LR48_mrnaVigan02g216100
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Homology
BLAST of LR48_mrnaVigan02g216100 vs. DB:Swiss
Match: HTH_ARATH (Protein HOTHEAD OS=Arabidopsis thaliana OX=3702 GN=HTH PE=1 SV=1) HSP 1 Score: 523.472 bits (1347), Expect = 7.605e-180 Identity = 292/532 (54.89%), Postives = 372/532 (69.92%), Query Frame = 1 Query: 133 SYDYIVIGGGTSGCPLAATLSQGARVLVLERGGSPYTNPERIHLKNFVNSLADXXXXXXXXXXXXTDGVLNARARVLGGGSVLNAGFYSRASSDYIRISGWNESLAEESYKWVEKKVVFEPPMLQWQSAVRDGLLEVGVLPYNEFTYDHLNGTKIGGTIFDKKGNRHTAADLLEYADPKNISVYLHATVQKILFRYNTGKRRPEAYGVIFIDAMGVMHRAYLNRKGKNEIILSAGAIGSPQLLMLSGIGSAKHLQAHGITVVLDRPWVGQDMADNPMNXXXXXXXXXXXXXXXQTVGITKSGSFIETGSGLSLGPSWSERLQKIFEFVSNQSGQPSTFSS-----ENTQRVADLVRFLTGPTLKGGIIIEKITGPRSTGHLELITTNPSDNPSVTFNYFKDPEDLRICVEGMKTIIDVVNS-KALSKFRYPNLPVQAXXXXXXXXXXXXRPKHVNTAYSLQQYCIDTVLTIWHYHGGCLTGKVVDHDYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEQIINKRF 1710 SYDYIVIGGGT+GCPLAATLSQ VLVLERGG P+TN L+NF LADIS SS SQ F+STDGV NARARVLGGGS +NAGFYSRA + +++ +GW+ L +ESY WVE+++V +P + WQ A+RD LLEVGV P+N FTYDH++GTKIGGTIFD+ G RHTAA+LL YA+P+ + V ++ATVQKI+F +T RP GVIF D G H+A L+ + +E+ILS+GAIGSPQ+LMLSGIG K LQ I VVL+ VG+ MADNPMN ++VPS P+E SL+QTVGITK G ++E +G P E + + +SN++ ST + E TQ ++ G I+EK+ P S GHL L+ TN DNPSVTFNYFK P DL+ CVE ++ + VV S + L+ + V +L+L + +NLRPK +N S+ Q+C DTV+TIWHYHGGCL GKVV + KV+GV+ LRVIDGSTF SPGTNPQAT+MM+GRYMG +I+ +R Sbjct: 62 SYDYIVIGGGTAGCPLAATLSQNFSVLVLERGGVPFTNANVSFLRNFHIGLADISASSASQAFVSTDGVYNARARVLGGGSCINAGFYSRADAAFVKRAGWDPKLVKESYPWVEREIVHQPKLTLWQKALRDSLLEVGVRPFNGFTYDHVSGTKIGGTIFDRFGRRHTAAELLAYANPQKLRVLIYATVQKIVF--DTSGTRPRVTGVIFKDEKGNQHQALLSNRKGSEVILSSGAIGSPQMLMLSGIGPKKELQRLKIPVVLENEHVGKGMADNPMNTILVPSKAPIEQSLIQTVGITKMGVYVEASTGFGQSP---ESIHTHYGIMSNKNELFSTIPAKQRRPEATQAYITRNKYQLHEAFNGSFILEKLAYPISRGHLSLVNTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTQCDKQNVHKMLSLSVKANINLRPKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLGVDRLRVIDGSTFDESPGTNPQATMMMMGRYMGVKILRERL 588
BLAST of LR48_mrnaVigan02g216100 vs. DB:Swiss
Match: MDLL_ARATH ((R)-mandelonitrile lyase-like OS=Arabidopsis thaliana OX=3702 GN=At1g73050 PE=2 SV=1) HSP 1 Score: 417.157 bits (1071), Expect = 9.046e-139 Identity = 243/558 (43.55%), Postives = 329/558 (58.96%), Query Frame = 1 Query: 97 FVREATSAPPFLS---YDYIVIGGGTSGCPLAATLSQGARVLVLERGGSPYTNPERIHLKNFVNSLADXXXXXXXXXXXXTD-GVLNARARVLGGGSVLNAGFYSRASSDYIRISG--WNESLAEESYKWVEKKVVFEPPMLQWQSAVRDGLLEVGVLPYNEFTYDHLNGTKIGGTIFDKKGNRHTAADLLEYADPKNISVYLHATVQKILFRY--NTGKRRPEAYGVIFIDAMGVMHRAYLNRKGKNEIILSAGAIGSPQLLMLSGIGSAKHLQAHGITVVLDRPWVGQDMADNPMNXXXXXXXXXXXXXXXQTVGITKSGSFIETGSGLSLGPSWSERLQKIFEFVSNQSGQPSTFSSENTQRVADLVRFLTGPT-LKGGIIIEKITGPRSTGHLELITTNPSDNPSVTFNYFKDPEDLRICVEGMKTIIDVVNSKALS-----------KFRYPNLPVQAXXXXXXXXXXXXRPKHVNTAYSLQQYCIDTVLTIWHYHGGCLTGKVVDHDYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEQIINKRF 1710 F+R ++A F S YDYI++GGGT+GCPLAATLSQ RVL+LERGG PY P + F+ +L D++ ++ GV NAR RVLGG S +NAGFYSRA + SG W+ S +SY+WVE+ +VF P + WQ+A+RD LLEVGV P+N FT +H GTKIGG+ FD+ G RH++ADLL YA NI V ++ATV+++L + A GV++ D +G H A + +G E+ILSAGA+GSPQLL LSGIG +L GI V LD+P VG + DNP N + + P+P+E SL+Q VG+T+ G+F+E S + ++ L +F +R P + I+EKI GP S G L L +T+ NP V FNYF DP+DL CV G + I +++ S+A+ +FR+ P+ P + + +C TV TIWHYHGG + GKVVD D KVIGV +LR++DGSTF SPGTNPQAT+MMLGRYMG +++ +R Sbjct: 38 FMRFISNATDFASEDYYDYIIVGGGTAGCPLAATLSQSFRVLLLERGGVPYNRPNVMSHDGFLTTLTDVNNFDSPAQSFISEEGVPNARGRVLGGSSAINAGFYSRADKQFFENSGLVWDLSSVNQSYEWVERAIVFRPQLRTWQTAIRDALLEVGVHPFNGFTLEHKVGTKIGGSTFDRTGRRHSSADLLRYARSSNIRVAVYATVERVLLASSPSVSGSNVSAIGVVYRDQLGRFHHALIRDRG--EVILSAGALGSPQLLFLSGIGPRSYLSTWGIPVALDQPHVGDFVYDNPRNGISIVPPVPMENSLIQVVGVTEDGAFLEAASNVI---PFASPLHSVF------------------------IRAPASPLYVPVTTIMEKILGPVSIGLLRLASTDVRINPVVRFNYFSDPQDLERCVNGTRKIGEILRSRAMQDFMIREWFGNRRFRFVGAPL---------------PVDQSNDLVMADFCRRTVSTIWHYHGGAVVGKVVDSDLKVIGVNSLRLVDGSTFNISPGTNPQATLMMLGRYMGLKMLRERM 551
BLAST of LR48_mrnaVigan02g216100 vs. DB:Swiss
Match: MDL3_PRUSE ((R)-mandelonitrile lyase 3 OS=Prunus serotina OX=23207 GN=MDL3 PE=2 SV=1) HSP 1 Score: 350.903 bits (899), Expect = 8.588e-113 Identity = 214/544 (39.34%), Postives = 307/544 (56.43%), Query Frame = 1 Query: 85 SKYAFVREATSAPPFLSYDYIVIGGGTSGCPLAATLSQGARVLVLERGGSPYTNPERIHLKNFVNSLA-DXXXXXXXXXXXXTDGVLNARARVLGGGSVLNAGFYSRASSDYIRISG--WNESLAEESYKWVEKKVVFEPPMLQWQSAVRDGLLEVGVLPYNEFTYDHLNGTKIGGTIFDKKGNRHTAADLLEYADPKNISVYLHATVQKILFRYNTGKRRPEAYGVIFIDAMGVMHRAYLNRKGKNEIILSAGAIGSPQLLMLSGIGSAKHLQAHGITVVLDRPWVGQDMADNPMNXXXXXXXXXXXXXXXQTVGITKSGSFIETGSGLSLGPSWSERLQKIFEFVSNQSGQPSTFSSENTQRVADLVRFLTGPTLKGGIIIEKITGPRSTGHLELITTNPSDNPSVTFNYFKDPEDLRICVEGMKTIIDVVNSKALSKFRYPNLPVQAXXXXXXXXXXXXRPKHVNTAYSLQQYCIDTVLTIWHYHGGCLTGKVVDHDYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEQIINKR 1707 S +FV +AT SYDYI++GGGT+GCPLAATLS VLVLERG P P + FV +L + + + F+S DG+ N R RVLGG S++NAG Y RA++ + +G W+ L ++Y+WVE +VFEP WQ+ + LE G+LP N F+ DHL GT++ G+ FD G RH + +LL DP N+ V + A V+KI+F NT A GVI+ D+ G H+A++ +G+ E+ILSAG IGSPQLL+LSG+G +L + I+VV P+VGQ + DNP N + + P P+E S V +GIT S + + S L F F P+T Q A +V + GP G + + + R P+V FNY+ + DL CV GMK + +V+++ AL ++ +LP I P++ + + +C ++V + WHYHGGCL GKV+D ++V G+ ALRV+DGSTF +P ++PQ +MLGRYMG QI+ +R Sbjct: 37 SYLSFVYDATDPELEGSYDYIIVGGGTAGCPLAATLSANYSVLVLERGSLPTEYPNLLISDGFVYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSMINAGVYVRANTSFFNQTGIEWDMDLVNQTYEWVEDTIVFEPDSQTWQTVIGTAYLEAGILPNNGFSVDHLAGTRLTGSTFDNNGTRHASDELLNKGDPNNLRVAVQAAVEKIIFSSNTSGVT--AIGVIYTDSNGTTHQAFV--RGEGEVILSAGPIGSPQLLLLSGVGPESYLTSLNISVVASHPYVGQYIYDNPRNFINILPPNPIEASTVTVLGIT-SDFYQCSISSLPFD-------TPPFSFF------PTTSYPLPNQTFAHIVNKVPGPLSHGTVTLNSSSDVRV-------------GPNVKFNYYSNLTDLSHCVSGMKKLGEVLSTDALEPYKVEDLP----GIDGFNILGIPLPENQTDDAAFETFCRESVASYWHYHGGCLVGKVLDDGFRVTGINALRVVDGSTFPSTPASHPQGFYLMLGRYMGIQILQER 545
BLAST of LR48_mrnaVigan02g216100 vs. DB:Swiss
Match: MDL2_PRUSE ((R)-mandelonitrile lyase 2 OS=Prunus serotina OX=23207 GN=MDL2 PE=2 SV=1) HSP 1 Score: 350.132 bits (897), Expect = 1.744e-112 Identity = 210/547 (38.39%), Postives = 301/547 (55.03%), Query Frame = 1 Query: 85 SKYAFVREATSAPPFLSYDYIVIGGGTSGCPLAATLSQGARVLVLERGGSPYTNPERIHLKNFVNSLADXXXXXXXXXXXXT-DGVLNARARVLGGGSVLNAGFYSRASSDYIRISG--WNESLAEESYKWVEKKVVFEPPMLQWQSAVRDGLLEVGVLPYNEFTYDHLNGTKIGGTIFDKKGNRHTAADLLEYADPKNISVYLHATVQKILFRYNTGKRRPEAYGVIFIDAMGVMHRAYLNRKGKNEIILSAGAIGSPQLLMLSGIGSAKHLQAHGITVVLDRPWVGQDMADNPMNXXXXXXXXXXXXXXXQTVGITKSGSFIETGS-GLSLGPSWSERLQKIFEFVSNQSGQPSTFSSENTQRVADLVRFLTGPTLKGGIIIEKITGPRSTGHLELITTNPSDNPSVTFNYFKDPEDLRICVEGMKTIIDVVNSKALSKFRYPNLPVQAXXXXXXXXXXXXRPKHVNTAYSLQQYCIDTVLTIWHYHGGCLTGKVVDHDYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEQIINKRFS 1713 S FV +A +YDYI++GGGT+GCPLAATLS VLVLERG P P + F+ +L + DG+ N R RVLGG S++NAG Y RA++ + +G W+ L ++Y WVE +VF+P WQ+ LEVG+LP N F+ DHL GT++ G+ FD G RH + +LL DP N+ V +HA V+KI+F ++ A GVI+ D+ G H+A++ +G E+ILSAG IGSPQLL+LSG+G +L + I+VV P+VGQ + DNP N + + P P+E S V +GIT S S P F F N T+ NT A +V + GP G ++++ + R P+VTFNY+ + DL CV GMK I + ++S AL ++ +LP I P++ + + +C + V + WHYHGGCL G+V+D D++V G+ ALRV+DGSTF +P ++PQ +MLGRYMG +I+ +R + Sbjct: 38 SYLEFVYDANDTELEGTYDYIIVGGGTAGCPLAATLSANYSVLVLERGTLPTEYPNLLTSDGFIYNLQQEDDGQTPVERFVSGDGIDNVRGRVLGGTSMINAGVYVRANTSFFNQTGIEWDMDLVNKTYDWVEDTIVFKPDFQFWQNLTGTAFLEVGILPDNGFSLDHLEGTRLTGSTFDNNGTRHASDELLNKGDPNNLRVAVHAAVEKIIFSSDSSGVT--AIGVIYTDSNGTTHQAFV--RGDGEVILSAGPIGSPQLLLLSGVGLESYLTSLNISVVASHPYVGQYIYDNPRNFINILPPNPIEASTVTVLGITSDFYQCSISSLPFSTAP---------FGFFPN-----PTYPLPNTT-FAHIVNKVPGPLSHGTVLLQSTSDVRVA-------------PNVTFNYYSNTTDLAHCVSGMKKIGEFLSSDALKPYKVEDLP----GIEGFDILGIPLPENQTDDAAFETFCREAVASYWHYHGGCLVGEVLDDDFRVTGINALRVVDGSTFPSTPASHPQGFYLMLGRYMGTKILQERLA 548
BLAST of LR48_mrnaVigan02g216100 vs. DB:Swiss
Match: MDL1_PRUSE ((R)-mandelonitrile lyase 1 OS=Prunus serotina OX=23207 GN=MDL1 PE=1 SV=1) HSP 1 Score: 347.436 bits (890), Expect = 1.476e-111 Identity = 216/547 (39.49%), Postives = 307/547 (56.12%), Query Frame = 1 Query: 97 FVREATSAPPFLSYDYIVIGGGTSGCPLAATLSQGARVLVLERGGSPYTNPERIHLKNFVNSLA-DXXXXXXXXXXXXTDGVLNARARVLGGGSVLNAGFYSRASSDYIRISG--WNESLAEESYKWVEKKVVFEPPMLQWQSAVRDGLLEVGVLPYNEFTYDHLNGTKIGGTIFDKKGNRHTAADLLEYADPKNISVYLHATVQKILFRYNTGKRRPEAYGVIFIDAMGVMHRAYLNRKGKNEIILSAGAIGSPQLLMLSGIGSAKHLQAHGITVVLDRPWVGQDMADNPMNXXXXXXXXXXXXXXXQTVGITKS------GSFIETGSGLSLGPSWSERLQKIFEFVSNQSGQPSTFSSENTQRVADLVRFLTGPTLKGGIIIEKITGPRSTGHLEL-ITTNPSDNPSVTFNYFKDPEDLRICVEGMKTIIDVVNSKALSKFRYPNLPVQAXXXXXXXXXXXXRPKHVNTAYSLQQYCIDTVLTIWHYHGGCLTGKVVDHDYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEQIINKR 1707 F +AT SYDY+++GGGTSGCPLAATLS+ +VLVLERG P P + FV +L + + + F+S DG+ N R RVLGG S++NAG Y+RA++ SG W+ L ++Y+WVE +VF+P WQS LE GV P + F+ DH GT+I G+ FD KG RH A +LL + N+ V +HA+V+KI+F G A GVI+ D+ G HRA++ KG E+I+SAG IG+PQLL+LSG+G +L + I VVL P+VGQ + DNP N + + P P+E ++V +GI+ S T S PS S L STF+ K+ GP S G L L ++N +P+V FNY+ +P DL CV GMK I +++++ AL ++ +LP I PK + + +C ++V + WHYHGGCL GKV+D D++V G++ALRV+DGSTF +P ++PQ +MLGRY+G +I+ +R Sbjct: 41 FAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSMINAGVYARANTSIYSASGVDWDMDLVNKTYEWVEDTIVFKPNYQPWQSVTGTAFLEAGVDPNHGFSLDHEAGTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNAPGLT---ATGVIYRDSNGTPHRAFVRSKG--EVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGISNDFYQCSFSSLPFTTPPFSFFPSTSYPLPN------------STFAH----------------------FASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNPTDLSHCVSGMKKIGELLSTDALKPYKVEDLP----GIEGFNILGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGIDALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQER 544
BLAST of LR48_mrnaVigan02g216100 vs. DB:Swiss
Match: MDL2_PRUDU ((R)-mandelonitrile lyase 2 OS=Prunus dulcis OX=3755 GN=MDL2 PE=1 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.707e-109 Identity = 213/551 (38.66%), Postives = 307/551 (55.72%), Query Frame = 1 Query: 85 SKYAFVREATSAPPFLSYDYIVIGGGTSGCPLAATLSQGARVLVLERGGSPYTNPERIHLKNFVNSLA-DXXXXXXXXXXXXTDGVLNARARVLGGGSVLNAGFYSRASSDYIRISG--WNESLAEESYKWVEKKVVFEPPMLQWQSAVRDGLLEVGVLPYNEFTYDHLNGTKIGGTIFDKKGNRHTAADLLEYADPKNISVYLHATVQKILFRYNTGKRRPEAYGVIFIDAMGVMHRAYLNRKGKNEIILSAGAIGSPQLLMLSGIGSAKHLQAHGITVVLDRPWVGQDMADNPMNXXXXXXXXXXXXXXXQTVGITKS------GSFIETGSGLSLGPSWSERLQKIFEFVSNQSGQPSTFSSENTQRVADLVRFLTGPTLKGGIIIEKITGPRSTGHLEL-ITTNPSDNPSVTFNYFKDPEDLRICVEGMKTIIDVVNSKALSKFRYPNLPVQAXXXXXXXXXXXXRPKHVNTAYSLQQYCIDTVLTIWHYHGGCLTGKVVDHDYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEQIINKR 1707 S +F +AT SYDY+++GGGTSGCPLAATLS+ +VLVLERG P P + FV +L + + + F+S DG+ N R RVLGG S++NAG Y+RA++ SG W+ L ++Y+WVE +V++P WQS + LE GV P + F+ DH GT+I G+ FD KG RH A +LL + N+ V +HA+V+KI+F G A GVI+ D+ G H+A++ KG E+I+SAG IG+PQLL+LSG+G +L + I VVL P+VGQ + DNP N + + P P+E ++V +GI+ S T PS S L STF+ K+ GP S G L L ++N +P+V FNY+ + DL CV GMK I +++++ AL ++ +LP I PK + + +C ++V + WHYHGGCL GKV+D D++V G+ ALRV+DGSTF +P ++PQ +MLGRY+G +I+ +R Sbjct: 37 SYLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSIINAGVYARANTSIYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNAPGLT---ATGVIYRDSNGTPHQAFVRSKG--EVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGISNDFYQCSFSSLPFTTPPFGFFPSASYPLPN------------STFAH----------------------FASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDLP----GVEGFNILGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQER 544
BLAST of LR48_mrnaVigan02g216100 vs. DB:Swiss
Match: MDL1_PRUDU ((R)-mandelonitrile lyase 1 OS=Prunus dulcis OX=3755 GN=MDL1 PE=1 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 5.700e-107 Identity = 210/561 (37.43%), Postives = 300/561 (53.48%), Query Frame = 1 Query: 97 FVREATSAPPFLSYDYIVIGGGTSGCPLAATLSQGARVLVLERGGSPYTNPERIHLKNFVNSLADXXXXXXXXXXXXT-DGVLNARARVLGGGSVLNAGFYSRASSDYIRISG--WNESLAEESYKWVEKKVVFEPPMLQWQSAVRDGLLEVGVLPYNEFTYDHLNGTKIGGTIFDKKGNRHTAADLLEYADPKNISVYLHATVQKILFRYNTGKRRPEAYGVIFIDAMGVMHRAYLNRKGKNEIILSAGAIGSPQLLMLSGIGSAKHLQAHGITVVLDRPWVGQDMADNPMNXXXXXXXXXXXXXXXQTVGITKS------GSFIETGSGLSLGPSWSERLQKIFEFVSNQSGQPSTFSSENTQRVADLVRFLTGPTLKGGIIIEKITGPRSTGHLELITTNPSDN----PSVTFNYFKDPEDLRICVEGMKTIIDVVNSKALSK-----------FRYPNLPVQAXXXXXXXXXXXXRPKHVNTAYSLQQYCIDTVLTIWHYHGGCLTGKVVDHDYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEQIINKR 1707 FV AT SYDYIVIGGGTSGCPLAATLS+ +VL+LERG P + F +L + DG+ N RAR+LGG +++NAG Y+RA+ + +G W+ L ++Y+WVE +V +P WQS + +G LE G+LP N F+ DH GT++ G+ FD G RH A +LL DP N+ V + A+V+KILF NT A GVI+ D+ G H+A++ +G E+I+SAG IG+PQLL+LSG+G +L + ITVV P+VGQ + +NP N + P P+E S+V +GI S + SL P+ S L STF+ I+ ++ GP S G +T N S + P++ FNY+ + DL CV GMK + D++ +KAL F Y +P+ P++ S + +C+D V + WHYHGG L GKV+D ++V+G++ALRV+D STF P ++PQ +MLGRY+G QI+ +R Sbjct: 41 FVYNATDTSLEGSYDYIVIGGGTSGCPLAATLSEKYKVLLLERGTIATEYPNTLTADGFAYNLQQQDDGKTPVERFVSEDGIDNVRARILGGTTIINAGVYARANISFYSQTGIEWDLDLVNKTYEWVEDAIVVKPNNQSWQSVIGEGFLEAGILPDNGFSLDHEAGTRLTGSTFDNNGTRHAADELLNKGDPNNLLVAVQASVEKILFSSNTSNL--SAIGVIYTDSDGNSHQAFV--RGNGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNITVVQPNPYVGQFLYNNPRNFINNFPPNPIEASVVTVLGIRSDYYQVSLSSLPFSTPPFSLFPTTSYPLPN------------STFAH----------------------IVSQVPGPLSHGS---VTLNSSSDVRIAPNIKFNYYSNSTDLANCVSGMKKLGDLLRTKALEPYKARDVLGIDGFNYLGVPL---------------PENQTDDASFETFCLDNVASYWHYHGGSLVGKVLDDSFRVMGIKALRVVDASTFPYEPNSHPQGFYLMLGRYVGLQILQER 545
BLAST of LR48_mrnaVigan02g216100 vs. DB:Swiss
Match: MDL4_PRUSE ((R)-mandelonitrile lyase 4 OS=Prunus serotina OX=23207 GN=MDL4 PE=2 SV=1) HSP 1 Score: 335.109 bits (858), Expect = 1.091e-106 Identity = 206/529 (38.94%), Postives = 291/529 (55.01%), Query Frame = 1 Query: 133 SYDYIVIGGGTSGCPLAATLSQGARVLVLERGGSPYTNPERIHLKNFVNSLADXXXXXXXXXXXXT-DGVLNARARVLGGGSVLNAGFYSRASSDYIRISG--WNESLAEESYKWVEKKVVFEPPMLQWQSAVRDGLLEVGVLPYNEFTYDHLNGTKIGGTIFDKKGNRHTAADLLEYADPKNISVYLHATVQKILFRYNTGKRRPEAYGVIFIDAMGVMHRAYLNRKGKNEIILSAGAIGSPQLLMLSGIGSAKHLQAHGITVVLDRPWVGQDMADNPMNXXXXXXXXXXXXXXXQTVGITKSGSFIETGSGLSLGPSWSERLQKIFEFVSNQSGQPSTFSSENTQRVADLVRFLTGPTLKGGIIIEKITGPRSTGHLEL-ITTNPSDNPSVTFNYFKDPEDLRICVEGMKTIIDVVNSKALSKFRYPNLPVQAXXXXXXXXXXXXRPKHVNTAYSLQQYCIDTVLTIWHYHGGCLTGKVVDHDYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEQIINKR 1707 SYDYI++GGGTSGCPLAATLS VLVLERG P + + F +L + DG+ N R+R+LGG +++NAG Y+RA+ + SG W+ L E+Y+WVE +V++P WQS LE GV P N F H GT++ G+ FD G RH + +LL DP N+ V + A VQKI+F +T A GV++ D+ G HRA ++ GK E+ILSAG +G+PQLL+LSG+G +L + I+VV P+VGQ + DNP N + + P P+E S V +GIT S P +S +F P+T Q A I+ K+ GP S G L L ++N S P+V FNY DP DL CV GMK I +++ AL ++ +LP I P++ + +++C DTV + WHYHGG + GKV+D +++V G+ ALRV+DGSTF +P ++PQ +MLGRY+G +I+ +R Sbjct: 54 SYDYIIVGGGTSGCPLAATLSANYSVLVLERGTIATEYPNTLTVDGFAYNLQQQDDGKTPVERFVSEDGIDNVRSRILGGTTIINAGVYARANESFYNNSGVEWDLDLVNEAYEWVEDAIVYKPSNQSWQSITGTAFLEAGVHPDNGFGLVHEEGTRLTGSTFDNSGTRHASDELLNKGDPDNLKVAVEAAVQKIIF--STESSGLTAVGVVYTDSNGTSHRALVS--GKGEVILSAGTLGTPQLLLLSGVGPESYLTSLNISVVASHPYVGQYVNDNPRNFINILPPNPIEPSTVTVLGITSDFYQCSLSSLPFDTPPFS-----LF---------PTTSYPLPNQTFAH--------------IVSKVPGPLSAGSLTLQSSSNVSVAPNVKFNYCSDPVDLTHCVSGMKKIGVFLSTDALKPYKVDDLP----GIDGFNILGTPLPENQTDDAAFEKFCRDTVASYWHYHGGAIVGKVIDGNFRVTGINALRVVDGSTFPATPASHPQGFYLMLGRYVGTKIVQER 546
BLAST of LR48_mrnaVigan02g216100 vs. DB:Swiss
Match: PATE_ASPCL (Dehydrogenase patE OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) OX=344612 GN=patE PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.521e-27 Identity = 156/612 (25.49%), Postives = 240/612 (39.22%), Query Frame = 1 Query: 133 SYDYIVIGGGTSGCPLAATLS-QGA-RVLVLERGGSPYTNPERIHLKNFVNSLADXXXXXXXXXXXXTDGV-----------------LNARARVLGGGSVLNAGFYSRAS-SDYIRISGWNESLAEESYKW------VEKKVVFEPP---------MLQWQSAV-----------------------RDGLLEVGVLPYNEFTYDHLNGTKIGGTIFDKKGNRHTAAD---LLEYADPKNISVYLHATVQKILFRYNTGKRRPEAYGVIFIDAMGVMHRAYLNRKGKNEIILSAGAIGSPQLLMLSGIGSAKHLQAHGITVVLDRPWVGQDMADNPMNXXXXXXXXXXXXXXXQ-TVGITKSGSFIETGSGLSLGPSWSERLQKIFEFVSNQSGQPSTFSSENTQRV-----ADL--VRFLTGPTLKG----------------GIIIEKITGPRSTGHLELITTNPSDNPSVTFNYFKDPEDLRICVEGMKTIIDVVNSKALSKFRYPNLPVQAXXXXXXXXXXXXRPKHVNTAYSLQQYCIDTVLTIWHYHGGCLTGK------VVDHDYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEQI 1695 ++DY+VIGGGT+G +A+ L+ QGA V V+E GG ++ N A+ + GV AR + LGG S N Y R + S Y R W + + ++SY W EK + F P +Q+ AV + LE+G+ N F L G G + +++ L N V+ ++ILF GK+R A + +D G + + E++LSAGA SPQLLM+SG+G A LQ HGI +V DRP VGQ++ D+ + L + +L+ T + + E +G+ P+ I + + S + S T+R AD + FLT G + + PRS G++ + + + + P + N+ DP D+ + V K D + AL PV + V T ++ + + TI+H C GK VVD +VIGV+ALRV+D S F P +PQ+T+ L + I Sbjct: 50 TFDYVVIGGGTAGLAIASRLAEQGAGTVAVIEAGGF-----YELNNGNLSQIPANDAYYVGKDLDDWQPGVDWGFHTVPQAGAYGRASHYARGKCLGGSSARNYMAYQRGTKSSYQR---WADMVGDQSYAWENFLPFFEKSLHFTPANDALRGANATVQYDPAVLGNGQGPLSVTYSHYVQSFATWAQKAFLEMGLAVRNCFQSGELLGQSFGMYTINATTMHRESSETSFLRRALAYPNFMVFQSTLAKRILF---DGKKRAVA---VQLDTQGYRY----TLTARKEVVLSAGAFQSPQLLMVSGVGPAATLQQHGIPLVADRPGVGQNLQDHIIYAPSYRVDLITQSALLNATFEAQANRDYHERAAGIYANPT-----SDILAWEKIPEPKRSAWLSNTTRRALAQYPADWPEIEFLTMGGFFGYQNNYVRDNPSDGYNYASLAVSLCTPRSRGNVSIASADAAVPPLINPNWLTDPVDVELAVAAFKRARDFFGTSALK-------PVLIGDEYFPG-------ERVATDAQIEDHVRKSFDTIFHASCTCAMGKREDQMAVVDSKARVIGVDALRVVDASAFPMLPPGHPQSTIYALAEKIACDI 624
BLAST of LR48_mrnaVigan02g216100 vs. DB:Swiss
Match: CHOX_ARTGO (Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 8.340e-25 Identity = 136/498 (27.31%), Postives = 208/498 (41.77%), Query Frame = 1 Query: 343 NARARVLGGGSVLNA--GFYS-RASSDYIRI----SGWNESLAEESYKWVEKK-----------------VVFEPPMLQWQSAVRDGLLEVGVLPYNEFTYDHLNGTKI--GGTIF--DKKGNRHTAADLLEYADP----KNISVYLHATVQKILFRYNTGKRRPEAYGVIFID-AMGVMHRAYLNRKGKNEIILSAGAIGSPQLLMLSGIGSAKHLQAHGITVVLDRPWVGQDMADNPMNXXXXXXXXXXXXXXXQTVGITKSGSFIETGSGLSLGPSWSERLQKIFEFVSNQSGQPSTFSSENTQRVADLVRFLTGPTLKGGIIIEKITGPRSTGHLELITTNPSDNPSVTFNYFKDPE--DLRICVEGMKTIIDVVNSKALSKF--RYPNLPVQAXXXXXXXXXXXXRPKHVNTAYSLQQYCIDTVLTIWHYHGGCLTGKV------VDHDYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYMGEQIINKR 1707 +ARA+V+GG S N+ F++ R D +GWN A YK +E ++ PP A+ D + G+ P +F GT + G F +++ + ++ + Y P +N ++ ++++F RR GV +D A G HR +NE++LS GAI +P+LLMLSGIG A HL HGI V++D P VG+ + D+P V+ + P+ Q I G F T GL F+ + + G P+T EN G + +T RS G + L + + D P V YF DPE D+R+ V G++ ++ A++++ R + V+A T LQ Y T T++H G G V +D + +V GV LRV D S NP TVMM+G + I + R Sbjct: 87 HARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGVALLDACEQAGI-PRAKFN----TGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVF---DADRR--CTGVDIVDSAFGHTHRL----TARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGVVQFEAKQPMVAESTQWWEI---GIFTPTEDGLDRPDLMMHYGSVPFDMNTLRHGYPTT---EN-----------------GFSLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRELSPGVEA-----------------QTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSAR 530 The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan02g216100 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
Sequences
The
following sequences are available for this feature:
mRNA sequence >LR48_mrnaVigan02g216100_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan02g216100_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan02g216100; organism=Vigna angularis; type=mRNA; length=2361bpback to top protein sequence of LR48_mrnaVigan02g216100_Va_Jingnong6_v1.1 >LR48_mrnaVigan02g216100_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan02g216100_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan02g216100_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=572bpback to top mRNA from alignment at Chr_2-CM003372.1:29732791..29735151+ Legend: polypeptidestart_codonexonCDSintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.>LR48_mrnaVigan02g216100_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan02g216100_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan02g216100; organism=Vigna angularis; type=mRNA; length=2361bp; location=Sequence derived from: Chr_2-CM003372.1:29732791..29735151+ (Vigna angularisback to top Coding sequence (CDS) from alignment at Chr_2-CM003372.1:29732791..29735151+ >LR48_mrnaVigan02g216100_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan02g216100_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan02g216100; organism=Vigna angularis; type=CDS; length=1719bp; location=Sequence derived from: Chr_2-CM003372.1:29732791..29735151+ (Vigna angularisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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