LR48_mrnaVigan10g095500

Transcript Overview


Name	LR48_mrnaVigan10g095500
Unique Name	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1
Type	mRNA
Organism	Vigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length	5454
Product	hypothetical protein

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_10-CM003380.1	supercontig	Chr_10-CM003380.1:11701613..11707066 -	Vigna angularis Jingnong 6 genome v1.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna angularis Jingnong 6 genome v1.1	2020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.1	2020-05-21
BLAST: V. angularis Jingnong 6 genome v1.1	2020-05-21

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ascaR261	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ascaR277	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
asasL099	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anasL0489	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0686	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0745	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0918	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0920	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL1230	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ascaiR342	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ascaiR353	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
asccR0434	Cajanus cajan Asha genome v1.0	Cajanus cajan
ascrR314	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
ascrR319	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
aspsR285	Pisum sativum Cameor genome v1a	Pisum sativum
aspsR296	Pisum sativum Cameor genome v1a	Pisum sativum
aspvR315	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
aspvR320	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
asvuR262	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
asvuR265	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
astifR292	Vicia faba cv. Tiffany genome v1.0	Vicia faba
astifR307	Vicia faba cv. Tiffany genome v1.0	Vicia faba
asvfhR302	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
asvfhR316	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
asvrvR195	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
asvrvR252	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
asvssR324	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvssR334	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvuaR241	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
asvuaR250	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
ascanR237	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
ascanR248	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Orthologs


Gene/Transcript	Assembly	Species
rna-TanjilR_31718	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Phvul.007G185100.7	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Cr_10113.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
rna-TanjilR_15554	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Psat6g147560.1	Pisum sativum Cameor genome v1a	Pisum sativum
rna-KK1_007109	Cajanus cajan Asha genome v1.0	Cajanus cajan
Ca_08547.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
rna-XM_022785214.1	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Vigun07g152800.7	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
rna-XM_004495722.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
evm.model.Chr07.1296	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
jg3153.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Ca_03735	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
LR48_mrnaVigan09g159800	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-LR48_Vigan10g095500	gene-LR48_Vigan10g095500_Va_Jingnong6_v1.1	Vigna angularis	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan10g095500	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-protein	Vigna angularis	polypeptide
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1	Vigna angularis	polypeptide

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-start_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11707064..11707066	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-start_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11707064..11707066	Vigna angularis	start_codon

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11706797..11707066	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11706797..11707066	Vigna angularis	exon
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11706562..11706699	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11706562..11706699	Vigna angularis	exon
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11706377..11706428	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11706377..11706428	Vigna angularis	exon
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11705043..11705122	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11705043..11705122	Vigna angularis	exon
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11704126..11704239	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11704126..11704239	Vigna angularis	exon
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11703898..11703978	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11703898..11703978	Vigna angularis	exon
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11702152..11702279	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11702152..11702279	Vigna angularis	exon
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11701613..11701691	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-exon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11701613..11701691	Vigna angularis	exon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11706700..11706796	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11706700..11706796	Vigna angularis	intron
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11706429..11706561	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11706429..11706561	Vigna angularis	intron
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11705123..11706376	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11705123..11706376	Vigna angularis	intron
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11704240..11705042	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11704240..11705042	Vigna angularis	intron
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11703979..11704125	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11703979..11704125	Vigna angularis	intron
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11702280..11703897	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11702280..11703897	Vigna angularis	intron
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11701692..11702151	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-intron-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11701692..11702151	Vigna angularis	intron

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS15804	CDS15804_Va_Jingnong6_v1.1	Vigna angularis	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-stop_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11701613..11701615	LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1-stop_codon-Chr_10-CM003380.1_Va_Jingnong6_v1.1-1589992784:11701613..11701615	Vigna angularis	stop_codon

Homology

[Close]

BLAST of LR48_mrnaVigan10g095500 vs. DB:Swiss
Match: CYSK_CITLA (Cysteine synthase OS=Citrullus lanatus OX=3654 PE=1 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 4.387e-93
Identity = 171/260 (65.77%), Postives = 205/260 (78.85%), Query Frame = 1

Query:    4 KSVVVEATSGNTGIGMAFVAILKGYKVIVAMPASVSLERKIVLLAFGAEVHLTDPAKGTDEVLRKAEEIVNNTPGSYMLRQIDNPANPKVHYESTGPEIWRDSGGKXXXXXXXXXXXXXXXXXXRFLKERNPNVKLYGVEPVESAVLSGGPPGDHLIQGIGNGIIPNVLDVNLLDEVIQLAAITTHSVKTNKVCKLQISSVEAIETAKLLALKEGLLMGISSGXXXXXXIKLGKRPENAGKLIV-----FARLLDSVTLF 768
            +SV++E TSGNTGIG+AF+A  KGY++I+ MPAS+SLER+ +L AFGAE+ LTDPA+G    ++KAEEI   TP SY+L+Q +NPANPK+HYE+TGPEIWR SGGK+DALV+G+GTGGT+TGAG++LKE+NPN+KLYGVEPVESA+LSGG PG H IQGIG G IP VLDVNLLDEVI                  Q+SS E+IETAKLLALKEGLL+GISSGAAAAAAI++ KRPENAGKLIV     F     S  LF
Sbjct:   70 ESVLIEPTSGNTGIGLAFIAAAKGYRLIICMPASMSLERRTILRAFGAELVLTDPARGMKGAVQKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWRGSGGKIDALVSGIGTGGTVTGAGKYLKEQNPNIKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPGVLDVNLLDEVI------------------QVSSEESIETAKLLALKEGLLVGISSGAAAAAAIRIAKRPENAGKLIVAVFPSFGERYLSTVLF 311

[Close]

BLAST of LR48_mrnaVigan10g095500 vs. DB:Swiss
Match: CYSD1_ARATH (Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1 OS=Arabidopsis thaliana OX=3702 GN=CYSD1 PE=1 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 5.888e-93
Identity = 164/244 (67.21%), Postives = 195/244 (79.92%), Query Frame = 1

Query:    4 KSVVVEATSGNTGIGMAFVAILKGYKVIVAMPASVSLERKIVLLAFGAEVHLTDPAKGTDEVLRKAEEIVNNTPGSYMLRQIDNPANPKVHYESTGPEIWRDSGGKXXXXXXXXXXXXXXXXXXRFLKERNPNVKLYGVEPVESAVLSGGPPGDHLIQGIGNGIIPNVLDVNLLDEVIQLAAITTHSVKTNKVCKLQISSVEAIETAKLLALKEGLLMGISSGXXXXXXIKLGKRPENAGKLIV 735
            KS ++EATSGNTGIG+AF+   KGYKV++ MP+S+SLERKI+LLA GAEVHLTDP+KG   ++ KAEEI +  P S ML Q  NP+NP+ HY +TGPEIWRDS G+VD LVAGVGTGGT++G+GRFLKE+N + K+YGVEP ESAV+SGG PG HLIQGIG G+IP+ LD N+LDEVI                  Q++SVEAIETAKLLALKEGLL+GISSGAAAAAAIK+ KRPENAGKLIV
Sbjct:   70 KSTLIEATSGNTGIGLAFIGAAKGYKVVLTMPSSMSLERKIILLALGAEVHLTDPSKGVQGIIDKAEEICSKNPDSIMLEQFKNPSNPQTHYRTTGPEIWRDSAGEVDILVAGVGTGGTLSGSGRFLKEKNKDFKVYGVEPTESAVISGGKPGTHLIQGIGAGLIPDNLDFNVLDEVI------------------QVTSVEAIETAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIV 295

[Close]

BLAST of LR48_mrnaVigan10g095500 vs. DB:Swiss
Match: CYSK_SPIOL (Cysteine synthase OS=Spinacia oleracea OX=3562 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.152e-91
Identity = 163/244 (66.80%), Postives = 198/244 (81.15%), Query Frame = 1

Query:    4 KSVVVEATSGNTGIGMAFVAILKGYKVIVAMPASVSLERKIVLLAFGAEVHLTDPAKGTDEVLRKAEEIVNNTPGSYMLRQIDNPANPKVHYESTGPEIWRDSGGKXXXXXXXXXXXXXXXXXXRFLKERNPNVKLYGVEPVESAVLSGGPPGDHLIQGIGNGIIPNVLDVNLLDEVIQLAAITTHSVKTNKVCKLQISSVEAIETAKLLALKEGLLMGISSGXXXXXXIKLGKRPENAGKLIV 735
            +SV++E TSGNTGIG+AF+A  KGYK+I+ MPAS+SLER+ +L AFGAE+ LTDPAKG    ++KAEEI + TP SY+L+Q +NPANPKVHYE+TGPEIW+ +GGK+D  V+G+GTGGTITGAG++LKE+NP+VKL G+EPVESAVLSGG PG H IQG+G G IP VLDVN++DEV+                  QISS E+IE AKLLALKEGLL+GISSGAAAAAAIK+ KRPENAGKLIV
Sbjct:   70 ESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRAFGAELILTDPAKGMKGAVQKAEEIRDKTPNSYILQQFENPANPKVHYETTGPEIWKGTGGKIDIFVSGIGTGGTITGAGKYLKEQNPDVKLIGLEPVESAVLSGGKPGPHKIQGLGAGFIPGVLDVNIIDEVV------------------QISSEESIEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIV 295

[Close]

BLAST of LR48_mrnaVigan10g095500 vs. DB:Swiss
Match: CYSK1_BRAJU (Cysteine synthase OS=Brassica juncea OX=3707 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.333e-90
Identity = 158/244 (64.75%), Postives = 196/244 (80.33%), Query Frame = 1

Query:    4 KSVVVEATSGNTGIGMAFVAILKGYKVIVAMPASVSLERKIVLLAFGAEVHLTDPAKGTDEVLRKAEEIVNNTPGSYMLRQIDNPANPKVHYESTGPEIWRDSGGKXXXXXXXXXXXXXXXXXXRFLKERNPNVKLYGVEPVESAVLSGGPPGDHLIQGIGNGIIPNVLDVNLLDEVIQLAAITTHSVKTNKVCKLQISSVEAIETAKLLALKEGLLMGISSGXXXXXXIKLGKRPENAGKLIV 735
            +SV++E TSGNTG+G+AF A  KGYK+I+ MPAS+S+ER+I+LLAFG E+ LTDPAKG    + KAEEI+  TP  YML+Q +NPANPK+HYE+TGPEIW+ + GK+D  V+G+GTGGTITGAG++LKE+NPNVKLYGVEP+ESA+LSGG PG H IQGIG G IP+VL+V+L+DEV+                  Q+SS E+I+ A+LLALKEGLL+GISSGAAAAAAIKL KRPENAGKL V
Sbjct:   67 ESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSVERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTDGKIDGFVSGIGTGGTITGAGKYLKEQNPNVKLYGVEPIESAILSGGKPGPHKIQGIGAGFIPSVLEVDLIDEVV------------------QVSSDESIDMARLLALKEGLLVGISSGAAAAAAIKLAKRPENAGKLFV 292

[Close]

BLAST of LR48_mrnaVigan10g095500 vs. DB:Swiss
Match: CYSKP_SOLTU (Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.464e-89
Identity = 159/243 (65.43%), Postives = 194/243 (79.84%), Query Frame = 1

Query:    4 KSVVVEATSGNTGIGMAFVAILKGYKVIVAMPASVSLERKIVLLAFGAEVHLTDPAKGTDEVLRKAEEIVNNTPGSYMLRQIDNPANPKVHYESTGPEIWRDSGGKXXXXXXXXXXXXXXXXXXRFLKERNPNVKLYGVEPVESAVLSGGPPGDHLIQGIGNGIIPNVLDVNLLDEVIQLAAITTHSVKTNKVCKLQISSVEAIETAKLLALKEGLLMGISSGXXXXXXIKLGKRPENAGKLI 732
            K+V+VE TSGNTGIG+AF+A  +GYK+I+ MPAS+SLER+++L AFGAE+ LTDPAKG    + KAEEI+NNTP +Y+L+Q DNPANPK+HYE+TGPEIW D+ GK+D LVAG+GTGGTITG GRFLKE+NPN+K+ GVEP ES VLSGG PG H IQGIG G IP  LD +++DEVI                  +ISS EA+ETA+ LAL+EGLL+GISSGAAA AAI++GKRPENAGKLI
Sbjct:  131 KTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDILVAGIGTGGTITGTGRFLKEQNPNIKIIGVEPTESNVLSGGKPGPHKIQGIGAGFIPGNLDQDVMDEVI------------------EISSDEAVETARTLALQEGLLVGISSGAAALAAIQVGKRPENAGKLI 355

[Close]

BLAST of LR48_mrnaVigan10g095500 vs. DB:Swiss
Match: CYSK2_BRAJU (Cysteine synthase OS=Brassica juncea OX=3707 PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.613e-89
Identity = 161/260 (61.92%), Postives = 198/260 (76.15%), Query Frame = 1

Query:    4 KSVVVEATSGNTGIGMAFVAILKGYKVIVAMPASVSLERKIVLLAFGAEVHLTDPAKGTDEVLRKAEEIVNNTPGSYMLRQIDNPANPKVHYESTGPEIWRDSGGKXXXXXXXXXXXXXXXXXXRFLKERNPNVKLYGVEPVESAVLSGGPPGDHLIQGIGNGIIPNVLDVNLLDEVIQLAAITTHSVKTNKVCKLQISSVEAIETAKLLALKEGLLMGISSGXXXXXXIKLGKRPENAGKLIV-----FARLLDSVTLF 768
            +SV++E TSGNTG+G+AF A  KGYK+I+ MPAS+S+ER+I+LLAFG E+ LTDPAKG    + KAEEI+  TP  YML+Q +NPANPK+HYE+TGPEIW+ + GK+D  ++G+GTGGTITGAG++LKE+NPNVKLYGVEPVESA+LSGG PG H IQGIG G IPNVL+ NL+DEV+                  Q+SS E+I+ A+LLA +EGLL+GISSGAAAAAAIKL KRPENAGKL V     F     S  LF
Sbjct:   69 ESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSIERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTEGKIDGFISGIGTGGTITGAGKYLKEQNPNVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPNVLETNLIDEVV------------------QVSSDESIDMARLLAREEGLLVGISSGAAAAAAIKLAKRPENAGKLFVAVFPSFGERYLSTVLF 310

[Close]

BLAST of LR48_mrnaVigan10g095500 vs. DB:Swiss
Match: CYSK_MAIZE (Cysteine synthase OS=Zea mays OX=4577 PE=1 SV=2)

HSP 1 Score: 271.552 bits (693), Expect = 7.623e-89
Identity = 160/243 (65.84%), Postives = 192/243 (79.01%), Query Frame = 1

Query:    7 SVVVEATSGNTGIGMAFVAILKGYKVIVAMPASVSLERKIVLLAFGAEVHLTDPAKGTDEVLRKAEEIVNNTPGSYMLRQIDNPANPKVHYESTGPEIWRDSGGKXXXXXXXXXXXXXXXXXXRFLKERNPNVKLYGVEPVESAVLSGGPPGDHLIQGIGNGIIPNVLDVNLLDEVIQLAAITTHSVKTNKVCKLQISSVEAIETAKLLALKEGLLMGISSGXXXXXXIKLGKRPENAGKLIV 735
            SV++E TSGNTGIG+AF+A  KGYK+ + MPAS+S+ER+I+L AFGAE+ LTDP  G    ++KAEEI   TP SY+L+Q +NPANPK+HYE+TGPEIW+ + GK+D LV+G+GTGGTITG GR+L+E+NPNVKLYGVEPVESAVL+GG PG H IQGIG G IP VLDV+LLDE                   LQ+SS EAIETAK LALKEGLL+GISSGAAAAAA++L KRPENAGKL V
Sbjct:   71 SVLIEPTSGNTGIGLAFMAAAKGYKLTLTMPASMSMERRIILKAFGAELVLTDPLLGMKGAVKKAEEIQAKTPNSYILQQFENPANPKIHYETTGPEIWKATAGKIDGLVSGIGTGGTITGTGRYLREQNPNVKLYGVEPVESAVLNGGKPGPHKIQGIGAGFIPGVLDVDLLDET------------------LQVSSDEAIETAKALALKEGLLVGISSGAAAAAAVRLAKRPENAGKLFV 295

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BLAST of LR48_mrnaVigan10g095500 vs. DB:Swiss
Match: CYSK1_ARATH (Cysteine synthase 1 OS=Arabidopsis thaliana OX=3702 GN=OASA1 PE=1 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 1.247e-88
Identity = 157/244 (64.34%), Postives = 194/244 (79.51%), Query Frame = 1

Query:    4 KSVVVEATSGNTGIGMAFVAILKGYKVIVAMPASVSLERKIVLLAFGAEVHLTDPAKGTDEVLRKAEEIVNNTPGSYMLRQIDNPANPKVHYESTGPEIWRDSGGKXXXXXXXXXXXXXXXXXXRFLKERNPNVKLYGVEPVESAVLSGGPPGDHLIQGIGNGIIPNVLDVNLLDEVIQLAAITTHSVKTNKVCKLQISSVEAIETAKLLALKEGLLMGISSGXXXXXXIKLGKRPENAGKLIV 735
            +SV++E TSGNTG+G+AF A  KGYK+I+ MPAS+S ER+I+LLAFG E+ LTDPAKG    + KAEEI+  TP  YML+Q +NPANPK+HYE+TGPEIW+ +GGK+D  V+G+GTGGTITGAG++LKE+N NVKLYGVEPVESA+LSGG PG H IQGIG G IP+VL+V+L+DEV+                  Q+SS E+I+ A+ LALKEGLL+GISSGAAAAAAIKL +RPENAGKL V
Sbjct:   67 ESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAKTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPSVLNVDLIDEVV------------------QVSSDESIDMARQLALKEGLLVGISSGAAAAAAIKLAQRPENAGKLFV 292

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BLAST of LR48_mrnaVigan10g095500 vs. DB:Swiss
Match: CYSK_SOLTU (Cysteine synthase OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 1.722e-88
Identity = 159/244 (65.16%), Postives = 196/244 (80.33%), Query Frame = 1

Query:    4 KSVVVEATSGNTGIGMAFVAILKGYKVIVAMPASVSLERKIVLLAFGAEVHLTDPAKGTDEVLRKAEEIVNNTPGSYMLRQIDNPANPKVHYESTGPEIWRDSGGKXXXXXXXXXXXXXXXXXXRFLKERNPNVKLYGVEPVESAVLSGGPPGDHLIQGIGNGIIPNVLDVNLLDEVIQLAAITTHSVKTNKVCKLQISSVEAIETAKLLALKEGLLMGISSGXXXXXXIKLGKRPENAGKLIV 735
            +SV++E TSGNTG+G+AF+A  KGYK+I+ MP+S+SLER+I+L  F +E+ LTDPAKG    + KAEEI   TP SY+L+Q +NPANPK+HYE+TGPEIW+ S GKVDAL +G+GTGGTITG+G++L+E+NPNVKLYGVEPVESA+LSGG PG H IQGIG G IP VL+VNL+D+V+                  Q+SS E+IE AKLLALKEGLL+GISSGAAAAAAIK+ KRPENAGKLIV
Sbjct:   70 ESVLIEPTSGNTGVGLAFMAAAKGYKLIITMPSSMSLERRIILRGFRSELVLTDPAKGMKGAISKAEEIKAKTPNSYILQQFENPANPKIHYETTGPEIWKGSNGKVDALASGIGTGGTITGSGKYLREQNPNVKLYGVEPVESAILSGGKPGPHKIQGIGAGFIPGVLEVNLIDDVV------------------QVSSEESIEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIV 295

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BLAST of LR48_mrnaVigan10g095500 vs. DB:Swiss
Match: CYSKM_ARATH (Cysteine synthase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OASC PE=1 SV=3)

HSP 1 Score: 268.855 bits (686), Expect = 2.427e-86
Identity = 157/243 (64.61%), Postives = 189/243 (77.78%), Query Frame = 1

Query:    4 KSVVVEATSGNTGIGMAFVAILKGYKVIVAMPASVSLERKIVLLAFGAEVHLTDPAKGTDEVLRKAEEIVNNTPGSYMLRQIDNPANPKVHYESTGPEIWRDSGGKXXXXXXXXXXXXXXXXXXRFLKERNPNVKLYGVEPVESAVLSGGPPGDHLIQGIGNGIIPNVLDVNLLDEVIQLAAITTHSVKTNKVCKLQISSVEAIETAKLLALKEGLLMGISSGXXXXXXIKLGKRPENAGKLI 732
            KSV+VE TSGNTGIG+AF+A  +GY++I+ MPAS+S+ER+++L AFGAE+ LTDPAKG    ++KAEEI+ NTP +YML+Q DNPANPK+HYE+TGPEIW D+ GKVD  VAG+GTGGTITG GRF+KE+NP  ++ GVEP ES +LSGG PG H IQGIG G IP  LD  ++DEVI                   ISS EAIETAK LALKEGL++GISSGAAAAAAIK+ KRPENAGKLI
Sbjct:  175 KSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTESDILSGGKPGPHKIQGIGAGFIPKNLDQKIMDEVI------------------AISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLI 399

The following BLAST results are available for this feature:

BLAST of LR48_mrnaVigan10g095500 vs. DB:Swiss

BLAST of LR48_mrnaVigan10g095500 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
CYSK_CITLA	4.387e-93	65.77	Cysteine synthase OS=Citrullus lanatus OX=3654 PE=...	[more]
CYSD1_ARATH	5.888e-93	67.21	Bifunctional L-3-cyanoalanine synthase/cysteine sy...	[more]
CYSK_SPIOL	2.152e-91	66.80	Cysteine synthase OS=Spinacia oleracea OX=3562 PE=...	[more]
CYSK1_BRAJU	2.333e-90	64.75	Cysteine synthase OS=Brassica juncea OX=3707 PE=2 ...	[more]
CYSKP_SOLTU	1.464e-89	65.43	Cysteine synthase, chloroplastic/chromoplastic OS=...	[more]
CYSK2_BRAJU	1.613e-89	61.92	Cysteine synthase OS=Brassica juncea OX=3707 PE=2 ...	[more]
CYSK_MAIZE	7.623e-89	65.84	Cysteine synthase OS=Zea mays OX=4577 PE=1 SV=2	[more]
CYSK1_ARATH	1.247e-88	64.34	Cysteine synthase 1 OS=Arabidopsis thaliana OX=370...	[more]
CYSK_SOLTU	1.722e-88	65.16	Cysteine synthase OS=Solanum tuberosum OX=4113 PE=...	[more]
CYSKM_ARATH	2.427e-86	64.61	Cysteine synthase, mitochondrial OS=Arabidopsis th...	[more]

InterPro

Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 85..246 e-value: 4.1E-82 score: 277.5
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 3..84 e-value: 4.1E-82 score: 277.5
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 4..246
IPR001926	Pyridoxal-phosphate dependent enzyme	PFAM	PF00291	PALP	coord: 4..245 e-value: 1.8E-47 score: 162.0
None	No IPR available	CDD	cd01561	CBS_like	coord: 3..245 e-value: 8.92391E-93 score: 275.547

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_10-CM003380.1:11701613..11707066-
coding sequence from alignment at Chr_10-CM003380.1:11701613..11707066-

mRNA sequence

>LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g095500; organism=Vigna angularis; type=mRNA; length=5454bp
ATGAAGAGTGTTGTTGTGGAGGCTACGAGTGGGAACACCGGCATTGGAAT
GGCATTCGTAGCAATTTTGAAGGGCTACAAGGTAATAGTTGCAATGCCAG
CTTCGGTGAGTCTGGAGAGAAAAATTGTGCTTCTAGCCTTCGGAGCTGAG
GTGCATCTCACAGACCCTGCCAAAGGAACCGATGAAGTTCTTAGGAAGGC
AGAGGAGATAGTGAATAACACCCCCGGCAGTTACATGCTGCGCCAGATTG
ATAATCCTGCCAATCCAAAAGTACAATCTATTCCATATTTGATTTGAGCC
TGTTATTAGTATTGCTGCTGTTATTATTATTTGATCTGTGTATTGATGGT
GATATTCTGAATTATAGGTTCATTATGAGAGTACTGGGCCTGAGATATGG
AGAGACTCCGGTGGGAAAGTTGATGCTTTGGTTGCAGGGGTAGGAACAGG
GGGCACAATAACGGGTGCTGGCAGATTTCTCAAGGAGAGGAACCCCAATG
TCAAGGTGGATTTCTTTACCTATTTTACCTTACCCTCCATGATTTCAGTA
AAATAGGTATCGAGGAACCAAATCTTGCTTCTATGCTAACTTCACCTTTG
CATTGCTGTTCTGGTTTTGGTTTTGGTTTTGGTCTCAGTTGTACGGTGTA
GAACCAGTTGAAAGTGCAGTTCTTAGTGGAGGACCTCCAGGTAATTTTAC
CACTATACTTATGCCCTCATCCTTTTTTAATCTTTTCATTCAGTTGGTGT
TTATTCTACAAACAAAGCTAGTTATGACATTTAATTAAAAGACATATGGA
TTTTATTATAGTTTTAGTCATTGTTTTCATTGGTGGTTATAAAAAAACGA
AAACCTTTCAAATATAATTATAATAATCTATCAAAACATTCTGTAATATC
ATACACATTTATGTTGCCATTCAACTCAATCCAATTTACGCAAGCTTGAA
TTGGGTTGAATAGATTGGCAATCTGCCCAGTTAGAAATTAGGCTTTATTA
GGCTGAATCATCAAAATTTGATAAAAAAAAAAGTCAATAAAACAAATTGG
GTTAACCCACCAAATAAATAAGAAAATAAAAAATTAAAAGCTATACTATA
CATTAAAATGAAACAAACTCAAATAAATCATAATGATATTATGATAAATT
TTGCAGTACCTCTATTTTAAAACTAAAAAATAGAAAAATAAAATTTCCAT
CTAATGAGTCAACTACAATTTGTAAGATTTGTCTTGCCGCTCAATCTAAC
ACATTTAGATGAGTCAACTTGTTTAACACGTTGAATTGAACCTGTATTAA
CATTCATTCATAAAATATTAAAACTAAAAGCTAGTCCCCTAACATCAATA
AATCTAGCATTATAAGTCTTTGTGGGTTATAATATATATAGGATTTTTTT
TAATTCAAAGAGAAGAAAGTCAATCCAATGGATTGACGTAAATTGCCTTC
ATTGCTCAAACGGCATGTTGGATTTGGTTGAACCCAATTTAAACTGAATT
AAAAAATTTAATGCCACCCTATTAAAAAATATTTAATATTTTTTTATCCT
CATAAATGCTTAAATTATATTCTCGTTTCTCTTATTTTAAATACTGTTGT
CCTCTCCACTCCTCTTCTCTCTGTTATGCCAGATACTCGGTATGCTGGAG
GAAGAAAGTTGTCTGTATGTGCTCCGAACAGTGTTATTGTACTATATATA
TAAATATTCAAGTAGTATGGTAATTTAACACACCGTATTTGTGCAGTGAA
GGCGTTGAACCCATAATTTAGCTTAAGGTGAACTGGATTGGAAATTATGC
GCGAAATGTTTGTTATTAGTTGAATTGTAAACATTTTCATTCGGATGCAT
ACATATACTCTGAAAATTTGTTCTTTAAGCTTTAGCAAGACCTCAAACTA
CAATATGAGGCCGTTTACTGACTTTTCTATAAATTTTTACACAGGTGATC
ACCTAATCCAAGGGATTGGTAATGGTATCATTCCGAATGTACTGGATGTT
AATCTCCTAGATGAAGTCATCCAGGTAGATCACAACTCCCTTCATTTTGC
TGGGTCTCTCTCTGTCTATCTCTTAGCCTAAGTATAGCCTCTATTTGTTA
TTTCTGTTTTGCAGAAAATGTTCTCAAGCAATCTTAATATCTAGATTTTA
TGCAAATATATCTCAGTTACCAATAAATGGTTCATCTCTATGTCGAAAGT
TGAAAGAATATTTGCAGTGTGTGGATACCTTTTTCAACTATTTCAAATTT
GTTTTTTTAGGTTTTAAACTGACTGGTATTGTTTTTAGAGTATAGTTTCC
TGTGTCTGTGGATATATAATCATGCATGCGAAGAAAAAAAAAATAGTGTG
TACGAGGAAAAATCAGAAATGGTTTTTATTTTGTTACTTTTGTCTCATAA
CCTTAAGCCAAAAAGTGCAAGATCCAAGTTAAAGCAATATGAACTTATGG
AGCCATTCTTAATCATTTTTCTTTTAACTTTGATACTTAATGCTCTTCAA
TACGCTAGTTTTATACCGATTGTAACGAGCTTACTAGACCTCATGCATAC
TATCCCAATCTCACCCCACTAATCTTGTCCCGGTCATTTCAAAGTGAGAC
ATACTGATTCTGGAACTATGATTCATAAAACATGTTTATATTTTATAACA
ACATATGAGTTGATGATATGCGTGAAAAAATTTGAGAAGTATCACTGAAT
TGCTAGCAAAAGAAAAAATCCTCTCAGTCTTGTACATTTACAAGCGAAAG
AATCACAAGCTTTCCTGTTCTAGCTAAGACACAATGTTATGCAGTAGAAT
AAGCAATTTTACGTTATGTTTGCTTAGCTAGCTGCTATTACAACGCATTC
TGTCAAGACTAACAAGGTCTGTAAACTGCAGATATCAAGTGTAGAAGCAA
TAGAAACTGCTAAGCTGCTTGCTTTAAAAGAAGGTTTGTTGGTATGACAA
TGATAAATTGTGGCTCTTATTGATTTCACAGTACTTTCTATATGGATATT
CGTGTAAAATGCGAACTCTATACTTCTCTAATTCCAATTATTCAAATTAC
TAGTTCTCATGCTTATTATATTATTACTTCTTTTGCAGATGGGAATTTCA
TCAGGTGCCGCAGCAGCCGCTGCCATAAAATTGGGGAAGAGACCTGAAAA
TGCCGGAAAACTCATCGTTGTGAGTTTCTTGTCTTTGAAAACTTTCATTT
ATTTAACAGGAATTATGAGATTATTATATTCTAAAACTTCACCCAAAAAA
AGGATCGGTAATAAAGATGTCTGTGAAGAAACAGAATAGAAGAGAGGTGA
TGAGGAGTGAGAGGGCACTTGACCCTGAGAAAGTATGTAAAATTTTTTGG
CTTTTAGGAGTTATGGGAATGTGCCAACTCTGAAGAACATTTGCACTTCT
GATAATTTGGGATGAATCATGAATAATTCATTGCATTAACACTGAACTTG
TACGAGATATATATAAGAAGCATATTTTTTATAACTTGGAAGAAAGAATG
TTCTAATCGATAATGATAAATTAGGGTATTGTTGGTCTTTAGGGGAAGGC
TCCTCCCGTTGGGCAGATTTAGATCTTCTAGGCAGAGAATTTGTTGCATT
TTCCAGCATGTCCAATTGCCCTCCTCCAATTCCTCTCTGAAAACCCAACA
ATTGTTGTGAAAATTAAGATTACATGTGGAATCTTAAGTAAGTTTCTGTA
TGGAGATTTTGGAGGATAATTTTGGAACACAAAACACGTTTTCTCAAGAT
TATTGATGGGATTATCTAAATACTTTTTTTACCTGCTGCAGCTATAAAAG
TTTCATCTGCAATGTCAAATTTCTTACTGATAGGGTATAGGGTATTGGTG
AAGTCTTTCGTTAAGGTTGTCATATTGTCAGTAACTCTAAAGTCTAGTAT
CTAATAATGTTATACATTTATTCCAGAAGAAAATGAAAGCACAGTTGAGT
ATGCCAAAGAACACATACACGAAGGTTTCTCTAGTTTACTTAGGAAAACT
CTAATATGTTTTTCTACTAGTCTACTTCCTCTTAGTTGAGAAGGACAAAT
TTGTTTTCTTCACCTGTTTCTGAAACATAGGTCTGTTTTCCCAATCATGG
GAGGCCACTTTTGTGTCCCCATTGTTGATCTCAACATGTAGGCTTTAGAA
AAAGTCTGTACCACTTCTCCCAAGTATAGCAGGGCTTATTGTGGTAGGTA
AAAGTATAACATGGACTATCACCCTTCTTGTCCACATTTGTCAATCTTCC
TTTCTTCTATTTCATGACTATGGCCAAAGTCAAATTTCATAGCTAAGGTT
TTCAGTTGAGTGTTGGAAAATCTAACATTTGACTCCTACTTTCTTCACTT
AGTACAACAGTCACTGCTTCGTTGAAGGTTTTCCGCTCTTGTTTCCTTAA
GTTTTTTATCCTAACTTGATCAAATTCAGAATTGAAGCCAACGAGGAAAC
CTTGTTCATGGACTCTGTGTTGCCCAAAAAACCTTCTTAATAACCGCTGC
ATCGTTAGAACTTTTGGTCTTTAATGGTCCAATTCCATCCATAAGGACTC
AAGCTGGTCATACTAAGGTAATCCCTTGGTCTGCTGCCAAAGTCTTTACG
TTTTCTTCGTATGGAAGTGTCACTGCTTTTTAGCATTGATTCTTCCACTT
CCACGTGGTAAACTTGGGACCCTTTTATTAGGTTTTTCTTCTGTTTGGTG
ATTCAACTTTTCCTTTCCTTTCAGTATTGTGGCCTACTTCGGATAATTGT
TTTCATTCAACTTATATGTTGAATGAATGTTATGCAGTTCGCCAGGTTGT
TGGATTCAGTCACCCTGTTTCTGGGGTGGGTTGGATTCACAAATCCTCCT
TCCCTTAGGGAGGGACAGAAATGCAAGATAAACACAAGAAAACGTAGCTG
TGCAGACAAGGGACTGTGACTTAAAAGATAAACACCGGAAGAAGAAAAAA
AAAAAGACTCTTCAAACAGCTAAAGAAAACCTCCAAAATGGGGAAGCTCT
GACACCATGTGGAACATAAAGGTTCAATGAATTGATTTCATGAGATTTTC
CTAATTCCTAATCATGCAAGTCTGAATAGATTACAAAATATTACAGAAAT
ATCTTATCACACGATTTTCCTAATTCCTAATCATGCAAACCTGTATAGAT
TACAAAATAGTACAGAAATTTCCCAAAATAACATACGATTTCCCACGTGC
ACCGACGTGGTTTATGGCCTGTAGTTTGGACGATAGTCGGCTCATTTATT
AAAACTATAGATCAAGATAAGGATGTTTGATATTGTGCGAATATGTGATT
ATTCTTCCTTGAGGTAAAAGAGATTTTTACTTGTTATAAATCATGTCATC
TGACATTTGCTGCGATGCTGTGCAGGTGGTATTTCCCAGTTATGGAGAGC
GTTATTTGTCATCACCATTGTTCGAATCCATTAGGCATGAAGCTGAACAA
ATGA

protein sequence of LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1

>LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=313bp
MKSVVVEATSGNTGIGMAFVAILKGYKVIVAMPASVSLERKIVLLAFGAE
VHLTDPAKGTDEVLRKAEEIVNNTPGSYMLRQIDNPANPKVHYESTGPEI
WRDSGGKVDALVAGVGTGGTITGAGRFLKERNPNVKLYGVEPVESAVLSG
GPPGDHLIQGIGNGIIPNVLDVNLLDEVIQLAAITTHSVKTNKVCKLQIS
SVEAIETAKLLALKEGLLMGISSGAAAAAAIKLGKRPENAGKLIVFARLL
DSVTLFLGWVGFTNPPSLREGQKCKINTRKRSCADKGLWYFPVMESVICH
HHCSNPLGMKLNK

mRNA from alignment at Chr_10-CM003380.1:11701613..11707066-

Legend: polypeptidestart_codonexonCDSintronstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g095500; organism=Vigna angularis; type=mRNA; length=5454bp; location=Sequence derived from: Chr_10-CM003380.1:11701613..11707066- (Vigna angularis
ATGAAGAGTGTTGTTGTGGAGGCTACGAGTGGGAACACCGGCATTGGAAT
GGCATTCGTAGCAATTTTGAAGGGCTACAAGGTAATAGTTGCAATGCCAG
CTTCGGTGAGTCTGGAGAGAAAAATTGTGCTTCTAGCCTTCGGAGCTGAG
GTGCATCTCACAGACCCTGCCAAAGGAACCGATGAAGTTCTTAGGAAGGC
AGAGGAGATAGTGAATAACACCCCCGGCAGTTACATGCTGCGCCAGATTG
ATAATCCTGCCAATCCAAAAGTACAATCTATTCCATATTTGATTTGAGCC
TGTTATTAGTATTGCTGCTGTTATTATTATTTGATCTGTGTATTGATGGT
GATATTCTGAATTATAGGTTCATTATGAGAGTACTGGGCCTGAGATATGG
AGAGACTCCGGTGGGAAAGTTGATGCTTTGGTTGCAGGGGTAGGAACAGG
GGGCACAATAACGGGTGCTGGCAGATTTCTCAAGGAGAGGAACCCCAATG
TCAAGGTGGATTTCTTTACCTATTTTACCTTACCCTCCATGATTTCAGTA
AAATAGGTATCGAGGAACCAAATCTTGCTTCTATGCTAACTTCACCTTTG
CATTGCTGTTCTGGTTTTGGTTTTGGTTTTGGTCTCAGTTGTACGGTGTA
GAACCAGTTGAAAGTGCAGTTCTTAGTGGAGGACCTCCAGGTAATTTTAC
CACTATACTTATGCCCTCATCCTTTTTTAATCTTTTCATTCAGTTGGTGT
TTATTCTACAAACAAAGCTAGTTATGACATTTAATTAAAAGACATATGGA
TTTTATTATAGTTTTAGTCATTGTTTTCATTGGTGGTTATAAAAAAACGA
AAACCTTTCAAATATAATTATAATAATCTATCAAAACATTCTGTAATATC
ATACACATTTATGTTGCCATTCAACTCAATCCAATTTACGCAAGCTTGAA
TTGGGTTGAATAGATTGGCAATCTGCCCAGTTAGAAATTAGGCTTTATTA
GGCTGAATCATCAAAATTTGATAAAAAAAAAAGTCAATAAAACAAATTGG
GTTAACCCACCAAATAAATAAGAAAATAAAAAATTAAAAGCTATACTATA
CATTAAAATGAAACAAACTCAAATAAATCATAATGATATTATGATAAATT
TTGCAGTACCTCTATTTTAAAACTAAAAAATAGAAAAATAAAATTTCCAT
CTAATGAGTCAACTACAATTTGTAAGATTTGTCTTGCCGCTCAATCTAAC
ACATTTAGATGAGTCAACTTGTTTAACACGTTGAATTGAACCTGTATTAA
CATTCATTCATAAAATATTAAAACTAAAAGCTAGTCCCCTAACATCAATA
AATCTAGCATTATAAGTCTTTGTGGGTTATAATATATATAGGATTTTTTT
TAATTCAAAGAGAAGAAAGTCAATCCAATGGATTGACGTAAATTGCCTTC
ATTGCTCAAACGGCATGTTGGATTTGGTTGAACCCAATTTAAACTGAATT
AAAAAATTTAATGCCACCCTATTAAAAAATATTTAATATTTTTTTATCCT
CATAAATGCTTAAATTATATTCTCGTTTCTCTTATTTTAAATACTGTTGT
CCTCTCCACTCCTCTTCTCTCTGTTATGCCAGATACTCGGTATGCTGGAG
GAAGAAAGTTGTCTGTATGTGCTCCGAACAGTGTTATTGTACTATATATA
TAAATATTCAAGTAGTATGGTAATTTAACACACCGTATTTGTGCAGTGAA
GGCGTTGAACCCATAATTTAGCTTAAGGTGAACTGGATTGGAAATTATGC
GCGAAATGTTTGTTATTAGTTGAATTGTAAACATTTTCATTCGGATGCAT
ACATATACTCTGAAAATTTGTTCTTTAAGCTTTAGCAAGACCTCAAACTA
CAATATGAGGCCGTTTACTGACTTTTCTATAAATTTTTACACAGGTGATC
ACCTAATCCAAGGGATTGGTAATGGTATCATTCCGAATGTACTGGATGTT
AATCTCCTAGATGAAGTCATCCAGGTAGATCACAACTCCCTTCATTTTGC
TGGGTCTCTCTCTGTCTATCTCTTAGCCTAAGTATAGCCTCTATTTGTTA
TTTCTGTTTTGCAGAAAATGTTCTCAAGCAATCTTAATATCTAGATTTTA
TGCAAATATATCTCAGTTACCAATAAATGGTTCATCTCTATGTCGAAAGT
TGAAAGAATATTTGCAGTGTGTGGATACCTTTTTCAACTATTTCAAATTT
GTTTTTTTAGGTTTTAAACTGACTGGTATTGTTTTTAGAGTATAGTTTCC
TGTGTCTGTGGATATATAATCATGCATGCGAAGAAAAAAAAAATAGTGTG
TACGAGGAAAAATCAGAAATGGTTTTTATTTTGTTACTTTTGTCTCATAA
CCTTAAGCCAAAAAGTGCAAGATCCAAGTTAAAGCAATATGAACTTATGG
AGCCATTCTTAATCATTTTTCTTTTAACTTTGATACTTAATGCTCTTCAA
TACGCTAGTTTTATACCGATTGTAACGAGCTTACTAGACCTCATGCATAC
TATCCCAATCTCACCCCACTAATCTTGTCCCGGTCATTTCAAAGTGAGAC
ATACTGATTCTGGAACTATGATTCATAAAACATGTTTATATTTTATAACA
ACATATGAGTTGATGATATGCGTGAAAAAATTTGAGAAGTATCACTGAAT
TGCTAGCAAAAGAAAAAATCCTCTCAGTCTTGTACATTTACAAGCGAAAG
AATCACAAGCTTTCCTGTTCTAGCTAAGACACAATGTTATGCAGTAGAAT
AAGCAATTTTACGTTATGTTTGCTTAGCTAGCTGCTATTACAACGCATTC
TGTCAAGACTAACAAGGTCTGTAAACTGCAGATATCAAGTGTAGAAGCAA
TAGAAACTGCTAAGCTGCTTGCTTTAAAAGAAGGTTTGTTGGTATGACAA
TGATAAATTGTGGCTCTTATTGATTTCACAGTACTTTCTATATGGATATT
CGTGTAAAATGCGAACTCTATACTTCTCTAATTCCAATTATTCAAATTAC
TAGTTCTCATGCTTATTATATTATTACTTCTTTTGCAGATGGGAATTTCA
TCAGGTGCCGCAGCAGCCGCTGCCATAAAATTGGGGAAGAGACCTGAAAA
TGCCGGAAAACTCATCGTTGTGAGTTTCTTGTCTTTGAAAACTTTCATTT
ATTTAACAGGAATTATGAGATTATTATATTCTAAAACTTCACCCAAAAAA
AGGATCGGTAATAAAGATGTCTGTGAAGAAACAGAATAGAAGAGAGGTGA
TGAGGAGTGAGAGGGCACTTGACCCTGAGAAAGTATGTAAAATTTTTTGG
CTTTTAGGAGTTATGGGAATGTGCCAACTCTGAAGAACATTTGCACTTCT
GATAATTTGGGATGAATCATGAATAATTCATTGCATTAACACTGAACTTG
TACGAGATATATATAAGAAGCATATTTTTTATAACTTGGAAGAAAGAATG
TTCTAATCGATAATGATAAATTAGGGTATTGTTGGTCTTTAGGGGAAGGC
TCCTCCCGTTGGGCAGATTTAGATCTTCTAGGCAGAGAATTTGTTGCATT
TTCCAGCATGTCCAATTGCCCTCCTCCAATTCCTCTCTGAAAACCCAACA
ATTGTTGTGAAAATTAAGATTACATGTGGAATCTTAAGTAAGTTTCTGTA
TGGAGATTTTGGAGGATAATTTTGGAACACAAAACACGTTTTCTCAAGAT
TATTGATGGGATTATCTAAATACTTTTTTTACCTGCTGCAGCTATAAAAG
TTTCATCTGCAATGTCAAATTTCTTACTGATAGGGTATAGGGTATTGGTG
AAGTCTTTCGTTAAGGTTGTCATATTGTCAGTAACTCTAAAGTCTAGTAT
CTAATAATGTTATACATTTATTCCAGAAGAAAATGAAAGCACAGTTGAGT
ATGCCAAAGAACACATACACGAAGGTTTCTCTAGTTTACTTAGGAAAACT
CTAATATGTTTTTCTACTAGTCTACTTCCTCTTAGTTGAGAAGGACAAAT
TTGTTTTCTTCACCTGTTTCTGAAACATAGGTCTGTTTTCCCAATCATGG
GAGGCCACTTTTGTGTCCCCATTGTTGATCTCAACATGTAGGCTTTAGAA
AAAGTCTGTACCACTTCTCCCAAGTATAGCAGGGCTTATTGTGGTAGGTA
AAAGTATAACATGGACTATCACCCTTCTTGTCCACATTTGTCAATCTTCC
TTTCTTCTATTTCATGACTATGGCCAAAGTCAAATTTCATAGCTAAGGTT
TTCAGTTGAGTGTTGGAAAATCTAACATTTGACTCCTACTTTCTTCACTT
AGTACAACAGTCACTGCTTCGTTGAAGGTTTTCCGCTCTTGTTTCCTTAA
GTTTTTTATCCTAACTTGATCAAATTCAGAATTGAAGCCAACGAGGAAAC
CTTGTTCATGGACTCTGTGTTGCCCAAAAAACCTTCTTAATAACCGCTGC
ATCGTTAGAACTTTTGGTCTTTAATGGTCCAATTCCATCCATAAGGACTC
AAGCTGGTCATACTAAGGTAATCCCTTGGTCTGCTGCCAAAGTCTTTACG
TTTTCTTCGTATGGAAGTGTCACTGCTTTTTAGCATTGATTCTTCCACTT
CCACGTGGTAAACTTGGGACCCTTTTATTAGGTTTTTCTTCTGTTTGGTG
ATTCAACTTTTCCTTTCCTTTCAGTATTGTGGCCTACTTCGGATAATTGT
TTTCATTCAACTTATATGTTGAATGAATGTTATGCAGTTCGCCAGGTTGT
TGGATTCAGTCACCCTGTTTCTGGGGTGGGTTGGATTCACAAATCCTCCT
TCCCTTAGGGAGGGACAGAAATGCAAGATAAACACAAGAAAACGTAGCTG
TGCAGACAAGGGACTGTGACTTAAAAGATAAACACCGGAAGAAGAAAAAA
AAAAAGACTCTTCAAACAGCTAAAGAAAACCTCCAAAATGGGGAAGCTCT
GACACCATGTGGAACATAAAGGTTCAATGAATTGATTTCATGAGATTTTC
CTAATTCCTAATCATGCAAGTCTGAATAGATTACAAAATATTACAGAAAT
ATCTTATCACACGATTTTCCTAATTCCTAATCATGCAAACCTGTATAGAT
TACAAAATAGTACAGAAATTTCCCAAAATAACATACGATTTCCCACGTGC
ACCGACGTGGTTTATGGCCTGTAGTTTGGACGATAGTCGGCTCATTTATT
AAAACTATAGATCAAGATAAGGATGTTTGATATTGTGCGAATATGTGATT
ATTCTTCCTTGAGGTAAAAGAGATTTTTACTTGTTATAAATCATGTCATC
TGACATTTGCTGCGATGCTGTGCAGGTGGTATTTCCCAGTTATGGAGAGC
GTTATTTGTCATCACCATTGTTCGAATCCATTAGGCATGAAGCTGAACAA
ATGA

Coding sequence (CDS) from alignment at Chr_10-CM003380.1:11701613..11707066-

>LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan10g095500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan10g095500; organism=Vigna angularis; type=CDS; length=942bp; location=Sequence derived from: Chr_10-CM003380.1:11701613..11707066- (Vigna angularis
ATGAAGAGTGTTGTTGTGGAGGCTACGAGTGGGAACACCGGCATTGGAAT
GGCATTCGTAGCAATTTTGAAGGGCTACAAGGTAATAGTTGCAATGCCAG
CTTCGGTGAGTCTGGAGAGAAAAATTGTGCTTCTAGCCTTCGGAGCTGAG
GTGCATCTCACAGACCCTGCCAAAGGAACCGATGAAGTTCTTAGGAAGGC
AGAGGAGATAGTGAATAACACCCCCGGCAGTTACATGCTGCGCCAGATTG
ATAATCCTGCCAATCCAAAAGTTCATTATGAGAGTACTGGGCCTGAGATA
TGGAGAGACTCCGGTGGGAAAGTTGATGCTTTGGTTGCAGGGGTAGGAAC
AGGGGGCACAATAACGGGTGCTGGCAGATTTCTCAAGGAGAGGAACCCCA
ATGTCAAGTTGTACGGTGTAGAACCAGTTGAAAGTGCAGTTCTTAGTGGA
GGACCTCCAGGTGATCACCTAATCCAAGGGATTGGTAATGGTATCATTCC
GAATGTACTGGATGTTAATCTCCTAGATGAAGTCATCCAGCTAGCTGCTA
TTACAACGCATTCTGTCAAGACTAACAAGGTCTGTAAACTGCAGATATCA
AGTGTAGAAGCAATAGAAACTGCTAAGCTGCTTGCTTTAAAAGAAGGTTT
GTTGATGGGAATTTCATCAGGTGCCGCAGCAGCCGCTGCCATAAAATTGG
GGAAGAGACCTGAAAATGCCGGAAAACTCATCGTTTTCGCCAGGTTGTTG
GATTCAGTCACCCTGTTTCTGGGGTGGGTTGGATTCACAAATCCTCCTTC
CCTTAGGGAGGGACAGAAATGCAAGATAAACACAAGAAAACGTAGCTGTG
CAGACAAGGGACTGTGGTATTTCCCAGTTATGGAGAGCGTTATTTGTCAT
CACCATTGTTCGAATCCATTAGGCATGAAGCTGAACAAATGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR036052	TrpB-like_PALP_sf
IPR001926	TrpB-like_PALP

Search form

LR48_mrnaVigan10g095500