LR48_mrnaVigan10g092200

Transcript Overview
NameLR48_mrnaVigan10g092200
Unique NameLR48_mrnaVigan10g092200_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length1208
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_10-CM003380.1supercontigChr_10-CM003380.1:11309795..11311002 +Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR261Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR277Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR297Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL099Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0489Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0686Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0745Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0920Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1230Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR342Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR352Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0429Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0434Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0452Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR290Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR325Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR327Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR285Pisum sativum Cameor genome v1aPisum sativum
aspsR296Pisum sativum Cameor genome v1aPisum sativum
aspvR315Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR320Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR262Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR265Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR287Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR292Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR305Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR307Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR297Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR302Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR316Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR195Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR252Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR324Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR331Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR334Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR241Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR250Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR237Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR248Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Cr_09158.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Cr_08149.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_014656614.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004495689.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_03703Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Phvul.007G181900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Phvul.006G093900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-TanjilR_15577Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_010500Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_01181Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Hedin2.R1.5g181280.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun07g149000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_004494578.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
evm.model.Chr06.1161Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
evm.model.Chr07.1325.1.62113177Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_29297Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_09251.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_07639.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-KK1_007037Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Tiffany.R1.3g070520.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Hedin2.R1.3g085520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat6g149360.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_21508Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014662190.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg3194.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
jg30957.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.5g142400.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun06g104200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan09g154400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan10g092200gene-LR48_Vigan10g092200_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g092200LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-start_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11309795..11309797LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-start_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11309795..11309797Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11309795..11310274LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11309795..11310274Vigna angularisexon
LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11310396..11310806LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11310396..11310806Vigna angularisexon
LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11310907..11311002LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11310907..11311002Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11310275..11310395LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11310275..11310395Vigna angularisintron
LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11310807..11310906LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11310807..11310906Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS15779CDS15779_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-stop_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11311000..11311002LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1-stop_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11311000..11311002Vigna angularisstop_codon


Homology
BLAST of LR48_mrnaVigan10g092200 vs. DB:Swiss
Match: BH096_ARATH (Transcription factor bHLH96 OS=Arabidopsis thaliana OX=3702 GN=BHLH96 PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.003e-78
Identity = 165/344 (47.97%), Postives = 208/344 (60.47%), Query Frame = 1
Query:    1 MALEAVVFSQSQDPFGGYGSVKDF--YNCTFLAATSPNWGDYXXXXXXXXXXXXQGSISTFLDNSNN-----QPDNYPYGGD---WTSSSSSILPHLNDLQEATDPSNATHSLDTLTTRPKRRRAKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQ-KEGERKSDAG--------GATNMPFSEFFAFPQYSTXXXXXXXDNSATVGEDVGEVKSGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHTMRLTILHLNVTTTGEIVLYSLSVKVEDDCKLGSVDDIAEAVYQTLDRIQQEA 975
            MALEAVV+ Q  DPF  Y S KDF  Y+  F      +  D        + +  QG    F  N+ N       D+Y Y  +   W       LP+ + +   + P  +   +     R KRRR +S KNKEEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP  Y QRGDQASI+GGAIN++KELE  L  +    K     + AG         +++ PFS+FFAFPQYS          SA   E       G+A+IEVTMVESHA+LKI +KKRP+QLLKLVS + ++RLT+LHLNVTT  + VLYS+SVKVE+  +L +V+DIA AV Q L RI++E+
Sbjct:    1 MALEAVVYPQ--DPFS-YISCKDFPFYDLYFQEEEDQDPQD-----TKNNIKLGQGQGHGFASNNYNGRTGDYSDDYNYNEEDLQWPRD----LPYGSAVDTESQPPPS--DVAAGGGRRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRP------TSAAAAE-------GMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVLYSISVKVEEGSQLNTVEDIAAAVNQILRRIEEES 317          
BLAST of LR48_mrnaVigan10g092200 vs. DB:Swiss
Match: BH094_ARATH (Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 1.150e-72
Identity = 120/211 (56.87%), Postives = 157/211 (74.41%), Query Frame = 1
Query:  355 KNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQ--KEGERKSDAGGATNM--PFSEFFAFPQYSTXXXXXXXDNSATVGEDVGEVKSGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHTMRLTILHLNVTTTGEIVLYSLSVKVEDDCKLGSVDDIAEAVYQTLDRIQQEA 975
            KNKEEIENQRMTHIAVERNRRKQMNEYL+VLRSLMP SY QRGDQASI+GGAIN+VKELE  L  +  +  +  + K D    +++  PF++FF+FPQYST       ++S++            A+IEVT+ ESHAN+KI +KK+P+QLLKL++ L ++RLT+LHLNVTT    +LYS+SV+VE+  +L +VDDIA A+ QT+ RIQ+E 
Sbjct:  105 KNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSP-----------AEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLNTVDDIATALNQTIRRIQEET 304          
BLAST of LR48_mrnaVigan10g092200 vs. DB:Swiss
Match: BH057_ARATH (Transcription factor bHLH57 OS=Arabidopsis thaliana OX=3702 GN=BHLH57 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 2.591e-54
Identity = 95/208 (45.67%), Postives = 140/208 (67.31%), Query Frame = 1
Query:  355 KNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQKEGERKSDAGGATNMPFSEFFAFPQYSTXXXXXXXDNSATVGEDVGEVKSGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHTMRLTILHLNVTTTGEIVLYSLSVKVEDDCKLGSVDDIAEAVYQTLDRIQQEAV 978
            KNK+E+ENQRMTHIAVERNRR+QMNE+L+ LRSLMP S++QRGDQASI+GGAI+F+KELEQ L  L A+K  +   +     +   S   A    S S     S+N  T     G+      ++E T++++H +LK+R K+  +Q+LK +  +  ++L ILHL ++++ + V+YS ++K+ED CKLGS D+IA AV+Q  ++I  E +
Sbjct:  105 KNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDT----TEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMEDGCKLGSADEIATAVHQIFEQINGEVM 308          
BLAST of LR48_mrnaVigan10g092200 vs. DB:Swiss
Match: FAMA_ARATH (Transcription factor FAMA OS=Arabidopsis thaliana OX=3702 GN=FAMA PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.825e-51
Identity = 101/222 (45.50%), Postives = 138/222 (62.16%), Query Frame = 1
Query:  322 TRPKRRRAKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQKE----GERKSDAGGATNMPFSEFFAFPQYS----TXXXXXXXDNSATVGEDVGEVKSGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHTMRLTILHLNVTTTGEIVLYSLSVKVEDDCKLGSVDDIAEAVYQTLDRI 963
             + KR+RA++ K  EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP SY+QRGDQASIIGGAI FV+ELEQ L  L +QK     GE   D    T    S        +     +G     +    + E+  E KS +AD+EV ++   A +KI S++RP QL+K ++ L  + L+ILH N+TT  + VLYS +VK+  + +  + +DIA ++ Q    I
Sbjct:  176 VKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNITTMEQTVLYSFNVKITSETRF-TAEDIASSIQQIFSFI 396          
BLAST of LR48_mrnaVigan10g092200 vs. DB:Swiss
Match: BH099_ARATH (Transcription factor bHLH99 OS=Arabidopsis thaliana OX=3702 GN=BHLH99 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.022e-50
Identity = 92/202 (45.54%), Postives = 139/202 (68.81%), Query Frame = 1
Query:  373 ENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQKEGERKSDAGGATNMPFSEFFAFPQYSTXXXXXXXDNSATVGEDVGEVK-SGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHTMRLTILHLNVTTTGEIVLYSLSVKVEDDCKLG-SVDDIAEAVYQTLDRIQQE 972
            ENQRM HIAVERNRRKQMN +LS+L+S+MP SY Q  DQASII G I+++K+LEQRL  L AQ +  + + +       FS+FF FPQYST+     +  S++        +   +AD+EVTMVE HAN+K+ +K +P+ L K+++  +++ L+ LHLN+TT+ ++ L++ SVKVE DC+L  S +++A  V++ + R+ +E
Sbjct:   98 ENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKKLEQRLQSLEAQLKATKLNQSPNI----FSDFFMFPQYSTATATATATASSSSSSHHHHKRLEVVADVEVTMVERHANIKVLTKTQPRLLFKIINEFNSLGLSTLHLNLTTSKDMSLFTFSVKVEADCQLTPSGNEVANTVHEVVRRVHKE 295          
BLAST of LR48_mrnaVigan10g092200 vs. DB:Swiss
Match: BH071_ARATH (Transcription factor bHLH71 OS=Arabidopsis thaliana OX=3702 GN=BHLH71 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.476e-49
Identity = 107/234 (45.73%), Postives = 144/234 (61.54%), Query Frame = 1
Query:  355 KNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQKEGERK----------SDAGGATNMP-------FSEFFAFPQYSTXXXXXXXDNSATVGEDVGEVKSGIADIEVTMVESHANLKIRSKKR-----------PKQLLKLVSGLHTMRLTILHLNVTTTGEIVLYSLSVKVEDDCKLGSVDDIAEAVYQTLDRIQQE 972
            KN+EE ENQRMTHIAVERNRR+QMN++LSVLRSLMP  +  +GDQASI+GGAI+F+KELE +L  L AQK    K           D+ G    P        S+FF      +      + N +T       VK+ + D+EVT++E+HAN++I S++R           P QL KLV+ L ++ L+ILHL+VTT     +YS+S KVE+ C+L SVDDIA AV+  L  I++E
Sbjct:   78 KNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHHNAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFF----LHSYDPSQENRNGST-----SSVKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLSKLVASLQSLSLSILHLSVTTLDNYAIYSISAKVEESCQLSSVDDIAGAVHHMLSIIEEE 302          
BLAST of LR48_mrnaVigan10g092200 vs. DB:Swiss
Match: BH070_ARATH (Transcription factor bHLH70 OS=Arabidopsis thaliana OX=3702 GN=BHLH70 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.671e-49
Identity = 94/201 (46.77%), Postives = 129/201 (64.18%), Query Frame = 1
Query:  358 NKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQKEGERKSDAGGATNMPFSEFFAFPQYSTXXXXXXXDNSATVGEDVGEVKSGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHTMRLTILHLNVTT-TGEIVLYSLSVKVEDDCKLGSVDDIAEAVYQTLD 957
            N EEIE+QRMTHIAVERNRR+QMN +L+ LRS++P SYIQRGDQASI+GGAI+FVK LEQ+L  L AQK  ++  D               P+ ++      +   A+  E+    +S    IE T++ESH NLKI+  ++  QLL+ +  L  +R T+LHLN+T+ T   V YS ++K+ED+C LGS D+I  A+ Q  D
Sbjct:  184 NIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQKRSQQSDDNKEQ----------IPEDNSLRNISSNKLRASNKEE----QSSKLKIEATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGSADEITAAIRQIFD 370          
BLAST of LR48_mrnaVigan10g092200 vs. DB:Swiss
Match: BH067_ARATH (Transcription factor bHLH67 OS=Arabidopsis thaliana OX=3702 GN=BHLH67 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.770e-45
Identity = 94/202 (46.53%), Postives = 136/202 (67.33%), Query Frame = 1
Query:  355 KNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQKEGERKSDAGGATNMPFSEFFAFPQYSTXXXXXXXDNSATVGEDVGEVKSGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHTMRLTILHLNVTT-TGEIVLYSLSVKVEDDCKLGSVDDIAEAVYQTLD 957
            KN EEIENQR+ HIAVERNRR+QMNE+++ LR+L+P SYIQRGDQASI+GGAIN+VK LEQ +  L +QK  +++S++    N       A    S    G  S++  T  ED    ++ I  IE T++++H +LK++ +K+  QLLK +  L  ++LT+LHLN+TT +   V YS ++K+ED+C L S D+I  AV++  D
Sbjct:  168 KNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQIIQSLESQKRTQQQSNSEVVEN-------ALNHLS----GISSNDLWTTLED----QTCIPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDECDLESADEITAAVHRIFD 354          
BLAST of LR48_mrnaVigan10g092200 vs. DB:Swiss
Match: MUTE_ARATH (Transcription factor MUTE OS=Arabidopsis thaliana OX=3702 GN=MUTE PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.301e-30
Identity = 73/192 (38.02%), Postives = 101/192 (52.60%), Query Frame = 1
Query:  385 MTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQKEG---------------ERKSDAGGATNMPFSEFFAFPQYSTXXXXXXXDNSATVGEDVGEVKSGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHTMRLTILHLNVTTTGEIVLYSLSVKVEDDCKLG 915
            M+HIAVERNRR+QMNE+L  LRSL P  YI+RGDQASIIGG I F+KEL+Q +  L ++K                 E  S     T +PFS        ST    G   NS              A++E  +  S+  L++ S++   QL+K++S L  +   +LHLN+++  E VLY   VK+  +C L 
Sbjct:    1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPH------------ANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHLS 180          
BLAST of LR48_mrnaVigan10g092200 vs. DB:Swiss
Match: SPCH_ARATH (Transcription factor SPEECHLESS OS=Arabidopsis thaliana OX=3702 GN=SPCH PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.143e-20
Identity = 40/63 (63.49%), Postives = 53/63 (84.13%), Query Frame = 1
Query:  379 QRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQKE 567
            Q+M+H+ VERNRRKQMNE+L+VLRSLMP  Y++RGDQASIIGG + ++ EL+Q L  L A+K+
Sbjct:  100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQ 162          

HSP 2 Score: 62.3882 bits (150), Expect = 1.218e-9
Identity = 32/94 (34.04%), Postives = 57/94 (60.64%), Query Frame = 1
Query:  673 SATVGEDVGEVKSGIADIEVTMVESHANLKIRSKKRPKQLLKLVSGLHTMRLTILHLNVTTTGEIVLYSLSVKVEDDCKLGSVDDIAEAVYQTL 954
            S+ + E V   KS +AD+EV    ++  LK  S K P Q++K+++ L  + L IL +N+ T  E +L S ++K+  +C+L S +++A+ + QT 
Sbjct:  271 SSVINELVANSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNSFTIKIGIECQL-SAEELAQQIQQTF 363          
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan10g092200 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
BH096_ARATH2.003e-7847.97Transcription factor bHLH96 OS=Arabidopsis thalian... [more]
BH094_ARATH1.150e-7256.87Transcription factor bHLH94 OS=Arabidopsis thalian... [more]
BH057_ARATH2.591e-5445.67Transcription factor bHLH57 OS=Arabidopsis thalian... [more]
FAMA_ARATH7.825e-5145.50Transcription factor FAMA OS=Arabidopsis thaliana ... [more]
BH099_ARATH1.022e-5045.54Transcription factor bHLH99 OS=Arabidopsis thalian... [more]
BH071_ARATH2.476e-4945.73Transcription factor bHLH71 OS=Arabidopsis thalian... [more]
BH070_ARATH3.671e-4946.77Transcription factor bHLH70 OS=Arabidopsis thalian... [more]
BH067_ARATH1.770e-4546.53Transcription factor bHLH67 OS=Arabidopsis thalian... [more]
MUTE_ARATH1.301e-3038.02Transcription factor MUTE OS=Arabidopsis thaliana ... [more]
SPCH_ARATH4.143e-2063.49Transcription factor SPEECHLESS OS=Arabidopsis tha... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 132..183
e-value: 2.8E-9
score: 46.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 127..178
e-value: 4.9E-10
score: 39.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 126..177
score: 15.434
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 125..182
e-value: 2.71912E-13
score: 61.8463
IPR036638Helix-loop-helix DNA-binding domain superfamilyGENE3D4.10.280.10coord: 115..178
e-value: 2.2E-11
score: 45.4
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 126..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..105

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g092200; organism=Vigna angularis; type=mRNA; length=1208bp
aTGGCACTGGAAGCAGTGGTGTTTTCACAATCACAAGACCCATTTGGTGG
TTACGGATCAGTGAAGGACTTCTACAACTGCACTTTCTTGGCTGCTACTT
CACCTAACTGGGGGGACTATGAAcacatcaacatcaacatccacaaagaa
gaagaacaaggtTCCATCTCTACTTTTCTCGATAATAGTAACAACCAACC
AGACAATTACCCTTATGGAGGAGATTGGACCAGCTCCTCATCCTCTATCT
TACCCCACTTGAATGATCTTCAAGAAGCCACAGACCCCAGTAACGCCACT
CACAGCTTGGATACCTTAACCACTCGTCCCAAGAGGCGCAGAGCCAAAAG
CAGAAAGAACAAGGAAGAAATTGAGAACCAAAGAATGACTCACATTGCTG
TCGAGCGCAATAGAAGAAAGCAGATGAATGAGTATCTTTCTGTTCTTCGC
TCTCTCATGCCGGACTCTTATATCCAAAGGGTACTTCTCTCCTCTTCCTT
TTTTTGTTCTTACCTATTTGTTTCTTTACTTGGTTCCttcgaaaataaaa
attttgtttgttttgttttgtttgtttgtttggtcTGGTTGGCCATTGAA
GGGTGATCAAGCTTCTATAATTGGAGGTGCTATTAACTTTGTCAAGGAGC
TTGAACAGAGGCTGCATTTTCTTGGTGCTCAGAAAGAAGGAGAGCGGAAA
TCTGATGCTGGTGGTGCAACGAACATGCCCTTTTCTGAGTTCTTCGCCTT
TCCGCAGTATTCAAcaagtggtggtggtggtggctctGATAATTCTGCAA
CCGTAGGTGAAGACGTGGGTGAAGTTAAGTCTGGCATTGCTGACATAGAA
GTGACAATGGTGGAAAGCCATGCAAATCTCAAAATAAGATCCAAGAAGCG
CCCCAAGCAACTCTTGAAGCTGGTCTCTGGTTTGCATACTATGCGCCTCA
CAATCTTGCACCTAAATGTTACCACCACCGGTGAAATTGTACTCTACTCT
CTAAGTGTTAAGGTTTGTCTTTATTGGTGCCTTAAACTTGagatattttt
agttaattgttttcttctgGAAAGTGAAAATGTGCtgagttttttgtttt
gtttttttgcagGTAGAAGATGATTGCAAGTTGGGATCCGTTGATGATAT
TGCTGAAGCTGTGTACCAGACGCTGGATAGGATTCAGCAAGAGGCAGTGT
TGAATTAA
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protein sequence of LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1

>LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=328bp
MALEAVVFSQSQDPFGGYGSVKDFYNCTFLAATSPNWGDYEHININIHKE
EEQGSISTFLDNSNNQPDNYPYGGDWTSSSSSILPHLNDLQEATDPSNAT
HSLDTLTTRPKRRRAKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLR
SLMPDSYIQRGDQASIIGGAINFVKELEQRLHFLGAQKEGERKSDAGGAT
NMPFSEFFAFPQYSTSGGGGGSDNSATVGEDVGEVKSGIADIEVTMVESH
ANLKIRSKKRPKQLLKLVSGLHTMRLTILHLNVTTTGEIVLYSLSVKVED
DCKLGSVDDIAEAVYQTLDRIQQEAVLN
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mRNA from alignment at Chr_10-CM003380.1:11309795..11311002+

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g092200; organism=Vigna angularis; type=mRNA; length=1208bp; location=Sequence derived from: Chr_10-CM003380.1:11309795..11311002+ (Vigna angularis
aTGGCACTGGAAGCAGTGGTGTTTTCACAATCACAAGACCCATTTGGTGG TTACGGATCAGTGAAGGACTTCTACAACTGCACTTTCTTGGCTGCTACTT CACCTAACTGGGGGGACTATGAAcacatcaacatcaacatccacaaagaa gaagaacaaggtTCCATCTCTACTTTTCTCGATAATAGTAACAACCAACC AGACAATTACCCTTATGGAGGAGATTGGACCAGCTCCTCATCCTCTATCT TACCCCACTTGAATGATCTTCAAGAAGCCACAGACCCCAGTAACGCCACT CACAGCTTGGATACCTTAACCACTCGTCCCAAGAGGCGCAGAGCCAAAAG CAGAAAGAACAAGGAAGAAATTGAGAACCAAAGAATGACTCACATTGCTG TCGAGCGCAATAGAAGAAAGCAGATGAATGAGTATCTTTCTGTTCTTCGC TCTCTCATGCCGGACTCTTATATCCAAAGGGTACTTCTCTCCTCTTCCTT TTTTTGTTCTTACCTATTTGTTTCTTTACTTGGTTCCttcgaaaataaaa attttgtttgttttgttttgtttgtttgtttggtcTGGTTGGCCATTGAA GGGTGATCAAGCTTCTATAATTGGAGGTGCTATTAACTTTGTCAAGGAGC TTGAACAGAGGCTGCATTTTCTTGGTGCTCAGAAAGAAGGAGAGCGGAAA TCTGATGCTGGTGGTGCAACGAACATGCCCTTTTCTGAGTTCTTCGCCTT TCCGCAGTATTCAAcaagtggtggtggtggtggctctGATAATTCTGCAA CCGTAGGTGAAGACGTGGGTGAAGTTAAGTCTGGCATTGCTGACATAGAA GTGACAATGGTGGAAAGCCATGCAAATCTCAAAATAAGATCCAAGAAGCG CCCCAAGCAACTCTTGAAGCTGGTCTCTGGTTTGCATACTATGCGCCTCA CAATCTTGCACCTAAATGTTACCACCACCGGTGAAATTGTACTCTACTCT CTAAGTGTTAAGGTTTGTCTTTATTGGTGCCTTAAACTTGagatattttt agttaattgttttcttctgGAAAGTGAAAATGTGCtgagttttttgtttt gtttttttgcagGTAGAAGATGATTGCAAGTTGGGATCCGTTGATGATAT TGCTGAAGCTGTGTACCAGACGCTGGATAGGATTCAGCAAGAGGCAGTGT TGAATTAA
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Coding sequence (CDS) from alignment at Chr_10-CM003380.1:11309795..11311002+

>LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g092200_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g092200; organism=Vigna angularis; type=CDS; length=987bp; location=Sequence derived from: Chr_10-CM003380.1:11309795..11311002+ (Vigna angularis
aTGGCACTGGAAGCAGTGGTGTTTTCACAATCACAAGACCCATTTGGTGG
TTACGGATCAGTGAAGGACTTCTACAACTGCACTTTCTTGGCTGCTACTT
CACCTAACTGGGGGGACTATGAAcacatcaacatcaacatccacaaagaa
gaagaacaaggtTCCATCTCTACTTTTCTCGATAATAGTAACAACCAACC
AGACAATTACCCTTATGGAGGAGATTGGACCAGCTCCTCATCCTCTATCT
TACCCCACTTGAATGATCTTCAAGAAGCCACAGACCCCAGTAACGCCACT
CACAGCTTGGATACCTTAACCACTCGTCCCAAGAGGCGCAGAGCCAAAAG
CAGAAAGAACAAGGAAGAAATTGAGAACCAAAGAATGACTCACATTGCTG
TCGAGCGCAATAGAAGAAAGCAGATGAATGAGTATCTTTCTGTTCTTCGC
TCTCTCATGCCGGACTCTTATATCCAAAGGGGTGATCAAGCTTCTATAAT
TGGAGGTGCTATTAACTTTGTCAAGGAGCTTGAACAGAGGCTGCATTTTC
TTGGTGCTCAGAAAGAAGGAGAGCGGAAATCTGATGCTGGTGGTGCAACG
AACATGCCCTTTTCTGAGTTCTTCGCCTTTCCGCAGTATTCAAcaagtgg
tggtggtggtggctctGATAATTCTGCAACCGTAGGTGAAGACGTGGGTG
AAGTTAAGTCTGGCATTGCTGACATAGAAGTGACAATGGTGGAAAGCCAT
GCAAATCTCAAAATAAGATCCAAGAAGCGCCCCAAGCAACTCTTGAAGCT
GGTCTCTGGTTTGCATACTATGCGCCTCACAATCTTGCACCTAAATGTTA
CCACCACCGGTGAAATTGTACTCTACTCTCTAAGTGTTAAGGTAGAAGAT
GATTGCAAGTTGGGATCCGTTGATGATATTGCTGAAGCTGTGTACCAGAC
GCTGGATAGGATTCAGCAAGAGGCAGTGTTGAATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR036638HLH_DNA-bd_sf
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity