LR48_mrnaVigan11g027500

Transcript Overview
NameLR48_mrnaVigan11g027500
Unique NameLR48_mrnaVigan11g027500_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length1047
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_11-CM003381.1supercontigChr_11-CM003381.1:3219792..3220838 +Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR347Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
anasL0157Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0924Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1306Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR417Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0479Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR388Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspvR356Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR291Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR345Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR352Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR267Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR380Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR275Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR312Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr10.1335Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.010G105600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_021473Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014659887.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_012718694.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun10g139200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cr_18303.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_20525.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_17770Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan11g027500gene-LR48_Vigan11g027500_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g027500LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1-start_codon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:3219792..3219794LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1-start_codon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:3219792..3219794Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1-exon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:3219792..3220838LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1-exon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:3219792..3220838Vigna angularisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1-CDS-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:3219792..3220838LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1-CDS-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:3219792..3220838Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1-stop_codon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:3220836..3220838LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1-stop_codon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:3220836..3220838Vigna angularisstop_codon


Homology
[Close]
BLAST of LR48_mrnaVigan11g027500 vs. DB:Swiss
Match: SUFE1_ARATH (SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SUFE1 PE=1 SV=2)

HSP 1 Score: 342.813 bits (878), Expect = 1.508e-115
Identity = 196/295 (66.44%), Postives = 224/295 (75.93%), Query Frame = 1 
Query:  196 LQPIEDLPPKLQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLEPHFKTNDNKVQGCVSQVWVRAYLDTNGHVVYEADSDSVLTKGLAALLVQGLSGRPVSEIIRVTPDFVTLLGLQQSLTPSRNNGFLNMLKLMQRKAFMLYVE--------AEKGGEFTEMKSPEMNSDXXXXXXXXXXXXXXXXXXXXXLDSEGG---VELGGRGKRIRXXXXXXXXXXXXXXXDVSYQHAGHAGVRGS---DGETHFNVRVVSKEFEGKSLVKRHRLIYGLLQEELETGLHALSIEAKTPAEV 1038
            LQPIE+LPPKLQEIV LFQSV EPKAKYEQL+FYGKNL PL+  FKT +NKV+GCVSQVWVRA+ D   +VVYEADSDSVLTKGLAALLV+GLSGRPV EI+R+TPDF  LLGLQQSL+PSRNNG LNMLKLMQ+KA  L V+              F  +   +  ++    +     +  E    +   DSE G   V LG RG RIREKL+KEL+PVELEVEDVSYQHAGHA VRGS   DGETHFN+R+VS  F+GKSLVKRHRLIY LLQ+EL++GLHALSI AKTPAEV
Sbjct:   77 LQPIEELPPKLQEIVKLFQSVQEPKAKYEQLMFYGKNLTPLDSQFKTRENKVEGCVSQVWVRAFFDEERNVVYEADSDSVLTKGLAALLVKGLSGRPVPEILRITPDFAVLLGLQQSLSPSRNNGLLNMLKLMQKKALHLEVKGEEDSSSGESSESSFVSIPETKDEANVPEVDLESKPDLVEDLGTEKIDDSESGSNVVALGSRGMRIREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVSDAFQGKSLVKRHRLIYDLLQDELKSGLHALSIVAKTPAEV 371
[Close]
BLAST of LR48_mrnaVigan11g027500 vs. DB:Swiss
Match: Y1419_SYNY3 (Uncharacterized SufE-like protein slr1419 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1419 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 6.109e-43
Identity = 74/132 (56.06%), Postives = 95/132 (71.97%), Query Frame = 1 
Query:  214 LPPKLQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLEPHFKTNDNKVQGCVSQVWVRAYLDTNGHVVYEADSDSVLTKGLAALLVQGLSGRPVSEIIRVTPDFVTLLGLQQSLTPSRNNGFLNMLKLMQRKAF 609
            LPP L +IV  FQ   +PK +YEQLL+YGK L+P+    K   NKVQGCVSQV++ A L+ +G V+Y+ DSD+ L KGL ALL+QGL+G   +EI+ +TPDF+   GLQ SLTPSR NGF N+ K+MQ KA 
Sbjct:   18 LPPNLAKIVERFQRHTDPKKRYEQLLWYGKKLEPMMEEGKIAANKVQGCVSQVYITADLE-DGKVMYQGDSDAQLVKGLVALLIQGLNGLTPTEIVELTPDFIEATGLQVSLTPSRANGFYNIFKMMQTKAI 148
[Close]
BLAST of LR48_mrnaVigan11g027500 vs. DB:Swiss
Match: BOLA1_ARATH (Protein BOLA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BOLA1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.209e-27
Identity = 68/95 (71.58%), Postives = 82/95 (86.32%), Query Frame = 1 
Query:  754 GGVELGGRGKRIRXXXXXXXXXXXXXXXDVSYQHAGHAGVRG-SDGETHFNVRVVSKEFEGKSLVKRHRLIYGLLQEELETGLHALSIEAKTPAE 1035
            G +E   R  R+REKLQKELEPVEL +EDVSYQHAGHAG++G +D ETHFNV++VSK FEG +LVKRHRL+Y LL+EEL+TGLHALSI +KTP+E
Sbjct:   63 GAIE--NRASRMREKLQKELEPVELVIEDVSYQHAGHAGMKGRTDDETHFNVKIVSKGFEGMNLVKRHRLVYHLLREELDTGLHALSIVSKTPSE 155
[Close]
BLAST of LR48_mrnaVigan11g027500 vs. DB:Swiss
Match: SUFE_PECCP (Cysteine desulfuration protein SufE OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=sufE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 3.261e-17
Identity = 49/135 (36.30%), Postives = 73/135 (54.07%), Query Frame = 1 
Query:  220 PKLQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLEPHFKTNDNKVQGCVSQVWVRAYLDTNGHVVYEADSDSVLTKGLAAL---LVQGLSGRPVSEIIRVTPDFVTLLGLQQSLTPSRNNGFLNMLKLMQRKAFML 615
            P+ Q++   F    + + KY  ++  G+ L PL   ++  DN + GC SQVW+ A  D  G +V   DSD+ + KGL A+   L QGL+ + + E + V P F   L L Q LTPSR+ G   ML+ ++  A  L
Sbjct:    5 PEPQKLARNFARCNDWEEKYLYIIELGERLDPLPDEWRNPDNLISGCQSQVWIVAQPDEQGVIVLHGDSDAAIVKGLIAVVFSLYQGLTAQEIVE-LDVRP-FFESLALNQHLTPSRSQGLEAMLRAIRAHAAAL 137
[Close]
BLAST of LR48_mrnaVigan11g027500 vs. DB:Swiss
Match: SUFE_DICD3 (Cysteine desulfuration protein SufE OS=Dickeya dadantii (strain 3937) OX=198628 GN=sufE PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.072e-17
Identity = 50/135 (37.04%), Postives = 73/135 (54.07%), Query Frame = 1 
Query:  220 PKLQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLEPHFKTNDNKVQGCVSQVWVRAYLDTNGHVVYEADSDSVLTKGLAAL---LVQGLSGRPVSEIIRVTPDFVTLLGLQQSLTPSRNNGFLNMLKLMQRKAFML 615
            P  Q+++  F      + KY  ++  G  L PL    + + N+V GC SQVW+    +  G+VV   DSD+ + KGL A+   L QGLS R + E + V P F + L L Q LTPSR+ G   ML+ ++ +A  L
Sbjct:    5 PDPQKLLRNFSRCSNWEEKYLYIIELGAGLAPLSDAQRQDGNRVSGCQSQVWIDLASNEQGNVVLHGDSDAAIVKGLIAIVFSLYQGLSVREIVE-LDVRPFFAS-LALTQHLTPSRSQGLEAMLRAVRARASAL 137
[Close]
BLAST of LR48_mrnaVigan11g027500 vs. DB:Swiss
Match: YA00_RHIME (Uncharacterized SufE-like protein R01000 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=R01000 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 7.234e-16
Identity = 41/131 (31.30%), Postives = 75/131 (57.25%), Query Frame = 1 
Query:  226 LQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLEPHFKTNDNKVQGCVSQVWVRAYLDTNGH---VVYEADSDSVLTKGLAALLVQGLSGRPVSEIIRVTP-DFVTLLGLQQSLTPSRNNGFLNMLKLMQRKA 606
            L +I+  F  + E + +Y  ++  GKNL  +    +T++NKVQGC SQVW+  +   +     + +E +SD+ + +GL A+++   SG+  SEI R+   D    +GL + L+  R NG  +M++ ++ +A
Sbjct:    4 LDQIIDDFAFLDEWEDRYRYVIELGKNLPEMPEVSRTSENKVQGCASQVWLVTHATGDAEDPLLTFEGESDAHIVRGLVAIVLAIFSGKRASEITRIDALDIFGKIGLIEHLSSQRANGLRSMIRRIKSEA 134
[Close]
BLAST of LR48_mrnaVigan11g027500 vs. DB:Swiss
Match: BOL1_YEAST (BolA-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BOL1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.393e-15
Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 1 
Query:  844 SYQHAGHAGVRGS-DGETHFNVRVVSKEFEGKSLVKRHRLIYGLLQEEL--ETGLHALSIEAKTPAEVE 1041
            S++H GHAGV+G+   ETHF + +VSK+FEG  L +RHR++Y LLQ+E+    G+HAL +  KTP E E
Sbjct:   38 SHKHKGHAGVQGNVSAETHFRIEMVSKKFEGLKLPQRHRMVYSLLQDEMAQANGIHALQLSLKTPQEYE 106
[Close]
BLAST of LR48_mrnaVigan11g027500 vs. DB:Swiss
Match: SUFE_YERE8 (Cysteine desulfuration protein SufE OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) OX=393305 GN=sufE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.687e-15
Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 1 
Query:  220 PKLQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLEPHFKTNDNKVQGCVSQVWVRAYLDTNGHVVYEADSDSVLTKGLAA---LLVQGLSGRPVSEIIRVTPDFVTLLGLQQSLTPSRNNGFLNMLKLMQRKAFML 615
            P   +++  F      + KY  ++  G  L PL    +  DN + GC SQVW+     T G VV+  DSD+ + KGL     +L QGL+ + + + + V P F   L L Q LTPSR+ G   M++ ++ KA +L
Sbjct:    5 PDKDKLIRNFSRCLNWEEKYLYVIELGAQLPPLTEQQRQPDNLISGCQSQVWIAMSTSTEGQVVFAGDSDAAIVKGLVVVVFILYQGLTPQQIID-LDVRPFFAD-LALSQHLTPSRSQGLEAMIRAIRAKAAVL 137
[Close]
BLAST of LR48_mrnaVigan11g027500 vs. DB:Swiss
Match: SUFE_PECAS (Cysteine desulfuration protein SufE OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=sufE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.254e-15
Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = 1 
Query:  220 PKLQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLEPHFKTNDNKVQGCVSQVWVRAYLDTNGHVVYEADSDSVLTKGLAAL---LVQGLSGRPVSEIIRVTPDFVTLLGLQQSLTPSRNNGFLNMLKLMQRKAFML 615
            P+ Q++   F    + + KY  ++  G+ L PL   ++  +N + GC SQVW+    D  G ++   DSD+ + KGL A+   L QGL+ + + E + V P F   L L Q LTPSR+ G   ML+ ++  A  L
Sbjct:    5 PEPQKLARNFARCNDWEEKYLYVIELGERLDPLPDEWRNPENLISGCQSQVWIVTQPDEQGVLILHGDSDAAIVKGLIAVVFSLYQGLTAQEIVE-LDVRP-FFESLALNQHLTPSRSQGLEAMLRAIRAHAAAL 137
[Close]
BLAST of LR48_mrnaVigan11g027500 vs. DB:Swiss
Match: SUFE2_ARATH (SufE-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SUFE2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.016e-14
Identity = 44/136 (32.35%), Postives = 77/136 (56.62%), Query Frame = 1 
Query:  223 KLQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLEPHFKTNDNKVQGCVSQVWVRAYLDTNGHVVYEADSDSVLTKGLAALLVQGLSGRPVSEIIRVTPDFVTLL-----GLQQSLTPSRNNGFLNMLKLMQRKAFML 615
            KL+ +V  F+S+ EP  + ++LL Y   L PL+   + ++N+V GC +QVW+   +D  G + ++ADSDS ++KG  + L+  L G    E++ V  + ++ +     G +Q    SR N + N+L  MQ++   L
Sbjct:   77 KLRILVSEFRSLTEPIDRVKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDEFGRMRFKADSDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQ----SRVNTWHNVLMSMQKRTMTL 208
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan11g027500 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
SUFE1_ARATH1.508e-11566.44SufE-like protein 1, chloroplastic/mitochondrial O... [more]
Y1419_SYNY36.109e-4356.06Uncharacterized SufE-like protein slr1419 OS=Synec... [more]
BOLA1_ARATH8.209e-2771.58Protein BOLA1, chloroplastic OS=Arabidopsis thalia... [more]
SUFE_PECCP3.261e-1736.30Cysteine desulfuration protein SufE OS=Pectobacter... [more]
SUFE_DICD34.072e-1737.04Cysteine desulfuration protein SufE OS=Dickeya dad... [more]
YA00_RHIME7.234e-1631.30Uncharacterized SufE-like protein R01000 OS=Rhizob... [more]
BOL1_YEAST2.393e-1552.17BolA-like protein 1 OS=Saccharomyces cerevisiae (s... [more]
SUFE_YERE82.687e-1534.07Cysteine desulfuration protein SufE OS=Yersinia en... [more]
SUFE_PECAS3.254e-1534.07Cysteine desulfuration protein SufE OS=Pectobacter... [more]
SUFE2_ARATH1.016e-1432.35SufE-like protein 2, chloroplastic OS=Arabidopsis ... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.300.90coord: 258..348
e-value: 2.4E-37
score: 129.1
NoneNo IPR availableGENE3D3.90.1010.10coord: 71..213
e-value: 6.8E-48
score: 163.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..259
NoneNo IPR availableSUPERFAMILY82649SufE/NifUcoord: 70..202
IPR002634BolA proteinPFAMPF01722BolAcoord: 267..345
e-value: 4.1E-31
score: 107.0
IPR003808Fe-S metabolism associated domain, SufE-likePFAMPF02657SufEcoord: 82..201
e-value: 1.1E-36
score: 125.2
IPR036065BolA-like superfamilySUPERFAMILY82657BolA-likecoord: 261..347

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g027500; organism=Vigna angularis; type=mRNA; length=1047bp
ATGGCTACCAATTCGATTTCCTCATCCTCCTTTCGATTTCTCACTACCAG
AATCCCTCACTCCCTCTTCCGCAGAACCCCAACTCTCCTTCCTCCTCTAA
CAAAACCCCTCTTCTCTAAATCCATCACCTTCCAGAGACTTCCATCATCA
TCTCCaccgtcatcatcatcatcaccgtCGCCGTCTTCCACATCCCTTCA
ACCCATCGAAGACCTCCCTCCGAAGCTCCAAGAAATCGTTCACCTTTTCC
AATCCGTCCCCGAACCCAAGGCCAAATACGAACAGCTCCTCTTCTATGGC
AAAAACCTCAAACCCCTCGAACCCCACTTCAAAACCAACGACAACAAGGT
CCAAGGTTGCGTCTCCCAGGTCTGGGTCCGAGCCTACCTGGACACCAACG
GCCACGTCGTCTACGAAGCCGACTCCGACTCCGTCCTCACCAAAGGCCTC
GCCGCGTTGCTCGTTCAGGGCCTCTCGGGTCGACCCGTCAGTGAAATCAT
TCGGGTCACACCCGATTTCGTCACGCTGTTAGGGTTACAGCAGAGCCTAA
CCCCATCAAGGAACAACGGGTTCTTGAACATGCTTAAATTGATGCAGAGA
AAGGCGTTTATGCTGTACGTGGAAGCTGAAAAGGGTGGTGAGTTCACTGA
AATGAAGTCACCCGAGATGAATTCTGATAGCGTTGTTGAGAATTCTTCAA
GGGGTGGAGAAAGTTCTGAACTTGGTGAGGGTGATGTTGGTTTGGATTCT
GAGGGTGGTGTGGAATTGGGAGGGAGGGGGAAGAGAATAAGGGAGAAGTT
GCAGAAGGAGCTTGAGCCTGTTGAGTTGGAGGTTGAGGATGTGTCTTATC
AGCATGCGGGGCATGCTGGGGTTAGAGGGAGTGATGGAGAAACGCATTTC
AATGTTAGAGTTGTGTCTAAGGAGTTTGAAGGGAAGAGTTTGGTTAAGAG
GCATAGGCTTATTTATGGCCTTCTGCAAGAGGAGTTGGAGACTGGACTCC
ATGCCTTGTCGATCGAGGCCAAGACACCGGCTGAAGTTGAAGGATGA
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protein sequence of LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1

>LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=348bp
MATNSISSSSFRFLTTRIPHSLFRRTPTLLPPLTKPLFSKSITFQRLPSS
SPPSSSSSPSPSSTSLQPIEDLPPKLQEIVHLFQSVPEPKAKYEQLLFYG
KNLKPLEPHFKTNDNKVQGCVSQVWVRAYLDTNGHVVYEADSDSVLTKGL
AALLVQGLSGRPVSEIIRVTPDFVTLLGLQQSLTPSRNNGFLNMLKLMQR
KAFMLYVEAEKGGEFTEMKSPEMNSDSVVENSSRGGESSELGEGDVGLDS
EGGVELGGRGKRIREKLQKELEPVELEVEDVSYQHAGHAGVRGSDGETHF
NVRVVSKEFEGKSLVKRHRLIYGLLQEELETGLHALSIEAKTPAEVEG
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mRNA from alignment at Chr_11-CM003381.1:3219792..3220838+

Legend: polypeptidestart_codonexonCDSstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g027500; organism=Vigna angularis; type=mRNA; length=1047bp; location=Sequence derived from: Chr_11-CM003381.1:3219792..3220838+ (Vigna angularis
ATGGCTACCAATTCGATTTCCTCATCCTCCTTTCGATTTCTCACTACCAG
AATCCCTCACTCCCTCTTCCGCAGAACCCCAACTCTCCTTCCTCCTCTAA
CAAAACCCCTCTTCTCTAAATCCATCACCTTCCAGAGACTTCCATCATCA
TCTCCaccgtcatcatcatcatcaccgtCGCCGTCTTCCACATCCCTTCA
ACCCATCGAAGACCTCCCTCCGAAGCTCCAAGAAATCGTTCACCTTTTCC
AATCCGTCCCCGAACCCAAGGCCAAATACGAACAGCTCCTCTTCTATGGC
AAAAACCTCAAACCCCTCGAACCCCACTTCAAAACCAACGACAACAAGGT
CCAAGGTTGCGTCTCCCAGGTCTGGGTCCGAGCCTACCTGGACACCAACG
GCCACGTCGTCTACGAAGCCGACTCCGACTCCGTCCTCACCAAAGGCCTC
GCCGCGTTGCTCGTTCAGGGCCTCTCGGGTCGACCCGTCAGTGAAATCAT
TCGGGTCACACCCGATTTCGTCACGCTGTTAGGGTTACAGCAGAGCCTAA
CCCCATCAAGGAACAACGGGTTCTTGAACATGCTTAAATTGATGCAGAGA
AAGGCGTTTATGCTGTACGTGGAAGCTGAAAAGGGTGGTGAGTTCACTGA
AATGAAGTCACCCGAGATGAATTCTGATAGCGTTGTTGAGAATTCTTCAA
GGGGTGGAGAAAGTTCTGAACTTGGTGAGGGTGATGTTGGTTTGGATTCT
GAGGGTGGTGTGGAATTGGGAGGGAGGGGGAAGAGAATAAGGGAGAAGTT
GCAGAAGGAGCTTGAGCCTGTTGAGTTGGAGGTTGAGGATGTGTCTTATC
AGCATGCGGGGCATGCTGGGGTTAGAGGGAGTGATGGAGAAACGCATTTC
AATGTTAGAGTTGTGTCTAAGGAGTTTGAAGGGAAGAGTTTGGTTAAGAG
GCATAGGCTTATTTATGGCCTTCTGCAAGAGGAGTTGGAGACTGGACTCC
ATGCCTTGTCGATCGAGGCCAAGACACCGGCTGAAGTTGAAGGATGA
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Coding sequence (CDS) from alignment at Chr_11-CM003381.1:3219792..3220838+

>LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g027500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g027500; organism=Vigna angularis; type=CDS; length=1047bp; location=Sequence derived from: Chr_11-CM003381.1:3219792..3220838+ (Vigna angularis
ATGGCTACCAATTCGATTTCCTCATCCTCCTTTCGATTTCTCACTACCAG
AATCCCTCACTCCCTCTTCCGCAGAACCCCAACTCTCCTTCCTCCTCTAA
CAAAACCCCTCTTCTCTAAATCCATCACCTTCCAGAGACTTCCATCATCA
TCTCCaccgtcatcatcatcatcaccgtCGCCGTCTTCCACATCCCTTCA
ACCCATCGAAGACCTCCCTCCGAAGCTCCAAGAAATCGTTCACCTTTTCC
AATCCGTCCCCGAACCCAAGGCCAAATACGAACAGCTCCTCTTCTATGGC
AAAAACCTCAAACCCCTCGAACCCCACTTCAAAACCAACGACAACAAGGT
CCAAGGTTGCGTCTCCCAGGTCTGGGTCCGAGCCTACCTGGACACCAACG
GCCACGTCGTCTACGAAGCCGACTCCGACTCCGTCCTCACCAAAGGCCTC
GCCGCGTTGCTCGTTCAGGGCCTCTCGGGTCGACCCGTCAGTGAAATCAT
TCGGGTCACACCCGATTTCGTCACGCTGTTAGGGTTACAGCAGAGCCTAA
CCCCATCAAGGAACAACGGGTTCTTGAACATGCTTAAATTGATGCAGAGA
AAGGCGTTTATGCTGTACGTGGAAGCTGAAAAGGGTGGTGAGTTCACTGA
AATGAAGTCACCCGAGATGAATTCTGATAGCGTTGTTGAGAATTCTTCAA
GGGGTGGAGAAAGTTCTGAACTTGGTGAGGGTGATGTTGGTTTGGATTCT
GAGGGTGGTGTGGAATTGGGAGGGAGGGGGAAGAGAATAAGGGAGAAGTT
GCAGAAGGAGCTTGAGCCTGTTGAGTTGGAGGTTGAGGATGTGTCTTATC
AGCATGCGGGGCATGCTGGGGTTAGAGGGAGTGATGGAGAAACGCATTTC
AATGTTAGAGTTGTGTCTAAGGAGTTTGAAGGGAAGAGTTTGGTTAAGAG
GCATAGGCTTATTTATGGCCTTCTGCAAGAGGAGTTGGAGACTGGACTCC
ATGCCTTGTCGATCGAGGCCAAGACACCGGCTGAAGTTGAAGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002634BolA
IPR003808Fe-S_metab-assoc_dom
IPR036065BolA-like_sf