LR48_mrnaVigan09g030700

Transcript Overview
NameLR48_mrnaVigan09g030700
Unique NameLR48_mrnaVigan09g030700_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length306
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_9-CM003379.1supercontigChr_9-CM003379.1:3474825..3475130 -Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR186Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR201Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR213Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR224Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR231Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL010Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasL074Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR106Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asasR121Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0092Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0307Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0363Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0416Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0540Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0598Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0819Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0822Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0971Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL1060Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR252Cicer arietinum ICC 4958 genome v2Cicer arietinum
ascaiR309Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0374Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR223Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR249Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
ascrR272Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR191Pisum sativum Cameor genome v1aPisum sativum
aspsR203Pisum sativum Cameor genome v1aPisum sativum
aspsR219Pisum sativum Cameor genome v1aPisum sativum
aspsR221Pisum sativum Cameor genome v1aPisum sativum
aspsR232Pisum sativum Cameor genome v1aPisum sativum
aspvR175Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR187Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
aspvR251Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR139Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR142Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR157Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR198Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR203Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR204Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR188Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR198Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR217Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR226Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR191Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR200Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR221Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR232Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR148Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR157Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR164Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR174Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR185Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR206Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR238Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR241Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR251Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR136Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR142Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR183Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR195Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR173Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR188Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR194Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR200Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR214Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_16131Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.009G015900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg55939.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_22033Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_08162Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg30594.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_004500702.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigun11g182600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat4g098640.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_004500893.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-KK1_013185Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_18876Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
jg17152.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.4g114160.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.1g287680.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigun09g252500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_12352Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_004507466.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-TanjilR_22860Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Tiffany.R1.4g086840.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_17332Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_30951Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.002G109600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun03g259700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014664973.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun09g270800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014645088.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cr_15797.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan08g178400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
LR48_mrnaVigan04g248100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan09g030700gene-LR48_Vigan09g030700_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g030700LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1-start_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3475128..3475130LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1-start_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3475128..3475130Vigna angularisstart_codon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1-CDS-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3474825..3475130LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1-CDS-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3474825..3475130Vigna angularisCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3474825..3475130LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3474825..3475130Vigna angularisexon


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1-stop_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3474825..3474827LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1-stop_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:3474825..3474827Vigna angularisstop_codon


Homology
BLAST of LR48_mrnaVigan09g030700 vs. DB:Swiss
Match: SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.420e-48
Identity = 73/104 (70.19%), Postives = 89/104 (85.58%), Query Frame = 1
Query:    7 LKKSTKLPQAALIKQILKRCSSLGRK-----DDEGLRLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHEKGLTIPCQQHVFESLTSMLR 303
            +KK++KL Q A++KQILKRCSSLG+K     D++ L LDVPKGHF VYVGENRSRYIVPISFL+ PEFQ+LL +AEEEFGFDH+ GLTIPC + VF++LTSM+R
Sbjct:    4 MKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMIR 107          
BLAST of LR48_mrnaVigan09g030700 vs. DB:Swiss
Match: SAU10_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.380e-38
Identity = 68/112 (60.71%), Postives = 78/112 (69.64%), Query Frame = 1
Query:    1 MALKKSTKL--PQAALIKQILKRCSSLGR---------KDDEGLRLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHEKGLTIPCQQHVFESLTSMLR 303
            MA+K+S+K    QAA IKQI+KRCSSL +           ++ L  DVPKGHF VYVG NRSRYIVPIS+L   EFQTLL  AEEEFGFDH+ GLTIPC +  F SL SM R
Sbjct:    1 MAIKRSSKATSSQAASIKQIVKRCSSLRKMKNVNGCYYNQEDDLPQDVPKGHFPVYVGPNRSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISMFR 112          
BLAST of LR48_mrnaVigan09g030700 vs. DB:Swiss
Match: SAU50_HELAN (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.095e-36
Identity = 60/99 (60.61%), Postives = 74/99 (74.75%), Query Frame = 1
Query:    7 LKKSTKLPQAALIKQILKRCSSLGRK-DDEGLRLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHEKGLTIPCQQHVFESLTSML 300
            ++KS K  QA  IK+I+K+CSS G+  DD GL  DVPKGHFVVYVGE R+RYIVPIS L  P FQ LL ++EEEFGF+H+ G+ IPCQ+  F S  SM+
Sbjct:    4 IRKSHKQTQALAIKKIIKKCSSFGKNNDDSGLPNDVPKGHFVVYVGERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDFLSFFSMI 102          
BLAST of LR48_mrnaVigan09g030700 vs. DB:Swiss
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.496e-23
Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 1
Query:  106 DVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHE-KGLTIPCQQHVFESLTSMLR 303
            D PKG+  VYVGE   R+++P+S+L++P FQ LL QAEEEFG+DH   GLTIPC + VF+ +TS L 
Sbjct:   16 DAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82          
BLAST of LR48_mrnaVigan09g030700 vs. DB:Swiss
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.250e-23
Identity = 40/76 (52.63%), Postives = 53/76 (69.74%), Query Frame = 1
Query:   76 GRKDDEGLRLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHE-KGLTIPCQQHVFESLTSML 300
             R +     LD PKG+  VYVGEN  R+++P+S L++P FQ LL QAEEEFG+DH   GLTIPC + +F+ +TS L
Sbjct:   14 ARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCL 89          
BLAST of LR48_mrnaVigan09g030700 vs. DB:Swiss
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.949e-22
Identity = 36/68 (52.94%), Postives = 50/68 (73.53%), Query Frame = 1
Query:  103 LDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHE-KGLTIPCQQHVFESLTSMLR 303
            +D PKG+  VYVGE   R+++P+S++++P FQ LL QAEEEFG+DH   GLTIPC + VF+ +T  L 
Sbjct:   15 VDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRITCCLN 82          
BLAST of LR48_mrnaVigan09g030700 vs. DB:Swiss
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.585e-22
Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 1
Query:   61 RCSSLGRKDDEGLRLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHE-KGLTIPCQQHVFESLTSMLR 303
            R +S+         ++VPKG+ VVYVG+   R+++P+S+L++P FQ LL+QAEEEFG+DH   GLTIPC++  F ++TS L 
Sbjct:    9 RKTSIAANQASSKSVEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLN 90          
BLAST of LR48_mrnaVigan09g030700 vs. DB:Swiss
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.154e-21
Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 1
Query:   61 RCSSLGRKDDEGLRLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDH-EKGLTIPCQQHVFESLTSMLR 303
            R +S          +DV KG+  VYVGE   R+++P+S+L++P FQ LL QAEEEFG+ H   GLTIPC + VF+ +TS L 
Sbjct:    9 RKASFSANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90          
BLAST of LR48_mrnaVigan09g030700 vs. DB:Swiss
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.011e-21
Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 1
Query:   43 IKQILKRCSSLGRKDDEGLRLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHE-KGLTIPCQQHVFESLTSMLR 303
            I  I++R +S         R+DVPKG+  VYVG+   R+ +P+S+L+ P FQ LL QAEEEFG+DH   GLTIPC++  F ++T+ L 
Sbjct:    5 IAGIVRR-TSFYTTQAASKRVDVPKGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLN 91          
BLAST of LR48_mrnaVigan09g030700 vs. DB:Swiss
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.996e-20
Identity = 42/88 (47.73%), Postives = 57/88 (64.77%), Query Frame = 1
Query:   46 KQILKRCSSLGRKDDEGLRLDVPKGHFVVYVGEN-RSRYIVPISFLSRPEFQTLLHQAEEEFGFDHE-KGLTIPCQQHVFESLTSMLR 303
            K+IL R +  G           PKG   VYVGE+ + RY+VP+S+L++P FQ LL ++EEEFGFDH   GLTIPC +  F ++TS L+
Sbjct:   11 KKILSRSTGAGSA--------APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 90          
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan09g030700 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
SAU50_ARATH1.420e-4870.19Auxin-responsive protein SAUR50 OS=Arabidopsis tha... [more]
SAU10_ARATH6.380e-3860.71Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabido... [more]
SAU50_HELAN1.095e-3660.61Auxin-responsive protein SAUR50 OS=Helianthus annu... [more]
AX15A_SOYBN3.496e-2356.72Auxin-induced protein 15A OS=Glycine max OX=3847 P... [more]
ARG7_VIGRR9.250e-2352.63Indole-3-acetic acid-induced protein ARG7 OS=Vigna... [more]
AXX15_SOYBN2.949e-2252.94Auxin-induced protein X15 OS=Glycine max OX=3847 P... [more]
AX10A_SOYBN3.585e-2247.56Auxin-induced protein X10A OS=Glycine max OX=3847 ... [more]
AX6B_SOYBN1.154e-2147.56Auxin-induced protein 6B OS=Glycine max OX=3847 PE... [more]
A10A5_SOYBN5.011e-2146.59Auxin-induced protein 10A5 OS=Glycine max OX=3847 ... [more]
SAU24_ARATH1.996e-2047.73Auxin-responsive protein SAUR24 OS=Arabidopsis tha... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 27..100
e-value: 7.3E-28
score: 96.5

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g030700; organism=Vigna angularis; type=mRNA; length=306bp
ATGGCTTTGAAAAAATCAACTAAACTCCCTCAAGCAGCACTCATCAAGCA
AATCCTCAAGAGGTGTTCCAGCTTAGGTAGGAAAGACGACGAAGGCCTTC
GCTTGGACGTCCCCAAGGGTCACTTTGTTGTCTACGTCGGAGAAAACAGA
AGCAGATATATAGTCCCTATTTCCTTCCTTAGTCGCCCTGAGTTCCAAAC
ACTTCTACACCAGGCTGAAGAAGAGTTTGGCTTCGATCACGAAAAGGGTC
TCACCATTCCATGCCAACAACACGTTTTTGAGTCTCTCACCTCCATGCTC
CGATGA
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protein sequence of LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1

>LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=101bp
MALKKSTKLPQAALIKQILKRCSSLGRKDDEGLRLDVPKGHFVVYVGENR
SRYIVPISFLSRPEFQTLLHQAEEEFGFDHEKGLTIPCQQHVFESLTSML
R
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mRNA from alignment at Chr_9-CM003379.1:3474825..3475130-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g030700; organism=Vigna angularis; type=mRNA; length=306bp; location=Sequence derived from: Chr_9-CM003379.1:3474825..3475130- (Vigna angularis
ATGGCTTTGAAAAAATCAACTAAACTCCCTCAAGCAGCACTCATCAAGCA AATCCTCAAGAGGTGTTCCAGCTTAGGTAGGAAAGACGACGAAGGCCTTC GCTTGGACGTCCCCAAGGGTCACTTTGTTGTCTACGTCGGAGAAAACAGA AGCAGATATATAGTCCCTATTTCCTTCCTTAGTCGCCCTGAGTTCCAAAC ACTTCTACACCAGGCTGAAGAAGAGTTTGGCTTCGATCACGAAAAGGGTC TCACCATTCCATGCCAACAACACGTTTTTGAGTCTCTCACCTCCATGCTC CGATGA
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Coding sequence (CDS) from alignment at Chr_9-CM003379.1:3474825..3475130-

>LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g030700_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g030700; organism=Vigna angularis; type=CDS; length=306bp; location=Sequence derived from: Chr_9-CM003379.1:3474825..3475130- (Vigna angularis
ATGGCTTTGAAAAAATCAACTAAACTCCCTCAAGCAGCACTCATCAAGCA
AATCCTCAAGAGGTGTTCCAGCTTAGGTAGGAAAGACGACGAAGGCCTTC
GCTTGGACGTCCCCAAGGGTCACTTTGTTGTCTACGTCGGAGAAAACAGA
AGCAGATATATAGTCCCTATTTCCTTCCTTAGTCGCCCTGAGTTCCAAAC
ACTTCTACACCAGGCTGAAGAAGAGTTTGGCTTCGATCACGAAAAGGGTC
TCACCATTCCATGCCAACAACACGTTTTTGAGTCTCTCACCTCCATGCTC
CGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin