LR48_mrnaVigan05g218900

Transcript Overview
NameLR48_mrnaVigan05g218900
Unique NameLR48_mrnaVigan05g218900_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length2211
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_5-CM003375.1supercontigChr_5-CM003375.1:29796234..29798444 +Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR619Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR644Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR651Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL054Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0121Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0387Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0863Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0865Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1015Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1099Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1340Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR750Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR755Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0943Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0965Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR701Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR710Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR738Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR749Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR602Pisum sativum Cameor genome v1aPisum sativum
aspsR609Pisum sativum Cameor genome v1aPisum sativum
aspsR636Pisum sativum Cameor genome v1aPisum sativum
aspsR638Pisum sativum Cameor genome v1aPisum sativum
aspsR639Pisum sativum Cameor genome v1aPisum sativum
aspvR665Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR666Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR686Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR692Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR731Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR580Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR591Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR595Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR651Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR677Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR679Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR666Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR691Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR694Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR535Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR560Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR566Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR578Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR719Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR724Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR733Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR738Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR746Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR756Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR542Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR559Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR564Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR566Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR594Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vigun05g293000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_015046Cajanus cajan Asha genome v1.0Cajanus cajan
Psat7g256120.1Pisum sativum Cameor genome v1aPisum sativum
Ca_02874Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_014660219.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.5g001280.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_13439Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.5g001560.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_30131Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014644291.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.010G154500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_000198Cajanus cajan Asha genome v1.0Cajanus cajan
jg9724.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_004486625.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Hedin2.R1.2g264880.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_004506853.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg57379.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun10g189300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.005G176200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cr_00898.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat5g301560.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_16300Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_00170.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vfaba.Tiffany.R1.2g206880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
evm.model.Chr10.1774Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
evm.model.Chr05.2732Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan05g218900gene-LR48_Vigan05g218900_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan05g218900LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-start_codon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29796234..29796236LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-start_codon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29796234..29796236Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-exon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29796234..29796350LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-exon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29796234..29796350Vigna angularisexon
LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-exon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29796443..29796491LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-exon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29796443..29796491Vigna angularisexon
LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-exon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29797930..29797992LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-exon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29797930..29797992Vigna angularisexon
LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-exon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29798116..29798180LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-exon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29798116..29798180Vigna angularisexon
LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-exon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29798343..29798444LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-exon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29798343..29798444Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-intron-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29796351..29796442LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-intron-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29796351..29796442Vigna angularisintron
LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-intron-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29796492..29797929LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-intron-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29796492..29797929Vigna angularisintron
LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-intron-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29797993..29798115LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-intron-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29797993..29798115Vigna angularisintron
LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-intron-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29798181..29798342LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-intron-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29798181..29798342Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS4871CDS4871_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-stop_codon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29798442..29798444LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1-stop_codon-Chr_5-CM003375.1_Va_Jingnong6_v1.1-1589992784:29798442..29798444Vigna angularisstop_codon


Homology
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BLAST of LR48_mrnaVigan05g218900 vs. DB:Swiss
Match: Y2416_ARATH (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.244e-64
Identity = 97/114 (85.09%), Postives = 104/114 (91.23%), Query Frame = 1 
Query:    1 MEGITEGVNNINI-TDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKITTSTVDIKDDSRGRPVQKAKIEIVLGKTANFDELM 339
            ME IT+GVNN+N+ TDS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+N+VELSALGMAIATVVTV EILKNNG AVEKKI TSTVDIKDD+RGRPVQKAKIEI L K+  FDELM
Sbjct:    1 MEEITDGVNNMNLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELM 114
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan05g218900 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 1
Match NameE-valueIdentityDescription
Y2416_ARATH5.244e-6485.09Uncharacterized protein At2g34160 OS=Arabidopsis t... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014560Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-relatedPIRSFPIRSF030333UCP030333_Albacoord: 1..131
e-value: 8.4E-62
score: 205.2
IPR036882Alba-like domain superfamilyGENE3D3.30.110.20coord: 18..130
e-value: 6.4E-51
score: 173.0
IPR036882Alba-like domain superfamilySUPERFAMILY82704AlbA-likecoord: 19..114
IPR002775DNA/RNA-binding protein Alba-likePFAMPF01918Albacoord: 20..82
e-value: 1.5E-13
score: 50.2

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan05g218900; organism=Vigna angularis; type=mRNA; length=2211bp
ATGGAAGGCATAACAGAGGGAGTGAACAACATCAACATTACCGATTCCTA
CAAGAAGAATCGTATTCAGGTCTCTAACACCAAGAAGCCCCTATTCTTCT
ATGTTAATCTCGCCAAGGTAGTATCACGCCATGTCTCTGTATTTTCGATT
TTGAAGcgagtgttttattttttatttatctcttcattttgatttttgtg
aATGTGCAGAGATACATGCAACAGCATAACGAGGTCGAACTTTCAGCTCT
AGGAATGGGTATTGAAACCCCTCTCCTTGTTTCTGTTTTTGAGTTTTATT
AGTTGAATTTTGCTGGTGTTGGTTCTATTGGTTACTTGTTGATTATCAAT
GTGGAATCAATGATCTGTGTTCACTCAGGTGTTATTATTAAAACTTTGCT
AAATATAGCTCTGTTCTATTGggaattttaataaacttaagAATGATTGC
ACTTCAAATTTTGTTGAACAGAAAATTACTCTTGTGaacatatataattt
gattaggTTTCATTGGCTACCCCTGCATGCCCTGAACTTTTGAACGCCTT
CAGTCTTGGACTTTGATTCAAGCCTTTCATATTTTCCTCTGAATTAAACT
TTCTCTACTGTGATTCTGGTGTTAAACCTATATATGTACTTATGCTCAGT
TTAAAGCATCACATCACTGGCCTCCTATGCTCTGATTCTTCATGAAATTC
CACATAATAAGTCGGAGGTTTGTAGCCCATATTTTTGCTTTGCTGATCCC
ATTGTATCCATTGGGTAAATGTGACTCTGTCAAATCAGATAAACTAATTT
TTGATGTAGATGTATTTGTGAGGTCCTGTAATTAGAGTTTCCCCCTTGAC
TCTTCGTGAAGATCTGCACACGGGCATTTCTTCTAGTGTGGGTTTGAAGT
GTAATCCATTACATATATATGAGAAAATGGCGTGTACGTGTAAGTTGAAA
ATTCTATGATGATATTATTACCATTATAAATCAAACTTATTAATATTAGA
AATATAAGTACTAAAAACTCATAAGttaatgatatataataatttagagT
TTACACATGCAATCAATGTCAATCTAGAAGGAATAAGAGTGGAGTAATGA
AGTCGAAAAATGAAAGTTGGTAATGAAATTAACAGGAAAAAGTTTAGCTA
ATTAGATAAAACAATAGACTGGTAAAGTGTGAAGGAACAGAAAAAAATGT
AGTCTTGTAATGTGTAATGTTCAAGGCAGAAGGGTTTTGAAGGGTTTCGA
AAGCTAGTATATTCTCATAGCAAAAAATTCATAGAAAATTAGAGAGAAAT
CACAAATTTACCCAAAGAATATACCTAAACGATCAACTTGGTTTTTGAAG
CATATATCTTAGTAACATTGATATATCACACAAATTGCTGCTATGCTCTC
CTATAATGTGCCATTGTCTTTCATCATCTGTTATTTCATTTGTGTAGAAG
ATATAAATACTGGGAGAAAACTGTTGCAACAGTCTGATAAGTATATTTGC
AAtaacttctaaaattttataattgagaCAGCAGTATTTTATGTGGCTGT
CATGTTGTTTCCTTATTTTGTAGAACTTTATTACAATGCACTGATTTTTT
ACGCGACTTTTGTACCTCTCTTTTTCCTATTCTCTTTCCTTGATTCCGAT
CTTAATATGATTTCCGAATTTTCAACCCCATTTTTGTTTATTGCAGCTAT
TGCCACAGTGGTAACTGTTgctgaaattttgaaaaacaacgGACTTGCTG
TGGAGAAGAGTgagattcaatttttttcccaTTTATTTTCTGTGAAATCC
CTTTTTGCTCTCGTACATCTATCCTATTCTTCAGTGGATAAATAATGTAA
TCTAATTTGTTAATGACGCAATCTTCATGCAGAAATCACGACATCAACTG
TTGACATAAAGGACGATTCCAGAGGTAGACCTGTTCAAAAGGCCAAGGTA
AGTCTGTAAACACATGTTTACTCTAGAATTTTATGTTGATGTGTATGATC
ATGTGCATGTGATTTCATATCATCGTCTAACAGTTTACTTGCTACCCATA
GCTTTGGAATCTGCTTTACAACTAGCCTAAGTTTTTGCATTTGATGACTC
GTGTTTTAGATTGAAATAGTACTTGGGAAAACAGCAAACTTCGATGAATT
GATGGCGGCTGCTGCTGCTGAAGACGGTGAAAATGGCGATGCTGAAGAGC
AAAACGCATAA
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protein sequence of LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1

>LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=131bp
MEGITEGVNNINITDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVEL
SALGMAIATVVTVAEILKNNGLAVEKKITTSTVDIKDDSRGRPVQKAKIE
IVLGKTANFDELMAAAAAEDGENGDAEEQNA
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mRNA from alignment at Chr_5-CM003375.1:29796234..29798444+

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan05g218900; organism=Vigna angularis; type=mRNA; length=2211bp; location=Sequence derived from: Chr_5-CM003375.1:29796234..29798444+ (Vigna angularis
ATGGAAGGCATAACAGAGGGAGTGAACAACATCAACATTACCGATTCCTA
CAAGAAGAATCGTATTCAGGTCTCTAACACCAAGAAGCCCCTATTCTTCT
ATGTTAATCTCGCCAAGGTAGTATCACGCCATGTCTCTGTATTTTCGATT
TTGAAGcgagtgttttattttttatttatctcttcattttgatttttgtg
aATGTGCAGAGATACATGCAACAGCATAACGAGGTCGAACTTTCAGCTCT
AGGAATGGGTATTGAAACCCCTCTCCTTGTTTCTGTTTTTGAGTTTTATT
AGTTGAATTTTGCTGGTGTTGGTTCTATTGGTTACTTGTTGATTATCAAT
GTGGAATCAATGATCTGTGTTCACTCAGGTGTTATTATTAAAACTTTGCT
AAATATAGCTCTGTTCTATTGggaattttaataaacttaagAATGATTGC
ACTTCAAATTTTGTTGAACAGAAAATTACTCTTGTGaacatatataattt
gattaggTTTCATTGGCTACCCCTGCATGCCCTGAACTTTTGAACGCCTT
CAGTCTTGGACTTTGATTCAAGCCTTTCATATTTTCCTCTGAATTAAACT
TTCTCTACTGTGATTCTGGTGTTAAACCTATATATGTACTTATGCTCAGT
TTAAAGCATCACATCACTGGCCTCCTATGCTCTGATTCTTCATGAAATTC
CACATAATAAGTCGGAGGTTTGTAGCCCATATTTTTGCTTTGCTGATCCC
ATTGTATCCATTGGGTAAATGTGACTCTGTCAAATCAGATAAACTAATTT
TTGATGTAGATGTATTTGTGAGGTCCTGTAATTAGAGTTTCCCCCTTGAC
TCTTCGTGAAGATCTGCACACGGGCATTTCTTCTAGTGTGGGTTTGAAGT
GTAATCCATTACATATATATGAGAAAATGGCGTGTACGTGTAAGTTGAAA
ATTCTATGATGATATTATTACCATTATAAATCAAACTTATTAATATTAGA
AATATAAGTACTAAAAACTCATAAGttaatgatatataataatttagagT
TTACACATGCAATCAATGTCAATCTAGAAGGAATAAGAGTGGAGTAATGA
AGTCGAAAAATGAAAGTTGGTAATGAAATTAACAGGAAAAAGTTTAGCTA
ATTAGATAAAACAATAGACTGGTAAAGTGTGAAGGAACAGAAAAAAATGT
AGTCTTGTAATGTGTAATGTTCAAGGCAGAAGGGTTTTGAAGGGTTTCGA
AAGCTAGTATATTCTCATAGCAAAAAATTCATAGAAAATTAGAGAGAAAT
CACAAATTTACCCAAAGAATATACCTAAACGATCAACTTGGTTTTTGAAG
CATATATCTTAGTAACATTGATATATCACACAAATTGCTGCTATGCTCTC
CTATAATGTGCCATTGTCTTTCATCATCTGTTATTTCATTTGTGTAGAAG
ATATAAATACTGGGAGAAAACTGTTGCAACAGTCTGATAAGTATATTTGC
AAtaacttctaaaattttataattgagaCAGCAGTATTTTATGTGGCTGT
CATGTTGTTTCCTTATTTTGTAGAACTTTATTACAATGCACTGATTTTTT
ACGCGACTTTTGTACCTCTCTTTTTCCTATTCTCTTTCCTTGATTCCGAT
CTTAATATGATTTCCGAATTTTCAACCCCATTTTTGTTTATTGCAGCTAT
TGCCACAGTGGTAACTGTTgctgaaattttgaaaaacaacgGACTTGCTG
TGGAGAAGAGTgagattcaatttttttcccaTTTATTTTCTGTGAAATCC
CTTTTTGCTCTCGTACATCTATCCTATTCTTCAGTGGATAAATAATGTAA
TCTAATTTGTTAATGACGCAATCTTCATGCAGAAATCACGACATCAACTG
TTGACATAAAGGACGATTCCAGAGGTAGACCTGTTCAAAAGGCCAAGGTA
AGTCTGTAAACACATGTTTACTCTAGAATTTTATGTTGATGTGTATGATC
ATGTGCATGTGATTTCATATCATCGTCTAACAGTTTACTTGCTACCCATA
GCTTTGGAATCTGCTTTACAACTAGCCTAAGTTTTTGCATTTGATGACTC
GTGTTTTAGATTGAAATAGTACTTGGGAAAACAGCAAACTTCGATGAATT
GATGGCGGCTGCTGCTGCTGAAGACGGTGAAAATGGCGATGCTGAAGAGC
AAAACGCATAA
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Coding sequence (CDS) from alignment at Chr_5-CM003375.1:29796234..29798444+

>LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan05g218900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan05g218900; organism=Vigna angularis; type=CDS; length=396bp; location=Sequence derived from: Chr_5-CM003375.1:29796234..29798444+ (Vigna angularis
ATGGAAGGCATAACAGAGGGAGTGAACAACATCAACATTACCGATTCCTA
CAAGAAGAATCGTATTCAGGTCTCTAACACCAAGAAGCCCCTATTCTTCT
ATGTTAATCTCGCCAAGAGATACATGCAACAGCATAACGAGGTCGAACTT
TCAGCTCTAGGAATGGCTATTGCCACAGTGGTAACTGTTgctgaaatttt
gaaaaacaacgGACTTGCTGTGGAGAAGAAAATCACGACATCAACTGTTG
ACATAAAGGACGATTCCAGAGGTAGACCTGTTCAAAAGGCCAAGATTGAA
ATAGTACTTGGGAAAACAGCAAACTTCGATGAATTGATGGCGGCTGCTGC
TGCTGAAGACGGTGAAAATGGCGATGCTGAAGAGCAAAACGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR014560UCP030333_Alba
IPR036882Alba-like_dom_sf
IPR002775DNA/RNA-bd_Alba-like
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding