LR48_mrnaVigan11g040300

Transcript Overview
NameLR48_mrnaVigan11g040300
Unique NameLR48_mrnaVigan11g040300_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length1686
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_11-CM003381.1supercontigChr_11-CM003381.1:5006087..5007772 -Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR319Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR325Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR341Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasR157Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0157Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1304Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR396Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0482Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0523Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR365Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR325Pisum sativum Cameor genome v1aPisum sativum
aspvR349Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR355Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR376Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR378Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR384Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR290Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR317Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR337Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR351Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR355Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR344Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR358Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR302Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR340Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR348Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR352Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR378Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR273Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR297Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR283Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR305Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Cr_03725.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_06260Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg15230.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-KK1_021244Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_14784Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr10.1175Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_16395Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.4g032520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
jg11027.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr05.647Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.4g024760.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun10g119900.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-KK1_018985Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_004492628.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Hedin2.R1.5g064520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun05g074500.4Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_004510807.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Tiffany.R1.5g054320.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Phvul.008G071700.8Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.010G092100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan03g056600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan11g040300gene-LR48_Vigan11g040300_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g040300LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1-start_codon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:5007770..5007772LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1-start_codon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:5007770..5007772Vigna angularisstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1-CDS-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:5006087..5007772LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1-CDS-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:5006087..5007772Vigna angularisCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1-exon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:5006087..5007772LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1-exon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:5006087..5007772Vigna angularisexon


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1-stop_codon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:5006087..5006089LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1-stop_codon-Chr_11-CM003381.1_Va_Jingnong6_v1.1-1589992784:5006087..5006089Vigna angularisstop_codon


Homology
BLAST of LR48_mrnaVigan11g040300 vs. DB:Swiss
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 1.576e-12
Identity = 84/322 (26.09%), Postives = 146/322 (45.34%), Query Frame = 1
Query:  469 IRELLARLQIGHLEAKHKALDRLYDVMKEDEKNVLAVLGRRNVAALVQLLTATSPRIREKTVTVICSLVESGSCEKWLVSEGVLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLLSCGILLGSKEYAAECLQNLTSSNEHLRKCVISEGGVRSLLTYLDGPLPQESAVGALRNLVGSVSEETLVSLGLLPCLVHVLKSGSL-GXXXXXXSVICRVCSSMEMKKMVGEAGCIPLLIKMLEAKTNTAREIAAQAISSLMVLSQNRR 1431
            +++L+  L+   L+ + +A   L  + K +  N + +     +  LV+LL +T    +E  VT + +L  + + +K +   G + PLI ++E+GS+ +KE +  +L  LS+  E    I   G + PL++L  +G    +  AA  L N+S   E +  + + G V  +I+L+      G  + A   L NL           I EG                      RN +G          G +P LV V++ GS  G + AAA+++    +S     MV + G +P L+ + ++ T  ARE  AQA+ S     +N+R
Sbjct:  543 VKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAA--GMVDKAVAVLANL---------ATIPEG----------------------RNAIGQE--------GGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRARE-KAQALLSYF---RNQR 819          
BLAST of LR48_mrnaVigan11g040300 vs. DB:Swiss
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.860e-10
Identity = 82/334 (24.55%), Postives = 143/334 (42.81%), Query Frame = 1
Query:  460 HNNIRELLARLQIGHLEAKHKALDRLYDVMKEDEKNVLAVLGRRNVAALVQLLT-ATSPRIREKTVTVICSLVESGSCE----KWLVSEGVLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLLS---CGILLGSKEYAAECLQNLTSSNEHLRKCVISEGGVRSLLTYLDGPLPQESAVGALRNLVGSVSEETLVSLGLLPCLVHVLKSGSLGXXXXXXSVICRVCSSMEMKKMVGEA-GCIPLLIKMLEAKTNTAREIAAQAISSLMVLSQNRRE 1434
            HN I ELL +L     E +  A   +  + K++  N +A+     +  LV LLT +   R +E  VT I +L     C+    K + S G +P ++ +++ GS  ++E A  +L  LS+  E    I   G + PL+ L   G    +  AA  L N+      +      G+V V++ LL+    G++                 +E L    I       L ++ DG    +S VGA                  +P LV  ++SGS   ++ +A+V+  +CS  +   +  +  G + LLI+M E  T+  +  AAQ ++     +  +++
Sbjct:  354 HNKIEELLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNL---SICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMV-----------------DESLSILAI-------LSSHPDG----KSEVGA---------------ADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLLNRFSRFNDQQKQ 641          
BLAST of LR48_mrnaVigan11g040300 vs. DB:Swiss
Match: VAC8_KLULA (Vacuolar protein 8 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=VAC8 PE=3 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 6.969e-10
Identity = 75/287 (26.13%), Postives = 137/287 (47.74%), Query Frame = 1
Query:  604 LVQLLTATSPRIREKTVTVICSLVESGSCEKWLVSEGVLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLLSCGILLGSKEYAAECLQNLTSSNEHLRKCVISEGG--VRSLLTYLDGPLPQE--SAVGALRNLVGSVSEE-TLVSLGLLPCLVHVLKSGSLGXXXXXXSVICRVCSSMEMKKMVGEAGCIPLLIKMLEAKTNTAREIAAQAISSLMVLS----QNRREV 1437
            ++ LLT   P+IR  +   + +L  +   +  +V  G L PLI  ++S +   +  A+  +  L+   +    I   G + PL +L  S +   Q  A   L N++   E R+ L + G V V+++LLS  +    + Y    L N+ + +E  R+ +       V  L++ ++   P+    A  ALRNL    + +  +V  G LP LV +++S SL    A+ + I  +      + ++ +AG +P L+K+L+ +   + EI   A+S+L  L+    +NR E 
Sbjct:   92 ILMLLTNPDPQIRIASCAALGNLAVNNENKLLIVEMGGLEPLIEQMKSDNVEVQCNAVGCITNLATQDDNKIEIAQSGALVPLTKLARSSNIRVQRNATGALLNMTHSGENRKELVDAGAVPVLVSLLS-SMDADVQYYCTTALSNI-AVDESNRRYLSKHAPKLVTKLVSLMNSTSPRVKCQATLALRNLASDTNYQLEIVRAGGLPDLVQLIQSDSLPLVLASVACIRNISIHPLNEGLIVDAGFLPPLVKLLDYQ--ESEEIQCHAVSTLRNLAASSEKNRAEF 374          
BLAST of LR48_mrnaVigan11g040300 vs. DB:Swiss
Match: VAC8_CANGA (Vacuolar protein 8 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=VAC8 PE=3 SV=3)

HSP 1 Score: 64.6994 bits (156), Expect = 1.149e-9
Identity = 73/283 (25.80%), Postives = 131/283 (46.29%), Query Frame = 1
Query:  613 LLTATSPRIREKTVTVICSLVESGSCEKWLVSEGVLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLLSCGILLGSKEYAAECLQNLTSSNEHLRKCVISEGG-VRSLLTYLDGPLPQE--SAVGALRNLVGSVSEE-TLVSLGLLPCLVHVLKSGSLGXXXXXXSVICRVCSSMEMKKMVGEAGCIPLLIKMLEAKTNTAREIAAQAISSLMVLS----QNRREV 1437
            LL +  P+I+      + +L  +   +  +V  G L PLI  +   +   +  A+  +  L+   +    I   G + PL +L +S     Q  A   L N++   E R+ L   G V V+++LLS       + Y    L N+     + +K   +E   V  L++ +D P  +    A  ALRNL    S +  +V  G LP LV++++S S+    A+ + I  +      + ++ +AG +P L+K+L+ +   + EI   A+S+L  L+    +NR+E 
Sbjct:   93 LLQSQDPQIQVAACAALGNLAVNNENKLLIVDMGGLEPLINQMMGTNVEVQCNAVGCITNLATRDDNKHKIATSGALVPLTKLAKSKHIRVQRNATGALLNMTHSEENRRELVNAGAVPVLVSLLSSND-PDVQYYCTTALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVNLIQSESVPLILASVACIRNISIHPLNEGLIVDAGFLPPLVKLLDYR--DSEEIQCHAVSTLRNLAASSEKNRKEF 372          
BLAST of LR48_mrnaVigan11g040300 vs. DB:Swiss
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.344e-8
Identity = 48/182 (26.37%), Postives = 86/182 (47.25%), Query Frame = 1
Query:  445 SDIATHNNIRELLARLQIGHLEAKHKALDRLYDVMKEDEKNVLAVLGRRNVAALVQLLTATSPRIREKTVTVICSLVESGSCEKWLVSEGVLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLLS 990
            S  A  N I +L+ RL  G+ E +  A   +  + K +  N +A+     +  LV LL+    RI+E +VT + +L    + +  +VS G +P ++++++ GS  ++E A  +L  LS+  E    I   G + PL+ L   G    +  AA  L N+      +      G++  +  LL+
Sbjct:  346 SSPAEANKIEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLT 527          
BLAST of LR48_mrnaVigan11g040300 vs. DB:Swiss
Match: VAC8_YEAST (Vacuolar protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VAC8 PE=1 SV=3)

HSP 1 Score: 60.8474 bits (146), Expect = 1.944e-8
Identity = 72/283 (25.44%), Postives = 129/283 (45.58%), Query Frame = 1
Query:  613 LLTATSPRIREKTVTVICSLVESGSCEKWLVSEGVLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLLSCGILLGSKEYAAECLQNLTSSNEHLRKCVISEGG-VRSLLTYLDGPLPQE--SAVGALRNLVGSVSEE-TLVSLGLLPCLVHVLKSGSLGXXXXXXSVICRVCSSMEMKKMVGEAGCIPLLIKMLEAKTNTAREIAAQAISSLMVLS----QNRREV 1437
            LL +  P+I+      + +L  +   +  +V  G L PLI  +   +   +  A+  +  L+   +    I   G + PL +L +S     Q  A   L N++   E R+ L   G V V+++LLS       + Y    L N+     + +K   +E   V  L++ +D P  +    A  ALRNL    S +  +V  G LP LV +++S S+    A+ + I  +      + ++ +AG +  L+++L+ K   + EI   A+S+L  L+    +NR+E 
Sbjct:   93 LLQSQDPQIQVAACAALGNLAVNNENKLLIVEMGGLEPLINQMMGDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAKSKHIRVQRNATGALLNMTHSEENRKELVNAGAVPVLVSLLS-STDPDVQYYCTTALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLIQSDSIPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVRLLDYK--DSEEIQCHAVSTLRNLAASSEKNRKEF 372          

HSP 2 Score: 57.3806 bits (137), Expect = 2.208e-7
Identity = 86/342 (25.15%), Postives = 157/342 (45.91%), Query Frame = 1
Query:  502 HLEAKHKALDRLYDVMKEDEKNVLAVLGRRNVAALVQLLTATSPRIREKTVTVICSL-VESGSCEKWLVSEG-VLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVS--QAAAACTLTNISAVPEVRQALAEEGIVSVMINLLSCGILLGSKEYAAECLQNLTSSNEHLRKCVISEGGVRSLLTY-LDGPLPQESAVGALRNL--VGSVSEETLVSLGLLPCLVHVLKSGSLGXXXXXXSVICRVCSSMEMKKMVGEAGCIP------LLIKMLEAKTNTAREIAAQAISSLMVLSQNRRE--VKKDDKSVPNLVQLLD 1482
            H+  +  A   L + M   E+N   ++    V  LV LL++T P ++    T + ++ V+  + +K   +E  ++  L+ L++S S+  K +A ++L+ L+        IV  GG+  L++L +S DS+    A+ AC + NIS  P     + + G +  ++ LL        + +A   L+NL +S+E  RK     G V       LD P+  +S + A   +  +  VS+  L+   +L  L+ +  S +      AA+ +  +CS +     + EA   P       LI+ L++   T   IA   I  L+    ++ E  VK DD  +  + ++ D
Sbjct:  180 HIRVQRNATGALLN-MTHSEENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNIAVDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLIQS-DSIPLVLASVAC-IRNISIHPLNEGLIVDAGFLKPLVRLLDYKDSEEIQCHAVSTLRNLAASSEKNRKEFFESGAVEKCKELALDSPVSVQSEISACFAILALADVSKLDLLEANILDALIPMTFSQNQEVSGNAAAALANLCSRVNNYTKIIEAWDRPNEGIRGFLIRFLKSDYATFEHIALWTILQLLESHNDKVEDLVKNDDDIINGVRKMAD 518          
BLAST of LR48_mrnaVigan11g040300 vs. DB:Swiss
Match: PUB40_ARATH (U-box domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=PUB40 PE=2 SV=2)

HSP 1 Score: 60.4622 bits (145), Expect = 2.523e-8
Identity = 44/177 (24.86%), Postives = 92/177 (51.98%), Query Frame = 1
Query:  478 LLARLQIGHLEAKHKALDRLYDVMKEDEKNVLAVLGRRNVAALVQLLTATSPRIREKTVTVICSLVESGSCEKWLVSEGVLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLLSCGILLG 1008
            LL +L+   +    +AL  +  + + DE + +++   R ++AL  L+ +    ++     V+ +L    S +  +V  G++PPLI +++ GS  ++E +   +  L++  E   AI   GG+ PL+ L   G  +++  +A  L ++S V   R  L + G V +++ ++S G ++G
Sbjct:  233 LLTKLKSNRISEIEEALISIRRITRIDESSRISLCTTRVISALKSLIVSRYATVQVNVTAVLVNLSLEKSNKVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFSLALEDENKTAIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSLGQMIG 409          
BLAST of LR48_mrnaVigan11g040300 vs. DB:Swiss
Match: PUB12_ORYSJ (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 7.207e-8
Identity = 62/244 (25.41%), Postives = 117/244 (47.95%), Query Frame = 1
Query:  712 GVLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLLSCGILLGSKEYAAECLQNLTSSNEHLRKCVISEGGVRSLLTYLDGPLPQ--ESAVGALRNLVGSVSEETLVSLG-LLPCLVHVLKSGSLGXXXXXXSVICRVCSSMEMKKMVGEAGCIPLLIKMLEAKTNTAREIAAQAISSLMVLSQNRRE 1434
            G +P L+ L+ S    ++E A+ +L  LS+      +IV    +  ++E+ ++G   ++  AA TL ++S V E +  +   G +  +INLL  G   G K+ A             +R   +  G V  L+ +L  P     + A+  L  L G+   + +++    +P LV V+K+GS   ++ AA+++  +CS+   + +  +A  +   +K L ++T T R  A +  SS++ L     E
Sbjct:  365 GAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVR--AVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKEL-SETGTDR--AKRKASSILELMHQANE 603          

HSP 2 Score: 57.7658 bits (138), Expect = 2.110e-7
Identity = 45/183 (24.59%), Postives = 86/183 (46.99%), Query Frame = 1
Query:  439 AESDIATHNNIRELLARLQIGHLEAKHKALDRLYDVMKEDEKNVLAVLGRRNVAALVQLLTATSPRIREKTVTVICSLVESGSCEKWLVSEGVLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLL 987
            A+S    H  +  L+ RL+ G+ + +  A   +  + K +  N + +     +  LV LL+++ PR +E  VT + +L    + +  +V    +P ++ ++++GS  ++E A  +L  LS+  E    I   G + PLI L   G    +  AA  + N+      +    + GIV  ++N L
Sbjct:  315 AKSSDYDHAGLVSLMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFL 497          
BLAST of LR48_mrnaVigan11g040300 vs. DB:Swiss
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUB2 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.943e-7
Identity = 57/228 (25.00%), Postives = 100/228 (43.86%), Query Frame = 1
Query:  718 LPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGD-SVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLLSCGILLGSKEYAAECLQNLTSSNEHLRKCVISEGGVRSLLTYLDGPLPQESAVGALRNLVGSVSEETLVSLGLLPCLVHVLKSGSLGXXXXXXSVICRVCSSMEMKKMVGEAGCIPLLIKMLEAKTNTAREIAAQAI 1398
            +P L+ L+ S     +  A+  L  LS++      I   G + PLI + ++G    ++A +A TL ++S + E +  + E G +  +++LL  G L G K+ AA  L NL+  +E+  K VI  G VR L+  +D                                        + G  + A  V+  + +  E K  +GE G IP+L++++E  +   +E A  A+
Sbjct:  465 IPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKD-AATALFNLSIHHENKTK-VIEAGAVRYLVELMDP---------------------------------------AFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAAL 651          

HSP 2 Score: 55.8398 bits (133), Expect = 7.798e-7
Identity = 67/274 (24.45%), Postives = 118/274 (43.07%), Query Frame = 1
Query:  412 LPLTVLGSMAESDIATHNNIRELLARLQIGHLEAKHKALDRLYDVMKEDEKNVLAVLGRRNVAALVQLLTATSPRIREKTVTVICSL----------VESGSC-----------------------------EKW---LVSEGVLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLLSCGILLGSKEYAAECLQNLTSSNEHLRKCVISEGGVRSLL 1107
            +P TV  + + S I T   +++L+  L+   L+ + +A  R+  + +    N + +     + +LV LL +T  RI+   VT + +L           ESG+                              E++   +   G + PL+ L+ SGS   K+ A  +L  LS+  E    ++  G VR L+EL +    + +  A   L N++ V E + A+ EEG + V++ ++  G   G KE A   L  L + +      VI EG +  L+
Sbjct:  406 IPATVRETGSSSSIETE--VKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVE-KAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARG-KENATAALLQLCTHSPKFCNNVIREGVIPPLV 675          
BLAST of LR48_mrnaVigan11g040300 vs. DB:Swiss
Match: VAC8_ASHGO (Vacuolar protein 8 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=VAC8 PE=3 SV=3)

HSP 1 Score: 56.9954 bits (136), Expect = 3.172e-7
Identity = 73/283 (25.80%), Postives = 128/283 (45.23%), Query Frame = 1
Query:  613 LLTATSPRIREKTVTVICSLVESGSCEKWLVSEGVLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVSQAAAACTLTNISAVPEVRQALAEEGIVSVMINLLSCGILLGSKEYAAECLQNLTSSNEHLRKCVISEGGVRSLLTYL-DGPLPQE--SAVGALRNLVGSVSEE-TLVSLGLLPCLVHVLKSGSLGXXXXXXSVICRVCSSMEMKKMVGEAGCIPLLIKMLEAKTNTAREIAAQAISSLMVLS----QNRREV 1437
            LL +  P+I+      + +L  +   +  +V  G L PLI  ++S +   +  A+  +  L+   +    I   G + PL +L +S +   Q  A   L N++   E R+ L + G V V+++LLS       + Y    L N+     + RK   +E  + S L  L D P  +    A  ALRNL      +  +V  G L  LV +++  S+    A+ + I  +      + ++ +AG +  L+K+L+   N   EI   A+S+L  L+    +NR+E 
Sbjct:   93 LLQSHDPQIQIAACAALGNLAVNNENKILIVEMGGLEPLIEQMKSNNVEVQCNAVGCITNLATQDDNKAKIAHSGALVPLTKLAKSKNIRVQRNATGALLNMTHSGENRKELVDAGAVPVLVSLLSSSD-ADVQYYCTTALSNIAVDESNRRKLSQTEPRLVSKLVVLTDSPSARVKCQATLALRNLASDTGYQLEIVRAGGLSHLVKLIQCNSMPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVKLLDYNDN--EEIQCHAVSTLRNLAASSEKNRQEF 372          
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan11g040300 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
PUB4_ARATH1.576e-1226.09U-box domain-containing protein 4 OS=Arabidopsis t... [more]
PUB12_ARATH1.860e-1024.55U-box domain-containing protein 12 OS=Arabidopsis ... [more]
VAC8_KLULA6.969e-1026.13Vacuolar protein 8 OS=Kluyveromyces lactis (strain... [more]
VAC8_CANGA1.149e-925.80Vacuolar protein 8 OS=Candida glabrata (strain ATC... [more]
PUB13_ARATH1.344e-826.37U-box domain-containing protein 13 OS=Arabidopsis ... [more]
VAC8_YEAST1.944e-825.44Vacuolar protein 8 OS=Saccharomyces cerevisiae (st... [more]
PUB40_ARATH2.523e-824.86U-box domain-containing protein 40 OS=Arabidopsis ... [more]
PUB12_ORYSJ7.207e-825.41U-box domain-containing protein 12 OS=Oryza sativa... [more]
PUB2_ARATH1.943e-725.00U-box domain-containing protein 2 OS=Arabidopsis t... [more]
VAC8_ASHGO3.172e-725.80Vacuolar protein 8 OS=Ashbya gossypii (strain ATCC... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 268..308
e-value: 0.015
score: 24.5
coord: 186..226
e-value: 27.0
score: 9.9
coord: 309..350
e-value: 14.0
score: 12.2
coord: 391..430
e-value: 42.0
score: 8.4
coord: 352..390
e-value: 4.7
score: 15.8
coord: 431..471
e-value: 0.6
score: 19.2
coord: 472..514
e-value: 75.0
score: 6.5
IPR000225ArmadilloPFAMPF00514Armcoord: 270..308
e-value: 5.4E-7
score: 29.3
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 238..280
score: 8.837
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 154..551
e-value: 3.2E-60
score: 205.9
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 157..538

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g040300; organism=Vigna angularis; type=mRNA; length=1686bp
ATGGTGGAAGATAATAAAGCTGCAGTAGCAGTTGATGATGCCTGTTCAAG
AGAAAACTTGTTGTTGCATGCACAGGAACTTGTTCCTGTGGCTCTTGCTA
AGGCGAAAGAGGTTAAGGTGTTCCCTGGTAGGTGGAAGATGATCATTTCA
AAATTGGAGCAGATTCCCTCCTGTTTATCGGATTTGTCTAGCCACCCTTG
TTTCTCCAAGAATGCTCTATGCAAGGAGCAATTGCAGGCTGTGTCAAAGA
CGCTTAAAGAAACCAAAGAATTGGCTGAGTTGTGTGTGATGGAGAAGTAC
GAGGGTAAGCTTAGGATGCAGAGTGATCTTGATGCATTAACTGGGAAACT
GGATTTGAATTTAAAGGATTGTGGTCTCTTGATCAAGACCGGTGTGCTCG
GTGAAGCTACTTTGCCATTAACCGTGTTAGGTTCTATGGCAGAATCAGAT
ATTGCAACACACAACAATATAAGAGAACTACTAGCGCGCCTTCAGATTGG
TCACTTGGAAGCAAAGCACAAAGCCTTAGACAGACTCTATGATGTTATGA
AAGAGGATGAAAAGAATGTTTTGGCTGTTCTTGGCAGGAGGAATGTTGCT
GCTTTGGTTCAATTGCTCACAGCAACATCTCCAAGGATAAGGGAGAAGAC
GGTTACTGTTATATGCTCTCTGGTGGAATCTGGGAGCTGTGAAAAGTGGC
TAGTTTCTGAAGGAGTTCTTCCACCTCTTATTAGACTTGTTGAATCTGGT
AGTGCTGTCAGTAAAGAGAAGGCTATAGTATCTCTTCAGAGACTGTCAAT
GTCAGCAGAAACAACTCGTGCAATTGTTGGACACGGTGGTGTTCGGCCAT
TGATCGAGCTTTGTGAGAGTGGAGATTCTGTGTCACAGGCTGCTGCTGCC
TGCACTTTGACAAACATATCAGCTGTTCCTGAGGTGAGACAGGCTTTGGC
TGAAGAAGGTATTGTAAGTGTTATGATCAATCTTCTTAGTTGTGGAATTT
TGTTAGGTTCCAAAGAGTATGCAGCTGAGTGCTTGCAGAATCTCACTTCA
AGCAACGAGCATTTGAGAAAGTGTGTTATATCAGAAGGTGGTGTTAGAAG
TCTTCTGACCTATCTAGATGGTCCACTTCCTCAAGAATCCGCAGTTGGAG
CATTGAGGAATCTGGTTGGATCAGTTTCTGAGGAAACTTTGGTTTCTCTT
GGTTTGCTTCCTTGTTTGGTTCACGTTCTGAAGTCTGGATCTTTGGGTGC
TCAACAAGCTGCAGCTTCTGTCATTTGCCGAGTTTGCAGCTCAATGGAGA
TGAAGAAAATGGTGGGTGAAGCTGGGTGCATCCCTCTTCTTATAAAGATG
CTTGAGGCTAAAACAAATACTGCTAGAGAGATTGCTGCTCAAGCAATTTC
AAGCCTCATGGTTCTGTCTCAAAATCGGAGAGAGGTTAAGAAAGATGATA
AAAGTGTTCCAAATCTTGTCCAGTTGCTTGATCCAAGCTCTCAGAACACT
GCCAAAAAGTATGCAGTTTCATGCCTTGGATCACTTTCTCCATGTAAGAA
GTGTAAGAAACTGATGATTTCGTATGGAGCAATCGGGTATCTGAAGAAGC
TTACAGAGATGGACATTCCAGGAGCTAAAAAGCTTCTTGAGAGGTTGGAA
AGAGGGAAATTGAGAAGCTTGTTCAGCAGAAAGTAG
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protein sequence of LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1

>LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=561bp
MVEDNKAAVAVDDACSRENLLLHAQELVPVALAKAKEVKVFPGRWKMIIS
KLEQIPSCLSDLSSHPCFSKNALCKEQLQAVSKTLKETKELAELCVMEKY
EGKLRMQSDLDALTGKLDLNLKDCGLLIKTGVLGEATLPLTVLGSMAESD
IATHNNIRELLARLQIGHLEAKHKALDRLYDVMKEDEKNVLAVLGRRNVA
ALVQLLTATSPRIREKTVTVICSLVESGSCEKWLVSEGVLPPLIRLVESG
SAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCESGDSVSQAAAA
CTLTNISAVPEVRQALAEEGIVSVMINLLSCGILLGSKEYAAECLQNLTS
SNEHLRKCVISEGGVRSLLTYLDGPLPQESAVGALRNLVGSVSEETLVSL
GLLPCLVHVLKSGSLGAQQAAASVICRVCSSMEMKKMVGEAGCIPLLIKM
LEAKTNTAREIAAQAISSLMVLSQNRREVKKDDKSVPNLVQLLDPSSQNT
AKKYAVSCLGSLSPCKKCKKLMISYGAIGYLKKLTEMDIPGAKKLLERLE
RGKLRSLFSRK
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mRNA from alignment at Chr_11-CM003381.1:5006087..5007772-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g040300; organism=Vigna angularis; type=mRNA; length=1686bp; location=Sequence derived from: Chr_11-CM003381.1:5006087..5007772- (Vigna angularis
ATGGTGGAAGATAATAAAGCTGCAGTAGCAGTTGATGATGCCTGTTCAAG AGAAAACTTGTTGTTGCATGCACAGGAACTTGTTCCTGTGGCTCTTGCTA AGGCGAAAGAGGTTAAGGTGTTCCCTGGTAGGTGGAAGATGATCATTTCA AAATTGGAGCAGATTCCCTCCTGTTTATCGGATTTGTCTAGCCACCCTTG TTTCTCCAAGAATGCTCTATGCAAGGAGCAATTGCAGGCTGTGTCAAAGA CGCTTAAAGAAACCAAAGAATTGGCTGAGTTGTGTGTGATGGAGAAGTAC GAGGGTAAGCTTAGGATGCAGAGTGATCTTGATGCATTAACTGGGAAACT GGATTTGAATTTAAAGGATTGTGGTCTCTTGATCAAGACCGGTGTGCTCG GTGAAGCTACTTTGCCATTAACCGTGTTAGGTTCTATGGCAGAATCAGAT ATTGCAACACACAACAATATAAGAGAACTACTAGCGCGCCTTCAGATTGG TCACTTGGAAGCAAAGCACAAAGCCTTAGACAGACTCTATGATGTTATGA AAGAGGATGAAAAGAATGTTTTGGCTGTTCTTGGCAGGAGGAATGTTGCT GCTTTGGTTCAATTGCTCACAGCAACATCTCCAAGGATAAGGGAGAAGAC GGTTACTGTTATATGCTCTCTGGTGGAATCTGGGAGCTGTGAAAAGTGGC TAGTTTCTGAAGGAGTTCTTCCACCTCTTATTAGACTTGTTGAATCTGGT AGTGCTGTCAGTAAAGAGAAGGCTATAGTATCTCTTCAGAGACTGTCAAT GTCAGCAGAAACAACTCGTGCAATTGTTGGACACGGTGGTGTTCGGCCAT TGATCGAGCTTTGTGAGAGTGGAGATTCTGTGTCACAGGCTGCTGCTGCC TGCACTTTGACAAACATATCAGCTGTTCCTGAGGTGAGACAGGCTTTGGC TGAAGAAGGTATTGTAAGTGTTATGATCAATCTTCTTAGTTGTGGAATTT TGTTAGGTTCCAAAGAGTATGCAGCTGAGTGCTTGCAGAATCTCACTTCA AGCAACGAGCATTTGAGAAAGTGTGTTATATCAGAAGGTGGTGTTAGAAG TCTTCTGACCTATCTAGATGGTCCACTTCCTCAAGAATCCGCAGTTGGAG CATTGAGGAATCTGGTTGGATCAGTTTCTGAGGAAACTTTGGTTTCTCTT GGTTTGCTTCCTTGTTTGGTTCACGTTCTGAAGTCTGGATCTTTGGGTGC TCAACAAGCTGCAGCTTCTGTCATTTGCCGAGTTTGCAGCTCAATGGAGA TGAAGAAAATGGTGGGTGAAGCTGGGTGCATCCCTCTTCTTATAAAGATG CTTGAGGCTAAAACAAATACTGCTAGAGAGATTGCTGCTCAAGCAATTTC AAGCCTCATGGTTCTGTCTCAAAATCGGAGAGAGGTTAAGAAAGATGATA AAAGTGTTCCAAATCTTGTCCAGTTGCTTGATCCAAGCTCTCAGAACACT GCCAAAAAGTATGCAGTTTCATGCCTTGGATCACTTTCTCCATGTAAGAA GTGTAAGAAACTGATGATTTCGTATGGAGCAATCGGGTATCTGAAGAAGC TTACAGAGATGGACATTCCAGGAGCTAAAAAGCTTCTTGAGAGGTTGGAA AGAGGGAAATTGAGAAGCTTGTTCAGCAGAAAGTAG
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Coding sequence (CDS) from alignment at Chr_11-CM003381.1:5006087..5007772-

>LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan11g040300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan11g040300; organism=Vigna angularis; type=CDS; length=1686bp; location=Sequence derived from: Chr_11-CM003381.1:5006087..5007772- (Vigna angularis
ATGGTGGAAGATAATAAAGCTGCAGTAGCAGTTGATGATGCCTGTTCAAG
AGAAAACTTGTTGTTGCATGCACAGGAACTTGTTCCTGTGGCTCTTGCTA
AGGCGAAAGAGGTTAAGGTGTTCCCTGGTAGGTGGAAGATGATCATTTCA
AAATTGGAGCAGATTCCCTCCTGTTTATCGGATTTGTCTAGCCACCCTTG
TTTCTCCAAGAATGCTCTATGCAAGGAGCAATTGCAGGCTGTGTCAAAGA
CGCTTAAAGAAACCAAAGAATTGGCTGAGTTGTGTGTGATGGAGAAGTAC
GAGGGTAAGCTTAGGATGCAGAGTGATCTTGATGCATTAACTGGGAAACT
GGATTTGAATTTAAAGGATTGTGGTCTCTTGATCAAGACCGGTGTGCTCG
GTGAAGCTACTTTGCCATTAACCGTGTTAGGTTCTATGGCAGAATCAGAT
ATTGCAACACACAACAATATAAGAGAACTACTAGCGCGCCTTCAGATTGG
TCACTTGGAAGCAAAGCACAAAGCCTTAGACAGACTCTATGATGTTATGA
AAGAGGATGAAAAGAATGTTTTGGCTGTTCTTGGCAGGAGGAATGTTGCT
GCTTTGGTTCAATTGCTCACAGCAACATCTCCAAGGATAAGGGAGAAGAC
GGTTACTGTTATATGCTCTCTGGTGGAATCTGGGAGCTGTGAAAAGTGGC
TAGTTTCTGAAGGAGTTCTTCCACCTCTTATTAGACTTGTTGAATCTGGT
AGTGCTGTCAGTAAAGAGAAGGCTATAGTATCTCTTCAGAGACTGTCAAT
GTCAGCAGAAACAACTCGTGCAATTGTTGGACACGGTGGTGTTCGGCCAT
TGATCGAGCTTTGTGAGAGTGGAGATTCTGTGTCACAGGCTGCTGCTGCC
TGCACTTTGACAAACATATCAGCTGTTCCTGAGGTGAGACAGGCTTTGGC
TGAAGAAGGTATTGTAAGTGTTATGATCAATCTTCTTAGTTGTGGAATTT
TGTTAGGTTCCAAAGAGTATGCAGCTGAGTGCTTGCAGAATCTCACTTCA
AGCAACGAGCATTTGAGAAAGTGTGTTATATCAGAAGGTGGTGTTAGAAG
TCTTCTGACCTATCTAGATGGTCCACTTCCTCAAGAATCCGCAGTTGGAG
CATTGAGGAATCTGGTTGGATCAGTTTCTGAGGAAACTTTGGTTTCTCTT
GGTTTGCTTCCTTGTTTGGTTCACGTTCTGAAGTCTGGATCTTTGGGTGC
TCAACAAGCTGCAGCTTCTGTCATTTGCCGAGTTTGCAGCTCAATGGAGA
TGAAGAAAATGGTGGGTGAAGCTGGGTGCATCCCTCTTCTTATAAAGATG
CTTGAGGCTAAAACAAATACTGCTAGAGAGATTGCTGCTCAAGCAATTTC
AAGCCTCATGGTTCTGTCTCAAAATCGGAGAGAGGTTAAGAAAGATGATA
AAAGTGTTCCAAATCTTGTCCAGTTGCTTGATCCAAGCTCTCAGAACACT
GCCAAAAAGTATGCAGTTTCATGCCTTGGATCACTTTCTCCATGTAAGAA
GTGTAAGAAACTGATGATTTCGTATGGAGCAATCGGGTATCTGAAGAAGC
TTACAGAGATGGACATTCCAGGAGCTAAAAAGCTTCTTGAGAGGTTGGAA
AGAGGGAAATTGAGAAGCTTGTTCAGCAGAAAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding