LR48_mrnaVigan08g185200
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Homology
BLAST of LR48_mrnaVigan08g185200 vs. DB:Swiss
Match: Y1063_ARATH (Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 OS=Arabidopsis thaliana OX=3702 GN=At1g60630 PE=2 SV=1) HSP 1 Score: 496.123 bits (1276), Expect = 2.168e-165 Identity = 246/340 (72.35%), Postives = 283/340 (83.24%), Query Frame = 1 Query: 1336 FAWEGEG----LGKLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHV-SSNSSDHSPGRWSDTVQSFPREEHQSI 2340 F+WE E +G LVF G + Y+++DLLKASAETLGRG +GSTYKAVMESGFI+TVKRLKDA +P ++EF+ HI +LGRL HPNLVPLRAYFQAKEE LLVYDYFPNGSLFSLIHGSK SG GKPLHWTSCLKIAEDLA GL+YIHQNPG+THGNLKSSNVLLG DFESCLTDYGL+ +P S+++ SA SLFY+APECR+ +++ TQPADVYSFGVL+LELLTG+T F+DLV YGSDI WVR+VREEETE + ASEEKLQALL IA ACV++ PENRP MREVLKM++DAR EA + S NSSDHSPGRWSDT+QS PRE+H SI Sbjct: 317 FSWEKESEEGSVGTLVFLGRDITVVRYTMDDLLKASAETLGRGTLGSTYKAVMESGFIITVKRLKDAGFPRMDEFKRHIEILGRLKHPNLVPLRAYFQAKEECLLVYDYFPNGSLFSLIHGSKVSGSGKPLHWTSCLKIAEDLAMGLVYIHQNPGLTHGNLKSSNVLLGPDFESCLTDYGLSDLHDPYSIEDTSAASLFYKAPECRDLRKASTQPADVYSFGVLLLELLTGRTSFKDLVHKYGSDISTWVRAVREEETEV----SEELNASEEKLQALLTIATACVAVKPENRPAMREVLKMVKDARAEAALFSFNSSDHSPGRWSDTIQSLPREDHMSI 652 HSP 2 Score: 252.292 bits (643), Expect = 2.256e-72 Identity = 135/225 (60.00%), Postives = 168/225 (74.67%), Query Frame = 1 Query: 397 PTRAEDDSQPLLALKSSIDVLHKLPWRQGADVCTWKGVKDCFNGRVRKLVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVPDLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASXXXXXXXXXXXXEDNAFTGSIPPFNQTSLRYLNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENILQPCKNGS-VPSAPPISPSYPL 1068 P R+ D + LL+LKSSID + +PWR G D C W+GVK C GRV KLVLE+ NL+GSL+ K LN+LDQLRVLSFKGNSLSG +P+LS L+NLKS++LNDNNFSGEFP S+ LHR+K +VLS+N SG IP+SLL L RLY Y++DN F+GSIPP NQ +LR+ NVSNN+LSG IP T AL RFN SSF+ N LCG+ I C + + + S P P+ P+ Sbjct: 20 PVRSSD-VEALLSLKSSIDPSNSIPWR-GTDPCNWEGVKKCMKGRVSKLVLENLNLSGSLNGKSLNQLDQLRVLSFKGNSLSGSIPNLSGLVNLKSLYLNDNNFSGEFPESLTSLHRLKTVVLSRNRFSGKIPSSLLRLSRLYTFYVQDNLFSGSIPPLNQATLRFFNVSNNQLSGHIPPTQALNRFNESSFTDNIALCGDQIQNSCNDTTGITSTPSAKPAIPV 242
BLAST of LR48_mrnaVigan08g185200 vs. DB:Swiss
Match: PXC1_ARATH (Leucine-rich repeat receptor-like protein kinase PXC1 OS=Arabidopsis thaliana OX=3702 GN=PXC1 PE=1 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 2.015e-92 Identity = 246/667 (36.88%), Postives = 345/667 (51.72%), Query Frame = 1 Query: 400 TRAEDDSQPLLALKSSIDVLHKLP--WRQGADVCT--WKGVKDCF--NGRVRKLVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVPDLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASXXXXXXXXXXXXEDNAFTGSIPPFNQT-SLRYLNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENILQPCKNGSVPSAP---PISPSYPL-IPGGTAAASK-RTSSNRTXXXXXXXXXXXXXXXXXXXMVVVWAICRKRKTRVGSGTRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAWEGEGLGKLVFCGGGD----------------REMSYSLEDLLKASAETLGRGIIGSTYKAVMESG-FIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGK-PLHWTSCLKIAEDLATGLLYIHQNPGMT---HGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTP---------------FQDLVQTYGSDIPRWVRSVREEE--TESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGE 2250 T A++D+ L + D L W G+D CT W+GV C + RV +L L +L G L L+ LDQLR+L N L+G V L+ NL+ ++L N+ SGE P ++ L R+ + LS N+I G IP +L R+ + +++N TG IP F+Q SL LNVS N L G + + +F SFSGN GLCG + L C + P + I PS P IP + + S+R II +GG V +++ + +A C R R G ++S F GEG + + GG+ R + L+DLLKASAE LG+G +G+ YKAV++ G V VKRLKDA +EF ++ ++GRL H N+V LRAY+ AKEE+LLVY+Y PNGSL SL+HG++ G G+ PL WT+ + + A GL IH ++ HGN+KSSNVLL + + + D+GL++ LNP A YRAPE +R +Q ADVYSFGVL+LE+LTGK P + + D+P+WVRSV +EE E D + EE++ A+L+I +ACV PE RPTM EV+KM+ + R E Sbjct: 19 TLAQNDTNALTLFRLQTDTHGNLAGNW-TGSDACTSSWQGVS-CSPSSHRVTELSLPSLSLRGPLTS--LSSLDQLRLLDLHDNRLNGTVSPLTNCKNLRLVYLAGNDLSGEIPKEISFLKRMIRLDLSDNNIRGVIPREILGFTRVLTIRIQNNELTGRIPDFSQMKSLLELNVSFNELHGNVS-DGVVKKFGDLSFSGNEGLCGSDPLPVCTITNDPESSNTDQIVPSNPTSIPHSPVSVREPEIHSHRGIKPGIIAAVIGGCVAVIVLVSFGFAFCCGRLDRNGERSKSGSVETG--------------------------FVGGGEGKRRSSYGEGGESDATSATDRSRLVFFERRKQFELDDLLKASAEMLGKGSLGTVYKAVLDDGSTTVAVKRLKDANPCPRKEFEQYMEIIGRLKHQNVVKLRAYYYAKEEKLLVYEYLPNGSLHSLLHGNR--GPGRIPLDWTTRISLMLGAARGLAKIHDEYSISKIPHGNIKSSNVLLDRNGVALIADFGLSLLLNP---VHAIARLGGYRAPEQSEIKR-LSQKADVYSFGVLLLEVLTGKAPSIFPSPSRPRSAASVAVEEEEEAVVDLPKWVRSVVKEEWTAEVFDPELLRYKNIEEEMVAMLHIGLACVVPQPEKRPTMAEVVKMVEEIRVE 648
BLAST of LR48_mrnaVigan08g185200 vs. DB:Swiss
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 8.437e-90 Identity = 224/623 (35.96%), Postives = 337/623 (54.09%), Query Frame = 1 Query: 415 DSQPLLALKSSIDVLHKLPWR-QGADVCTWKGVKDCFNGRVRKLVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVP-DLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASXXXXXXXXXXXXEDNAFTGSIPPFNQTSLRYLNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENILQPCKNGSVPSAPPISPSYPLIPGGTAAASKRTSSNRTXXXXXXXXXXXXXXXXXXXMVVVWAICRKRKTRVG-----SGTRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAWEGEG--LGKLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIH-QNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWVRSVREEE--TESGDDPASGNEASEEKLQA-LLNIAMACVSLVPENRPTMREVLKMIRDAR 2244 D LL+L+S++ W + C W GVK C + RV L L L+G + + I L QLR LS + N+LSG +P DLS NL+ ++L N FSGE P + L + + L+ N +G+I + NL +L L+LE+N +GSIP + +++ NVSNN L+G IP L RF + SF LCG+ + +VPS P + P + ++ N+ I G +G VV L ++++ +CRK+ + S + + + EA G+ + G A EG G KLVF G + + LEDLL+ASAE LG+G G+ YKAV+++ +V VKRLKD +EF+ I ++G + H NLVPLRAY+ +++E+LLVYD+ P GSL +L+HG++ G PL+W +IA A GL Y+H Q +HGN+KSSN+LL ++ ++D+GL + + + AT YRAPE + +R +Q DVYSFGV++LEL+TGK P ++ G D+PRWV+SV +E E D EE++ A ++ + + C S P+ RP M EV++ + + R Sbjct: 36 DRTALLSLRSAVGG-RTFRWNIKQTSPCNWAGVK-CESNRVTALRLPGVALSGDIPEGIFGNLTQLRTLSLRLNALSGSLPKDLSTSSNLRHLYLQGNRFSGEIPEVLFSLSHLVRLNLASNSFTGEISSGFTNLTKLKTLFLENNQLSGSIPDLDLPLVQF-NVSNNSLNGSIP--KNLQRFESDSFL-QTSLCGKPLKLCPDEETVPSQPTSGGNR--TPPSVEGSEEKKKKNKLSGGAIAGIVIGCVVGFALIVLILMVLCRKKSNKRSRAVDISTIKQQEPEIPGDKEAVDNGNVYSVSAAAAAAMTGNGKASEGNGPATKKLVFFGNATK--VFDLEDLLRASAEVLGKGTFGTAYKAVLDAVTVVAVKRLKDVMMAD-KEFKEKIELVGAMDHENLVPLRAYYFSRDEKLLVYDFMPMGSLSALLHGNR-GAGRSPLNWDVRSRIAIGAARGLDYLHSQGTSTSHGNIKSSNILLTKSHDAKVSDFGLAQLVGSSATNPNRATG--YRAPEVTDPKRV-SQKGDVYSFGVVLLELITGKAPSNSVMNEEGVDLPRWVKSVARDEWRREVFDSELLSLATDEEEMMAEMVQLGLECTSQHPDQRPEMSEVVRKMENLR 643
BLAST of LR48_mrnaVigan08g185200 vs. DB:Swiss
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana OX=3702 GN=RLK902 PE=1 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 1.142e-88 Identity = 226/621 (36.39%), Postives = 337/621 (54.27%), Query Frame = 1 Query: 415 DSQPLLALKSSIDVLHKLPWRQGADVCTWKGVKDCFNGRVRKLVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVP-DLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASXXXXXXXXXXXXEDNAFTGSIPPFNQTSLRYLNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENILQPCKNGSVPSAPPISPSYPLIPGGTAAASKRTSSNRTXXXXXXXXXXXXXXXXXXXMVVVWAICRKR---KTR-VGSGTRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAWEGEGLGKLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIH-QNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWVRSVREEE--TESGDDPASGNE---ASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDAR 2244 D LL+ +S++ L + C W GV C GRV L L L+G + + I L QLR LS + N L+G +P DL + +L+ ++L N FSGE P + L + + L++N SG+I + NL RL LYLE+N +GS+ + + ++ NVSNN L+G IP +L +F++ SF G LCG+ ++ G+VPS P S IPG + ++ + I G +G VV + L ++++ + RK+ +TR + T ++ +A + G+ KLVF G + + LEDLL+ASAE LG+G G+ YKAV+++ +V VKRLKD EF+ I V+G + H NLVPLRAY+ + +E+LLVYD+ P GSL +L+HG+K G PL+W IA A GL Y+H Q+P +HGN+KSSN+LL + ++ ++D+GL ++ S AT YRAPE + +R +Q ADVYSFGV++LELLTGK P ++ G D+ RWV SV EE E D E + EE++ +L + + C P+ RP M EV++ I++ R Sbjct: 34 DKSALLSFRSAVGGRTLLWDVKQTSPCNWTGVL-CDGGRVTALRLPGETLSGHIPEGIFGNLTQLRTLSLRLNGLTGSLPLDLGSCSDLRRLYLQGNRFSGEIPEVLFSLSNLVRLNLAENEFSGEISSGFKNLTRLKTLYLENNKLSGSLLDLDLSLDQF-NVSNNLLNGSIP--KSLQKFDSDSFVGT-SLCGKPLVVCSNEGTVPSQPI---SVGNIPGTVEGSEEKKKRKKLSGGAIAGIVIGCVVGLSLIVMILMVLFRKKGNERTRAIDLATIKHHEVEIPGEKAAVEAPENRSYVNEYSPSAVKAVEVNSSGMKKLVFFGNATK--VFDLEDLLRASAEVLGKGTFGTAYKAVLDAVTLVAVKRLKDVTMAD-REFKEKIEVVGAMDHENLVPLRAYYYSGDEKLLVYDFMPMGSLSALLHGNK-GAGRPPLNWEVRSGIALGAARGLDYLHSQDPLSSHGNVKSSNILLTNSHDARVSDFGLAQLVSASSTTPNRATG--YRAPEVTDPRRV-SQKADVYSFGVVLLELLTGKAPSNSVMNEEGMDLARWVHSVAREEWRNEVFDSELMSIETVVSVEEEMAEMLQLGIDCTEQHPDKRPVMVEVVRRIQELR 639
BLAST of LR48_mrnaVigan08g185200 vs. DB:Swiss
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana OX=3702 GN=At5g16590 PE=1 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 1.652e-88 Identity = 240/639 (37.56%), Postives = 346/639 (54.15%), Query Frame = 1 Query: 409 EDDSQPLLALKSSIDVLHKLP--WRQGADVCTWKGVKDCFNGRVRKLVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVP-DLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASXXXXXXXXXXXXEDNAFTGSIPPFNQTSLRYLNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENILQPCKNGSVPSAPPISPSYPLIPGGTAAASKRTSSNRTXXXXXXXXXXXXXXXXXXXMVVVWAICRKRKTRVGSGTRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAWEGEGLGK-LVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGMT-HGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGD-DP--ASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSD 2301 E D + L+AL+ D +H P W A CTW GV+ C +GRV L L L+G L I N L +L LSF+ N+L+G +P D + L L+ ++L N FSGE PS + L + I L+QN+ G IP ++ + RL LYL+DN TG IP + L+ NVS+N+L+G IP L ++F GN LCG+ + NG+ GT + S++ I+G +G V +L+ ++V+ +CRK+K +RS V A A + G + A + G + + K L F E + L+ LLKASAE LG+G GS+YKA + G +V VKRL+D P +EFR + VLG ++H NLV L AY+ +++E+L+V++Y GSL +L+HG+K SG PL+W + IA A + Y+H T HGN+KSSN+LL FE+ ++DY L ++P S P+ YRAPE + R +Q ADVYSFGVL+LELLTGK+P + G D+PRWV S+ E+++ S DP S E + LLNI ++C + P++RPTM EV ++I + + S SPG SD Sbjct: 26 EADRRALIALR---DGVHGRPLLWNLTAPPCTWGGVQ-CESGRVTALRLPGVGLSGPLPIAIGN-LTKLETLSFRFNALNGPLPPDFANLTLLRYLYLQGNAFSGEIPSFLFTLPNIIRINLAQNNFLGRIPDNVNSATRLATLYLQDNQLTGPIPEI-KIKLQQFNVSSNQLNGSIP--DPLSGMPKTAFLGNL-LCGKPLDACPVNGT--------------GNGTVTPGGKGKSDKLSAGAIVGIVIGCFVLLLVLFLIVFCLCRKKKKEQVVQSRSIEAAPVPTSSAAVAKESNGPPAVVANGASENGVSKNPAAVSKDLTFFVKSFGE--FDLDGLLKASAEVLGKGTFGSSYKASFDHGLVVAVKRLRDVVVPE-KEFREKLQVLGSISHANLVTLIAYYFSRDEKLVVFEYMSRGSLSALLHGNKGSGR-SPLNWETRANIALGAARAISYLHSRDATTSHGNIKSSNILLSESFEAKVSDYCLAPMISPTST--PNRID-GYRAPEVTD-ARKISQKADVYSFGVLILELLTGKSPTHQQLHEEGVDLPRWVSSITEQQSPSDVFDPELTRYQSDSNENMIRLLNIGISCTTQYPDSRPTMPEVTRLIEEV--------SRSPASPGPLSD 625
BLAST of LR48_mrnaVigan08g185200 vs. DB:Swiss
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana OX=3702 GN=At5g67200 PE=1 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.365e-85 Identity = 155/312 (49.68%), Postives = 201/312 (64.42%), Query Frame = 1 Query: 1360 GKLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDAR--YPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQ-NPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSM--DEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKT----PFQDLVQTYGSDIPRWVRSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHVSSN 2268 G LVFCG + Y++E L++ASAE LGRG +G TYKAV+++ IVTVKRL A+ E F H+ ++G L H NLVP+R+YFQ+ ERL++YDY PNGSLF+LIHGS++S KPLHWTSCLKIAED+A GL YIHQ + + HGNLKS+N+LLG DFE+CLTDY L+V + S D+P ++S Y+APE R R T DVYSFGVL+ ELLTGK PF D+ WVR++REEE + D+ +L + A C PE RPTMR+V+KMI++ + N Sbjct: 372 GNLVFCGESRSQGMYTMEQLMRASAELLGRGSVGITYKAVLDNQLIVTVKRLDAAKTAVTSEEAFENHMEIVGGLRHTNLVPIRSYFQSNGERLIIYDYHPNGSLFNLIHGSRSSRA-KPLHWTSCLKIAEDVAQGLYYIHQTSSALVHGNLKSTNILLGQDFEACLTDYCLSVLTDSSSASPDDPDSSS--YKAPEIRKSSRRPTSKCDVYSFGVLIFELLTGKNASRHPFM-----APHDMLDWVRAMREEEEGTEDN----------RLGMMTETACLCRVTSPEQRPTMRQVIKMIQEIKESVMAEEN 665 HSP 2 Score: 179.104 bits (453), Expect = 3.553e-46 Identity = 102/207 (49.28%), Postives = 134/207 (64.73%), Query Frame = 1 Query: 415 DSQPLLALKSSIDVLHKLPWR--QGADVCTWKGVKDCFNGRVRKLVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVPDLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASXXXXXXXXXXXXEDNAFTGSIPPFNQTSLRYLNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENILQPCKNGS 1029 D+ LL+ KS+ D+ +KL + + D C W+GVK C GR+ +LVL L G L+RLDQLRVLS + NSL G +PDLS L+NLKS+FL+ N FSG FP S+ LHR+ ++ +S N+ SG IP+ + L RL L L+ N F G++P NQ+ L NVS N L+G IPVT L RF+ASSF NPGLCGE I + C + S Sbjct: 34 DAVALLSFKSTADLDNKLLYSLTERYDYCQWRGVK-CAQGRIVRLVLSGVGLRGYFSSATLSRLDQLRVLSLENNSLFGPIPDLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPSLNQSFLTSFNVSGNNLTGVIPVTPTLSRFDASSFRSNPGLCGEIINRACASRS 239
BLAST of LR48_mrnaVigan08g185200 vs. DB:Swiss
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana OX=3702 GN=At4g23740 PE=1 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 1.796e-78 Identity = 209/625 (33.44%), Postives = 324/625 (51.84%), Query Frame = 1 Query: 412 DDSQPLLALKSSIDVLHKLPWRQGADVCT-WKGVKDCFNG-RVRKLVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVP-DLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASXXXXXXXXXXXXEDNAFTGSIPPFNQ-TSLRYLNVSNNR-LSGEIPVTAALIRFNASSFSGNPGLCGENILQPCKNGSVPSAPPISPSYPLIPGGTAAASKRTSSNR---TXXXXXXXXXXXXXXXXXXXMVVVWAICR-KRKTRVGSGTRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAWEGEGLG-KLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGK-PLHWTSCLKIAEDLATGLLYIHQ--NPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWVRSVREEE--TESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDA 2241 +D + LL + + L W + + VC W GV +G R+ + L L G + ++RL LRVLS + N +SG+ P D L +L ++L DNN SG P ++ + + LS N +G IP+SL L+R+ L L +N +G IP + +SL+++++SNN L+G IP L RF SS++ G +I+ P N ++ ++P P + ++ S R + + + ++ + V +C +RK R G G S G + F E + +L F G + S+ LEDLL+ASAE LG+G G+TYKAV+E V VKRLKD G +F + ++G + H N+V L+AY+ +K+E+L+VYDYF GS+ SL+HG++ G + PL W + +KIA A G+ IH+ N + HGN+KSSN+ L S+ C++D GLT ++P + P + YRAPE + ++S +Q +DVYSFGV++LELLTGK+P + RWV SV EE E D EE++ +L IAM+CV + RP M +++++I + Sbjct: 28 EDKRALLEFLTIMQPTRSLNWNETSQVCNIWTGVTCNQDGSRIIAVRLPGVGLNGQIPPNTISRLSALRVLSLRSNLISGEFPKDFVELKDLAFLYLQDNNLSGPLPLDFSVWKNLTSVNLSNNGFNGTIPSSLSRLKRIQSLNLANNTLSGDIPDLSVLSSLQHIDLSNNYDLAGPIP--DWLRRFPFSSYT------GIDIIPPGGNYTL-----VTPPPP-----SEQTHQKPSKARFLGLSETVFLLIVIAVSIVVITALAFVLTVCYVRRKLRRGDGVISDNKLQKKGGMSPEK------------------FVSRMEDVNNRLSFFEGCN--YSFDLEDLLRASAEVLGKGTFGTTYKAVLEDATSVAVKRLKDVA-AGKRDFEQQMEIIGGIKHENVVELKAYYYSKDEKLMVYDYFSRGSVASLLHGNR--GENRIPLDWETRMKIAIGAAKGIARIHKENNGKLVHGNIKSSNIFLNSESNGCVSDLGLTAVMSP--LAPPISRQAGYRAPEVTDTRKS-SQLSDVYSFGVVLLELLTGKSPIHTTAGDEIIHLVRWVHSVVREEWTAEVFDIELLRYTNIEEEMVEMLQIAMSCVVKAADQRPKMSDLVRLIENV 608
BLAST of LR48_mrnaVigan08g185200 vs. DB:Swiss
Match: PRK1_ARATH (Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 6.584e-78 Identity = 216/628 (34.39%), Postives = 315/628 (50.16%), Query Frame = 1 Query: 397 PTRAEDDSQPLLALKSSIDVLHK---LPWRQGADVCTWKGVKDCFNGRVRKLVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVPDLSALINLKSIFLNDNNFSGEFP-SSVALLHRVKVIVLSQNHISGDIPASXXXXXXXXXXXXEDNAFTGSIPPFNQTSLRYLNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENILQPCKNGSVPSAPPISPSYPLIPGGTAAASKRTSSNRTXXXXXXXXXXXXXXXXXXXMVVVWAICRKRKTR--VGSGTRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAWEGEGLGKLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKP-LHWTSCLKIAEDLATGLLYIHQN-PGMT--HGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWVRS-VREEETESGDDPASGNEA-SEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDAR 2244 PT DS+ +L K S+ V + W + CTW GV C G V +L +E+ L+GS+D + L+ L LR LSF N G PD L LKS++L++N F G+ P + + +K + L+QN +G IP+S+ L +L L L+ N FTG IP F L LN+SNN L+G IP + ++ + F GN GL G+ + C + P I + ++ SS+R L+ ++ IL + ++ + +K R V +G S + G + A G KL F DRE + L+DLLKASAE LG G G++YKAV+ SG ++ VKR K G +EF+ H+ LGRL H NL+ + AY+ KEE+LLV D+ GSL +H +++ GKP L W + LKI + +A GL Y+HQ+ P + HG+LKSSNVLL FE LTDYGL +N + A YR+PE +R T+ DV+ G+L+LE+LTGK P + Q+ D+ WV S S D G + E ++ LL I + C E R + + ++ I + + Sbjct: 28 PTHGLSDSEAILKFKESLVVGQENALASWNAKSPPCTWSGVL-CNGGSVWRLQMENLELSGSIDIEALSGLTSLRTLSFMNNKFEGPFPDFKKLAALKSLYLSNNQFGGDIPGDAFEGMGWLKKVHLAQNKFTGQIPSSVAKLPKLLELRLDGNQFTGEIPEFEH-QLHLLNLSNNALTGPIPESLSMT--DPKVFEGNKGLYGKPLETECDS-------------PYIEHPPQSEARPKSSSRGPLVITAIVAALTILIILGVIFLLNRSYKNKKPRLAVETGPSSLQKKTGIREADQSRRDRKKADHRKGSGTTKRMGAAAGVENTKLSFLRE-DRE-KFDLQDLLKASAEILGSGCFGASYKAVLSSGQMMVVKRFKQMNNAGRDEFQEHMKRLGRLMHHNLLSIVAYYYRKEEKLLVCDFAERGSLAINLHSNQSL--GKPSLDWPTRLKIVKGVAKGLFYLHQDLPSLMAPHGHLKSSNVLLTKTFEPLLTDYGLIPLINQEKAQMHMAA---YRSPEYLQHRRI-TKKTDVWGLGILILEILTGKFP-ANFSQSSEEDLASWVNSGFHGVWAPSLFDKGMGKTSHCEGQILKLLTIGLNCCEPDVEKRLDIGQAVEKIEELK 629
BLAST of LR48_mrnaVigan08g185200 vs. DB:Swiss
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana OX=3702 GN=At2g26730 PE=1 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 3.006e-74 Identity = 142/295 (48.14%), Postives = 191/295 (64.75%), Query Frame = 1 Query: 1363 KLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSATSLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWVRSVREEE--TESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDA 2241 KLVF GG S+ LEDLL+ASAE LG+G +G++YKAV+E G V VKRLKD +EF + V+G++ HPN++PLRAY+ +K+E+LLV+D+ P GSL +L+HGS+ S G PL W + ++IA A GL ++H + + HGN+K+SN+LL + ++C++DYGL + S P Y APE R T +DVYSFGVL+LELLTGK+P Q + G D+PRWV SV EE E D EE++ LL IAMACVS VP+ RP M+EVL+MI D Sbjct: 333 KLVFTEGG--VYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDV-MASKKEFETQMEVVGKIKHPNVIPLRAYYYSKDEKLLVFDFMPTGSLSALLHGSRGS-GRTPLDWDNRMRIAITAARGLAHLHVSAKLVHGNIKASNILLHPNQDTCVSDYGLNQLFSNSS---PPNRLAGYHAPEVLE-TRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVLSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVSTVPDQRPVMQEVLRMIEDV 619 HSP 2 Score: 126.716 bits (317), Expect = 7.538e-29 Identity = 88/217 (40.55%), Postives = 126/217 (58.06%), Query Frame = 1 Query: 415 DSQPLLALKSSIDVLHKLPWRQGADVCTWKGVK-DCFNGRVRKLVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVP-DLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASXXXXXXXXXXXXEDNAFTGSIPPFNQTSLRYLNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENILQPCKNGSVPSAPPISPS 1059 + Q LL I ++L W + C W GV+ + + L L + L G + L RL +LRVLS + N LSGQ+P D S L +L+S++L N FSGEFP+S L+ + + +S N+ +G IP S+ NL L L+L +N F+G++P + L NVSNN L+G IP ++L RF+A SF+GN LCG L+PCK+ V +P SPS Sbjct: 28 EKQALLTFLQQIPHENRLQWNESDSACNWVGVECNSNQSSIHSLRLPGTGLVGQIPSGSLGRLTELRVLSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGNNGFSGNLPSIS-LGLVDFNVSNNNLNGSIP--SSLSRFSAESFTGNVDLCG-GPLKPCKSFFVSPSP--SPS 238
BLAST of LR48_mrnaVigan08g185200 vs. DB:Swiss
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana OX=3702 GN=IMK3 PE=1 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 4.859e-74 Identity = 202/586 (34.47%), Postives = 302/586 (51.54%), Query Frame = 1 Query: 541 LVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVP-DLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASXXXXXXXXXXXXEDNAFTGSIPPF--NQTSLRYLNVSNNRLSGEIPVTAALIRFNASSFSGNPGLCGENILQPCKNGSVPSAPPISPSYPLIPGGTAAASKRTSSNRTXXXXXXXXXXXXXXXXXXXMVVVWAICRKRKTRVGSGTRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAWEGEGLGKLVFCGGGDREMSYSLEDLLKASAETLGRGIIGSTYKAVMESGFIVTVKRLKDARYPGLEEFRAHIHVLGRLTHPNLVPLRAYFQA-KEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGMTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPDSMDEPSAT--SLFYRAPECRNFQRSQTQPADVYSFGVLVLELLTGKTPFQDLVQTYGSDIPRWV-RSVREEETESGDDPASGNEASE--EKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHVSSNS 2271 L L+H+NL+G + D ++ LRVLS NSLSG P L L L+ + N G PS ++ L +++ + +S N +SG IP +L N+ L L L N TG IP + SL + NVS N LSG +P T +FN+SSF GN LCG ++ PC P+ P SP +R S+R K I G + I++ ++V C RK + + G A G G GE GKLV G M+++ +DLL A+AE +G+ G+ YKA +E G V VKRL++ +EF I+VLGR+ HPNL+ LRAY+ K E+L+V+DY GSL + +H G ++W + + + + +A GL Y+H + + HGNL SSNVLL + + ++DYGL+ + + AT +L YRAPE +++ T+ DVYS GV++LELLTGK+P + L G D+P+WV +V+EE T D N+ + +++ L +A+ CV P RP ++V+ + + R E ++ S Sbjct: 226 LALDHNNLSGPILDTWGSKSLNLRVLSLDHNSLSGPFPFSLCNLTQLQDFSFSHNRIRGTLPSELSKLTKLRKMDISGNSVSGHIPETLGNISSLIHLDLSQNKLTGEIPISISDLESLNFFNVSYNNLSGPVP-TLLSQKFNSSSFVGNSLLCGYSVSTPC-----PTLPSPSPE-----------KERKPSHRNLSTKDIILIASGALLIVMLILVCVLCCLLRKKANETKAKGGEAGPGAVAAKTEKGGEAEAG---------------GETGGKLVHFDG---PMAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKSQKEFENEINVLGRIRHPNLLALRAYYLGPKGEKLVVFDYMSRGSLATFLHA---RGPDVHINWPTRMSLIKGMARGLFYLHTHANIIHGNLTSSNVLLDENITAKISDYGLSRLMTAAAGSSVIATAGALGYRAPELSKLKKANTK-TDVYSLGVIILELLTGKSPSEAL---NGVDLPQWVATAVKEEWTNEVFDLELLNDVNTMGDEILNTLKLALHCVDATPSTRPEAQQVMTQLGEIRPEETTATTS 769 HSP 2 Score: 59.3066 bits (142), Expect = 1.182e-7 Identity = 52/157 (33.12%), Postives = 75/157 (47.77%), Query Frame = 1 Query: 481 GADVCT--WKGVKDCFNGRVRKLVLEHSNLTGSLDDKILNRLDQLRVLSFKGNSLSGQVPDLSALINLKSIFLNDNNFSGEFPSSVALLHRVKVIVLSQNHISGDIPASXXXXXXXXXXXXEDNAFTGSIPP--FNQTSLRYLNVSNNRLSGEIPVT 939 G C+ W G+K C G+V + L +L G + +KI +L LR LS L+DNN G P S+ L+ ++ + L N ++G IPASL L L L +N + IPP + + L LN+S N LSG+IPV+ Sbjct: 85 GFSACSGGWAGIK-CAQGQVIVIQLPWKSLGGRISEKI-GQLQALRKLS-----------------------LHDNNLGGSIPMSLGLIPNLRGVQLFNNRLTGSIPASLGVSHFLQTLDLSNNLLSEIIPPNLADSSKLLRLNLSFNSLSGQIPVS 216 The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan08g185200 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >LR48_mrnaVigan08g185200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g185200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g185200; organism=Vigna angularis; type=mRNA; length=4417bpback to top protein sequence of LR48_mrnaVigan08g185200_Va_Jingnong6_v1.1 >LR48_mrnaVigan08g185200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g185200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g185200_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=780bpback to top mRNA from alignment at Chr_8-CM003378.1:28271625..28276041+ Legend: polypeptidestart_codonexonCDSintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.>LR48_mrnaVigan08g185200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g185200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g185200; organism=Vigna angularis; type=mRNA; length=4417bp; location=Sequence derived from: Chr_8-CM003378.1:28271625..28276041+ (Vigna angularisback to top Coding sequence (CDS) from alignment at Chr_8-CM003378.1:28271625..28276041+ >LR48_mrnaVigan08g185200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan08g185200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan08g185200; organism=Vigna angularis; type=CDS; length=2343bp; location=Sequence derived from: Chr_8-CM003378.1:28271625..28276041+ (Vigna angularisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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