LR48_mrnaVigan10g089300

Transcript Overview
NameLR48_mrnaVigan10g089300
Unique NameLR48_mrnaVigan10g089300_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length4347
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_10-CM003380.1supercontigChr_10-CM003380.1:11057149..11061495 -Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR261Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR277Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR297Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL099Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0686Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0745Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0920Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1230Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR352Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0429Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0434Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0452Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR290Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR325Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR327Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR296Pisum sativum Cameor genome v1aPisum sativum
aspvR315Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR320Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR262Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR265Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR292Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR305Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR302Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR195Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR198Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR252Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR331Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR334Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR241Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR250Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR237Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR248Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.3g071840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_012714554.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.007G179300.2Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-XM_014659177.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Ca_09280.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun07g146200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.model.Chr07.1352Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_03679Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.3g087480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
jg3253.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-KK1_007003Cajanus cajan Asha genome v1.0Cajanus cajan
Cr_09178.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan10g089300gene-LR48_Vigan10g089300_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g089300LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-start_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11061493..11061495LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-start_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11061493..11061495Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11061436..11061495LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11061436..11061495Vigna angularisexon
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11061193..11061243LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11061193..11061243Vigna angularisexon
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11060669..11060747LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11060669..11060747Vigna angularisexon
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11060381..11060499LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11060381..11060499Vigna angularisexon
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11060226..11060299LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11060226..11060299Vigna angularisexon
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11059727..11059847LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11059727..11059847Vigna angularisexon
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11059574..11059642LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11059574..11059642Vigna angularisexon
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11059342..11059383LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11059342..11059383Vigna angularisexon
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11058352..11058429LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11058352..11058429Vigna angularisexon
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057803..11057861LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057803..11057861Vigna angularisexon
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057556..11057640LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057556..11057640Vigna angularisexon
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057337..11057425LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057337..11057425Vigna angularisexon
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057149..11057230LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057149..11057230Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11061244..11061435LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11061244..11061435Vigna angularisintron
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11060748..11061192LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11060748..11061192Vigna angularisintron
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11060500..11060668LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11060500..11060668Vigna angularisintron
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11060300..11060380LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11060300..11060380Vigna angularisintron
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11059848..11060225LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11059848..11060225Vigna angularisintron
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11059643..11059726LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11059643..11059726Vigna angularisintron
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11059384..11059573LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11059384..11059573Vigna angularisintron
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11058430..11059341LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11058430..11059341Vigna angularisintron
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057862..11058351LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057862..11058351Vigna angularisintron
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057641..11057802LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057641..11057802Vigna angularisintron
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057426..11057555LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057426..11057555Vigna angularisintron
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057231..11057336LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057231..11057336Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS15754CDS15754_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-stop_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057149..11057151LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1-stop_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11057149..11057151Vigna angularisstop_codon


Homology
[Close]
BLAST of LR48_mrnaVigan10g089300 vs. DB:Swiss
Match: CCH11_ARATH (Cyclin-H1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCH1-1 PE=1 SV=1)

HSP 1 Score: 403.675 bits (1036), Expect = 2.892e-140
Identity = 219/333 (65.77%), Postives = 261/333 (78.38%), Query Frame = 1 
Query:    1 MADFMTSTHRVKWIFTPQQLVEKYKAANQRAKHILEKYGATLMEVDVDGSLSYPEPQMTAKDSGEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEEFCNGGDDQLQMLKTLQDTARLEVDKMMLTDATLLFPPGQXXXXXXXXXXXXXXVIDFDSYLESIFQGQNSMHTMAELAESLHAIDSCVKKYKIPSEKELKHINRKLKSCWGH-SSHDEGXXXXXXXXXXXXXXXNEAQNMA 996
            MADF TST R KWIFTPQ+L E+YKAANQRA  +LEK G T +EVD  GSL+YP+ ++ + D  +K  + KPLS +EE+ +R FYE K+QEVC+ F FPHKIQATAL YFKRFYLQWSVM+H PK IMLTC+YAACKIEENHVSAEE+GKGI+QDH++IL  EM V QSLEFDLIVYAPYR++EGF+ +MEEF    DD++Q L++L   A  E DK+MLTDA LLFPPGQLALA+L  +N +  VIDFD YLE+I    NS HT +EL + L  I+  VK YK PSEK++KHINRKLKSC GH SSHDE KKREK+SKHKS RSSN+  N A
Sbjct:    1 MADFQTSTQRAKWIFTPQKLAERYKAANQRAVQMLEKCGTTQVEVDASGSLTYPKDKVGSGDQADK--KLKPLSADEERFMRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVMQHHPKEIMLTCVYAACKIEENHVSAEEIGKGINQDHRIILKYEMAVLQSLEFDLIVYAPYRAIEGFVNNMEEFLQARDDEIQKLESLLKGATAEADKVMLTDAPLLFPPGQLALASLRIANGVLGVIDFDRYLENIVSQPNSEHTTSELTKLLDNIEYLVKNYKCPSEKDMKHINRKLKSCLGHSSSHDESKKREKRSKHKSHRSSNDTPNGA 331
[Close]
BLAST of LR48_mrnaVigan10g089300 vs. DB:Swiss
Match: CCH11_ORYSJ (Cyclin-H1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCH1-1 PE=1 SV=1)

HSP 1 Score: 375.555 bits (963), Expect = 2.789e-129
Identity = 209/330 (63.33%), Postives = 260/330 (78.79%), Query Frame = 1 
Query:    1 MADFMTSTHRVKWIFTPQQLVEKYKAANQRAKHILEKYGATLMEVD-VDGSLSYPEPQMTAKDSGEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEEFCNGGDDQLQMLKTLQDTARLEVDKMMLTDATLLFPPGQXXXXXXXXXXXXXXVIDFDSYLESIFQGQNSMHTMAELAESLHAIDSCVKKYKIPSEKELKHINRKLKSCWGHSSHDEGXXXXXXXXXXXXXXXNEAQ 987
            MADF TSTHR +WIF    L++++ AANQRA   L +YG T ++VD VDGSLSYPEP   A D     S  KPLS EEE+ +RVFYE K+QEVC+ F+FPHKIQATA+IYFKRFYLQWSVMEH PKHIMLTCIY++CK+EENHVSAEELGKGI QDHQ+IL NEMIV +SL+FDLIVYAPYRS+EGF+ DME+FC  G+ + Q L+ L+ TA  +VDKMMLTDA LL+ PGQLALAAL  SN +H +++F+ YLES+F  Q+S   + +   S++ I+  V++ KIP+ K+++HI+RKLK C   SS DE KK+EKKSKHKSKR++NEAQ
Sbjct:    1 MADFRTSTHRERWIFQTNDLMDRWGAANQRATETLVQYGTTRLKVDPVDGSLSYPEP---APDHVVGSSGVKPLSCEEERLMRVFYEQKIQEVCSAFKFPHKIQATAIIYFKRFYLQWSVMEHHPKHIMLTCIYSSCKVEENHVSAEELGKGIQQDHQIILNNEMIVLKSLDFDLIVYAPYRSIEGFVDDMEDFCRAGNGEHQRLQDLRQTAISQVDKMMLTDAPLLYTPGQLALAALHKSNDMHKILNFERYLESVFSRQHSDCPIEQFVGSINMINYLVEQLKIPTPKDMRHIDRKLKHCLDPSSQDEHKKKEKKSKHKSKRAANEAQ 327
[Close]
BLAST of LR48_mrnaVigan10g089300 vs. DB:Swiss
Match: CCNH_XENLA (Cyclin-H OS=Xenopus laevis OX=8355 GN=ccnh PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.368e-32
Identity = 85/255 (33.33%), Postives = 144/255 (56.47%), Query Frame = 1 
Query:  187 SGEKHSRTKPLSIE--EEQCIRVFYENKLQEVCNNFR--FPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDH-------QMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEEFCNGGDDQLQMLKTLQDTARLEVDKMMLTDATLLFPPGQXXXXXXXXXXXXXXVIDFDSYLESIFQGQNSMHTMAELAESLHAIDSCVKKYKIPSEKELKHINRKLKSCWGHSS 918
            + EK   ++  S+E  EE  I  +YE +L + CN F+   P  +  TA +YFKRFYL  SVMEH P+ IMLTC++ ACK++E +VS+ +    + ++        + IL  E+++ Q L F LIV+ PYR  EGF+ID++         L+  + L+ +A   ++++ LTDA LLF P  +AL A+ ++ +    ++ +SYL      +++  TM+ L + +  +   V KY+    +E+  + ++L  C  HS+
Sbjct:   36 ATEKPRLSEIFSLEPHEELAICKYYEKRLLDFCNAFKPTMPKSVLGTACMYFKRFYLNNSVMEHHPRIIMLTCVFLACKVDEFNVSSIQFVGNLGENPLGQEKILEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDVK----TRYPMLENPEVLRKSADEFLNRVALTDACLLFAPSVIALTAILSTASRAG-LNMESYLTECLSLKDNQETMSHLLDGMRRLKILVSKYEPARPEEVAALKKRLDHC--HST 283
[Close]
BLAST of LR48_mrnaVigan10g089300 vs. DB:Swiss
Match: CCNH_RAT (Cyclin-H OS=Rattus norvegicus OX=10116 GN=Ccnh PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.987e-32
Identity = 87/246 (35.37%), Postives = 141/246 (57.32%), Query Frame = 1 
Query:  214 PLSIE--EEQCIRVFYENKLQEVCNNFR--FPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDH-------QMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEEFCNGGDDQLQMLKTLQDTARLEVDKMMLTDATLLFPPGQXXXXXXXXXXXXXXVIDFDSYLESIFQGQNSMHTMAELAESLHAIDSCVKKYKIPSEKELKHINRKLKSCWGHSS 918
            PL +E  EE  +  +YE +L E C+ F+   P  +  TA +YFKRFYL  SVME+ P+ IMLTC + ACK++E +VS+ +    + +         + IL  E+++ Q L F LIV+ PYR  EGF+ID++         L+  + L+ TA   + ++ LTDA LL+ P Q+AL A+ +S +    I  +SYL      + +   +++L + + ++ + VKKY+ P  +E+  + +KL+ C  HSS
Sbjct:   45 PLFLEPHEEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDIK----TRYPMLENPEILRKTADDFLSRIALTDAYLLYTPSQIALTAILSSASRAG-ITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAILKQKLERC--HSS 283
[Close]
BLAST of LR48_mrnaVigan10g089300 vs. DB:Swiss
Match: CCNH_BOVIN (Cyclin-H OS=Bos taurus OX=9913 GN=CCNH PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.985e-32
Identity = 83/234 (35.47%), Postives = 136/234 (58.12%), Query Frame = 1 
Query:  229 EEQCIRVFYENKLQEVCNNFR--FPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSA-------EELGKGISQDHQMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEEFCNGGDDQLQMLKTLQDTARLEVDKMMLTDATLLFPPGQXXXXXXXXXXXXXXVIDFDSYLESIFQGQNSMHTMAELAESLHAIDSCVKKYKIPSEKELKHINRKLKSC 903
            EE  +  +YE +L E C+ F+   P  +  TA +YFKRFYL  SVME+ P+ IMLTC + ACK++E +VS+        E   G  +  + IL  E+++ Q L F LIV+ PYR  EGF+ID++         L+  + L+ TA   ++++ LTDA LL+ P Q+AL A+ +S +    I  +SYL      + +  ++++L + + ++ + VKKY+ P  +E+  + +KL+ C
Sbjct:   52 EEITLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKTLEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLK----TRYPLLENPEILRKTADDFLNRVALTDAHLLYTPSQIALTAILSSASRAG-ITMESYLSESLMLKENRTSLSQLLDIMKSMRNLVKKYEPPRPEEVAALKQKLERC 280
[Close]
BLAST of LR48_mrnaVigan10g089300 vs. DB:Swiss
Match: CCNH_HUMAN (Cyclin-H OS=Homo sapiens OX=9606 GN=CCNH PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.558e-32
Identity = 81/234 (34.62%), Postives = 135/234 (57.69%), Query Frame = 1 
Query:  229 EEQCIRVFYENKLQEVCNNFR--FPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDH-------QMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEEFCNGGDDQLQMLKTLQDTARLEVDKMMLTDATLLFPPGQXXXXXXXXXXXXXXVIDFDSYLESIFQGQNSMHTMAELAESLHAIDSCVKKYKIPSEKELKHINRKLKSC 903
            EE  +  +YE +L E C+ F+   P  +  TA +YFKRFYL  SVME+ P+ IMLTC + ACK++E +VS+ +    + +         + IL  E+++ Q L F LIV+ PYR  EGF+ID++         L+  + L+ TA   ++++ LTDA LL+ P Q+AL A+ +S +    I  +SYL      + +   +++L + + ++ + VKKY+ P  +E+  + +KL+ C
Sbjct:   52 EEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLK----TRYPILENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAG-ITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERC 280
[Close]
BLAST of LR48_mrnaVigan10g089300 vs. DB:Swiss
Match: CCNH_MACFA (Cyclin-H OS=Macaca fascicularis OX=9541 GN=CCNH PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 8.647e-32
Identity = 81/234 (34.62%), Postives = 135/234 (57.69%), Query Frame = 1 
Query:  229 EEQCIRVFYENKLQEVCNNFR--FPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDH-------QMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEEFCNGGDDQLQMLKTLQDTARLEVDKMMLTDATLLFPPGQXXXXXXXXXXXXXXVIDFDSYLESIFQGQNSMHTMAELAESLHAIDSCVKKYKIPSEKELKHINRKLKSC 903
            EE  +  +YE +L E C+ F+   P  +  TA +YFKRFYL  SVME+ P+ IMLTC + ACK++E +VS+ +    + +         + IL  E+++ Q L F LIV+ PYR  EGF+ID++         L+  + L+ TA   ++++ LTDA LL+ P Q+AL A+ +S +    I  +SYL      + +   +++L + + ++ + VKKY+ P  +E+  + +KL+ C
Sbjct:   52 EEMTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLK----TRYPILENPEILRKTADDFLNRIALTDAYLLYTPSQIALTAILSSASRAG-ITMESYLSESLMLRENRTCLSQLLDIMKSMRNLVKKYEPPRSEEVAVLKQKLERC 280
[Close]
BLAST of LR48_mrnaVigan10g089300 vs. DB:Swiss
Match: CCNH_MOUSE (Cyclin-H OS=Mus musculus OX=10090 GN=Ccnh PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 9.790e-32
Identity = 84/239 (35.15%), Postives = 136/239 (56.90%), Query Frame = 1 
Query:  229 EEQCIRVFYENKLQEVCNNFR--FPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDH-------QMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEEFCNGGDDQLQMLKTLQDTARLEVDKMMLTDATLLFPPGQXXXXXXXXXXXXXXVIDFDSYLESIFQGQNSMHTMAELAESLHAIDSCVKKYKIPSEKELKHINRKLKSCWGHSS 918
            EE  +  +YE +L E C+ F+   P  +  TA +YFKRFYL  SVME+ P+ IMLTC + ACK++E +VS+ +    + +         + IL  E+++ Q L F LIV+ PYR  EGF+ID++         L+  + L+ TA   + ++ LTDA LL+ P Q+AL A+ +S +    I  +SYL      + +   +++L + + ++ + VKKY+ P   E+  + +KL+ C  HSS
Sbjct:   52 EELTLCKYYEKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNVSSPQFVGNLRESPLGQERALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDIK----TRYPMLENPEILRKTADDFLSRIALTDAYLLYTPSQIALTAILSSASRAG-ITMESYLSESLMLKENRTCLSQLLDIMKSMRNLVKKYEPPRSDEVAVLKQKLERC--HSS 283
[Close]
BLAST of LR48_mrnaVigan10g089300 vs. DB:Swiss
Match: CCNH_DICDI (Putative cyclin-H OS=Dictyostelium discoideum OX=44689 GN=cycH PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.047e-23
Identity = 56/171 (32.75%), Postives = 92/171 (53.80%), Query Frame = 1 
Query:  193 EKHSRTKP--LSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEE----FCNGGDDQLQMLKTLQDTARLEVDKMMLTDATLLFPP 687
            EK   ++P  LS ++E  +  +YE K  E+      P K+ A A+IY KRFYL+ S+M++  K +ML+C++ ACK E+NH+  +            I   E+I+ +SL F+LIVY P+R + G+I+D+ +    + N          TL +T +  + K + +D    F P
Sbjct:   36 EKTPSSEPNILSPDDELSLIHYYETKTLEIAMALNLPDKVSAPAIIYIKRFYLKNSIMQYGAKLVMLSCLFIACKTEDNHLDIDYYSNITKASPSDITNLEIIILESLNFNLIVYHPFRPMYGYILDINDNSAIYNNTNGVSPIKFDTLWETCKKSIQKSLFSDCCFEFHP 206
[Close]
BLAST of LR48_mrnaVigan10g089300 vs. DB:Swiss
Match: CCL1_YEAST (Cyclin CCL1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CCL1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.073e-22
Identity = 64/226 (28.32%), Postives = 111/226 (49.12%), Query Frame = 1 
Query:   16 TSTHRVKWIFTPQQLVEKYKAANQRAKHILEKYGATLMEVDVDGSLSYPEPQMTAKDSGEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEEFCNGGDDQLQMLKTLQDTARLEVDKMMLTDATLLFPPGQ 693
            +S +R+ W +T  QL EK    N RA   +E+      E             +T ++     ++  PL++EEE  +  FY  K+Q +  +   P ++ ATA+ +F+RF+L+ SVM+  PK I+ T I+ ACK E   +S +   +        +L  E  + +SL+F L+ + PY+ + GF +D++    G  D L  +  + D  +  +   +LTD    + P Q
Sbjct:   52 SSQYRM-WSYTKDQLQEKRVDTNARAIAYIEENLLKFREAH----------NLTEEEIKVLEAKAIPLTMEEELDLVNFYAKKVQVIAQHLNLPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKSTRDSVLKFEFKLLESLKFSLLNHHPYKPLHGFFLDIQNVLYGKVD-LNYMGQIYDRCKKRITAALLTDVVYFYTPPQ 265
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan10g089300 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
CCH11_ARATH2.892e-14065.77Cyclin-H1-1 OS=Arabidopsis thaliana OX=3702 GN=CYC... [more]
CCH11_ORYSJ2.789e-12963.33Cyclin-H1-1 OS=Oryza sativa subsp. japonica OX=399... [more]
CCNH_XENLA1.368e-3233.33Cyclin-H OS=Xenopus laevis OX=8355 GN=ccnh PE=1 SV... [more]
CCNH_RAT1.987e-3235.37Cyclin-H OS=Rattus norvegicus OX=10116 GN=Ccnh PE=... [more]
CCNH_BOVIN3.985e-3235.47Cyclin-H OS=Bos taurus OX=9913 GN=CCNH PE=2 SV=1[more]
CCNH_HUMAN8.558e-3234.62Cyclin-H OS=Homo sapiens OX=9606 GN=CCNH PE=1 SV=1[more]
CCNH_MACFA8.647e-3234.62Cyclin-H OS=Macaca fascicularis OX=9541 GN=CCNH PE... [more]
CCNH_MOUSE9.790e-3235.15Cyclin-H OS=Mus musculus OX=10090 GN=Ccnh PE=1 SV=... [more]
CCNH_DICDI5.047e-2332.75Putative cyclin-H OS=Dictyostelium discoideum OX=4... [more]
CCL1_YEAST1.073e-2228.32Cyclin CCL1 OS=Saccharomyces cerevisiae (strain AT... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 87..168
e-value: 6.6E-15
score: 65.5
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 82..148
e-value: 1.27793E-13
score: 63.7968
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 82..174
e-value: 4.8E-12
score: 45.6
NoneNo IPR availableGENE3D1.10.472.10coord: 60..301
e-value: 1.5E-63
score: 216.6
NoneNo IPR availableGENE3D1.10.472.10coord: 179..284
e-value: 1.5E-63
score: 216.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..335
IPR031658Cyclin, C-terminal domain 2PFAMPF16899Cyclin_C_2coord: 179..280
e-value: 1.2E-12
score: 48.0
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 66..176
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 179..305

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g089300; organism=Vigna angularis; type=mRNA; length=4347bp
ATGGCTGATTTTATGACCTCTACTCATCGAGTGAAGTGGATTTTTACCCC
TCAACAGCTGGTAATTTTTGGCTTCTGCCTTTGCTATTCATCTAAAAACA
AGATTCATAGTCACATTTGTTACCTCAACAGAGGCTGATATAATTTTTCT
GTGGAAGAGGGGGGTTTAGGGAAAACAGGAAAATCTATTTTCTGTGATAT
TATTTGTACAGTTTACTGTTTTCATTTTTTCTTAAATCTATTTTGGTTTT
AGGTTGAGAAATATAAAGCAGCTAATCAGAGAGCCAAACACATTCTAGAG
AAGGTATACAGACTTTTCCCCTGCCTTATAAGTATCTTCATAAATTAATG
CAAGTTTTTAGCCAGCAAGATTTTGGACCGTACAACCTTATAGTATTTGT
TGTTGCATATTTTTGTGAACAATGTGGCTGTTTGGGCGCTGCTTTTCCCT
TAGACCTTGTAGACAGAGGTTGGGCTGGTGAGTTTGGATACACCACCTGA
CATTTATTCAAGAATCTCTTGTCACATGGGAGCATATGTCATAAATTTGG
TGATAAAACTTGCTTGAATAAGTTAGTTGAAGAGCTTATTTGGATATGGT
ACCCTGAGAAATTTATTGAAATAACCTTAAAAGAGCCTTTGGGAGTCATA
AATTTAAATGAGCTCCACAAAAGTAACTGTTTGATATTTCATGGTATCTT
TTGAAAGTTTGGTATTTGGCTGATGATGACTATTAATTTTTAAACAAGTA
TGGTGCAACTCTAATGGAAGTAGATGTTGATGGATCATTGTCATATCCTG
AACCCCAGATGACTGCAAAAGACAGTGGTAATGTTTTTTCTACAAATTTG
ATTCATTTTTCTCTCAATATGTAGACAGCAATTTGTCTTTTAATTTTCTA
ATCGTTTTCAAAGTATTTCATTACTATTTTGTTCCCCCTAATTGTCTGTG
TGAATTTCTATTTTCTACGGTTCACGAGGGTTGTATTTTATGTTAGGTGA
GAAGCATTCTCGGACAAAACCTCTTAGTATTGAAGAAGAACAATGCATAC
GGGTATTTTATGAAAACAAGCTACAAGAAGTATGTAACAACTTCCGCTTC
CCTCATAAGATCCAGGTATGCAAGCCTGTGGAACGAGTTGATTAGGGAAA
CAATGTTTTCTATTATAATTATTTTTGATTAGTTTGTAATATACAGGCAA
CAGCCCTTATCTATTTTAAAAGATTCTATCTACAATGGTCGGTGATGGAA
CATCAACCAAAACATATTATGTAAGATTTGCTTTCAGACTTATGAGGATC
TCTAATCTAAGGATGATGGATGCATCACACTTGTATTTTCGAACATATTA
AATTGGAGTTTAAATTGATAATTATAGGGAATTCGTTACTTTATTTATTT
GTTGGTATTGGTAGGGTGATTGCACCTGGTGCGATGCTTACTTTCTGTGG
ATTAGTCATTAGTTTTTTCTTTTGATTAATATTATTATCCTTTTGATCTT
ATTCCTTATTTTTTTATGGTTTGGTTTGAGTGGTTACCTGTTTAGTTGTC
ATAAGTTTATTGGATTGGTATGATTATTTATATATATTTTTTCAATCTTT
CTTTTTTACTTGTTAGCTTCTCACTGTATCAGATTGAATTTTTCTCAGGT
TGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTGTCGGCT
GAGGAGCTTGGTAAGGGGATCTCACAGGATCATCAAATGATTCTCATTAA
TGAGATGATAGTTTATCAGGCATGGACGGCCCCAAATAAGAAAATGATCT
ATTTTTTATTTTTTGTTTTTGTTCATCTATGACATGAAACCTTTGTCTTG
CAGAGTTTGGAATTTGATCTAATTGTGTATGCGCCATATCGCTCGGTTGA
AGGTTTTATAATTGATATGGAGGTTGGTCTGGTTGGCACGAGTGGATTTT
TTTAAAATGTTAATTTTATTAAATTATTTCTGCATCTCACAAAGTCAAGA
AATATGACACTTTCTCTCTTTTTCTGGCTTAGTAATTTCTTGACTTGGCT
GATATAAACTGTGTTCTTTAGTGATTTTTTTTATGCTAAGTTTTATCTAT
TGGCATAGGCAGGAATTTTGCAATGGTGGTGATGATCAGCTTCAAATGCT
TAAGGTACTTATATTCCTATTGCCCAAAGAAATTGGTTGATATCTTCCCG
AGCCCATAGTTGTTGTGACTGTGAGCAAATGGAACTCTTTTTTCTTTTTA
TTTGTAGGCTGTGTTTTGTAACATTTCCTCCCTCCCACCCTAAATTTATG
TGACAATTGGTGGTTATTGGGCTGTATGTTACTATCCTTTTCATAAAAAT
AACTTTTATAACTTAGTCACTGCTAAAAGTTTTACACGCATTTGTTTAAA
CCTTTCAATATAATTAGAAGATGAAAAAAAAATCTATAATTTGATAGAAA
TTAGTAGGTATTTTGAATAGCTTCTTAGTAATAACAGTTTATTTTTAGAA
GTGTCTTTTATGATTGTAAACAAACATAATTTTACTTGTTTTTCTAAAAT
TTGATCACTAGATTATTTTGTACCAGAATCATTTTTTTATCTGTAACAGA
CCTGCTCAGTCATTTCGTTTCTGCAACTAAAGTTTATTCTAAAACATAAT
AAATTTAAATAATTTATGTTGGGAACTGTACATCTTGCAGTTGAAAATGG
TCTCTATCCATTTATTCCGCTCTTGAAATATAAATATGTTGCTCTACTTT
TTAATTGGCATTTTTCAAAATATTGAGCAGTGTAAAGAACTATAAAAATA
AAAGGTATTGAGGCAATTTCTTTCTATACACTCGGCCATATCAAATGAAA
GGTGTGAAGAGGTCCACATGAGCCATTCTCACATCTGATTTTTTCGTGAT
GAACTTCTAACATGTGTAGTGATGGGTTCCTTTATTCCTTTCTCTTATGG
AGCAATGTTTTGTACATGTTTAACCATTGTTCTTCCCTAGGTATAAAAAC
TTCATGCATCCTCTTTATTTGGACATGTTCACTGACATTTGATAATTTTT
GGTTGATGTTATACAGACTTTGCAAGATACAGCAAGGTTGGAAGTTGATA
AAATGATGCTTACAGATGCAACACTTTTATTTCCTCCTGGGCAGGTATTC
TAGAAAAAATCTATCTATTTAGCTATCTATTAGATAGTTGATAGATAAAT
AGAGCTATGTTTTTGTTTAACAGCAGCCACAACACAAATTTTCCTTGCTC
TTTCTTGCCTTTATCAACTATTTAAAATAAAGGATTACATGTTTTGTAAT
TAAAGTCAGTTTATACGCCAAAATCAAGTAATCATGTCACTAATCACAAC
CCAGTCTTATGAACTAAATTTAAGAAAGAGTAGTCAACCATTAATCACTT
AATGTAAATCGATTAACCATTGTCATTATTTTTTAATTTCAGTTGATTGT
TTCAAAATTTGAAATATGCTTGCCAGGTTTTCCATATCATCAGAAAAACA
GTAACCTAAGTAATACCTCTCAATTACTGATTTGCAGCTAAACATTTTCT
AGCAATCTAGACTCAATATTCTACTTTAGCTCTGTTTTAAACAATTTTAC
ATCAAAATCTAACCTTCCTGTTTGTCTTATGAAGTTGGCCTTGGCTGCTC
TGGGTAACTCAAATGCACTGCACAATGTCATTGACTTTGATAGGTACTTA
TAATTGCTTCACATGTTTATTTCCGATAATCTATTCTGAACCTTCCCCCT
GTTCTTTTCCCTTTTGTTATCTGTTACAAAATCACGTAACAAAATGGCCT
GCCTGAGATGTGTTATTGTAGTATATATTCACTCTATCCCGGCACTTAAT
TGCAGTTATCTTGAGAGCATTTTTCAAGGTCAGAATTCCATGCACACAAT
GGCCGAGCTTGCTGAATCACTGCATGCAATTGATTCCTGTGTAATTGTTT
CTCATTCTGATATTTGTCATTAAAGTCAACAACTGATGTCAAATTCCCGA
ATCAATATTTTGTATTGGGCAGGAATCGTGGTTTTCTTCTGTTTTACGTG
TGGACCATTGTGGTATGCAGGTTAAAAAGTACAAAATTCCTTCTGAGAAG
GAATTGAAGCATATCAACCGAAAACTGAAGTCTTGTTGGGGTCATAGCTC
TCATGACGAGTACTTCTTTCAACCTTATATTGAATTACATGCCGGTTCTA
AAAATCTACCTAAAAGAAAAAACCTGTTGTACTGTATAATTAATAACTTT
GGCTTTTTTTTACAGGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAGT
CCAAAAGGAGCTCAAATGAGGCACAAAATATGGCATCTCTTGCCTAG
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protein sequence of LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1

>LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=335bp
MADFMTSTHRVKWIFTPQQLVEKYKAANQRAKHILEKYGATLMEVDVDGS
LSYPEPQMTAKDSGEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPH
KIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGK
GISQDHQMILINEMIVYQSLEFDLIVYAPYRSVEGFIIDMEEFCNGGDDQ
LQMLKTLQDTARLEVDKMMLTDATLLFPPGQLALAALGNSNALHNVIDFD
SYLESIFQGQNSMHTMAELAESLHAIDSCVKKYKIPSEKELKHINRKLKS
CWGHSSHDEGKKREKKSKHKSKRSSNEAQNMASLA
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mRNA from alignment at Chr_10-CM003380.1:11057149..11061495-

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g089300; organism=Vigna angularis; type=mRNA; length=4347bp; location=Sequence derived from: Chr_10-CM003380.1:11057149..11061495- (Vigna angularis
ATGGCTGATTTTATGACCTCTACTCATCGAGTGAAGTGGATTTTTACCCC
TCAACAGCTGGTAATTTTTGGCTTCTGCCTTTGCTATTCATCTAAAAACA
AGATTCATAGTCACATTTGTTACCTCAACAGAGGCTGATATAATTTTTCT
GTGGAAGAGGGGGGTTTAGGGAAAACAGGAAAATCTATTTTCTGTGATAT
TATTTGTACAGTTTACTGTTTTCATTTTTTCTTAAATCTATTTTGGTTTT
AGGTTGAGAAATATAAAGCAGCTAATCAGAGAGCCAAACACATTCTAGAG
AAGGTATACAGACTTTTCCCCTGCCTTATAAGTATCTTCATAAATTAATG
CAAGTTTTTAGCCAGCAAGATTTTGGACCGTACAACCTTATAGTATTTGT
TGTTGCATATTTTTGTGAACAATGTGGCTGTTTGGGCGCTGCTTTTCCCT
TAGACCTTGTAGACAGAGGTTGGGCTGGTGAGTTTGGATACACCACCTGA
CATTTATTCAAGAATCTCTTGTCACATGGGAGCATATGTCATAAATTTGG
TGATAAAACTTGCTTGAATAAGTTAGTTGAAGAGCTTATTTGGATATGGT
ACCCTGAGAAATTTATTGAAATAACCTTAAAAGAGCCTTTGGGAGTCATA
AATTTAAATGAGCTCCACAAAAGTAACTGTTTGATATTTCATGGTATCTT
TTGAAAGTTTGGTATTTGGCTGATGATGACTATTAATTTTTAAACAAGTA
TGGTGCAACTCTAATGGAAGTAGATGTTGATGGATCATTGTCATATCCTG
AACCCCAGATGACTGCAAAAGACAGTGGTAATGTTTTTTCTACAAATTTG
ATTCATTTTTCTCTCAATATGTAGACAGCAATTTGTCTTTTAATTTTCTA
ATCGTTTTCAAAGTATTTCATTACTATTTTGTTCCCCCTAATTGTCTGTG
TGAATTTCTATTTTCTACGGTTCACGAGGGTTGTATTTTATGTTAGGTGA
GAAGCATTCTCGGACAAAACCTCTTAGTATTGAAGAAGAACAATGCATAC
GGGTATTTTATGAAAACAAGCTACAAGAAGTATGTAACAACTTCCGCTTC
CCTCATAAGATCCAGGTATGCAAGCCTGTGGAACGAGTTGATTAGGGAAA
CAATGTTTTCTATTATAATTATTTTTGATTAGTTTGTAATATACAGGCAA
CAGCCCTTATCTATTTTAAAAGATTCTATCTACAATGGTCGGTGATGGAA
CATCAACCAAAACATATTATGTAAGATTTGCTTTCAGACTTATGAGGATC
TCTAATCTAAGGATGATGGATGCATCACACTTGTATTTTCGAACATATTA
AATTGGAGTTTAAATTGATAATTATAGGGAATTCGTTACTTTATTTATTT
GTTGGTATTGGTAGGGTGATTGCACCTGGTGCGATGCTTACTTTCTGTGG
ATTAGTCATTAGTTTTTTCTTTTGATTAATATTATTATCCTTTTGATCTT
ATTCCTTATTTTTTTATGGTTTGGTTTGAGTGGTTACCTGTTTAGTTGTC
ATAAGTTTATTGGATTGGTATGATTATTTATATATATTTTTTCAATCTTT
CTTTTTTACTTGTTAGCTTCTCACTGTATCAGATTGAATTTTTCTCAGGT
TGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTGTCGGCT
GAGGAGCTTGGTAAGGGGATCTCACAGGATCATCAAATGATTCTCATTAA
TGAGATGATAGTTTATCAGGCATGGACGGCCCCAAATAAGAAAATGATCT
ATTTTTTATTTTTTGTTTTTGTTCATCTATGACATGAAACCTTTGTCTTG
CAGAGTTTGGAATTTGATCTAATTGTGTATGCGCCATATCGCTCGGTTGA
AGGTTTTATAATTGATATGGAGGTTGGTCTGGTTGGCACGAGTGGATTTT
TTTAAAATGTTAATTTTATTAAATTATTTCTGCATCTCACAAAGTCAAGA
AATATGACACTTTCTCTCTTTTTCTGGCTTAGTAATTTCTTGACTTGGCT
GATATAAACTGTGTTCTTTAGTGATTTTTTTTATGCTAAGTTTTATCTAT
TGGCATAGGCAGGAATTTTGCAATGGTGGTGATGATCAGCTTCAAATGCT
TAAGGTACTTATATTCCTATTGCCCAAAGAAATTGGTTGATATCTTCCCG
AGCCCATAGTTGTTGTGACTGTGAGCAAATGGAACTCTTTTTTCTTTTTA
TTTGTAGGCTGTGTTTTGTAACATTTCCTCCCTCCCACCCTAAATTTATG
TGACAATTGGTGGTTATTGGGCTGTATGTTACTATCCTTTTCATAAAAAT
AACTTTTATAACTTAGTCACTGCTAAAAGTTTTACACGCATTTGTTTAAA
CCTTTCAATATAATTAGAAGATGAAAAAAAAATCTATAATTTGATAGAAA
TTAGTAGGTATTTTGAATAGCTTCTTAGTAATAACAGTTTATTTTTAGAA
GTGTCTTTTATGATTGTAAACAAACATAATTTTACTTGTTTTTCTAAAAT
TTGATCACTAGATTATTTTGTACCAGAATCATTTTTTTATCTGTAACAGA
CCTGCTCAGTCATTTCGTTTCTGCAACTAAAGTTTATTCTAAAACATAAT
AAATTTAAATAATTTATGTTGGGAACTGTACATCTTGCAGTTGAAAATGG
TCTCTATCCATTTATTCCGCTCTTGAAATATAAATATGTTGCTCTACTTT
TTAATTGGCATTTTTCAAAATATTGAGCAGTGTAAAGAACTATAAAAATA
AAAGGTATTGAGGCAATTTCTTTCTATACACTCGGCCATATCAAATGAAA
GGTGTGAAGAGGTCCACATGAGCCATTCTCACATCTGATTTTTTCGTGAT
GAACTTCTAACATGTGTAGTGATGGGTTCCTTTATTCCTTTCTCTTATGG
AGCAATGTTTTGTACATGTTTAACCATTGTTCTTCCCTAGGTATAAAAAC
TTCATGCATCCTCTTTATTTGGACATGTTCACTGACATTTGATAATTTTT
GGTTGATGTTATACAGACTTTGCAAGATACAGCAAGGTTGGAAGTTGATA
AAATGATGCTTACAGATGCAACACTTTTATTTCCTCCTGGGCAGGTATTC
TAGAAAAAATCTATCTATTTAGCTATCTATTAGATAGTTGATAGATAAAT
AGAGCTATGTTTTTGTTTAACAGCAGCCACAACACAAATTTTCCTTGCTC
TTTCTTGCCTTTATCAACTATTTAAAATAAAGGATTACATGTTTTGTAAT
TAAAGTCAGTTTATACGCCAAAATCAAGTAATCATGTCACTAATCACAAC
CCAGTCTTATGAACTAAATTTAAGAAAGAGTAGTCAACCATTAATCACTT
AATGTAAATCGATTAACCATTGTCATTATTTTTTAATTTCAGTTGATTGT
TTCAAAATTTGAAATATGCTTGCCAGGTTTTCCATATCATCAGAAAAACA
GTAACCTAAGTAATACCTCTCAATTACTGATTTGCAGCTAAACATTTTCT
AGCAATCTAGACTCAATATTCTACTTTAGCTCTGTTTTAAACAATTTTAC
ATCAAAATCTAACCTTCCTGTTTGTCTTATGAAGTTGGCCTTGGCTGCTC
TGGGTAACTCAAATGCACTGCACAATGTCATTGACTTTGATAGGTACTTA
TAATTGCTTCACATGTTTATTTCCGATAATCTATTCTGAACCTTCCCCCT
GTTCTTTTCCCTTTTGTTATCTGTTACAAAATCACGTAACAAAATGGCCT
GCCTGAGATGTGTTATTGTAGTATATATTCACTCTATCCCGGCACTTAAT
TGCAGTTATCTTGAGAGCATTTTTCAAGGTCAGAATTCCATGCACACAAT
GGCCGAGCTTGCTGAATCACTGCATGCAATTGATTCCTGTGTAATTGTTT
CTCATTCTGATATTTGTCATTAAAGTCAACAACTGATGTCAAATTCCCGA
ATCAATATTTTGTATTGGGCAGGAATCGTGGTTTTCTTCTGTTTTACGTG
TGGACCATTGTGGTATGCAGGTTAAAAAGTACAAAATTCCTTCTGAGAAG
GAATTGAAGCATATCAACCGAAAACTGAAGTCTTGTTGGGGTCATAGCTC
TCATGACGAGTACTTCTTTCAACCTTATATTGAATTACATGCCGGTTCTA
AAAATCTACCTAAAAGAAAAAACCTGTTGTACTGTATAATTAATAACTTT
GGCTTTTTTTTACAGGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAGT
CCAAAAGGAGCTCAAATGAGGCACAAAATATGGCATCTCTTGCCTAG
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Coding sequence (CDS) from alignment at Chr_10-CM003380.1:11057149..11061495-

>LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g089300_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g089300; organism=Vigna angularis; type=CDS; length=1008bp; location=Sequence derived from: Chr_10-CM003380.1:11057149..11061495- (Vigna angularis
ATGGCTGATTTTATGACCTCTACTCATCGAGTGAAGTGGATTTTTACCCC
TCAACAGCTGGTTGAGAAATATAAAGCAGCTAATCAGAGAGCCAAACACA
TTCTAGAGAAGTATGGTGCAACTCTAATGGAAGTAGATGTTGATGGATCA
TTGTCATATCCTGAACCCCAGATGACTGCAAAAGACAGTGGTGAGAAGCA
TTCTCGGACAAAACCTCTTAGTATTGAAGAAGAACAATGCATACGGGTAT
TTTATGAAAACAAGCTACAAGAAGTATGTAACAACTTCCGCTTCCCTCAT
AAGATCCAGGCAACAGCCCTTATCTATTTTAAAAGATTCTATCTACAATG
GTCGGTGATGGAACATCAACCAAAACATATTATGTTGACCTGCATATATG
CTGCTTGTAAGATAGAAGAAAATCATGTGTCGGCTGAGGAGCTTGGTAAG
GGGATCTCACAGGATCATCAAATGATTCTCATTAATGAGATGATAGTTTA
TCAGAGTTTGGAATTTGATCTAATTGTGTATGCGCCATATCGCTCGGTTG
AAGGTTTTATAATTGATATGGAGGAATTTTGCAATGGTGGTGATGATCAG
CTTCAAATGCTTAAGACTTTGCAAGATACAGCAAGGTTGGAAGTTGATAA
AATGATGCTTACAGATGCAACACTTTTATTTCCTCCTGGGCAGTTGGCCT
TGGCTGCTCTGGGTAACTCAAATGCACTGCACAATGTCATTGACTTTGAT
AGTTATCTTGAGAGCATTTTTCAAGGTCAGAATTCCATGCACACAATGGC
CGAGCTTGCTGAATCACTGCATGCAATTGATTCCTGTGTTAAAAAGTACA
AAATTCCTTCTGAGAAGGAATTGAAGCATATCAACCGAAAACTGAAGTCT
TGTTGGGGTCATAGCTCTCATGACGAGGGCAAGAAGCGGGAGAAGAAATC
AAAGCACAAGTCCAAAAGGAGCTCAAATGAGGCACAAAATATGGCATCTC
TTGCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR031658Cyclin_C_2
IPR036915Cyclin-like_sf