LR48_mrnaVigan02g091600

Transcript Overview
NameLR48_mrnaVigan02g091600
Unique NameLR48_mrnaVigan02g091600_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length990
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_2-CM003372.1supercontigChr_2-CM003372.1:13264101..13265090 -Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan02g091600gene-LR48_Vigan02g091600_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan02g091600LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1-start_codon-Chr_2-CM003372.1_Va_Jingnong6_v1.1-1589992784:13265088..13265090LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1-start_codon-Chr_2-CM003372.1_Va_Jingnong6_v1.1-1589992784:13265088..13265090Vigna angularisstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1-CDS-Chr_2-CM003372.1_Va_Jingnong6_v1.1-1589992784:13264101..13265090LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1-CDS-Chr_2-CM003372.1_Va_Jingnong6_v1.1-1589992784:13264101..13265090Vigna angularisCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1-exon-Chr_2-CM003372.1_Va_Jingnong6_v1.1-1589992784:13264101..13265090LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1-exon-Chr_2-CM003372.1_Va_Jingnong6_v1.1-1589992784:13264101..13265090Vigna angularisexon


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1-stop_codon-Chr_2-CM003372.1_Va_Jingnong6_v1.1-1589992784:13264101..13264103LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1-stop_codon-Chr_2-CM003372.1_Va_Jingnong6_v1.1-1589992784:13264101..13264103Vigna angularisstop_codon


Homology
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan02g091600 vs.
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..329

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan02g091600; organism=Vigna angularis; type=mRNA; length=990bp
ATGGTGAAAGAATTTTACACCAATGCAAGGAAGATTGGTGATTATCCGGC
TGAGGATTACCTAGGCTATGTCAGAGGCCAAGCTATTAGGTATGATCCTG
ACTCTATAAACAGCTTCTTGGGTACTGTATGGGTTGGTGAGCAGTGCCAG
TTTGCTCTATGTATGGAAGAAGGCATTGATTTTGATGATGTGGAGAGTGT
TCTATGTGTACCTAGAGGACATTTTCAGAGGAACATAACTGGTTTTGTGG
TGAACATTAGGAGGACTGACTTGAACCCTCTTGCAAAGTATTGGATGGCA
TTTTCTCATGCCAACATTCAACCATGTTCTCATGTTTTCGACATCACTCT
TAGCAGGGAACTCCTCCTCTACTGTGCGATCAGGAATTTGAATGTCAACA
TTGGACAGGTAATAGCTAATGAGATACGGATGTGTGCTAACACAATAAAC
AACAAAGCACCCTTAGGACATCCTTCTTTGATCACACACCTATGCAAGAT
AGCTGGGGTGGATACTTCTGCTCCACCATTTGAGAGGCCAAGGAAAGCAA
TTGATGAGGCCTATTACAGACAGTACTATGGAGGTGAGGAGGCAACTCAG
CCAGTTCCACCACGCCGTCCTCACAGAGAAAGAGGACAAGCACAGAGTCA
GGCATCTGTAGAGACACATGAAGCAAAGCCTTTCCAAATGAGGGACATGT
ATATGTCTCTTATAGGTGCACACTTACAGTCTATCCATCGAGGGCAGGTG
CCCATTATTGAGATGATTGTTGGAATGTATGATACACCTCCAGCACACAG
GTGGACTATGGATGAGTTCCATAATGTGGTAGCTTGGCTAGAGGAGCAGG
CCCAAGGCGGCAAAGCTGGAGCAGCTGAAGCTTCAGCTATAGAGAAGGAT
GAACATGGTACTGATGATGCTGAGGATGATGCATTTGAGGATGCTGAAGA
TGAGGAAGAGGAGGAGGATACAGATGACAGCACAGACTGA
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protein sequence of LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1

>LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=329bp
MVKEFYTNARKIGDYPAEDYLGYVRGQAIRYDPDSINSFLGTVWVGEQCQ
FALCMEEGIDFDDVESVLCVPRGHFQRNITGFVVNIRRTDLNPLAKYWMA
FSHANIQPCSHVFDITLSRELLLYCAIRNLNVNIGQVIANEIRMCANTIN
NKAPLGHPSLITHLCKIAGVDTSAPPFERPRKAIDEAYYRQYYGGEEATQ
PVPPRRPHRERGQAQSQASVETHEAKPFQMRDMYMSLIGAHLQSIHRGQV
PIIEMIVGMYDTPPAHRWTMDEFHNVVAWLEEQAQGGKAGAAEASAIEKD
EHGTDDAEDDAFEDAEDEEEEEDTDDSTD
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mRNA from alignment at Chr_2-CM003372.1:13264101..13265090-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan02g091600; organism=Vigna angularis; type=mRNA; length=990bp; location=Sequence derived from: Chr_2-CM003372.1:13264101..13265090- (Vigna angularis
ATGGTGAAAGAATTTTACACCAATGCAAGGAAGATTGGTGATTATCCGGC
TGAGGATTACCTAGGCTATGTCAGAGGCCAAGCTATTAGGTATGATCCTG
ACTCTATAAACAGCTTCTTGGGTACTGTATGGGTTGGTGAGCAGTGCCAG
TTTGCTCTATGTATGGAAGAAGGCATTGATTTTGATGATGTGGAGAGTGT
TCTATGTGTACCTAGAGGACATTTTCAGAGGAACATAACTGGTTTTGTGG
TGAACATTAGGAGGACTGACTTGAACCCTCTTGCAAAGTATTGGATGGCA
TTTTCTCATGCCAACATTCAACCATGTTCTCATGTTTTCGACATCACTCT
TAGCAGGGAACTCCTCCTCTACTGTGCGATCAGGAATTTGAATGTCAACA
TTGGACAGGTAATAGCTAATGAGATACGGATGTGTGCTAACACAATAAAC
AACAAAGCACCCTTAGGACATCCTTCTTTGATCACACACCTATGCAAGAT
AGCTGGGGTGGATACTTCTGCTCCACCATTTGAGAGGCCAAGGAAAGCAA
TTGATGAGGCCTATTACAGACAGTACTATGGAGGTGAGGAGGCAACTCAG
CCAGTTCCACCACGCCGTCCTCACAGAGAAAGAGGACAAGCACAGAGTCA
GGCATCTGTAGAGACACATGAAGCAAAGCCTTTCCAAATGAGGGACATGT
ATATGTCTCTTATAGGTGCACACTTACAGTCTATCCATCGAGGGCAGGTG
CCCATTATTGAGATGATTGTTGGAATGTATGATACACCTCCAGCACACAG
GTGGACTATGGATGAGTTCCATAATGTGGTAGCTTGGCTAGAGGAGCAGG
CCCAAGGCGGCAAAGCTGGAGCAGCTGAAGCTTCAGCTATAGAGAAGGAT
GAACATGGTACTGATGATGCTGAGGATGATGCATTTGAGGATGCTGAAGA
TGAGGAAGAGGAGGAGGATACAGATGACAGCACAGACTGA
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Coding sequence (CDS) from alignment at Chr_2-CM003372.1:13264101..13265090-

>LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan02g091600_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan02g091600; organism=Vigna angularis; type=CDS; length=990bp; location=Sequence derived from: Chr_2-CM003372.1:13264101..13265090- (Vigna angularis
ATGGTGAAAGAATTTTACACCAATGCAAGGAAGATTGGTGATTATCCGGC
TGAGGATTACCTAGGCTATGTCAGAGGCCAAGCTATTAGGTATGATCCTG
ACTCTATAAACAGCTTCTTGGGTACTGTATGGGTTGGTGAGCAGTGCCAG
TTTGCTCTATGTATGGAAGAAGGCATTGATTTTGATGATGTGGAGAGTGT
TCTATGTGTACCTAGAGGACATTTTCAGAGGAACATAACTGGTTTTGTGG
TGAACATTAGGAGGACTGACTTGAACCCTCTTGCAAAGTATTGGATGGCA
TTTTCTCATGCCAACATTCAACCATGTTCTCATGTTTTCGACATCACTCT
TAGCAGGGAACTCCTCCTCTACTGTGCGATCAGGAATTTGAATGTCAACA
TTGGACAGGTAATAGCTAATGAGATACGGATGTGTGCTAACACAATAAAC
AACAAAGCACCCTTAGGACATCCTTCTTTGATCACACACCTATGCAAGAT
AGCTGGGGTGGATACTTCTGCTCCACCATTTGAGAGGCCAAGGAAAGCAA
TTGATGAGGCCTATTACAGACAGTACTATGGAGGTGAGGAGGCAACTCAG
CCAGTTCCACCACGCCGTCCTCACAGAGAAAGAGGACAAGCACAGAGTCA
GGCATCTGTAGAGACACATGAAGCAAAGCCTTTCCAAATGAGGGACATGT
ATATGTCTCTTATAGGTGCACACTTACAGTCTATCCATCGAGGGCAGGTG
CCCATTATTGAGATGATTGTTGGAATGTATGATACACCTCCAGCACACAG
GTGGACTATGGATGAGTTCCATAATGTGGTAGCTTGGCTAGAGGAGCAGG
CCCAAGGCGGCAAAGCTGGAGCAGCTGAAGCTTCAGCTATAGAGAAGGAT
GAACATGGTACTGATGATGCTGAGGATGATGCATTTGAGGATGCTGAAGA
TGAGGAAGAGGAGGAGGATACAGATGACAGCACAGACTGA
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