LR48_mrnaVigan11g040000

Transcript Overview
NameLR48_mrnaVigan11g040000
Unique NameLR48_mrnaVigan11g040000_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length3314
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_11-CM003381.1supercontigChr_11-CM003381.1:4948115..4951428 +Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR319Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR325Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR341Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasR157Vigna angularis Jingnong 6 genome v1.1Vigna angularis
ascaiR396Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0482Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0523Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR365Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR325Pisum sativum Cameor genome v1aPisum sativum
aspvR349Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR355Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR376Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR378Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR384Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR290Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR317Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR337Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR351Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR355Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR344Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR358Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR279Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR302Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR340Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR348Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR352Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR378Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR273Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR297Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR283Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR305Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.008G072300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_021255Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_022786345.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan11g040000gene-LR48_Vigan11g040000_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g040000LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-start_codon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4948115..4948117LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-start_codon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4948115..4948117Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-exon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4948115..4948270LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-exon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4948115..4948270Vigna angularisexon
LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-exon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4948799..4949635LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-exon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4948799..4949635Vigna angularisexon
LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-exon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4949742..4950467LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-exon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4949742..4950467Vigna angularisexon
LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-exon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4950574..4951428LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-exon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4950574..4951428Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-intron-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4948271..4948798LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-intron-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4948271..4948798Vigna angularisintron
LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-intron-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4949636..4949741LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-intron-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4949636..4949741Vigna angularisintron
LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-intron-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4950468..4950573LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-intron-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4950468..4950573Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS13601CDS13601_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-stop_codon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4951426..4951428LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1-stop_codon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:4951426..4951428Vigna angularisstop_codon


Homology
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan11g040000 vs.
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 11..298
e-value: 4.6E-15
score: 56.9
coord: 299..559
e-value: 8.7E-15
score: 56.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 560..841
e-value: 4.2E-8
score: 34.5
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 103..545
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 574..817

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g040000; organism=Vigna angularis; type=mRNA; length=3314bp
ATGCTTGTCACCGACATGGAGAAGATCTTGACGAATGGGAaaggtgaaga
tgaagatgttgagaGGAACCCGGTCAGCAAGAAAATGGCCAAGATCAAGA
ACAAGTCAGCCAAGGTTATTGAGAGGTCGACTGATGCAAAGGAGAAGTCA
ACCAAGGTGAAAAATAAGACGACCACAGTAAAAAACAAGTCGGCCATAAA
GAAAGTGTAGAATCCGACTCTTAATGAAAGAAGCAAGCTCGGTGTGGAAT
AATGCATATGGAAAAGTTGGAATGTATGAAAGAcagaaaaaacattttaa
gtTTACATAGAGTTTTGTTAGGGTAAACTTAAATGCAATAGAATTAAATg
gattgtttatttatttaggaGTTCTGATTATTTTAGAGTGCAAAGGTCAG
CCCTTTAATGCATTGGTTATTAGACAATCATagataataattgtttttta
gtgGTAGAGTTCATGGCTTAGATATGAAAAGCCAAATGTGAGTCCTATAA
GTTGTAGCGTCGTTGACATGAAAAATTGTAGCAAACAAGTAGCAGGAAGT
GAACAAGTTTTTCCCATAAAGGTTTAGTTTTACTAAAAATACGCACCTTT
GTTTGCCTCTTTCTCTGcgtatatattttatgtttcagCTTTTAATACGC
AGCCCTtgctttttatttgattttctttcacTAGGACATTCGCAACCTTG
AAGTACTAATGCTTGGCTGGAAACACACATTGGAGTTAAGCACAATGTTG
GAAGAATCTATGGACAACctcaaatatttaaatgatattCACCTTGTATT
TGATGTTGATGAGAACGAAAGACATGATATGCCCATTCAAATACTCATGA
AGATGCCCAATTTAACAACAATGAGTATACAGCTTTGCAGTTCCCCCGAG
GTATTTCAAACTCAAATCCCAGAAAATGTTGAGAAAATTACACACTTGAA
AACATTTATACTGCGTTATGTGTCGAAACTCCAGTCCATTGTGTCGGAGA
ACTCTTCATGGTTAAACGTGATTTGTGCCAGGCTTCAACAATTATATGTT
CTAGATTGTCCTGATTTGAAAACATTAGTGCATTCTACGCCTTCAGTGTC
TTTCAGGTATGTGAAAGAAATATACATAGACAACTGCCAAGATATGAAGT
ATTTATTCCCATTGTCAGCAGTGAATAAGTTAGAGAACCTTGAGTATATA
GAAGTAAAGAACTGTAAATCAATGGAAGCAATAGTCTTGAAAGATAAGGA
TGACATTTCAGAAGAGATAAAATTACAGAAGCTAAAGTGGACGGATTTAT
ATAATTTGTCAAACTTGGAATGCTTCTATTCAGACAATTTGCAGTTACCC
TCCTTCATGCAAGTGAACATATGGAAGTGCCCCAAGATGAAGTTTTTCTA
TAGAGGAGACAAACAACCGAATTCATCATTTAGAGGGATTCAAGCTTTAA
ACCTCTCAAGTGATGAATTGGCCTGCAACCAAGATATTAACTCTTTGGTA
GAAAAGGTGTTCTTGCATCAGGTAACAACTTTCCGATTCTGAATCAATTA
ATTATGACTCTTGTTTAAGTGaatttaaagaatataaaacaagaaatgtG
ATGATAAATGTATTGTAATATTTACAGGAGTTTTCTGAAGCCGTGCACAC
GGACTGTTATTCTGATTATCTTGAGTTACAATGTGACCTGGTTTCTGAAA
TTGATATGCTTAACAAATTGTTTGCCAATTTGGAAACTTTGAAGCTGCAG
AAGTGCACTGTATCATATGCAATTCCATCTTCTATTCTTGCTCTTTTAAA
GAACTTAAAAGAGTTGGAAGTACGAGATAGCGACCAAGTAGAGACAATTT
TTGATACAAGTAGAGACAACTTAAATGATGACACTGAGATTAAGGAAACA
GAATTCCACTTGAAGATATTGTCTTTAAATGGGCTATCAAAGCTGACGCA
TGTGTGGAAAAAGGACACTCACAAAATTATCATCTTTTGCAATCTACAAG
AGGTTGTTGTCAGTGATTGTGCAAAGCTGCAAACTTTATTTCCTACTTCC
TTGGAAAAAAGTCTCAAGGATCTTAAAAGGCTTAAAATAGAAAACTGTAA
AAAATTTCAAGACTTTGTTGAACAGGaggaaacaatatttgtaacAGAAA
GGTTTGTGTTCCCTTGTCTAGAGGATTTGGAACTCAAAGACTTGCCCCAG
GTAACTTGCCCTAACATGTTCACTCTGGAATTCCCCTCCCTAAAATTCTT
ATCTGTGAGGGATTGTGATGGGTTAGGGTTATTTCAAAGTGTATATGATC
CCATGGGTGAGGGTACTTCAAGCAGGACACTTCCTCTCATCTCAGACCCA
AATGTAAGTAAAGCATAATAGAATCTTTActtccaatttttttctttttt
catattttatctaATTCGCATACCTTTCAATGCTATTTGGTTTTGGCTCC
AATTATTAGGTCATTTCCAACCTGGTGAAACTGACTCTTGATTGGAAACA
AATTTTAGCATTAAGCTTATGGTTTAAGTCACAACAATCTACAGAAGGCC
TCACAAATTTAAAAAGCATTTCCTGGTGTTTCTTTCGTGCCAAGGAGAAT
GAAATGCCCATGTTGCCTGTTGAAATACTCAAGGCTCCAATTTTAGAAGA
AATGGATATAAGCAAATGTGAAAGTCTCGCGAATTTCCTTgctcaaaacc
ctaaaattggaGAGGAGGAGATGCTGGGACAGTTAACAAAATTGAAGCTA
CGCAATGTGTCCGTTACACAGTTCTCTGAGTTAGAGTACTCCTCAAGCTT
AAACATATTTAAGAGGCTCCACAAATTATTTGTTGCCCGTTGTCCCCATT
TGGCAACATTAGGAATACATTCCACTTCTACAATGTCTTTCTCTTGTCTG
AAagaagtaaatatatataaatgtccAAAGTTGAAGTATTTATTTACATC
TTCAGCTGCCAAAATGTTAATGAATCTTCAGGAGATTAGTGTCACCGGAT
GTGAATTACTAACAGAAATAGTTGTTAAAGAGGGAGATGCAACTTCTGAA
GCCATTGAATTTGAGCGACTCCACACCATTCATCTAGAATCTTTAACATG
TTTAGTATGCTTTTATTCTGGGAGTAACACTCTGCAATTATCATCTTTGA
ATTTCCCATCCTTGAAAAACGTGTGGATTAAAGAATGCTTCAGCACCAAA
ATTTTTCGTCGTCATGATAATATTCCTCCAAAATGTAGGGTTCATATAGA
TGGAAGTTTTAAAGGTGATACAAAAGTTGTGATCATGGAACAGTCTGAGG
AGGAGGCATCCTGA
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protein sequence of LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1

>LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=857bp
MLVTDMEKILTNGKGEDEDVERNPVSKKMAKIKNKSAKVIERSTDAKEKS
TKDIRNLEVLMLGWKHTLELSTMLEESMDNLKYLNDIHLVFDVDENERHD
MPIQILMKMPNLTTMSIQLCSSPEVFQTQIPENVEKITHLKTFILRYVSK
LQSIVSENSSWLNVICARLQQLYVLDCPDLKTLVHSTPSVSFRYVKEIYI
DNCQDMKYLFPLSAVNKLENLEYIEVKNCKSMEAIVLKDKDDISEEIKLQ
KLKWTDLYNLSNLECFYSDNLQLPSFMQVNIWKCPKMKFFYRGDKQPNSS
FRGIQALNLSSDELACNQDINSLVEKVFLHQEFSEAVHTDCYSDYLELQC
DLVSEIDMLNKLFANLETLKLQKCTVSYAIPSSILALLKNLKELEVRDSD
QVETIFDTSRDNLNDDTEIKETEFHLKILSLNGLSKLTHVWKKDTHKIII
FCNLQEVVVSDCAKLQTLFPTSLEKSLKDLKRLKIENCKKFQDFVEQEET
IFVTERFVFPCLEDLELKDLPQVTCPNMFTLEFPSLKFLSVRDCDGLGLF
QSVYDPMGEGTSSRTLPLISDPNVISNLVKLTLDWKQILALSLWFKSQQS
TEGLTNLKSISWCFFRAKENEMPMLPVEILKAPILEEMDISKCESLANFL
AQNPKIGEEEMLGQLTKLKLRNVSVTQFSELEYSSSLNIFKRLHKLFVAR
CPHLATLGIHSTSTMSFSCLKEVNIYKCPKLKYLFTSSAAKMLMNLQEIS
VTGCELLTEIVVKEGDATSEAIEFERLHTIHLESLTCLVCFYSGSNTLQL
SSLNFPSLKNVWIKECFSTKIFRRHDNIPPKCRVHIDGSFKGDTKVVIME
QSEEEAS
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mRNA from alignment at Chr_11-CM003381.1:4948115..4951428+

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g040000; organism=Vigna angularis; type=mRNA; length=3314bp; location=Sequence derived from: Chr_11-CM003381.1:4948115..4951428+ (Vigna angularis
ATGCTTGTCACCGACATGGAGAAGATCTTGACGAATGGGAaaggtgaaga
tgaagatgttgagaGGAACCCGGTCAGCAAGAAAATGGCCAAGATCAAGA
ACAAGTCAGCCAAGGTTATTGAGAGGTCGACTGATGCAAAGGAGAAGTCA
ACCAAGGTGAAAAATAAGACGACCACAGTAAAAAACAAGTCGGCCATAAA
GAAAGTGTAGAATCCGACTCTTAATGAAAGAAGCAAGCTCGGTGTGGAAT
AATGCATATGGAAAAGTTGGAATGTATGAAAGAcagaaaaaacattttaa
gtTTACATAGAGTTTTGTTAGGGTAAACTTAAATGCAATAGAATTAAATg
gattgtttatttatttaggaGTTCTGATTATTTTAGAGTGCAAAGGTCAG
CCCTTTAATGCATTGGTTATTAGACAATCATagataataattgtttttta
gtgGTAGAGTTCATGGCTTAGATATGAAAAGCCAAATGTGAGTCCTATAA
GTTGTAGCGTCGTTGACATGAAAAATTGTAGCAAACAAGTAGCAGGAAGT
GAACAAGTTTTTCCCATAAAGGTTTAGTTTTACTAAAAATACGCACCTTT
GTTTGCCTCTTTCTCTGcgtatatattttatgtttcagCTTTTAATACGC
AGCCCTtgctttttatttgattttctttcacTAGGACATTCGCAACCTTG
AAGTACTAATGCTTGGCTGGAAACACACATTGGAGTTAAGCACAATGTTG
GAAGAATCTATGGACAACctcaaatatttaaatgatattCACCTTGTATT
TGATGTTGATGAGAACGAAAGACATGATATGCCCATTCAAATACTCATGA
AGATGCCCAATTTAACAACAATGAGTATACAGCTTTGCAGTTCCCCCGAG
GTATTTCAAACTCAAATCCCAGAAAATGTTGAGAAAATTACACACTTGAA
AACATTTATACTGCGTTATGTGTCGAAACTCCAGTCCATTGTGTCGGAGA
ACTCTTCATGGTTAAACGTGATTTGTGCCAGGCTTCAACAATTATATGTT
CTAGATTGTCCTGATTTGAAAACATTAGTGCATTCTACGCCTTCAGTGTC
TTTCAGGTATGTGAAAGAAATATACATAGACAACTGCCAAGATATGAAGT
ATTTATTCCCATTGTCAGCAGTGAATAAGTTAGAGAACCTTGAGTATATA
GAAGTAAAGAACTGTAAATCAATGGAAGCAATAGTCTTGAAAGATAAGGA
TGACATTTCAGAAGAGATAAAATTACAGAAGCTAAAGTGGACGGATTTAT
ATAATTTGTCAAACTTGGAATGCTTCTATTCAGACAATTTGCAGTTACCC
TCCTTCATGCAAGTGAACATATGGAAGTGCCCCAAGATGAAGTTTTTCTA
TAGAGGAGACAAACAACCGAATTCATCATTTAGAGGGATTCAAGCTTTAA
ACCTCTCAAGTGATGAATTGGCCTGCAACCAAGATATTAACTCTTTGGTA
GAAAAGGTGTTCTTGCATCAGGTAACAACTTTCCGATTCTGAATCAATTA
ATTATGACTCTTGTTTAAGTGaatttaaagaatataaaacaagaaatgtG
ATGATAAATGTATTGTAATATTTACAGGAGTTTTCTGAAGCCGTGCACAC
GGACTGTTATTCTGATTATCTTGAGTTACAATGTGACCTGGTTTCTGAAA
TTGATATGCTTAACAAATTGTTTGCCAATTTGGAAACTTTGAAGCTGCAG
AAGTGCACTGTATCATATGCAATTCCATCTTCTATTCTTGCTCTTTTAAA
GAACTTAAAAGAGTTGGAAGTACGAGATAGCGACCAAGTAGAGACAATTT
TTGATACAAGTAGAGACAACTTAAATGATGACACTGAGATTAAGGAAACA
GAATTCCACTTGAAGATATTGTCTTTAAATGGGCTATCAAAGCTGACGCA
TGTGTGGAAAAAGGACACTCACAAAATTATCATCTTTTGCAATCTACAAG
AGGTTGTTGTCAGTGATTGTGCAAAGCTGCAAACTTTATTTCCTACTTCC
TTGGAAAAAAGTCTCAAGGATCTTAAAAGGCTTAAAATAGAAAACTGTAA
AAAATTTCAAGACTTTGTTGAACAGGaggaaacaatatttgtaacAGAAA
GGTTTGTGTTCCCTTGTCTAGAGGATTTGGAACTCAAAGACTTGCCCCAG
GTAACTTGCCCTAACATGTTCACTCTGGAATTCCCCTCCCTAAAATTCTT
ATCTGTGAGGGATTGTGATGGGTTAGGGTTATTTCAAAGTGTATATGATC
CCATGGGTGAGGGTACTTCAAGCAGGACACTTCCTCTCATCTCAGACCCA
AATGTAAGTAAAGCATAATAGAATCTTTActtccaatttttttctttttt
catattttatctaATTCGCATACCTTTCAATGCTATTTGGTTTTGGCTCC
AATTATTAGGTCATTTCCAACCTGGTGAAACTGACTCTTGATTGGAAACA
AATTTTAGCATTAAGCTTATGGTTTAAGTCACAACAATCTACAGAAGGCC
TCACAAATTTAAAAAGCATTTCCTGGTGTTTCTTTCGTGCCAAGGAGAAT
GAAATGCCCATGTTGCCTGTTGAAATACTCAAGGCTCCAATTTTAGAAGA
AATGGATATAAGCAAATGTGAAAGTCTCGCGAATTTCCTTgctcaaaacc
ctaaaattggaGAGGAGGAGATGCTGGGACAGTTAACAAAATTGAAGCTA
CGCAATGTGTCCGTTACACAGTTCTCTGAGTTAGAGTACTCCTCAAGCTT
AAACATATTTAAGAGGCTCCACAAATTATTTGTTGCCCGTTGTCCCCATT
TGGCAACATTAGGAATACATTCCACTTCTACAATGTCTTTCTCTTGTCTG
AAagaagtaaatatatataaatgtccAAAGTTGAAGTATTTATTTACATC
TTCAGCTGCCAAAATGTTAATGAATCTTCAGGAGATTAGTGTCACCGGAT
GTGAATTACTAACAGAAATAGTTGTTAAAGAGGGAGATGCAACTTCTGAA
GCCATTGAATTTGAGCGACTCCACACCATTCATCTAGAATCTTTAACATG
TTTAGTATGCTTTTATTCTGGGAGTAACACTCTGCAATTATCATCTTTGA
ATTTCCCATCCTTGAAAAACGTGTGGATTAAAGAATGCTTCAGCACCAAA
ATTTTTCGTCGTCATGATAATATTCCTCCAAAATGTAGGGTTCATATAGA
TGGAAGTTTTAAAGGTGATACAAAAGTTGTGATCATGGAACAGTCTGAGG
AGGAGGCATCCTGA
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Coding sequence (CDS) from alignment at Chr_11-CM003381.1:4948115..4951428+

>LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g040000_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g040000; organism=Vigna angularis; type=CDS; length=2574bp; location=Sequence derived from: Chr_11-CM003381.1:4948115..4951428+ (Vigna angularis
ATGCTTGTCACCGACATGGAGAAGATCTTGACGAATGGGAaaggtgaaga
tgaagatgttgagaGGAACCCGGTCAGCAAGAAAATGGCCAAGATCAAGA
ACAAGTCAGCCAAGGTTATTGAGAGGTCGACTGATGCAAAGGAGAAGTCA
ACCAAGGACATTCGCAACCTTGAAGTACTAATGCTTGGCTGGAAACACAC
ATTGGAGTTAAGCACAATGTTGGAAGAATCTATGGACAACctcaaatatt
taaatgatattCACCTTGTATTTGATGTTGATGAGAACGAAAGACATGAT
ATGCCCATTCAAATACTCATGAAGATGCCCAATTTAACAACAATGAGTAT
ACAGCTTTGCAGTTCCCCCGAGGTATTTCAAACTCAAATCCCAGAAAATG
TTGAGAAAATTACACACTTGAAAACATTTATACTGCGTTATGTGTCGAAA
CTCCAGTCCATTGTGTCGGAGAACTCTTCATGGTTAAACGTGATTTGTGC
CAGGCTTCAACAATTATATGTTCTAGATTGTCCTGATTTGAAAACATTAG
TGCATTCTACGCCTTCAGTGTCTTTCAGGTATGTGAAAGAAATATACATA
GACAACTGCCAAGATATGAAGTATTTATTCCCATTGTCAGCAGTGAATAA
GTTAGAGAACCTTGAGTATATAGAAGTAAAGAACTGTAAATCAATGGAAG
CAATAGTCTTGAAAGATAAGGATGACATTTCAGAAGAGATAAAATTACAG
AAGCTAAAGTGGACGGATTTATATAATTTGTCAAACTTGGAATGCTTCTA
TTCAGACAATTTGCAGTTACCCTCCTTCATGCAAGTGAACATATGGAAGT
GCCCCAAGATGAAGTTTTTCTATAGAGGAGACAAACAACCGAATTCATCA
TTTAGAGGGATTCAAGCTTTAAACCTCTCAAGTGATGAATTGGCCTGCAA
CCAAGATATTAACTCTTTGGTAGAAAAGGTGTTCTTGCATCAGGAGTTTT
CTGAAGCCGTGCACACGGACTGTTATTCTGATTATCTTGAGTTACAATGT
GACCTGGTTTCTGAAATTGATATGCTTAACAAATTGTTTGCCAATTTGGA
AACTTTGAAGCTGCAGAAGTGCACTGTATCATATGCAATTCCATCTTCTA
TTCTTGCTCTTTTAAAGAACTTAAAAGAGTTGGAAGTACGAGATAGCGAC
CAAGTAGAGACAATTTTTGATACAAGTAGAGACAACTTAAATGATGACAC
TGAGATTAAGGAAACAGAATTCCACTTGAAGATATTGTCTTTAAATGGGC
TATCAAAGCTGACGCATGTGTGGAAAAAGGACACTCACAAAATTATCATC
TTTTGCAATCTACAAGAGGTTGTTGTCAGTGATTGTGCAAAGCTGCAAAC
TTTATTTCCTACTTCCTTGGAAAAAAGTCTCAAGGATCTTAAAAGGCTTA
AAATAGAAAACTGTAAAAAATTTCAAGACTTTGTTGAACAGGaggaaaca
atatttgtaacAGAAAGGTTTGTGTTCCCTTGTCTAGAGGATTTGGAACT
CAAAGACTTGCCCCAGGTAACTTGCCCTAACATGTTCACTCTGGAATTCC
CCTCCCTAAAATTCTTATCTGTGAGGGATTGTGATGGGTTAGGGTTATTT
CAAAGTGTATATGATCCCATGGGTGAGGGTACTTCAAGCAGGACACTTCC
TCTCATCTCAGACCCAAATGTCATTTCCAACCTGGTGAAACTGACTCTTG
ATTGGAAACAAATTTTAGCATTAAGCTTATGGTTTAAGTCACAACAATCT
ACAGAAGGCCTCACAAATTTAAAAAGCATTTCCTGGTGTTTCTTTCGTGC
CAAGGAGAATGAAATGCCCATGTTGCCTGTTGAAATACTCAAGGCTCCAA
TTTTAGAAGAAATGGATATAAGCAAATGTGAAAGTCTCGCGAATTTCCTT
gctcaaaaccctaaaattggaGAGGAGGAGATGCTGGGACAGTTAACAAA
ATTGAAGCTACGCAATGTGTCCGTTACACAGTTCTCTGAGTTAGAGTACT
CCTCAAGCTTAAACATATTTAAGAGGCTCCACAAATTATTTGTTGCCCGT
TGTCCCCATTTGGCAACATTAGGAATACATTCCACTTCTACAATGTCTTT
CTCTTGTCTGAAagaagtaaatatatataaatgtccAAAGTTGAAGTATT
TATTTACATCTTCAGCTGCCAAAATGTTAATGAATCTTCAGGAGATTAGT
GTCACCGGATGTGAATTACTAACAGAAATAGTTGTTAAAGAGGGAGATGC
AACTTCTGAAGCCATTGAATTTGAGCGACTCCACACCATTCATCTAGAAT
CTTTAACATGTTTAGTATGCTTTTATTCTGGGAGTAACACTCTGCAATTA
TCATCTTTGAATTTCCCATCCTTGAAAAACGTGTGGATTAAAGAATGCTT
CAGCACCAAAATTTTTCGTCGTCATGATAATATTCCTCCAAAATGTAGGG
TTCATATAGATGGAAGTTTTAAAGGTGATACAAAAGTTGTGATCATGGAA
CAGTCTGAGGAGGAGGCATCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf