LR48_mrnaVigan09g195900

Transcript Overview


Name	LR48_mrnaVigan09g195900
Unique Name	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1
Type	mRNA
Organism	Vigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length	6659
Product	hypothetical protein

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr_9-CM003379.1	supercontig	Chr_9-CM003379.1:24572817..24579475 +	Vigna angularis Jingnong 6 genome v1.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna angularis Jingnong 6 genome v1.1	2020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.1	2020-05-21
BLAST: V. angularis Jingnong 6 genome v1.1	2020-05-21

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ascaR153	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ascaR228	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
asasL003	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
anasL0242	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0247	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0484	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0644	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anasL0906	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ascaiR211	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
ascaiR305	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
asccR0268	Cajanus cajan Asha genome v1.0	Cajanus cajan
asccR0319	Cajanus cajan Asha genome v1.0	Cajanus cajan
ascrR286	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
aspsR177	Pisum sativum Cameor genome v1a	Pisum sativum
aspsR205	Pisum sativum Cameor genome v1a	Pisum sativum
aspsR206	Pisum sativum Cameor genome v1a	Pisum sativum
aspvR192	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
aspvR222	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
asvuR155	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
asvuR173	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
astifR182	Vicia faba cv. Tiffany genome v1.0	Vicia faba
astifR225	Vicia faba cv. Tiffany genome v1.0	Vicia faba
asvfhR184	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
asvfhR210	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
asvfhR233	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
asvrvR136	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
asvrvR180	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
asvssR183	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvssR196	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvssR225	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvssR228	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
asvuaR140	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
asvuaR167	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
ascanR139	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
ascanR211	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Orthologs


Gene/Transcript	Assembly	Species
rna-TanjilR_27191	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Vfaba.Hedin2.R1.2g044880.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Ca_00681	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
rna-XM_004486146.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
evm.model.Chr06.1629	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.1g447880.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Psat1g177280.1	Pisum sativum Cameor genome v1a	Pisum sativum
Ca_21999.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
jg48601.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vigun06g156300.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Ca_02203.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
rna-KK1_017248	Cajanus cajan Asha genome v1.0	Cajanus cajan
Ca_03402	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
rna-KK1_004586	Cajanus cajan Asha genome v1.0	Cajanus cajan
evm.model.Chr03.1083	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
rna-XM_014651710.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Psat4g003640.1	Pisum sativum Cameor genome v1a	Pisum sativum
rna-XM_004507598.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
rna-XM_014661524.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Vigun03g442700.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
jg39094.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vfaba.Tiffany.R1.1g367440.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
rna-TanjilR_26415	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Phvul.006G144500.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Phvul.003G082600.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Cr_22186.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
LR48_mrnaVigan01g323300	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-LR48_Vigan09g195900	gene-LR48_Vigan09g195900_Va_Jingnong6_v1.1	Vigna angularis	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan09g195900	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-protein	Vigna angularis	polypeptide
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1	Vigna angularis	polypeptide

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-start_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24572817..24572819	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-start_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24572817..24572819	Vigna angularis	start_codon

The following exon feature(s) are a part of this mRNA:

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24573648..24575759	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24573648..24575759	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24575917..24576051	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24575917..24576051	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24576201..24576289	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24576201..24576289	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24576348..24576436	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24576348..24576436	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24576493..24576588	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24576493..24576588	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24576629..24576714	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24576629..24576714	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24576777..24577419	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24576777..24577419	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24577523..24577600	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24577523..24577600	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24577651..24577835	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24577651..24577835	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24577965..24578295	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24577965..24578295	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24578548..24578646	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24578548..24578646	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24578727..24578828	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24578727..24578828	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24578956..24579068	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24578956..24579068	Vigna angularis	intron
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24579213..24579289	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24579213..24579289	Vigna angularis	intron

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS21101	CDS21101_Va_Jingnong6_v1.1	Vigna angularis	CDS

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-stop_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24579473..24579475	LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1-stop_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24579473..24579475	Vigna angularis	stop_codon

Homology

[Close]

BLAST of LR48_mrnaVigan09g195900 vs. DB:Swiss
Match: EHD2_ARATH (EH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=EHD2 PE=1 SV=1)

HSP 1 Score: 805.823 bits (2080), Expect = 0.000e+0
Identity = 387/528 (73.30%), Postives = 446/528 (84.47%), Query Frame = 1

Query:  952 KEYQEWFNLADSDGDGRISGNEATKFFALSNLSRSQLKQLWALADVKRQGFLGFPEFVTAMQLVSLAQAGQELNSDILKTQVDKENIKPPTLEGLDALVAQKSLIITTPH-ELNGIAQPQGFPTNRWFGSKSSKK-------------------------------------TNTDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHVGPEPTTDRFVVVMSGPDERSIPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITLVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVITSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPMDEDSVSPLVQDLFEKEQNDLLADLIDIPKKACDRRINEFVKRARSAKIHAHIISHLKKEMPAIMGKAKAQQRLTDNLEEEFAKVQREFHLPAGDFPSVENFREVLSGYSIDKFEKLKPKMIQAVDDMLGYEIPELLKKFRNPYD 2421
            K Y+EWFN+ADSDGDGR+SGN+ATKFFA+S LSR +LKQ+WA+AD KRQGFLG  EF+TAM+LVSLAQ G E+ SD+LK  +D ++++ P LEGL+ +V+++ +  T    E N + +PQ      WF SKS  K                                     T++DFDAKPMVMLLGQYSTGKTTFIKHLL CDYPGAH+GPEPTTDRFVV MSGPDER+IPGNT+AV ADMPF+GLT+FGG+FLSKF+CSQMPHP+LD+ITLVDTPGVLSGEKQR QRSYDFTGV+SWFA+KCD+ILLLFDPHKLDISDEFKRVITSLRG++DKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEV RVYIGSFNDKP++E +V P+ ++LFEKEQNDLLADL+D+PKKACDR+INEFVKRARSAKI+A+I+SHLKKEMPA+MGK+KAQQRL DNLEEEF KVQREFHLPAGDFPSVE+FREVL GY+IDKFEKLKPKMIQAVDDMLGY+IP+LLKKFRNPYD
Sbjct:   18 KIYKEWFNIADSDGDGRVSGNDATKFFAMSKLSRQELKQVWAVADSKRQGFLGLSEFITAMKLVSLAQEGHEITSDLLKGSIDMKSVELPVLEGLENVVSKQKVSKTNVDVEDNVVTKPQVTAKTPWFKSKSIIKPQVNVVTIVDGLKRLYTEKLKPLEVTYRFNDFASPVLTSSDFDAKPMVMLLGQYSTGKTTFIKHLLGCDYPGAHIGPEPTTDRFVVAMSGPDERTIPGNTMAVQADMPFNGLTSFGGAFLSKFECSQMPHPVLDQITLVDTPGVLSGEKQRMQRSYDFTGVISWFASKCDMILLLFDPHKLDISDEFKRVITSLRGNEDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVVRVYIGSFNDKPINEVAVGPIGKELFEKEQNDLLADLMDVPKKACDRKINEFVKRARSAKINAYIMSHLKKEMPAMMGKSKAQQRLMDNLEEEFGKVQREFHLPAGDFPSVEHFREVLGGYNIDKFEKLKPKMIQAVDDMLGYDIPDLLKKFRNPYD 545

[Close]

BLAST of LR48_mrnaVigan09g195900 vs. DB:Swiss
Match: EHD1_ARATH (EH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=EHD1 PE=1 SV=1)

HSP 1 Score: 775.393 bits (2001), Expect = 0.000e+0
Identity = 382/538 (71.00%), Postives = 434/538 (80.67%), Query Frame = 1

Query:  937 TGSGPKE----YQEWFNLADSDGDGRISGNEATKFFALSNLSRSQLKQLWALADVKRQGFLGFPEFVTAMQLVSLAQAGQELNSDILKTQVDKENIKPPTLEGLDALVAQKSLIITTPH-ELNGIAQPQGFPTNRWFGSK--------------------------------------SSKKTNTDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHVGPEPTTDRFVVVMSGPDERSIPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITLVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVITSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPMDEDSVSPLVQDLFEKEQNDLLADLIDIPKKACDRRINEFVKRARSAKIHAHIISHLKKEMPAIMGKAKAQQRLTDNLEEEFAKVQREFHLPAGDFPSVENFREVLSGYSIDKFEKLKPKMIQAVDDMLGYEIPELLKKFRNPYD 2421
             GS  KE    Y+EWF  +DSDGDGRI+GN+A KFF +SNL R +LKQ+WA+AD KRQG+LGF EF+ AMQLVSLAQ G E++ ++L + VD +NI PPT+EGL  L+A+K     +    +NG        T  WF SK                                      S   TN+DFDAKPMVMLLGQYSTGKTTFIKHLL+  YPGAH+GPEPTTDRFVVVMSGPDERSIPGNT+AV ADMPFSGLTTFG +FLSKF+CSQMPHPLL+ +T VDTPGVLSGEKQRTQR+YDFTGV SWFA+KCDLILLLFDPHKLD+SDEFKRVI+SLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSF+DKP++E +  P+ ++LFEKEQ+DLLADL DIPKKACDRRINEFVKRAR+AKIHA+IISHLKKEMPAIMGKAKAQQ+L DNLE+EF KVQRE HLP GDFP+V++FREVLSGY+IDKFEKLKPKM+Q VDDMLGY+IPELLK F+NPYD
Sbjct:    8 AGSCSKENQMIYKEWFEFSDSDGDGRITGNDAIKFFTMSNLPRPELKQIWAIADSKRQGYLGFKEFIVAMQLVSLAQTGHEISHEVLISDVDFKNINPPTMEGLGVLMAKKKHSSKSSDPNMNGSPAADTSLTAHWFSSKSSKKISLSSVTSIVDGLKRLYIQKLKPLEVAYRFNDFVSPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLKSTYPGAHIGPEPTTDRFVVVMSGPDERSIPGNTVAVQADMPFSGLTTFGTAFLSKFECSQMPHPLLEHVTFVDTPGVLSGEKQRTQRAYDFTGVTSWFASKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFSDKPINEAATGPIGRELFEKEQDDLLADLKDIPKKACDRRINEFVKRARAAKIHAYIISHLKKEMPAIMGKAKAQQKLIDNLEDEFGKVQREHHLPKGDFPNVDHFREVLSGYNIDKFEKLKPKMLQTVDDMLGYDIPELLKNFKNPYD 545

[Close]

BLAST of LR48_mrnaVigan09g195900 vs. DB:Swiss
Match: EHD1_RAT (EH domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ehd1 PE=1 SV=1)

HSP 1 Score: 428.328 bits (1100), Expect = 3.005e-140
Identity = 205/394 (52.03%), Postives = 269/394 (68.27%), Query Frame = 1

Query: 1228 EGLDALVAQKSLIITTPHELNGIAQPQGFPTNRWFGSKSSKKTNTDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHVGPEPTTDRFVVVMSGPDERSIPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITLVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVITSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPMDEDSVSPLVQDLFEKEQNDLLADLIDIPKKACDRRINEFVKRARSAKIHAHIISHLKKEMPAIMGKAKAQQRLTDNLEEEFAKVQREFHLPAGDFPSVENFREVLSGYSIDKFEKLKPKMIQAVDDMLGYEIPELLKKFR 2409
            EGL  L AQK L +   +  +    P                 + DFD KPMV+L+GQYSTGKTTFI+HL+  D+PG  +GPEPTTD F+ VM GP E  +PGN + VD   PF  L  FG +FL++F C+Q+P+P+LD I+++DTPG+LSGEKQR  R YDF  V+ WFA + D I+LLFD HKLDISDEF  VI +L+ H+DKIRVVLNKADQ++TQQLMRVYGALMWSLGK++NTPEV RVYIGSF   P+    + P  + LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HA+IIS LKKEMP + GK   ++ L +NL E + K++RE  + +GDFPS+   +E+L      KF+ LKPK++  VDDML  +I  L+   R
Sbjct:   23 EGLRQLYAQKLLPLEEHYRFHEFHSPA--------------LEDADFDNKPMVLLVGQYSTGKTTFIRHLIEQDFPGMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRPFRKLNAFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLGKIINTPEVVRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQKIEREHQISSGDFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLMVMVR 398

[Close]

BLAST of LR48_mrnaVigan09g195900 vs. DB:Swiss
Match: EHD1_MOUSE (EH domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ehd1 PE=1 SV=1)

HSP 1 Score: 428.328 bits (1100), Expect = 3.005e-140
Identity = 205/394 (52.03%), Postives = 269/394 (68.27%), Query Frame = 1

Query: 1228 EGLDALVAQKSLIITTPHELNGIAQPQGFPTNRWFGSKSSKKTNTDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHVGPEPTTDRFVVVMSGPDERSIPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITLVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVITSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPMDEDSVSPLVQDLFEKEQNDLLADLIDIPKKACDRRINEFVKRARSAKIHAHIISHLKKEMPAIMGKAKAQQRLTDNLEEEFAKVQREFHLPAGDFPSVENFREVLSGYSIDKFEKLKPKMIQAVDDMLGYEIPELLKKFR 2409
            EGL  L AQK L +   +  +    P                 + DFD KPMV+L+GQYSTGKTTFI+HL+  D+PG  +GPEPTTD F+ VM GP E  +PGN + VD   PF  L  FG +FL++F C+Q+P+P+LD I+++DTPG+LSGEKQR  R YDF  V+ WFA + D I+LLFD HKLDISDEF  VI +L+ H+DKIRVVLNKADQ++TQQLMRVYGALMWSLGK++NTPEV RVYIGSF   P+    + P  + LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HA+IIS LKKEMP + GK   ++ L +NL E + K++RE  + +GDFPS+   +E+L      KF+ LKPK++  VDDML  +I  L+   R
Sbjct:   23 EGLRQLYAQKLLPLEEHYRFHEFHSPA--------------LEDADFDNKPMVLLVGQYSTGKTTFIRHLIEQDFPGMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRPFRKLNAFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLGKIINTPEVVRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQKIEREHQISSGDFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLMVMVR 398

[Close]

BLAST of LR48_mrnaVigan09g195900 vs. DB:Swiss
Match: EHD1_PONAB (EH domain-containing protein 1 OS=Pongo abelii OX=9601 GN=EHD1 PE=2 SV=1)

HSP 1 Score: 427.172 bits (1097), Expect = 6.866e-140
Identity = 205/394 (52.03%), Postives = 268/394 (68.02%), Query Frame = 1

Query: 1228 EGLDALVAQKSLIITTPHELNGIAQPQGFPTNRWFGSKSSKKTNTDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHVGPEPTTDRFVVVMSGPDERSIPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITLVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVITSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPMDEDSVSPLVQDLFEKEQNDLLADLIDIPKKACDRRINEFVKRARSAKIHAHIISHLKKEMPAIMGKAKAQQRLTDNLEEEFAKVQREFHLPAGDFPSVENFREVLSGYSIDKFEKLKPKMIQAVDDMLGYEIPELLKKFR 2409
            EGL  L AQK L +   +  +    P                 + DFD KPMV+L+GQYSTGKTTFI+HL+  D+PG  +GPEPTTD F+ VM GP E  +PGN + VD   PF  L  FG +FL++F C+Q+P+P+LD I+++DTPG+LSGEKQR  R YDF  V+ WFA + D I+LLFD HKLDISDEF  VI +L+ H+DKIRVVLNKADQ++TQQLMRVYGALMWSLGK++NTPEV RVYIGSF   P+    + P  + LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HA+IIS LKKEMP + GK   ++ L +NL E + K++RE  +  GDFPS+   +E+L      KF+ LKPK++  VDDML  +I  L+   R
Sbjct:   23 EGLRQLYAQKLLPLEEHYRFHEFHSPA--------------LEDADFDNKPMVLLVGQYSTGKTTFIRHLIEQDFPGMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRPFRKLNAFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLGKIINTPEVVRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQKIEREHQISPGDFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLMVMVR 398

[Close]

BLAST of LR48_mrnaVigan09g195900 vs. DB:Swiss
Match: EHD1_HUMAN (EH domain-containing protein 1 OS=Homo sapiens OX=9606 GN=EHD1 PE=1 SV=2)

HSP 1 Score: 427.172 bits (1097), Expect = 6.866e-140
Identity = 205/394 (52.03%), Postives = 268/394 (68.02%), Query Frame = 1

Query: 1228 EGLDALVAQKSLIITTPHELNGIAQPQGFPTNRWFGSKSSKKTNTDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHVGPEPTTDRFVVVMSGPDERSIPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITLVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVITSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPMDEDSVSPLVQDLFEKEQNDLLADLIDIPKKACDRRINEFVKRARSAKIHAHIISHLKKEMPAIMGKAKAQQRLTDNLEEEFAKVQREFHLPAGDFPSVENFREVLSGYSIDKFEKLKPKMIQAVDDMLGYEIPELLKKFR 2409
            EGL  L AQK L +   +  +    P                 + DFD KPMV+L+GQYSTGKTTFI+HL+  D+PG  +GPEPTTD F+ VM GP E  +PGN + VD   PF  L  FG +FL++F C+Q+P+P+LD I+++DTPG+LSGEKQR  R YDF  V+ WFA + D I+LLFD HKLDISDEF  VI +L+ H+DKIRVVLNKADQ++TQQLMRVYGALMWSLGK++NTPEV RVYIGSF   P+    + P  + LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HA+IIS LKKEMP + GK   ++ L +NL E + K++RE  +  GDFPS+   +E+L      KF+ LKPK++  VDDML  +I  L+   R
Sbjct:   23 EGLRQLYAQKLLPLEEHYRFHEFHSPA--------------LEDADFDNKPMVLLVGQYSTGKTTFIRHLIEQDFPGMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRPFRKLNAFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLGKIINTPEVVRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQKIEREHQISPGDFPSLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLMVMVR 398

[Close]

BLAST of LR48_mrnaVigan09g195900 vs. DB:Swiss
Match: EHD1_BOVIN (EH domain-containing protein 1 OS=Bos taurus OX=9913 GN=EHD1 PE=1 SV=1)

HSP 1 Score: 426.402 bits (1095), Expect = 1.747e-139
Identity = 204/394 (51.78%), Postives = 268/394 (68.02%), Query Frame = 1

Query: 1228 EGLDALVAQKSLIITTPHELNGIAQPQGFPTNRWFGSKSSKKTNTDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHVGPEPTTDRFVVVMSGPDERSIPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITLVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVITSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPMDEDSVSPLVQDLFEKEQNDLLADLIDIPKKACDRRINEFVKRARSAKIHAHIISHLKKEMPAIMGKAKAQQRLTDNLEEEFAKVQREFHLPAGDFPSVENFREVLSGYSIDKFEKLKPKMIQAVDDMLGYEIPELLKKFR 2409
            EGL  L AQK L +   +  +    P                 + DFD KPMV+L+GQYSTGKTTFI+HL+  D+PG  +GPEPTTD F+ VM GP E  +PGN + VD   PF  L  FG +FL++F C+Q+P+P+LD I+++DTPG+LSGEKQR  R YDF  V+ WFA + D I+LLFD HKLDISDEF  VI +L+ H+DKIRVVLNKADQ++TQQLMRVYGALMWSLGK++NTPEV RVYIGSF   P+    + P  + LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HA+IIS LKKEMP + GK   ++ L +NL E + K++RE  +  GDFP++   +E+L      KF+ LKPK++  VDDML  +I  L+   R
Sbjct:   23 EGLRQLYAQKLLPLEEHYRFHEFHSPA--------------LEDADFDNKPMVLLVGQYSTGKTTFIRHLIEQDFPGMRIGPEPTTDSFIAVMHGPTEGVVPGNALVVDPRRPFRKLNAFGNAFLNRFMCAQLPNPVLDSISIIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKIRVVLNKADQIETQQLMRVYGALMWSLGKIINTPEVVRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFKDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPNVFGKESKKKELVNNLGEIYQKIEREHQISPGDFPNLRKMQELLQTQDFSKFQALKPKLLDTVDDMLANDIARLMVMVR 398

[Close]

BLAST of LR48_mrnaVigan09g195900 vs. DB:Swiss
Match: EHD4_HUMAN (EH domain-containing protein 4 OS=Homo sapiens OX=9606 GN=EHD4 PE=1 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 5.545e-136
Identity = 196/347 (56.48%), Postives = 253/347 (72.91%), Query Frame = 1

Query: 1357 NTDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHVGPEPTTDRFVVVMSGPDERSIPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITLVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVITSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPMDEDSVSPLVQDLFEKEQNDLLADLIDIPKKACDRRINEFVKRARSAKIHAHIISHLKKEMPAIMGKAKAQQRLTDNLEEEFAKVQREFHLPAGDFPSVENFREVLSGYSIDKFEKLKPKMIQAVDDMLGYEIPELL 2397
            + DF+ KPM++L+GQYSTGKTTFI++LL  D+PG  +GPEPTTD F+ VM G  E S PGN + VD   PF  L+ FG +FL++F CSQ+P+ +L  I+++D+PG+LSGEKQR  R YDF  V+ WFA + D I+LLFD HKLDISDEF   I + RG DDKIRVVLNKADQVDTQQLMRVYGALMWSLGKV+NTPEV RVYIGSF  +P+         + LFE E  DL  D+  +P+KA  R++N+ +KRAR AK+HA+IIS+LKKEMP++ GK   ++ L   L E + ++QRE+ + AGDFP V+  +E L  Y   KF  LKPK+I+AVD+ML  +I  L+
Sbjct:   55 DADFENKPMILLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFGNAFLNRFMCSQLPNQVLKSISVIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWAQPLQNTD----NRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKEMPSVFGKENKKRELISRLPEIYIQLQREYQISAGDFPEVKAMQEQLENYDFTKFHSLKPKLIEAVDNMLSNKISPLM 397

[Close]

BLAST of LR48_mrnaVigan09g195900 vs. DB:Swiss
Match: EHD4_MOUSE (EH domain-containing protein 4 OS=Mus musculus OX=10090 GN=Ehd4 PE=1 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 3.147e-135
Identity = 196/347 (56.48%), Postives = 252/347 (72.62%), Query Frame = 1

Query: 1357 NTDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHVGPEPTTDRFVVVMSGPDERSIPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITLVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVITSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPMDEDSVSPLVQDLFEKEQNDLLADLIDIPKKACDRRINEFVKRARSAKIHAHIISHLKKEMPAIMGKAKAQQRLTDNLEEEFAKVQREFHLPAGDFPSVENFREVLSGYSIDKFEKLKPKMIQAVDDMLGYEIPELL 2397
            + DF+ KPM++L+GQYSTGKTTFI++LL  D+PG  +GPEPTTD F+ VM G  E S PGN + VD   PF  L+ FG +FL++F CSQ+P+ +L  I+++D+PG+LSGEKQR  R YDF  V+ WFA + D I+LLFD HKLDISDEF   I + RG DDKIRVVLNKADQVDTQQLMRVYGALMWSLGKV+NTPEV RVYIGSF  +P+         + LFE E  DL  D+  +P+KA  R++N+ +KRAR AK+HA+IIS+LKKEMP + GK   ++ L   L E + ++QRE+ + AGDFP V+  +E L  Y   KF  LKPK+I+AVD+ML  +I  L+
Sbjct:   55 DADFENKPMILLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDSFIAVMYGETEGSTPGNALVVDPKKPFRKLSRFGNAFLNRFMCSQLPNQVLKSISIIDSPGILSGEKQRISRGYDFCQVLQWFAERVDRIILLFDAHKLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVINTPEVLRVYIGSFWAQPLQNTD----NRRLFEAEAQDLFRDIQSLPQKAAVRKLNDLIKRARLAKVHAYIISYLKKEMPNMFGKENKKRELIYRLPEIYVQLQREYQISAGDFPEVKAMQEQLENYDFTKFHSLKPKLIEAVDNMLTNKISSLM 397

[Close]

BLAST of LR48_mrnaVigan09g195900 vs. DB:Swiss
Match: EHD3_HUMAN (EH domain-containing protein 3 OS=Homo sapiens OX=9606 GN=EHD3 PE=1 SV=2)

HSP 1 Score: 412.535 bits (1059), Expect = 4.176e-134
Identity = 190/351 (54.13%), Postives = 258/351 (73.50%), Query Frame = 1

Query: 1357 NTDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHVGPEPTTDRFVVVMSGPDERSIPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITLVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVITSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVSRVYIGSFNDKPMDEDSVSPLVQDLFEKEQNDLLADLIDIPKKACDRRINEFVKRARSAKIHAHIISHLKKEMPAIMGKAKAQQRLTDNLEEEFAKVQREFHLPAGDFPSVENFREVLSGYSIDKFEKLKPKMIQAVDDMLGYEIPELLKKFR 2409
            + DFD KPMV+L+GQYSTGKTTFI++LL  D+PG  +GPEPTTD F+ VM G  E  IPGN + VD   PF  L  FG +FL++F C+Q+P+P+L+ I+++DTPG+LSGEKQR  R YDF  V+ WFA + D I+LLFD HKLDISDEF  VI +L+ H+DK+RVVLNKADQ++TQQLMRVYGALMWSLGK++NTPEV RVYIGSF   P+    + P  + LFE E+ DL  D+  +P+ A  R++N+ +KRAR AK+HA+IIS LKKEMP++ GK   ++ L +NL E + +++RE  +  GDFP+++  ++ L      KF+ LK K+++ VDDML ++I +L+   R
Sbjct:   52 DADFDNKPMVLLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDSFIAVMQGDMEGIIPGNALVVDPKKPFRKLNAFGNAFLNRFVCAQLPNPVLESISVIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKMRVVLNKADQIETQQLMRVYGALMWSLGKIVNTPEVIRVYIGSFWSHPL----LIPDNRKLFEAEEQDLFRDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPSVFGKDNKKKELVNNLAEIYGRIEREHQISPGDFPNLKRMQDQLQAQDFSKFQPLKSKLLEVVDDMLAHDIAQLMVLVR 398

The following BLAST results are available for this feature:

BLAST of LR48_mrnaVigan09g195900 vs. DB:Swiss

BLAST of LR48_mrnaVigan09g195900 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10


Match Name	E-value	Identity	Description
EHD2_ARATH	0.000e+0	73.30	EH domain-containing protein 2 OS=Arabidopsis thal...	[more]
EHD1_ARATH	0.000e+0	71.00	EH domain-containing protein 1 OS=Arabidopsis thal...	[more]
EHD1_RAT	3.005e-140	52.03	EH domain-containing protein 1 OS=Rattus norvegicu...	[more]
EHD1_MOUSE	3.005e-140	52.03	EH domain-containing protein 1 OS=Mus musculus OX=...	[more]
EHD1_PONAB	6.866e-140	52.03	EH domain-containing protein 1 OS=Pongo abelii OX=...	[more]
EHD1_HUMAN	6.866e-140	52.03	EH domain-containing protein 1 OS=Homo sapiens OX=...	[more]
EHD1_BOVIN	1.747e-139	51.78	EH domain-containing protein 1 OS=Bos taurus OX=99...	[more]
EHD4_HUMAN	5.545e-136	56.48	EH domain-containing protein 4 OS=Homo sapiens OX=...	[more]
EHD4_MOUSE	3.147e-135	56.48	EH domain-containing protein 4 OS=Mus musculus OX=...	[more]
EHD3_HUMAN	4.176e-134	54.13	EH domain-containing protein 3 OS=Homo sapiens OX=...	[more]

InterPro

Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 730..750
None	No IPR available	GENE3D	1.10.268.20		coord: 451..790 e-value: 0.0 score: 477.7
None	No IPR available	GENE3D	3.40.50.300		coord: 462..690 e-value: 0.0 score: 477.7
None	No IPR available	GENE3D	1.10.238.10		coord: 313..409 e-value: 1.3E-25 score: 90.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..157
None	No IPR available	CDD	cd09913	EHD	coord: 461..705 e-value: 0.0 score: 415.904
IPR000261	EH domain	SMART	SM00027	eh_3	coord: 309..400 e-value: 1.9E-10 score: 50.7
IPR000261	EH domain	PFAM	PF12763	EF-hand_4	coord: 319..381 e-value: 1.0E-7 score: 31.7
IPR000261	EH domain	PROSITE	PS50031	EH	coord: 316..410 score: 13.303
IPR000261	EH domain	CDD	cd00052	EH	coord: 320..386 e-value: 4.72798E-24 score: 93.8234
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 319..347 e-value: 0.093 score: 21.8 coord: 353..381 e-value: 1.3 score: 16.9
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 315..350 score: 10.887
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 352..384 score: 8.349
IPR040990	Domain of unknown function DUF5600	PFAM	PF18150	DUF5600	coord: 697..799 e-value: 3.0E-35 score: 120.9
IPR022812	Dynamin superfamily	PFAM	PF00350	Dynamin_N	coord: 462..621 e-value: 8.7E-11 score: 42.1
IPR030381	Dynamin-type guanine nucleotide-binding (G) domain	PROSITE	PS51718	G_DYNAMIN_2	coord: 456..692 score: 33.127
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 456..729
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 318..387

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr_9-CM003379.1:24572817..24579475+
coding sequence from alignment at Chr_9-CM003379.1:24572817..24579475+

mRNA sequence

>LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g195900; organism=Vigna angularis; type=mRNA; length=6659bp
ATGGACATCAAAGAATTATGGTACGGTTTAGGAGGTCAGTCTGTGGACCC
AGATAGGTTAGAATTATTAACTGATGATAGGGGTGCCATGCACATGTTGA
ACATTGCTaggttaaatgatgaagttcatCTGTATGTGGTTCATAATATG
ATGGAACcagaaataatagaaatgatTGATTGGGTTGGTGGTCAAGTTGA
TGATGAAGGTCATGTTGCAACACAAGTGAAGGAGGTTGAGGTTGTTGGTG
ATGGTCAACTTGGAACAGAAATGGTGGAGGGTGAGGGGGATGCCCATACT
GAAGTTCGAACAGAAATGGTGGAGGGTGAGGGTGATGCCCATGAGGGTGA
AGGTGATGGGTATGAGGGTGATGGTGAGGATCATACTGCAGTAGGAACAA
AAATGGTTGAGGGTCAGGGTGATGCCCATGAGGGTGAAGGTGATGGGTAT
GAGGTTGATGGTGAGGAGCATAGTGATGTTGGTACAAAAATGGTTGAGGG
TGAGGGTGATGCCCATGAGGGTGATGGTCAGGATGTTGATGTCCATGAGG
TTGAGGATGGTGAGGTCCATCATGTAGAGGAAGCTGAGGTACATGATGTA
GATGACTTTGAGCTAGAGGATTTAGGAGAGGATGATGATGTAGAGGACAG
TGAGGGTGATGATGTACATGAGGCAGAGACTGAGGACGAAGATGTAGATG
TCAGTGAAGGAAGTCTAATTGATGTCAGCGTGCATTGTGACATTGGGACT
TGTAAAGGAAATGTGGGAGAACAAGCTTCCAGTGCATTACTTCAGTGTGA
ACGGTCAACAGATAATGAATTTATTCATGATGTCTGTGGGTTGTCTGAAA
ATTaactgaatatttttattaaacaaatgttaattaaaatatcttgaATA
TGTCAGGGTCTTTTGCCAGCTATCCAAGATCTTCTACCTGGTGTAGAACA
AAGATTTTGTGTTAggcatttatattcaaacttcAGAAAAAAATTTCCTG
GAAAAAACTTTAAACGTCTCATGTGACGGGCAGCAACAGCCACACACCCA
CAACAATGGGAGGCTAAAATGAGGAATATTAAAGACATCAATTTAGACGC
ATTTAAATATTTGCTTGCCATCCCACCTAGGTATGTATTACATCTTCCAG
TGCATTAAgtcttataattatttacatattgGCTTGCCATGACACATACT
TGACTAGTTATATTCACTTATCCCAGGTTTTGGTCAAGATCTAGATTCAC
TTCTAGATCACAATGTGACACTCTTGTGAACAACATGTGTGAGGGCTTTA
ATAGTGTGCTAGTTGATAGTAGGTCTAAGCCTATTATTAGCATGTTAGAA
GACATAAGGGTTTACATAATGAAGAGATGGGCTGCCAACAGGACAAAGAT
CACATCATATCAAGGTTCAATCTGTCCCAAGGTTTTTAACAGATTTCAGA
AGGAGTCCTGGTTAACTAGATATTGGTTACCAAGGTAACTTTTATGATGT
GTCTTTCCATTCATGTTAACTTTGTTTCCATTTATAGTGATCCATCTAAT
TGTGTTTTGAATTGTGTATTACATACAGGTGgttaagagaaaaattattt
gaagtgaaACATCTTTCAGAATTTGGTGAGCAATTTGTTGTGAATGTTGA
TAACATGGACTGCACATGTAGAAAATGGGCAATTACTGGCATCCCGTGTA
CTCATGCCATCACTacaatgaaatttttgaatataaatgcaGAAGAATAC
ATTGGGCATTGGTTTAGGAAGTCTACTTATGAAGAGACTTACAACACAAT
AATTAACCCTATCAATGGACAACATGTGTGGGATGTTACACCCTATTCAG
ATATATTACCACCAAAGAAGAGGACAATGCCAGGAAGACCCAAGAAGAAA
CGAAGACTAGAGGATtgggagttgaagaagaataaCAGTGAATTAAGAAA
GGGTGGGCATAGGAAAAGATGTGCCATCTGCAAAGAACTTGGACACAACA
GAAAAGGTTGTCCACAAAGACCTCCAACAGTAGAGGTTCCTACTGCCCAA
TCTGTACAAGTCACCCAACCTCCAGCAACAGATGTTCCTATTACTCACCA
ATGATCTAATGTCCTGAACTTATTTATATGATGTATTGTTATGTTGTATT
TTGAACACAGTCTGTACTGAACTTATTTGCTCTATCAATTTGAACAAAGT
CTGTTATGATGTATTGTTATAATGTATTTTGGATATGTAAGACAATGTTG
TTATCATTTTGAACAGCTTCTGTTATGATGTAAGACAATGTTATTAGAAA
GTGATTATTGCCCAATTTCGTTCTTAGGGCAACCCCAGAATTTTTTCCCC
TTGTTTTTAGGGGTTCTCGCAATACGAAACACTGCATTCTGACCACAGAG
GCATGTTGGTTTTGCATCATAACTCCACACACTGCCACTTCTATGTTGCA
TGGTCGAACCTAAACATTTGCAAGAGGAAGATGAACGAGACATCCTTACC
ACCACCTCAACACCACAATATACAAACTAGAGGACCAAGGGAgaatttaa
acctaaaataaaatattattaaatttattaaatattattataaaatcaat
attttttataattttgaaaatagttatttaaaaatattgaagtaataaaa
attagtgaaaatgaatatttaattaatgatacAGTATGGTGACAAGAAAG
GAATATGAGCGACAAGTGGACGGAAACTGCCAGGTCACAATGGCGCCCAA
ATTCAAAAGTTTGAAACAGCAACCACGACAAAGGGTATCTAATGCAGACC
TGTCCACACAATCATCCCGTGGATAAGCAATCGAACAGTCTCACATTAAA
CTATATCCATCTCATGGGTCCCGCTcctaatcaaaattaaatcacaCCGA
AAGTGATCACAGCTTCAAAATTCATCCTTAAATTCAAAATCAGGCTCCCG
AACCGATATTTGAAACTGATAAGAGCCCGTTCTGGCTTTTGAATTCCAAC
GCCGAATTGAATCGAGAGGATTTTGTCGATCGATTTCCAAAGATGAAGAC
CGGGTCGGGTCCCAAAGAGTATCAGGAATGGTTCAATTTGGCTGATTCAG
GTTAGTTCAACACTCTTTNNNNNNNNNNNNNNNNNNNNTTGGCTGATTCA
GGTTAGTTCAACGCTCTTTCTCACTCCACAGTTTCAGAttgaaaagattt
tttttgATTTGGTGTCCGGCATTGGAATGTGGCAGACGGAGATGGACGAA
TCTCTGGAAACGAGGCCACTAAGTTCTTCGCTCTCTCCAACTTGTCACGC
TCGCAACTCAAACAGCTCTGGGCTCTCGCTGATGTCAAACGACAGGGGTT
TTTGGGTTTTCCGGAGTTCGTTACTGCAATGCAGGTTATACCTTTTAACT
GTCGTTTCGTTTCATTTGTTGTCGTTCTGGTTTCTGGCTTTTGAATTCAA
AATTCTTCTTTGTAATAAAACAGTTGGTTTCGCTGGCGCAAGCAGGGCAA
GAACTTAACTCAGATATTCTCAAAACTCAAGGTGAGTGCGTATTTTCATA
ATCTTCAGAAATTAAGATGAGCAAATACATCATACATGTAAGTTCATCTC
TCTGTTTTTATTGATTACAGTTGATAAGGAAAATATTAAACCTCCTACAT
TGGAAGGACTCGATGCTTTAGTAGCAGTAAGTTGTCTTTTTCGTCTCATC
TTatgctttatttatttgtagATCGTTTTAATTAACTCTATTGATTCCTT
TTTCTTATTGATTTTTTCCCAGCAAAAGAGTTTAATAATTACTACCCCAC
ATGAACTAAATGGTTAGATATGTAACTCTTTTTAGCTAGTTATATGGTTT
TATTCtttgatttatatttgattGGATTGTTTAACCTGTATTATGTAGGG
ATTGCTCAGCCACAAGGGTTTCCAACTAATCGGTGGTTTGGTTCAAAATC
TTCAAAGAAAGTGAGTTCTGTTATTTACTTTCAGATCTTGAGGTTTGTCC
AGGGTTTCATGACATCTGAATATCTATTTTACATGCTTCTTTGCAATGAA
TTCCATTTTCTTCAATTAGTCGTTAGTACTGGTTATTCATTATTTTGAAG
ATGAAATAACCATTTCCTTTTATCTGATCCTTCTGTGATAGAGAGTCAAT
AGAGATATTTTACTTGAATGGGTTTTAAATAGATCTACTCAAATAAGGGC
TGCGACTATAATCTTCGTTCAGTCTTATGGTACAAATGTTCCGTTGGAGT
GATTAAATGATAATGTAGAATGTGTCTTTGTGATTATTTCTTCTCAAGTT
ACTGCATGTACTCTTTCTTTATGTTATTTGCTgctaaatattttctaatt
ataataGTTTGTTTTGTTAGTTACCTCTCAATTCAGTTACATCAATCATT
GATGGCTTGAAGAGATTATATATCGAGAGGTTAAAGCCCTTGGAAGTTAC
CTACCGATATAATGATTTTGTGTCTCCATTGTTGGTAAGGACAAACTATT
CAGTAGCATTTATTTGTGGGCGCATTGTACTTTCTCCACTTAGGATGTCG
TATACCACATAAATATGGCTATAACTTAGAATATCTTGATTTTTCCCTTT
CAGACCAACACTGATTTTGATGCTAAACCCATGGTCATGCTCCTGGGTCA
ATATTCAACAGGAAAAACtacatttataaaacatttgttAAGATGTGACT
ATCCAGGTAGGTTAAGTTTCGGTCAATCTAGGTGCTGGCTTATAAAATTG
ATGACTTATTGATTCTTGATCCTAACTCTTACAGGAGCACATGTTGGACC
AGAGCCTACCACTGATAGATTTGTTGTTGTCATGGTAAGAGAAGTTTCCT
TTATGTTCTTCTATTTTATTGCCTCTGGAAGTCAATAAaggcaaaaaaga
aaaatatatgaaaagaaatagaaatCACAACTTTGCTGTTGCCAAATTTT
GTTTCCATAAATTCTGTTGTGTTCTGATAATGCTCGTGGTGTTTGttttg
aaactttatttatttatagtctGGACCTGATGAGAGGAGTATTCCTGGGA
ATACCATAGCTGTTGATGCTGACATGCCTTTCAGCGGCTTGACAACATTT
GGAGGTTCTTTTTTATCAAAGTTCCAATGTTCTCAAATGCCACATCCTGT
GAGTCTTATTTatacttgaaaaaaataataattttattattttcaatcat
GACAATTACATTTTCCTTATTTCTCTATTTATAACAatctaatcttttaa
aaaaggaaaataagaaaacaatgaattaaaaaataacctaGAAGATCATA
CTCCTATTTTCTCTAACTAAGAagattttatagatattttctctaactaa
gaatattttatagatattttccCTTGTTAAGAAGATTTTATAGGTATTTC
CTCGAATTACAACATTTATATTTCAAAGTCCAATGACTTTGTCATTTCTT
GTGCTTACATAAGGAATTTTTTCTTTCAGCTGTTAGATGAAATAACACTT
GTGGACACTCCTGGAGTGTTGTCTGGAGAGAAACAGAGGACTCAACGAAG
CTATGATTTCACTGGTGTCGTGTCTTGGTTTGCTGCAAAATGTGATCTCA
TTCTTCTTCTGTTTGATCCTCATAAACTAGACATCAGCGATGAGTTCAAA
CGCGTAATCACATCTTTACGTGGTCATGATGACAAGATACGAGTGGTTTT
GAATAAGGCAGATCAAGTTGATACTCAACAAGTAAGACAATAATATCAAC
AATGTTACCtggtttattatatttattatatttattatgtaacTTTTTGT
GTACTTACATGCCTAATCGCAATGTTGTAGCTTATGAGAGTGTATGGAGC
ATTGATGTGGTCATTGGGGAAAGTTCTAAATACTCCCGAAGTTTCACGTG
TATACATTGGGTAGGTCTGTTATCTTTCAAAAATGTCGCACGTTCCACCG
TTTTTCGTGTGAAAGTATTTAACCGTTCTTTCAAATGTGTACTCCCTTAC
TTGACTTAACAGCTCATTTAACGATAAGCCTATGGATGAAGACTCCGTAA
GTCCATTAGTGCAGGATCTGTTTGAGAAGGAACAAAATGATCTGCTTGCA
GATTTGATAGATATTCCAAAGAAGGCATGCGATCGCCGGGTATGTTTCTT
ACTTTCATATTATTTGTCTAAGTTGAAGATTGAGTTTCATTATATGTATG
CCTCTACCTCATGTCAActctaatatatttatttctgtTTAAAATGGTGC
AGATCAACGAATTTGTGAAACGTGCTAGATCTGCTAAAATTCATGCGCAT
ATAATTAGCCACCTTAAGAAGGAGATGCCTGCAATAATGGGCAAAGCCAA
GGCTCAACAGAGACTTACTGACAATCTCGAGGAAGAATTTGCAAAGGTCC
TTCATCCATCACTTCCTCGTACTTTGGGTGCTTAATTTTCAGGTACTTAC
AGttcaatgtttttgaaaaacagGTCCAAAGAGAGTTTCATCTACCTGCT
GGTGATTTTCCCAGTGTTGAAAACTTCAGAGAAGTTTTGAGTGGTTATAG
CATCGACAAATTTGAGAAACTAAAGCCCAAAATGATTCAAGCCGTGGATG
ACATGCTTGGATATGAAATACCAGAGCTTTTAAAGAAATTCAGAAATCCt
tatgattaa

protein sequence of LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1

>LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=807bp
MDIKELWYGLGGQSVDPDRLELLTDDRGAMHMLNIARLNDEVHLYVVHNM
MEPEIIEMIDWVGGQVDDEGHVATQVKEVEVVGDGQLGTEMVEGEGDAHT
EVRTEMVEGEGDAHEGEGDGYEGDGEDHTAVGTKMVEGQGDAHEGEGDGY
EVDGEEHSDVGTKMVEGEGDAHEGDGQDVDVHEVEDGEVHHVEEAEVHDV
DDFELEDLGEDDDVEDSEGDDVHEAETEDEDVDVSEGSLIDVSVHCDIGT
CKGNVGEQASSALLQCERSTDNEFIHDAPEPIFETDKSPFWLLNSNAELN
REDFVDRFPKMKTGSGPKEYQEWFNLADSDGDGRISGNEATKFFALSNLS
RSQLKQLWALADVKRQGFLGFPEFVTAMQLVSLAQAGQELNSDILKTQVD
KENIKPPTLEGLDALVAQKSLIITTPHELNGIAQPQGFPTNRWFGSKSSK
KTNTDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHVGPEPTTDRFVV
VMSGPDERSIPGNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEI
TLVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILLLFDPHKLDISDE
FKRVITSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEV
SRVYIGSFNDKPMDEDSVSPLVQDLFEKEQNDLLADLIDIPKKACDRRIN
EFVKRARSAKIHAHIISHLKKEMPAIMGKAKAQQRLTDNLEEEFAKVQRE
FHLPAGDFPSVENFREVLSGYSIDKFEKLKPKMIQAVDDMLGYEIPELLK
KFRNPYD

mRNA from alignment at Chr_9-CM003379.1:24572817..24579475+

Legend: polypeptidestart_codonexonCDSintronstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

>LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g195900; organism=Vigna angularis; type=mRNA; length=6659bp; location=Sequence derived from: Chr_9-CM003379.1:24572817..24579475+ (Vigna angularis
ATGGACATCAAAGAATTATGGTACGGTTTAGGAGGTCAGTCTGTGGACCC
AGATAGGTTAGAATTATTAACTGATGATAGGGGTGCCATGCACATGTTGA
ACATTGCTaggttaaatgatgaagttcatCTGTATGTGGTTCATAATATG
ATGGAACcagaaataatagaaatgatTGATTGGGTTGGTGGTCAAGTTGA
TGATGAAGGTCATGTTGCAACACAAGTGAAGGAGGTTGAGGTTGTTGGTG
ATGGTCAACTTGGAACAGAAATGGTGGAGGGTGAGGGGGATGCCCATACT
GAAGTTCGAACAGAAATGGTGGAGGGTGAGGGTGATGCCCATGAGGGTGA
AGGTGATGGGTATGAGGGTGATGGTGAGGATCATACTGCAGTAGGAACAA
AAATGGTTGAGGGTCAGGGTGATGCCCATGAGGGTGAAGGTGATGGGTAT
GAGGTTGATGGTGAGGAGCATAGTGATGTTGGTACAAAAATGGTTGAGGG
TGAGGGTGATGCCCATGAGGGTGATGGTCAGGATGTTGATGTCCATGAGG
TTGAGGATGGTGAGGTCCATCATGTAGAGGAAGCTGAGGTACATGATGTA
GATGACTTTGAGCTAGAGGATTTAGGAGAGGATGATGATGTAGAGGACAG
TGAGGGTGATGATGTACATGAGGCAGAGACTGAGGACGAAGATGTAGATG
TCAGTGAAGGAAGTCTAATTGATGTCAGCGTGCATTGTGACATTGGGACT
TGTAAAGGAAATGTGGGAGAACAAGCTTCCAGTGCATTACTTCAGTGTGA
ACGGTCAACAGATAATGAATTTATTCATGATGTCTGTGGGTTGTCTGAAA
ATTaactgaatatttttattaaacaaatgttaattaaaatatcttgaATA
TGTCAGGGTCTTTTGCCAGCTATCCAAGATCTTCTACCTGGTGTAGAACA
AAGATTTTGTGTTAggcatttatattcaaacttcAGAAAAAAATTTCCTG
GAAAAAACTTTAAACGTCTCATGTGACGGGCAGCAACAGCCACACACCCA
CAACAATGGGAGGCTAAAATGAGGAATATTAAAGACATCAATTTAGACGC
ATTTAAATATTTGCTTGCCATCCCACCTAGGTATGTATTACATCTTCCAG
TGCATTAAgtcttataattatttacatattgGCTTGCCATGACACATACT
TGACTAGTTATATTCACTTATCCCAGGTTTTGGTCAAGATCTAGATTCAC
TTCTAGATCACAATGTGACACTCTTGTGAACAACATGTGTGAGGGCTTTA
ATAGTGTGCTAGTTGATAGTAGGTCTAAGCCTATTATTAGCATGTTAGAA
GACATAAGGGTTTACATAATGAAGAGATGGGCTGCCAACAGGACAAAGAT
CACATCATATCAAGGTTCAATCTGTCCCAAGGTTTTTAACAGATTTCAGA
AGGAGTCCTGGTTAACTAGATATTGGTTACCAAGGTAACTTTTATGATGT
GTCTTTCCATTCATGTTAACTTTGTTTCCATTTATAGTGATCCATCTAAT
TGTGTTTTGAATTGTGTATTACATACAGGTGgttaagagaaaaattattt
gaagtgaaACATCTTTCAGAATTTGGTGAGCAATTTGTTGTGAATGTTGA
TAACATGGACTGCACATGTAGAAAATGGGCAATTACTGGCATCCCGTGTA
CTCATGCCATCACTacaatgaaatttttgaatataaatgcaGAAGAATAC
ATTGGGCATTGGTTTAGGAAGTCTACTTATGAAGAGACTTACAACACAAT
AATTAACCCTATCAATGGACAACATGTGTGGGATGTTACACCCTATTCAG
ATATATTACCACCAAAGAAGAGGACAATGCCAGGAAGACCCAAGAAGAAA
CGAAGACTAGAGGATtgggagttgaagaagaataaCAGTGAATTAAGAAA
GGGTGGGCATAGGAAAAGATGTGCCATCTGCAAAGAACTTGGACACAACA
GAAAAGGTTGTCCACAAAGACCTCCAACAGTAGAGGTTCCTACTGCCCAA
TCTGTACAAGTCACCCAACCTCCAGCAACAGATGTTCCTATTACTCACCA
ATGATCTAATGTCCTGAACTTATTTATATGATGTATTGTTATGTTGTATT
TTGAACACAGTCTGTACTGAACTTATTTGCTCTATCAATTTGAACAAAGT
CTGTTATGATGTATTGTTATAATGTATTTTGGATATGTAAGACAATGTTG
TTATCATTTTGAACAGCTTCTGTTATGATGTAAGACAATGTTATTAGAAA
GTGATTATTGCCCAATTTCGTTCTTAGGGCAACCCCAGAATTTTTTCCCC
TTGTTTTTAGGGGTTCTCGCAATACGAAACACTGCATTCTGACCACAGAG
GCATGTTGGTTTTGCATCATAACTCCACACACTGCCACTTCTATGTTGCA
TGGTCGAACCTAAACATTTGCAAGAGGAAGATGAACGAGACATCCTTACC
ACCACCTCAACACCACAATATACAAACTAGAGGACCAAGGGAgaatttaa
acctaaaataaaatattattaaatttattaaatattattataaaatcaat
attttttataattttgaaaatagttatttaaaaatattgaagtaataaaa
attagtgaaaatgaatatttaattaatgatacAGTATGGTGACAAGAAAG
GAATATGAGCGACAAGTGGACGGAAACTGCCAGGTCACAATGGCGCCCAA
ATTCAAAAGTTTGAAACAGCAACCACGACAAAGGGTATCTAATGCAGACC
TGTCCACACAATCATCCCGTGGATAAGCAATCGAACAGTCTCACATTAAA
CTATATCCATCTCATGGGTCCCGCTcctaatcaaaattaaatcacaCCGA
AAGTGATCACAGCTTCAAAATTCATCCTTAAATTCAAAATCAGGCTCCCG
AACCGATATTTGAAACTGATAAGAGCCCGTTCTGGCTTTTGAATTCCAAC
GCCGAATTGAATCGAGAGGATTTTGTCGATCGATTTCCAAAGATGAAGAC
CGGGTCGGGTCCCAAAGAGTATCAGGAATGGTTCAATTTGGCTGATTCAG
GTTAGTTCAACACTCTTTNNNNNNNNNNNNNNNNNNNNTTGGCTGATTCA
GGTTAGTTCAACGCTCTTTCTCACTCCACAGTTTCAGAttgaaaagattt
tttttgATTTGGTGTCCGGCATTGGAATGTGGCAGACGGAGATGGACGAA
TCTCTGGAAACGAGGCCACTAAGTTCTTCGCTCTCTCCAACTTGTCACGC
TCGCAACTCAAACAGCTCTGGGCTCTCGCTGATGTCAAACGACAGGGGTT
TTTGGGTTTTCCGGAGTTCGTTACTGCAATGCAGGTTATACCTTTTAACT
GTCGTTTCGTTTCATTTGTTGTCGTTCTGGTTTCTGGCTTTTGAATTCAA
AATTCTTCTTTGTAATAAAACAGTTGGTTTCGCTGGCGCAAGCAGGGCAA
GAACTTAACTCAGATATTCTCAAAACTCAAGGTGAGTGCGTATTTTCATA
ATCTTCAGAAATTAAGATGAGCAAATACATCATACATGTAAGTTCATCTC
TCTGTTTTTATTGATTACAGTTGATAAGGAAAATATTAAACCTCCTACAT
TGGAAGGACTCGATGCTTTAGTAGCAGTAAGTTGTCTTTTTCGTCTCATC
TTatgctttatttatttgtagATCGTTTTAATTAACTCTATTGATTCCTT
TTTCTTATTGATTTTTTCCCAGCAAAAGAGTTTAATAATTACTACCCCAC
ATGAACTAAATGGTTAGATATGTAACTCTTTTTAGCTAGTTATATGGTTT
TATTCtttgatttatatttgattGGATTGTTTAACCTGTATTATGTAGGG
ATTGCTCAGCCACAAGGGTTTCCAACTAATCGGTGGTTTGGTTCAAAATC
TTCAAAGAAAGTGAGTTCTGTTATTTACTTTCAGATCTTGAGGTTTGTCC
AGGGTTTCATGACATCTGAATATCTATTTTACATGCTTCTTTGCAATGAA
TTCCATTTTCTTCAATTAGTCGTTAGTACTGGTTATTCATTATTTTGAAG
ATGAAATAACCATTTCCTTTTATCTGATCCTTCTGTGATAGAGAGTCAAT
AGAGATATTTTACTTGAATGGGTTTTAAATAGATCTACTCAAATAAGGGC
TGCGACTATAATCTTCGTTCAGTCTTATGGTACAAATGTTCCGTTGGAGT
GATTAAATGATAATGTAGAATGTGTCTTTGTGATTATTTCTTCTCAAGTT
ACTGCATGTACTCTTTCTTTATGTTATTTGCTgctaaatattttctaatt
ataataGTTTGTTTTGTTAGTTACCTCTCAATTCAGTTACATCAATCATT
GATGGCTTGAAGAGATTATATATCGAGAGGTTAAAGCCCTTGGAAGTTAC
CTACCGATATAATGATTTTGTGTCTCCATTGTTGGTAAGGACAAACTATT
CAGTAGCATTTATTTGTGGGCGCATTGTACTTTCTCCACTTAGGATGTCG
TATACCACATAAATATGGCTATAACTTAGAATATCTTGATTTTTCCCTTT
CAGACCAACACTGATTTTGATGCTAAACCCATGGTCATGCTCCTGGGTCA
ATATTCAACAGGAAAAACtacatttataaaacatttgttAAGATGTGACT
ATCCAGGTAGGTTAAGTTTCGGTCAATCTAGGTGCTGGCTTATAAAATTG
ATGACTTATTGATTCTTGATCCTAACTCTTACAGGAGCACATGTTGGACC
AGAGCCTACCACTGATAGATTTGTTGTTGTCATGGTAAGAGAAGTTTCCT
TTATGTTCTTCTATTTTATTGCCTCTGGAAGTCAATAAaggcaaaaaaga
aaaatatatgaaaagaaatagaaatCACAACTTTGCTGTTGCCAAATTTT
GTTTCCATAAATTCTGTTGTGTTCTGATAATGCTCGTGGTGTTTGttttg
aaactttatttatttatagtctGGACCTGATGAGAGGAGTATTCCTGGGA
ATACCATAGCTGTTGATGCTGACATGCCTTTCAGCGGCTTGACAACATTT
GGAGGTTCTTTTTTATCAAAGTTCCAATGTTCTCAAATGCCACATCCTGT
GAGTCTTATTTatacttgaaaaaaataataattttattattttcaatcat
GACAATTACATTTTCCTTATTTCTCTATTTATAACAatctaatcttttaa
aaaaggaaaataagaaaacaatgaattaaaaaataacctaGAAGATCATA
CTCCTATTTTCTCTAACTAAGAagattttatagatattttctctaactaa
gaatattttatagatattttccCTTGTTAAGAAGATTTTATAGGTATTTC
CTCGAATTACAACATTTATATTTCAAAGTCCAATGACTTTGTCATTTCTT
GTGCTTACATAAGGAATTTTTTCTTTCAGCTGTTAGATGAAATAACACTT
GTGGACACTCCTGGAGTGTTGTCTGGAGAGAAACAGAGGACTCAACGAAG
CTATGATTTCACTGGTGTCGTGTCTTGGTTTGCTGCAAAATGTGATCTCA
TTCTTCTTCTGTTTGATCCTCATAAACTAGACATCAGCGATGAGTTCAAA
CGCGTAATCACATCTTTACGTGGTCATGATGACAAGATACGAGTGGTTTT
GAATAAGGCAGATCAAGTTGATACTCAACAAGTAAGACAATAATATCAAC
AATGTTACCtggtttattatatttattatatttattatgtaacTTTTTGT
GTACTTACATGCCTAATCGCAATGTTGTAGCTTATGAGAGTGTATGGAGC
ATTGATGTGGTCATTGGGGAAAGTTCTAAATACTCCCGAAGTTTCACGTG
TATACATTGGGTAGGTCTGTTATCTTTCAAAAATGTCGCACGTTCCACCG
TTTTTCGTGTGAAAGTATTTAACCGTTCTTTCAAATGTGTACTCCCTTAC
TTGACTTAACAGCTCATTTAACGATAAGCCTATGGATGAAGACTCCGTAA
GTCCATTAGTGCAGGATCTGTTTGAGAAGGAACAAAATGATCTGCTTGCA
GATTTGATAGATATTCCAAAGAAGGCATGCGATCGCCGGGTATGTTTCTT
ACTTTCATATTATTTGTCTAAGTTGAAGATTGAGTTTCATTATATGTATG
CCTCTACCTCATGTCAActctaatatatttatttctgtTTAAAATGGTGC
AGATCAACGAATTTGTGAAACGTGCTAGATCTGCTAAAATTCATGCGCAT
ATAATTAGCCACCTTAAGAAGGAGATGCCTGCAATAATGGGCAAAGCCAA
GGCTCAACAGAGACTTACTGACAATCTCGAGGAAGAATTTGCAAAGGTCC
TTCATCCATCACTTCCTCGTACTTTGGGTGCTTAATTTTCAGGTACTTAC
AGttcaatgtttttgaaaaacagGTCCAAAGAGAGTTTCATCTACCTGCT
GGTGATTTTCCCAGTGTTGAAAACTTCAGAGAAGTTTTGAGTGGTTATAG
CATCGACAAATTTGAGAAACTAAAGCCCAAAATGATTCAAGCCGTGGATG
ACATGCTTGGATATGAAATACCAGAGCTTTTAAAGAAATTCAGAAATCCt
tatgattaa

Coding sequence (CDS) from alignment at Chr_9-CM003379.1:24572817..24579475+

>LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g195900_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g195900; organism=Vigna angularis; type=CDS; length=2424bp; location=Sequence derived from: Chr_9-CM003379.1:24572817..24579475+ (Vigna angularis
ATGGACATCAAAGAATTATGGTACGGTTTAGGAGGTCAGTCTGTGGACCC
AGATAGGTTAGAATTATTAACTGATGATAGGGGTGCCATGCACATGTTGA
ACATTGCTaggttaaatgatgaagttcatCTGTATGTGGTTCATAATATG
ATGGAACcagaaataatagaaatgatTGATTGGGTTGGTGGTCAAGTTGA
TGATGAAGGTCATGTTGCAACACAAGTGAAGGAGGTTGAGGTTGTTGGTG
ATGGTCAACTTGGAACAGAAATGGTGGAGGGTGAGGGGGATGCCCATACT
GAAGTTCGAACAGAAATGGTGGAGGGTGAGGGTGATGCCCATGAGGGTGA
AGGTGATGGGTATGAGGGTGATGGTGAGGATCATACTGCAGTAGGAACAA
AAATGGTTGAGGGTCAGGGTGATGCCCATGAGGGTGAAGGTGATGGGTAT
GAGGTTGATGGTGAGGAGCATAGTGATGTTGGTACAAAAATGGTTGAGGG
TGAGGGTGATGCCCATGAGGGTGATGGTCAGGATGTTGATGTCCATGAGG
TTGAGGATGGTGAGGTCCATCATGTAGAGGAAGCTGAGGTACATGATGTA
GATGACTTTGAGCTAGAGGATTTAGGAGAGGATGATGATGTAGAGGACAG
TGAGGGTGATGATGTACATGAGGCAGAGACTGAGGACGAAGATGTAGATG
TCAGTGAAGGAAGTCTAATTGATGTCAGCGTGCATTGTGACATTGGGACT
TGTAAAGGAAATGTGGGAGAACAAGCTTCCAGTGCATTACTTCAGTGTGA
ACGGTCAACAGATAATGAATTTATTCATGATGCTCCCGAACCGATATTTG
AAACTGATAAGAGCCCGTTCTGGCTTTTGAATTCCAACGCCGAATTGAAT
CGAGAGGATTTTGTCGATCGATTTCCAAAGATGAAGACCGGGTCGGGTCC
CAAAGAGTATCAGGAATGGTTCAATTTGGCTGATTCAGACGGAGATGGAC
GAATCTCTGGAAACGAGGCCACTAAGTTCTTCGCTCTCTCCAACTTGTCA
CGCTCGCAACTCAAACAGCTCTGGGCTCTCGCTGATGTCAAACGACAGGG
GTTTTTGGGTTTTCCGGAGTTCGTTACTGCAATGCAGTTGGTTTCGCTGG
CGCAAGCAGGGCAAGAACTTAACTCAGATATTCTCAAAACTCAAGTTGAT
AAGGAAAATATTAAACCTCCTACATTGGAAGGACTCGATGCTTTAGTAGC
ACAAAAGAGTTTAATAATTACTACCCCACATGAACTAAATGGGATTGCTC
AGCCACAAGGGTTTCCAACTAATCGGTGGTTTGGTTCAAAATCTTCAAAG
AAAACCAACACTGATTTTGATGCTAAACCCATGGTCATGCTCCTGGGTCA
ATATTCAACAGGAAAAACtacatttataaaacatttgttAAGATGTGACT
ATCCAGGAGCACATGTTGGACCAGAGCCTACCACTGATAGATTTGTTGTT
GTCATGtctGGACCTGATGAGAGGAGTATTCCTGGGAATACCATAGCTGT
TGATGCTGACATGCCTTTCAGCGGCTTGACAACATTTGGAGGTTCTTTTT
TATCAAAGTTCCAATGTTCTCAAATGCCACATCCTCTGTTAGATGAAATA
ACACTTGTGGACACTCCTGGAGTGTTGTCTGGAGAGAAACAGAGGACTCA
ACGAAGCTATGATTTCACTGGTGTCGTGTCTTGGTTTGCTGCAAAATGTG
ATCTCATTCTTCTTCTGTTTGATCCTCATAAACTAGACATCAGCGATGAG
TTCAAACGCGTAATCACATCTTTACGTGGTCATGATGACAAGATACGAGT
GGTTTTGAATAAGGCAGATCAAGTTGATACTCAACAACTTATGAGAGTGT
ATGGAGCATTGATGTGGTCATTGGGGAAAGTTCTAAATACTCCCGAAGTT
TCACGTGTATACATTGGCTCATTTAACGATAAGCCTATGGATGAAGACTC
CGTAAGTCCATTAGTGCAGGATCTGTTTGAGAAGGAACAAAATGATCTGC
TTGCAGATTTGATAGATATTCCAAAGAAGGCATGCGATCGCCGGATCAAC
GAATTTGTGAAACGTGCTAGATCTGCTAAAATTCATGCGCATATAATTAG
CCACCTTAAGAAGGAGATGCCTGCAATAATGGGCAAAGCCAAGGCTCAAC
AGAGACTTACTGACAATCTCGAGGAAGAATTTGCAAAGGTCCAAAGAGAG
TTTCATCTACCTGCTGGTGATTTTCCCAGTGTTGAAAACTTCAGAGAAGT
TTTGAGTGGTTATAGCATCGACAAATTTGAGAAACTAAAGCCCAAAATGA
TTCAAGCCGTGGATGACATGCTTGGATATGAAATACCAGAGCTTTTAAAG
AAATTCAGAAATCCttatgattaa

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000261	EH_dom
IPR002048	EF_hand_dom
IPR040990	DUF5600
IPR022812	Dynamin
IPR030381	G_DYNAMIN_dom
IPR027417	P-loop_NTPase
IPR011992	EF-hand-dom_pair

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0005509	calcium ion binding
GO:0005525	GTP binding

Search form

LR48_mrnaVigan09g195900