postives = 343/434 (79.03%), Query Frame = 1 Query: 1 MLSRKTTEDSHGQDSSYFLGWQEYDKNPYHHIRNPTGIIQMGLAENQLSFDLLESWLERNPEIVGMKQDG--VSVFRELALFQDYHGLPALKKELVEFMSKIRGNRIKFAPEKLVLTAGATLANEIMMFCLAHPGEAFILPTPYYPGFDRDLKWRTGVEIVPLHCSSSNGFRITSSALKQAYQKAQKLNLKVKGVLVTNPSNPLGTTMTKAELNLLIDFAIEKNIHIISDEIYSGTVF-DPPE-FVSIMEVVNERTSSINNIRNRTHIIYSLSKDLGVPGFRVGMIYSENETVVAAATKMSSFGLVSSQTQHLVANVLKDKKFAFNYIEENQRRVKRRMEMLVCGLRNAGIQCLKSNAGLFCWVDMRHLLSSASFEAEKELWMMILCHVGLNISPGSSCHCSEPGWFRVCFANMSEATLKVAMRRMKAFIDSTV 1290 +LS+K +SHGQDSSYFLGWQEY+KNP+ + NP+GIIQMGLAENQLSFDLLE WLE+NP +G++++G SVFRELALFQDYHGLPA K L FMS+ RG ++ F P +VLTAGAT ANE +MFCLA G+AF++PTPYYPGFDRDLKWRTG EIVP+HC+S+NGFR+T AL AY++AQK L+VKGVL+TNPSNPLGT +A+L ++DF K IH+ISDEIY+GT F +PP FVS +EVV R ++ +R H++YSLSKDLG+PGFRVG IYS N VV+AATKMSSFGLVSSQTQ+L+A +L D+ F +Y+ EN+RR+K R + LV GLR GI CL SNAGLFCWVDM HL+ S SF E ELW ++ VGLNISPGSSCHC EPGWFRVCFANMS TL VAM+R+++F+DS Sbjct: 13 LLSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQLSFDLLEEWLEKNPHALGLRREGGGASVFRELALFQDYHGLPAFKNALARFMSEQRGYKVVFDPSNIVLTAGATSANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASANGFRVTRPALDDAYRRAQKRRLRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLISDEIYAGTAFAEPPAGFVSALEVVAGRDGGGADVSDRVHVVYSLSKDLGLPGFRVGAIYSANAAVVSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLREIGIGCLPSNAGLFCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFRVCFANMSAKTLDVAMQRLRSFVDSAT 446
BLAST of LR48_mrnaVigan04g239200 vs. DB:Swiss
Match: 1A11_ORYSI (1-aminocyclopropane-1-carboxylate synthase 1 OS=Oryza sativa subsp. indica OX=39946 GN=ACC1 PE=2 SV=2) HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0 Identity = 282/434 (64.98%), Postives = 343/434 (79.03%), Query Frame = 1 Query: 1 MLSRKTTEDSHGQDSSYFLGWQEYDKNPYHHIRNPTGIIQMGLAENQLSFDLLESWLERNPEIVGMKQDG--VSVFRELALFQDYHGLPALKKELVEFMSKIRGNRIKFAPEKLVLTAGATLANEIMMFCLAHPGEAFILPTPYYPGFDRDLKWRTGVEIVPLHCSSSNGFRITSSALKQAYQKAQKLNLKVKGVLVTNPSNPLGTTMTKAELNLLIDFAIEKNIHIISDEIYSGTVF-DPPE-FVSIMEVVNERTSSINNIRNRTHIIYSLSKDLGVPGFRVGMIYSENETVVAAATKMSSFGLVSSQTQHLVANVLKDKKFAFNYIEENQRRVKRRMEMLVCGLRNAGIQCLKSNAGLFCWVDMRHLLSSASFEAEKELWMMILCHVGLNISPGSSCHCSEPGWFRVCFANMSEATLKVAMRRMKAFIDSTV 1290 +LS+K +SHGQDSSYFLGWQEY+KNP+ + NP+GIIQMGLAENQLSFDLLE WLE+NP +G++++G SVFRELALFQDYHGLPA K L FMS+ RG ++ F P +VLTAGAT ANE +MFCLA G+AF++PTPYYPGFDRDLKWRTG EIVP+HC+S+NGFR+T AL AY++AQK L+VKGVL+TNPSNPLGT +A+L ++DF K IH+ISDEIY+GT F +PP FVS +EVV R ++ +R H++YSLSKDLG+PGFRVG IYS N VV+AATKMSSFGLVSSQTQ+L+A +L D+ F +Y+ EN+RR+K R + LV GLR GI CL SNAGLFCWVDM HL+ S SF E ELW ++ VGLNISPGSSCHC EPGWFRVCFANMS TL VAM+R+++F+DS Sbjct: 13 LLSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQLSFDLLEEWLEKNPHALGLRREGGGASVFRELALFQDYHGLPAFKNALARFMSEQRGYKVVFDPSNIVLTAGATSANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASANGFRVTRPALDDAYRRAQKRRLRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLISDEIYAGTAFAEPPAGFVSALEVVAGRDGGGADVSDRVHVVYSLSKDLGLPGFRVGAIYSANAAVVSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLREIGIGCLPSNAGLFCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFRVCFANMSAKTLDVAMQRLRSFVDSAT 446 The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan04g239200 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
Sequences
The
following sequences are available for this feature:
mRNA sequence >LR48_mrnaVigan04g239200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g239200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g239200; organism=Vigna angularis; type=mRNA; length=4847bpback to top protein sequence of LR48_mrnaVigan04g239200_Va_Jingnong6_v1.1 >LR48_mrnaVigan04g239200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g239200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g239200_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=448bpback to top mRNA from alignment at Chr_4-CM003374.1:33134459..33139305- Legend: polypeptidestart_codonexonCDSintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.>LR48_mrnaVigan04g239200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g239200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g239200; organism=Vigna angularis; type=mRNA; length=4847bp; location=Sequence derived from: Chr_4-CM003374.1:33134459..33139305- (Vigna angularisback to top Coding sequence (CDS) from alignment at Chr_4-CM003374.1:33134459..33139305- >LR48_mrnaVigan04g239200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan04g239200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan04g239200; organism=Vigna angularis; type=CDS; length=1347bp; location=Sequence derived from: Chr_4-CM003374.1:33134459..33139305- (Vigna angularisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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