LR48_mrnaVigan09g199500

Transcript Overview
NameLR48_mrnaVigan09g199500
Unique NameLR48_mrnaVigan09g199500_Va_Jingnong6_v1.1
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length4770
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr_9-CM003379.1supercontigChr_9-CM003379.1:24855394..24860163 +Vigna angularis Jingnong 6 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna angularis Jingnong 6 genome v1.12020-05-19
InterProScan: Vigna angularis Jingnong 6 genome v1.12020-05-21
BLAST: V. angularis Jingnong 6 genome v1.12020-05-21
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ascaR153Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ascaR228Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
asasL003Vigna angularis Jingnong 6 genome v1.1Vigna angularis
anasL0242Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0484Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0644Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anasL0902Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ascaiR209Cicer arietinum ICC 4958 genome v2Cicer arietinum
asccR0268Cajanus cajan Asha genome v1.0Cajanus cajan
asccR0277Cajanus cajan Asha genome v1.0Cajanus cajan
ascrR204Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
aspsR177Pisum sativum Cameor genome v1aPisum sativum
aspsR205Pisum sativum Cameor genome v1aPisum sativum
aspsR206Pisum sativum Cameor genome v1aPisum sativum
aspvR222Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
asvuR155Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
asvuR173Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
astifR182Vicia faba cv. Tiffany genome v1.0Vicia faba
astifR225Vicia faba cv. Tiffany genome v1.0Vicia faba
asvfhR184Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR210Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvfhR233Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
asvrvR136Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvrvR180Vigna radiata cv. VC1973A genome v6.0Vigna radiata
asvssR183Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvssR225Vicia sativa cv. Studenica genome v1.0Vicia sativa
asvuaR140Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
asvuaR167Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
ascanR139Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
ascanR211Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.1g445280.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.1g364960.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_07892Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cr_00720.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_014661436.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004486279.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-KK1_017195Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_02173.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Phvul.006G140900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat1g173600.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_31747Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun06g152700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_17849Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg39177.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr06.1597Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
gene-LR48_Vigan09g199500gene-LR48_Vigan09g199500_Va_Jingnong6_v1.1Vigna angularisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g199500LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-proteinVigna angularispolypeptide
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1Vigna angularispolypeptide


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-start_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24855394..24855396LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-start_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24855394..24855396Vigna angularisstart_codon


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24855394..24855446LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24855394..24855446Vigna angularisexon
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24855713..24855768LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24855713..24855768Vigna angularisexon
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24856531..24856709LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24856531..24856709Vigna angularisexon
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24856991..24857056LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24856991..24857056Vigna angularisexon
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857184..24857309LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857184..24857309Vigna angularisexon
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857399..24857474LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857399..24857474Vigna angularisexon
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857775..24857835LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857775..24857835Vigna angularisexon
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857910..24857968LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857910..24857968Vigna angularisexon
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24858065..24858172LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24858065..24858172Vigna angularisexon
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24858508..24858730LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24858508..24858730Vigna angularisexon
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24859154..24859364LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24859154..24859364Vigna angularisexon
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24859548..24859820LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24859548..24859820Vigna angularisexon
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24859972..24860163LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-exon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24859972..24860163Vigna angularisexon


The following intron feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24855447..24855712LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24855447..24855712Vigna angularisintron
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24855769..24856530LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24855769..24856530Vigna angularisintron
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24856710..24856990LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24856710..24856990Vigna angularisintron
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857057..24857183LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857057..24857183Vigna angularisintron
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857310..24857398LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857310..24857398Vigna angularisintron
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857475..24857774LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857475..24857774Vigna angularisintron
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857836..24857909LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857836..24857909Vigna angularisintron
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857969..24858064LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24857969..24858064Vigna angularisintron
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24858173..24858507LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24858173..24858507Vigna angularisintron
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24858731..24859153LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24858731..24859153Vigna angularisintron
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24859365..24859547LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24859365..24859547Vigna angularisintron
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24859821..24859971LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-intron-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24859821..24859971Vigna angularisintron


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS21127CDS21127_Va_Jingnong6_v1.1Vigna angularisCDS


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-stop_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24860161..24860163LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1-stop_codon-Chr_9-CM003379.1_Va_Jingnong6_v1.1-1589992784:24860161..24860163Vigna angularisstop_codon


Homology
[Close]
BLAST of LR48_mrnaVigan09g199500 vs. DB:Swiss
Match: TADA2_ORYSJ (Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica OX=39947 GN=ADA2 PE=2 SV=2)

HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0
Identity = 339/576 (58.85%), Postives = 410/576 (71.18%), Query Frame = 1 
Query:    1 MGRSRGNFHHADEDPNQRSRRKKXXXXXXX---XXXXXXXXXXXXXXXXLYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWTEVAEHVGTKNKESCIEHYKNIYLSSPFFPVPDMSHVVGKNRKELLAMAKGQGEDKKGISMGDLSLKAESPFSPSRAKVEDSHKAGTANRLSSNLNSELDSGPSGNTHSAAGANQKASNVTRGKGGPGVIKMEDSQIDRDFGGKKPTSSGNEGPSLVELSGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDSXXXXXXXXXXXXXYSKRLDERKRRKDFILERNLLYPNPLEKDLTAEEKAMCRKYDIFMRFHSKEDHDELLRTMLFEHRSWKKIQELKEARLAGCRNSADAEKYISLXXXXXXXXXXXXXXXXXSAQVGPSNQGIPNALTSP------------------DSAGKDLSARPAGPATSSSVNEMDAIGYNGADLLSEAEKRLCCELRLSPATYLKMQEQLSLQILAGTVSAKSDAHQLFKLDAMKVDRVYDMLIKK 1665
            MGRSRG  +  D++ N RS+R++ A+SG+      +   G G G GKKALYHCNYCNKDI+GKIRIKC+ CPDFDLC+ECFSVGAEVTPH+SNHPYRVMDNLSFPLICPDWNAD+EILLLEGIEMYGLGNW EVAEHVGTK K  CI+HY   Y++SP +P+PDMSHV GKNRKELLAMAK QGE KK +  GDL+ K ESPFSP R KVED+   G A R  S              H A GAN+KASNV + K G  V K+ED  +DR  G KKP  S +EGPSL ELSGYN+KR EFDPEYDNDAEQ LAEMEFK+TDSE +RELKLRVLR+Y  RLDERKRRK+FILERNLL+PNPLEKDLT E+K +  +Y +FMRF SKE+H+ L+R++L E +  ++IQEL+E R AGCR  A+A+  I +++KR+ E      + KES Q+  SN  + +    P                  DS G+D S +  G A +   ++ D +G+ GA+LLS +EK LCC+ RL P  YLKMQE L  +I  G+V+ K DAH LFK+D  KVD VYDM+ KK
Sbjct:    1 MGRSRGVPNSGDDETNHRSKRRRVASSGDAPDSLSAACGGAGEGGGKKALYHCNYCNKDISGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNHPYRVMDNLSFPLICPDWNADEEILLLEGIEMYGLGNWAEVAEHVGTKTKAQCIDHYTTAYMNSPCYPLPDMSHVNGKNRKELLAMAKVQGESKK-VLPGDLTPKDESPFSPPRVKVEDALGEGLAGRSPS--------------HIAGGANKKASNVGQFKDGANVAKVEDGHVDRSIGVKKPRYSADEGPSLTELSGYNSKRHEFDPEYDNDAEQALAEMEFKETDSETDRELKLRVLRIYLSRLDERKRRKEFILERNLLFPNPLEKDLTNEDKEVYHRYKVFMRFLSKEEHEALVRSVLEERKIRRRIQELQECRSAGCRTLAEAK--IHIEQKRKKEHEVNAQKAKESGQL-LSNTKVVHKTNRPMKIESDGNLDQKKGGASLDSTGRD-SPKTTGHAGTKHWDDWDIVGFPGAELLSTSEKNLCCQNRLLPNHYLKMQEVLMQEIFKGSVAKKEDAHVLFKVDPAKVDNVYDMVTKK 557
[Close]
BLAST of LR48_mrnaVigan09g199500 vs. DB:Swiss
Match: TAD2B_ARATH (Transcriptional adapter ADA2b OS=Arabidopsis thaliana OX=3702 GN=ADA2B PE=1 SV=1)

HSP 1 Score: 576.63 bits (1485), Expect = 0.000e+0
Identity = 323/558 (57.89%), Postives = 395/558 (70.79%), Query Frame = 1 
Query:    1 MGRSRGNFHHADEDPNQRSRRKKXXXXXXXXXXXXXXXXXXXXXXXLYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWTEVAEHVGTKNKESCIEHYKNIYLSSPFFPVPDMSHVVGKNRKELLAMAKGQGEDKKGISMGDLSLKAESPFSPSRAKVEDSHKAGTANRLSSNLNSELDSGPSGNTHSAAGANQKASNVTRGKGGPGVIKMEDSQIDRDFGGKKPTSSGNEGPSLVELSGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDSXXXXXXXXXXXXXYSKRLDERKRRKDFILERNLLYPNPLEKDLTAEEKAMCRKYDIFMRFHSKEDHDELLRTMLFEHRSWKKIQELKEARLAGCRNSADAEKYISLXXXXXXXXXXXXXXXXXSAQVGPSNQGIPNALTSPDSAGKDLSARPAGPATSSSVNEMDAIGYNGADLLSEAEKRLCCELRLSPATYLKMQEQLSLQILAGTVSAKSDAHQLFKLDAMKVDRVYDMLIKKGIG 1674
            MGRSRGNF +  EDP QR+R+KKNAA+ EN ES +   GA  G K  Y+C+YC KDITGKIRIKCA+CPDFDLCIEC SVGAE+TPHK +HPYRVM NL+FPLICPDW+ADDE+LLLEG+E+YGLGNW EVAEHVGTK+KE C+EHY+NIYL+SPFFP+PDMSHV GKNRKEL AMAKG+ +DKK     + ++K E PFSP + KVED+ K    +R                                                  FGGKKP S+     SLVELS YN KR+EFDPEYDNDAEQLLAEMEFK+ D+ EE ELKLRVLR+YSKRLDERKRRK+FI+ERNLLYPNP EKDL+ EEK  CR+ D+FMRFHSKE+HDELLR ++ E+R  K++++LKEA++AGCR++A+AE+Y  L RKR+ E      R KES Q G                  ++ +RP   A+SS VN++D IG+  + LLSE+EKRLC E++L P  YL+MQ+ +S +I  G V+ KSDA+ LFK+D  KVDRVYDML+KKGI 
Sbjct:    1 MGRSRGNFQNF-EDPTQRTRKKKNAANVENFESTSLVPGAEGGGK--YNCDYCQKDITGKIRIKCAVCPDFDLCIECMSVGAEITPHKCDHPYRVMGNLTFPLICPDWSADDEMLLLEGLEIYGLGNWAEVAEHVGTKSKEQCLEHYRNIYLNSPFFPLPDMSHVAGKNRKELQAMAKGRIDDKK----AEQNMKEEYPFSPPKVKVEDTQKESFVDR-------------------------------------------------SFGGKKPVSTSVNN-SLVELSNYNQKREEFDPEYDNDAEQLLAEMEFKENDTPEEHELKLRVLRIYSKRLDERKRRKEFIIERNLLYPNPFEKDLSQEEKVQCRRLDVFMRFHSKEEHDELLRNVVSEYRMVKRLKDLKEAQVAGCRSTAEAERY--LGRKRKRENEEGMNRGKESGQFG--------------QIAGEMGSRPPVQASSSYVNDLDLIGFTESQLLSESEKRLCSEVKLVPPVYLQMQQVMSHEIFKGNVTKKSDAYSLFKIDPTKVDRVYDMLVKKGIA 485
[Close]
BLAST of LR48_mrnaVigan09g199500 vs. DB:Swiss
Match: TAD2A_ARATH (Transcriptional adapter ADA2a OS=Arabidopsis thaliana OX=3702 GN=ADA2A PE=1 SV=1)

HSP 1 Score: 444.121 bits (1141), Expect = 1.211e-149
Identity = 265/569 (46.57%), Postives = 361/569 (63.44%), Query Frame = 1 
Query:    1 MGRSRGNFHHADEDPNQ-RSRRKKXXXXXXXXXXXXXXXXXXXXXXX--LYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWTEVAEHVGTKNKESCIEHYKNIYLSSPFFPVPDMSHVVGKNRKELLAMAKGQGEDKKGISMGDLSLKAESPFSPSRAKVEDSHKA-GTANRLSSNLNSELDSGPSGNTHSAAGANQKASNVTRGKGGPGVIKMEDS--QIDRDFGGKKPTSSGNEGPSLVELSGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDSXXXXXXXXXXXXXYSKRLDERKRRKDFILERNLLYPNPLEKDLTAEEKAMCRKYDIFMRFHSKEDHDELLRTMLFEHRSWKKIQELKEARLAGCRNSADAEKYISLXXXXXXXXXXXXXXX-----XXSAQVGPSNQGIPNALTSPDSAGKDLSARPAGPATSSSVNEMDAIGYNGADLLSEAEKRLCCELRLSPATYLKMQEQLSLQILAGTVSAKSDAHQLFKLDAMKVDRVYDMLIKKGIG 1674
            MGRS+     A+ED N  +S+RKK +   EN+ +  +       ++   LY CNYC+KD++G +R KCA+C DFDLC+ECFSVG E+  HK++HPYRVMDNLSF L+  DWNAD+EILLLE I  YG GNW EVA+HVG+K    CI+H+ + Y+ SP FP+PD+SH +GK++ ELLAM+K      +  +   LS K E P S      E  H+A G  N +   L             SA    +K  NV + K    +IK+E +  Q DR  G KK    G + P + EL GYN KR+EF+ E+DNDAEQLLA+MEFKD+D++ ERE KL+VLR+YSKRLDERKRRK+F+LERNLLYP+  E  L+AEE+ + +   +F RF SKE+H EL++ ++ EH+  ++I++L+EAR AGCR ++DA ++I  KRK+EAEE+             + +   S +G+P  L      G D   +   P   S ++  D  G  GADLLSE EK++C E R+ P  YLKM + L+ +I  G +  KSDA+  FK++  KVDRVYDML+ KGIG
Sbjct:    1 MGRSKLASRPAEEDLNPGKSKRKKISLGPENAAASISTGIEAGNERKPGLYCCNYCDKDLSGLVRFKCAVCMDFDLCVECFSVGVELNRHKNSHPYRVMDNLSFSLVTSDWNADEEILLLEAIATYGFGNWKEVADHVGSKTTTECIKHFNSAYMQSPCFPLPDLSHTIGKSKDELLAMSKDSAVKTEIPAFVRLSPKEELPVS-----AEIKHEASGKVNEIDPPL-------------SALAGVKKKGNVPQAK---DIIKLEAAKQQSDRSVGEKKLRLPGEKVPLVTELYGYNLKREEFEIEHDNDAEQLLADMEFKDSDTDAEREQKLQVLRIYSKRLDERKRRKEFVLERNLLYPDQYEMSLSAEERKIYKSCKVFARFQSKEEHKELIKKVIEEHQILRRIEDLQEARTAGCRTTSDANRFIEEKRKKEAEESMLLRLNHGAPGSIAGKTLKSPRGLPRNL---HPFGSDSLPKVTPPRIYSGLDTWDVDGLLGADLLSETEKKMCNETRILPVHYLKMLDILTREIKKGQIKKKSDAYSFFKVEPSKVDRVYDMLVHKGIG 545
[Close]
BLAST of LR48_mrnaVigan09g199500 vs. DB:Swiss
Match: ADA2_YEAST (Transcriptional adapter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ADA2 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.421e-47
Identity = 135/509 (26.52%), Postives = 224/509 (44.01%), Query Frame = 1 
Query:  142 YHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWTEVAEHVGTKNKESCIEHYKNIYLSSPFFPVPDMSHVVGKNRKELLAMAKGQGEDKKGISMGDLSLKAESPFSPSRAKVEDSHKAGTANRLSSNLNSELDSGPSGNTHSAAGANQKASNVTRGKGGPGVIKMEDSQIDRDFGGKKPTSSGNEGPSLVELSGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDSXXXXXXXXXXXXXYSKRLDERKRRKDFILERNLLYPNPLE---KDLTAEEKAMCRKYDIFMRFHSKEDHDELLRTMLFEHRSWKKIQELKEARLAGCRNSADAEKYISLXXXXXXXXXXXXXXXXXSAQVGPSNQGIPNALTSPDSAGKDLSARPAGPATSSSVNEMDAIGYNGADLLSEAEKRLCCELRLSPATYLKMQEQLSLQIL-AGTVSAKSDAHQLFKLDAMKVDRVYDML 1656
            +HC+ C+ D T ++R+ CA+CP++DLC+ CFS G+    H+  H YR+++  S+P++CPDW AD+E+ L++G +  GLGNW ++A+H+G++ KE   EHY   YL S ++P+PD++  +   + E L   + + E  +           E P  P R                      + S PS   H   G              PG ++ E      +F  +       EGP          K   F+P    D + L  E++F   D             +Y+ RL  R  +K  + E +L+    L+   K  + E K +  +   F R  + +D +E  + +L E     +IQ+L+E R  G        KY   K+ R +        T  S   G S     +A  S     ++ S         +  +   A  Y    LLS  E++LC +L++ P  YL ++E +  ++L  G   +KS   +L  +D +K +R+YD  
Sbjct:    5 FHCDVCSADCTNRVRVSCAICPEYDLCVPCFSQGSYTGKHRPYHDYRIIETNSYPILCPDWGADEELQLIKGAQTLGLGNWQDIADHIGSRGKEEVKEHYLKYYLESKYYPIPDITQNIHVPQDEFLEQRRHRIESFR-----------ERPLEPPR--------------------KPMASVPS--CHEVQGF------------MPGRLEFET-----EFENEA------EGP---------VKDMVFEP----DDQPLDIELKFAILD-------------IYNSRLTTRAEKKRLLFENHLMDYRKLQAIDKKRSKEAKELYNRIKPFARVMTAQDFEEFSKDILEELHCRARIQQLQEWRSNGLTTLEAGLKYERDKQARISSFEKFGASTAASLSEGNSRYRSNSAHRSNAEYSQNYSENGGRKKNMTISDIQHAPDYA---LLSNDEQQLCIQLKILPKPYLVLKEVMFRELLKTGGNLSKSACRELLNIDPIKANRIYDFF 428
[Close]
BLAST of LR48_mrnaVigan09g199500 vs. DB:Swiss
Match: ADA2_CANAL (Transcriptional adapter 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=ADA2 PE=3 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.423e-34
Identity = 53/117 (45.30%), Postives = 83/117 (70.94%), Query Frame = 1 
Query:  139 LYHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWTEVAEHVGTKNKESCIEHYKNIYLSSPFFPVPDMS 489
            L+HC+ C+ D T +IRI+CA+C D+DLC+ CF+ G     HK  H Y++++  ++P+   DW AD+E+LL++G E  GLGNW ++A+H+G ++KE   EHY  IYL S  +P+P+M+
Sbjct:    7 LFHCDVCSSDCTNRIRIQCAICTDYDLCVPCFAAGLTTGDHKPWHDYQIIEQNTYPIFDRDWGADEELLLIQGCETSGLGNWADIADHIGNRSKEEVAEHYFKIYLESKDYPLPEMN 123

HSP 2 Score: 86.2705 bits (212), Expect = 1.091e-16
Identity = 84/294 (28.57%), Postives = 135/294 (45.92%), Query Frame = 1 
Query:  817 KPTSSGNEGPSLVELSGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDSXXXXXXXXXXXXXYSKRLDERKRRKDFILERNLL-YPNPL--EKDLTAEEKAMCRKYDIFMRFHSKEDHDELLRTMLFEHRSWKKIQELKEARLAGCRNSADAEKYISLXXXXXXXXXXXXXXXXXSAQVGPSNQGIPNALTSPDSAGKD-----LSARPAGPATSSSVNE-MDAIGYNGADLLSEAEKRLCCELRLSPATYLKMQEQLSLQILAGT-VSAKSDAHQLFKLDAMKVDRVYDMLIKKG 1668
            KP +S    P   E+ GY   R EFD E +N+AE  + +M F   DS  + +LKL +L +Y+ RL  R  RK  ++  +LL Y   +  +K  + EEK + +K + F+R  + ED +   R +L E +   KIQ+L+  R  G     D  K+       + +        +     G         LT+ +S   +      S +P   + S++    +D       +LLS  EK+LC  LR+ P  YL ++ QL  + +    V  K DA Q  K+D  K  ++Y+  +  G
Sbjct:  156 KPVASV---PLCHEIQGYMPGRLEFDHEAENEAEIPIKDMVFDPEDSANDIDLKLTILDIYNSRLTTRAERKRVMILNHLLDYRKNIGSDKRKSKEEKDLLKKINAFIRILTPEDFESFSRDLLTELKCRMKIQQLQTWRRNGITTLEDGAKF------EKDKVIRAAHYQRMGNGTGSGRHSQTPGLTNGNSFNGNGHRNKFSPQPEFRSKSTTARAPLDISHAADFELLSAEEKQLCATLRILPKPYLAIKNQLMREAVKNNGVLKKKDARQALKIDVNKASKIYEFFVHMG 440
[Close]
BLAST of LR48_mrnaVigan09g199500 vs. DB:Swiss
Match: ADA2_SCHPO (Transcriptional adapter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ada2 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.845e-31
Identity = 52/113 (46.02%), Postives = 76/113 (67.26%), Query Frame = 1 
Query:  142 YHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGLGNWTEVAEHVG-TKNKESCIEHYKNIYLSSPFFPV 477
            YHCN C +DIT  I I+C  C DFDLCI CF+ GA +  H  +HPYR+++  S+P+   +W AD+E+LL++  E  GLGNW ++A++VG  + KE C +HY   Y+ S  +P+
Sbjct:    6 YHCNVCAQDITRSIHIRCVECVDFDLCIPCFTSGASLGTHHPSHPYRIIETNSYPIFDENWGADEELLLIDACETLGLGNWADIADYVGNARTKEECRDHYLKTYIESDCYPL 118

HSP 2 Score: 77.411 bits (189), Expect = 8.267e-14
Identity = 89/288 (30.90%), Postives = 133/288 (46.18%), Query Frame = 1 
Query:  844 PSLVELSGYNAKRQEFDPEYDNDAEQLLAEMEFKD---TDSXXXXXXXXXXXXXYSKRLDERKRRKDFILERNLLYPNPL---EKDLTAEEKAMCRKYDIFMRFHSKEDHDELLRTMLFEHRSWKKIQELKEARLAGCRNSADAEKYISLXXXXXXXXXXXXXXXXXSAQVGPSNQGIPNALTSPDSAGKDLSARPAGPATSSSVNEMDAIGYNGADLLSEAEKRLCCELRLSPATYLKMQEQL-SLQILAGTVSAKSDAHQLFK-LDAMKVDRVYDMLIK-KGIGLP 1680
            P   E+ GY   R EFD EY N+AE  + +M F D     ++ E +LKL +L +Y+ RL  R  RK  I   NLL    L   EK ++ EE+ +  K   F R  +  D+ + + +   +    K+I +L+E R  G        KY   K ++     A  +  K+   V   NQ         D   K +  +PA P   S+  +          LLSE E+ LC +L++ P  +L ++  L S  + +     K+DA  LFK LDA KV++VYD     + IG P
Sbjct:  158 PQCHEIQGYMPGRLEFDQEYMNEAELPIKDMNFDDDLHESAKHEMQLKLTMLNIYNSRLTRRAVRKQTIFNHNLLDYRRLQANEKRMSKEERNLLNKTKAFARLLTGPDYQKFVNSYHEQITLKKQISDLQEWRQMGLTTLEQGHKYERDKTQKFLLSKASASYDKQLRHVKSFNQTTSAPFQVRD-IQKIVPRKPATPTMFSASAD--------RQLLSEDEQALCSKLQIFPKPFLALKFALISASLTSKKPFQKTDAVNLFKHLDANKVEQVYDFFHNARWIGAP 436
[Close]
BLAST of LR48_mrnaVigan09g199500 vs. DB:Swiss
Match: TAD2B_DROME (Transcriptional adapter 2B OS=Drosophila melanogaster OX=7227 GN=Ada2b PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.668e-22
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 1 
Query:  142 YHCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDN----LSFPLICPDWNADDEILLLEGIEMYGLGNWTEVAEHVGTKNKESCIEHYKNIYL 456
            Y+C  C  DI G IR+ CA C +FDLC++CF+ GAE+  H++NH Y+ MD     LS       W A +EI LL+ IE YG GNW ++++H+ TK+ E   E Y N ++
Sbjct:   11 YNCTNCQDDIQG-IRVHCAECENFDLCLQCFAAGAEIGAHQNNHSYQFMDTGTSILSVFRGKGAWTAREEIRLLDAIEQYGFGNWEDISKHIETKSAEDAKEEYVNKFV 118
[Close]
BLAST of LR48_mrnaVigan09g199500 vs. DB:Swiss
Match: TAD2B_XENLA (Transcriptional adapter 2-beta OS=Xenopus laevis OX=8355 GN=tada2b PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 9.761e-21
Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 1 
Query:  145 HCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPD----WNADDEILLLEGIEMYGLGNWTEVAEHVG-TKNKESCIEHYKNIYL 456
            +C YC  D+T  +R++C  C D +LC +CFS GAE+  H+  H Y+++D   F L  P+    W + +E LLL+ IE +G GNW ++A HVG ++     +EHY  +Y+
Sbjct:    8 YCVYCLADVTS-LRLRCTECQDIELCTDCFSAGAEIGNHRRWHGYQLVDGGRFTLWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPTEVMEHYVTMYI 115
[Close]
BLAST of LR48_mrnaVigan09g199500 vs. DB:Swiss
Match: TAD2B_PONAB (Transcriptional adapter 2-beta OS=Pongo abelii OX=9601 GN=TADA2B PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.333e-20
Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = 1 
Query:  145 HCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPD----WNADDEILLLEGIEMYGLGNWTEVAEHVG-TKNKESCIEHYKNIYL 456
            +C YC  +++  +R +C  C D +LC ECFS GAE+  H+  H Y+++D   F L  P+    W + +E LLL+ IE +G GNW ++A HVG ++  +  +EHY ++Y+
Sbjct:    8 YCVYCLAEVS-PLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115

HSP 2 Score: 58.5362 bits (140), Expect = 7.363e-8
Identity = 75/279 (26.88%), Postives = 121/279 (43.37%), Query Frame = 1 
Query:  865 GYNAKRQEFDPEYDNDAEQLLAEMEFKDTDSXXXXXXXXXXXXXYSKRLDERKRRKDFILERNLLYPNPLEKD-----------LTAEEKAMCRKYDIFMRFHSKEDHDELLRTMLFEHRSWKKIQELKEARLAGCRNSADAEKYISLXXXXXXXXXXXXXXXXXSAQVGPSNQGIPNALTSPDSAGKDLSARPAGPATSSSVNEMDAIGYNGADLLSEAEKRLCCELRLSPATYLKMQEQLSLQILAGTVSAKSDAHQLFKLDAMKVDRVYDMLIKKG 1668
            GY   R +++ EYD DAE L++ +     D + E ELK   + +Y ++L ER+RRK+   + NL+ P  L KD           +T EEK +  K     +F S ++ D+L   M  E     KI+EL+  R  G     ++ +Y             +R + KE+  +  S +G  +   S  +A ++L                      G +LLS+ EK LC  L LSPA Y+ ++  +    L       S +     LD +   R+ + L + G
Sbjct:  165 GYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLV-PAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEY--------EAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLP---------------------GFELLSDREKVLCSSLNLSPARYVTVKTIIIKDHLQKRQGIPSKSRLPSYLDKVLKKRILNFLTESG 413
[Close]
BLAST of LR48_mrnaVigan09g199500 vs. DB:Swiss
Match: TAD2B_HUMAN (Transcriptional adapter 2-beta OS=Homo sapiens OX=9606 GN=TADA2B PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 5.333e-20
Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = 1 
Query:  145 HCNYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPD----WNADDEILLLEGIEMYGLGNWTEVAEHVG-TKNKESCIEHYKNIYL 456
            +C YC  +++  +R +C  C D +LC ECFS GAE+  H+  H Y+++D   F L  P+    W + +E LLL+ IE +G GNW ++A HVG ++  +  +EHY ++Y+
Sbjct:    8 YCVYCLAEVS-PLRFRCTECQDIELCPECFSAGAEIGHHRRYHGYQLVDGGRFTLWGPEAEGGWTSREEQLLLDAIEQFGFGNWEDMAAHVGASRTPQEVMEHYVSMYI 115

HSP 2 Score: 58.5362 bits (140), Expect = 7.363e-8
Identity = 75/279 (26.88%), Postives = 121/279 (43.37%), Query Frame = 1 
Query:  865 GYNAKRQEFDPEYDNDAEQLLAEMEFKDTDSXXXXXXXXXXXXXYSKRLDERKRRKDFILERNLLYPNPLEKD-----------LTAEEKAMCRKYDIFMRFHSKEDHDELLRTMLFEHRSWKKIQELKEARLAGCRNSADAEKYISLXXXXXXXXXXXXXXXXXSAQVGPSNQGIPNALTSPDSAGKDLSARPAGPATSSSVNEMDAIGYNGADLLSEAEKRLCCELRLSPATYLKMQEQLSLQILAGTVSAKSDAHQLFKLDAMKVDRVYDMLIKKG 1668
            GY   R +++ EYD DAE L++ +     D + E ELK   + +Y ++L ER+RRK+   + NL+ P  L KD           +T EEK +  K     +F S ++ D+L   M  E     KI+EL+  R  G     ++ +Y             +R + KE+  +  S +G  +   S  +A ++L                      G +LLS+ EK LC  L LSPA Y+ ++  +    L       S +     LD +   R+ + L + G
Sbjct:  165 GYMPLRDDYEIEYDQDAETLISGLSVNYDDDDVEIELKRAHVDMYVRKLKERQRRKNIARDYNLV-PAFLGKDKKEKEKALKRKITKEEKELRLKLRPLYQFMSCKEFDDLFENMHKEKMLRAKIRELQRYRRNGITKMEESAEY--------EAARHKREKRKENKNLAGSKRGKEDGKDSEFAAIENLP---------------------GFELLSDREKVLCSSLNLSPARYVTVKTIIIKDHLQKRQGIPSKSRLPSYLDKVLKKRILNFLTESG 413
The following BLAST results are available for this feature:
BLAST of LR48_mrnaVigan09g199500 vs. DB:Swiss
Analysis Date: 2020-05-21 (BLAST: V. angularis Jingnong 6 genome v1.1)
Total hits: 10
Match NameE-valueIdentityDescription
TADA2_ORYSJ0.000e+058.85Transcriptional adapter ADA2 OS=Oryza sativa subsp... [more]
TAD2B_ARATH0.000e+057.89Transcriptional adapter ADA2b OS=Arabidopsis thali... [more]
TAD2A_ARATH1.211e-14946.57Transcriptional adapter ADA2a OS=Arabidopsis thali... [more]
ADA2_YEAST6.421e-4726.52Transcriptional adapter 2 OS=Saccharomyces cerevis... [more]
ADA2_CANAL1.423e-3445.30Transcriptional adapter 2 OS=Candida albicans (str... [more]
ADA2_SCHPO2.845e-3146.02Transcriptional adapter 2 OS=Schizosaccharomyces p... [more]
TAD2B_DROME1.668e-2244.04Transcriptional adapter 2B OS=Drosophila melanogas... [more]
TAD2B_XENLA9.761e-2139.45Transcriptional adapter 2-beta OS=Xenopus laevis O... [more]
TAD2B_PONAB5.333e-2038.53Transcriptional adapter 2-beta OS=Pongo abelii OX=... [more]
TAD2B_HUMAN5.333e-2038.53Transcriptional adapter 2-beta OS=Homo sapiens OX=... [more]
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InterPro
Analysis Name: InterProScan: Vigna angularis Jingnong 6 genome v1.1
Date Performed: 2020-05-21
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 44..89
e-value: 1.1E-11
score: 54.8
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 46..88
e-value: 1.7E-9
score: 37.2
IPR000433Zinc finger, ZZ-typePROSITEPS01357ZF_ZZ_1coord: 50..77
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 48..91
score: 10.959
IPR001005SANT/Myb domainSMARTSM00717santcoord: 104..153
e-value: 1.3E-10
score: 51.3
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 107..150
e-value: 7.0E-11
score: 42.0
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 108..150
e-value: 1.22365E-11
score: 57.5854
IPR016827Transcriptional adaptor 2PIRSFPIRSF025024Txn_adaptor_ADA2coord: 35..559
e-value: 0.0
score: 508.0
IPR043145Zinc finger, ZZ-type superfamilyGENE3D3.30.60.90coord: 43..97
e-value: 6.0E-11
score: 44.0
NoneNo IPR availableGENE3D1.10.10.60coord: 106..155
e-value: 9.2E-13
score: 49.7
NoneNo IPR availableGENE3D1.10.10.780coord: 475..558
e-value: 4.3E-18
score: 66.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..481
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..462
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 48..110
IPR017884SANT domainPROSITEPS51293SANTcoord: 103..155
score: 21.756
IPR007526SWIRM domainPROSITEPS50934SWIRMcoord: 474..560
score: 9.567
IPR041983ADA2-like, zinc finger, ZZ-typeCDDcd02335ZZ_ADA2coord: 48..96
e-value: 5.3983E-28
score: 103.912
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 101..154
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 469..557

Sequences
The following sequences are available for this feature:

mRNA sequence

>LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g199500; organism=Vigna angularis; type=mRNA; length=4770bp
ATGGGTCGTTCTCGTGGGAATTTTCATCACGCCGACGAGGACCCCAACCA
GAGGTTTCTctctttcaatttattttcttatctttacCTGATTATACTTA
AAGATTTTAGTCCTTGGTCCAAATGTAAATCTCCTTGTGAGAGAACCGAT
GACAATTACAATTGAACTTGATGTGTTCTTGAATGTGTATAACTGATCAC
AAATACAGTAAAATGCCATGCTTATTTTACACTTTGATGCTTAACTAAAT
CTTTCTTTGCTCCCTTTCTTTTTCCCCCCCTTGTGTTGTATCTGTTTAAT
TGGTTTTTTGGCTCTGTAgatcaagaagaaaaaaaaatgccgCCAGTGGA
GAAAACTCTGAATCTGGAGCTGCAGGTAATTTTTTTGCACTATTCTGCAT
TATCTTGATAAGTTTGATCCTTCAATGTACTATGAAGTTATAGGGTTTAT
GTAAAAGATGAGGTTCTCAGGGTTGTTTGATTGTACGAAAATACGTAAGA
GCACACCTATTTATCTCCTCGCCGATTTGCATGTAAATTGCACAGTATCA
ATGGGGCATAGTTGGTTGTCTGTGCCATTTGCCCGTAAACATAGTTGTTA
ACTGGGTAtgaataattcataattatgaTTGATCAATTACAAGTTCTTTA
TGAGCGATTGAGACAAATTGAGACAAATTTATCTACATAGCCTATCTCAC
TTATTCGGGTTGAAATTTATTGTTGTAAATATGTACCCGTACTTCATATT
CACAATGGGTATATTATGATGTAGTTATGTTGAACACTGTAGTTTTGTCA
CTACAGTGTATTCCTGAAGgaacttttaaattatgttttcaaaCTCCATC
AAATACAAAAGCTTATTTCTCAATGCATGTGCTCAATAGTCTTTTTACTG
AAGATATCATGTATGTGTGGCctgattttctttttccatttaaaATAAAG
GAAACTAGAAGAAAGGTTGTGTTGTGATTTGTTCTGGTTGTTCTGATATG
TTAAAGAAACCACACTAATTAATTTTCAGACATGAAAAACTATAGCTGTA
GTAGTTACTTAGACCTTAAATTGCCTTGTTGATTCATGAATATTGATGTT
cgaaaatatatattcttttggTTTTCACATGAACTAGGTCAAGGAGCAGG
TGAAGGGAAAAAGGCTCTGTACCATTGCAATTATTGTAATAAAGATATAA
CAGGAAAAATCCGGATTAAGTGTGCCATGTGCCCGGATTTTGACTTGTGT
ATAGAGTGCTTTTCCGTTGGAGCTGAGGTGACACCTCACAAAAGCAACCA
TCCTTACAGGGTTATGGTCAGTTACTGTTAATCTCCCATGTTTTTGTTTA
ATGCTTTCttaatttaaagatttttattAATGAGAAAGTTGTGTTATTTT
TCCTGCAAAACTGCTGCTTGAGCTGTCTGACTGTCTCTGATAGATTACAG
GATCACTCACTTAAGTTTCATTGGAGTTTTCTTCTAAAAATGTTTTGTTA
CCTTGTGTAAAATATGATTTAGATTTGTGGGAGTTTATCTTTAAATGAAT
GTCCCAAGCTGTTAAGAAAATTGTGTTATGTGATTCTATTTTGACAGGAT
AATTTGTCTTTCCCTCTTATTTGCCCAGACTGgaatgcagatgatgaaat
tttgCTTCTAGaggtaattcaaatttatttcctAGGTGTAATGATGACCA
GTTGTTTGAAACTGGAAAACCTGTGTTCCTGGAATATATCTCTTATTTGT
ATCTGATCTTTGagcaaattttttttattatttattttagggAATCGAAA
TGTATGGCTTGGGAAACTGGACAGAAGTCGCTGAGCACGTTGGAACCAAA
AACAAAGAGTCATGCATCGAACACTATAAGAACATATACTTGAGCTCCCC
ATTCTTTCCTGTTCCGGTATGATGGGGCATCAAATGAAGATTCaatgaat
gttttttattattttcatagtGGTATTTTATATCCTGGTCTGTCTTATTT
TCTAGGACATGTCTCATGTGGTTgggaaaaacagaaaagaacTTCTTGCC
ATGGCAAAGGGGCAGGGTGAAGACAAGAAAGGTTTGTCAAGATCCATGAA
AGCACAttcattaatttctaatttagtGTCACTTGTATAGTATGTTTACC
AGTTCTTTTAGAGGACATGAACTTGCTTCCTTCTACTTGACTTTGTATGT
ACAAATAATAATGCCTGGATGCTTGCAGCAGATTGTCTTAATATAAATGC
ACCGAATGACTCTGATTACTTTGATTATTTTGCATGATCGATATGTGGTT
TCTGATTATTTTGCATGGTTGATAGGCTTTTTGTGTTTTAGTGACATTTT
CATATCTATTGGTCACCTGTGATTGGCACAGGAATTTCCATGGGGGATCT
TAGTTTAAAGGCAGAATCTCCCTTCTCTCCATCTAGAGCCAAGTAAGACT
GTCATTTTTATATGCTTCATCTCTcttctttatattatattctCTAATGT
CTATTTGTTCATTCAGGGTTGAAGATTCACATAAAGCGGGCACTGCTAAT
CGTTTGTCTTCCAATTTGAATTCAGGTAAAGCAAAATAAGTTTAGAGCTG
ATTAGTTAACCATGCATCGACTTAcccattttcatattctttggATCCCC
TATCTTGTTTATTTATGGCAGAGCTAGATTCTGGTCCCTCGGGTAACACA
CACTCTGCAGCTGGTGCTAACCAAAAGGCATCTAATGTGACGAGGGGAAA
AGGTGGTCCTGGAGTCATTAAAATGGAAGGTATGCATCTTTATGTTTGGT
TCTTAGCCCTCATtgacttttaataaattttgtccTTTTGAATTTCACTT
CATCGAAAAACTTAAAAACCAACCTGTTGGAATAACACCTTTTACTTTTA
TTCgtataaaagaaagagaggtgaaAGACTTTTGTGTGTTGCATATTTTT
CAACCATAACAATAACTTATATGTGATGAAATGAAGCAGTTCTTCCATTA
CTAGTATAACTAAAACTAAGATTTTCACGTAGTTTAATTTTCTATCATGT
ATGTTCTTTGAGGAGATTAATGACACTCTGATGTATTAAATTTCCTAGTC
TCTATCATTGACAGATTCTCAGATAGACAGAGATTTTGGAGGAAAGAAGC
CAACTTCCTCAGGAAATGAAGGTCCTTCTTTAGTAGAATTGAGTGGTTAC
AATGCTAAAAGACAAGAATTTGATCCTGAATATGATAATGATGCTGAACA
ACTACTTGCTGAAATGGAATTTAAGGATACTGACTCTGAGGAAGAGCGAG
AGTTGAAATTACGTGTATTGCGTTTATATTCAAAGAGGTAAATAAccaat
ttaatgattttttgtttttttaatcatttaaggtcaactattattttatt
aatgtgatAATGAGCATATTCGATATGACGAAACActtattttaagaata
atatCATAATTGAAGCgtgacaaatatatatttaaaaatgtataaaaatg
cTTAAAATGCAATAAATGTATGACTGTAATTGGACCAGTACAAATTAAAC
TCACATTTCTTAGACATGATCAAATAAAGAGTTATAAATCATTATGATCA
CAAAAGCTTTGGTGCTTCATATGCTTTGATACTTCATTGATACGAATTGG
TGATGCATCCTAGAGTATCCTATAGAGATTTGTAAAACAAATTGAAACAT
CAGAGCATCAAAGTCTGGATGTATTGACAGTAAGAATTTTTTATTCGATA
ATTGTTGCAGGCTTGATGAAAGAAAGCGGAGGAAGGATTTCATACTCGAA
AGAAATTTGTTATACCCAAATCCATTGGAGAAGGATTTAACAGCCGAGGA
GAAGGCAATGTGTCGAAAATATGATATATTCATGCGCTTTCATTCTAAGG
AAGATCACGATGAATTACTTAGAACAATGCTCTTTGAGCATAGAAGTTGG
AAAAAAATTCAAGAGCTTAAGGTTTGAAACATGACATTAAATTACTATTT
AACATTCACTTTTAttgttctttcttttgctttttgtcCCTTGGTATGAC
ATATGTGGAGAATAGAAAATTTTTCATCCTAATTAAGCACTTAGATTGCT
GTAGTGAAATTGATATTCTGTTAGATTCTAACTCTCACTTTTGATATACT
GCAGGAAGCCCGGTTAGCCGGCTGCCGTAATTCAGCTGATGCTGAAAAAT
ATATCTCATTGAAGAGAAAGAGGGAAGCTGAAGAAAATGCTCGAAGGACA
AGGACAAAAGAAAGTGCTCAGGTTGGGCCGAGCAATCAGGGAATTCCAAA
TGCATTGACTTCTCCAGATTCAGCTGGTAAGGATCTGAGTGCAAGACCTG
CAGGGCCAGCTACTTCTAGTTCTGTCAACGAGATGGATGCCATAGGATAC
AATGGAGCAGATTTACTTTCTGAAGCGGTAAGCTTCTGGAATTGACCTGA
TATAAACTGTAATAGTTAtctaagtttatttatatttttctatgctTATT
ATAAATGGTTTTGgccaatttttctttattaatatatatccAGTTAATTA
ATTTTCTGAGGTCTGTTTTGTATGTTAGGAGAAACGTTTGTGCTGTGAGC
TAAGATTGTCTCCAGCCACGTATCTAAAAATGCAAGAGCAACTGTCACTG
CAAATACTTGCTGGCACCGTCTCTGCAAAATCCGATGCTCATCAATTGTT
CAAGTTGGATGCCATGAAAGTTGACAGGGTGTATGATATGCTTATTAAAA
AGGGGATCGGTTTACCCTGA
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protein sequence of LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1

>LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1; organism=Vigna angularis; type=polypeptide; length=560bp
MGRSRGNFHHADEDPNQRSRRKKNAASGENSESGAAGQGAGEGKKALYHC
NYCNKDITGKIRIKCAMCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLS
FPLICPDWNADDEILLLEGIEMYGLGNWTEVAEHVGTKNKESCIEHYKNI
YLSSPFFPVPDMSHVVGKNRKELLAMAKGQGEDKKGISMGDLSLKAESPF
SPSRAKVEDSHKAGTANRLSSNLNSELDSGPSGNTHSAAGANQKASNVTR
GKGGPGVIKMEDSQIDRDFGGKKPTSSGNEGPSLVELSGYNAKRQEFDPE
YDNDAEQLLAEMEFKDTDSEEERELKLRVLRLYSKRLDERKRRKDFILER
NLLYPNPLEKDLTAEEKAMCRKYDIFMRFHSKEDHDELLRTMLFEHRSWK
KIQELKEARLAGCRNSADAEKYISLKRKREAEENARRTRTKESAQVGPSN
QGIPNALTSPDSAGKDLSARPAGPATSSSVNEMDAIGYNGADLLSEAEKR
LCCELRLSPATYLKMQEQLSLQILAGTVSAKSDAHQLFKLDAMKVDRVYD
MLIKKGIGLP
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mRNA from alignment at Chr_9-CM003379.1:24855394..24860163+

Legend: polypeptidestart_codonexonCDSintronstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g199500; organism=Vigna angularis; type=mRNA; length=4770bp; location=Sequence derived from: Chr_9-CM003379.1:24855394..24860163+ (Vigna angularis
ATGGGTCGTTCTCGTGGGAATTTTCATCACGCCGACGAGGACCCCAACCA
GAGGTTTCTctctttcaatttattttcttatctttacCTGATTATACTTA
AAGATTTTAGTCCTTGGTCCAAATGTAAATCTCCTTGTGAGAGAACCGAT
GACAATTACAATTGAACTTGATGTGTTCTTGAATGTGTATAACTGATCAC
AAATACAGTAAAATGCCATGCTTATTTTACACTTTGATGCTTAACTAAAT
CTTTCTTTGCTCCCTTTCTTTTTCCCCCCCTTGTGTTGTATCTGTTTAAT
TGGTTTTTTGGCTCTGTAgatcaagaagaaaaaaaaatgccgCCAGTGGA
GAAAACTCTGAATCTGGAGCTGCAGGTAATTTTTTTGCACTATTCTGCAT
TATCTTGATAAGTTTGATCCTTCAATGTACTATGAAGTTATAGGGTTTAT
GTAAAAGATGAGGTTCTCAGGGTTGTTTGATTGTACGAAAATACGTAAGA
GCACACCTATTTATCTCCTCGCCGATTTGCATGTAAATTGCACAGTATCA
ATGGGGCATAGTTGGTTGTCTGTGCCATTTGCCCGTAAACATAGTTGTTA
ACTGGGTAtgaataattcataattatgaTTGATCAATTACAAGTTCTTTA
TGAGCGATTGAGACAAATTGAGACAAATTTATCTACATAGCCTATCTCAC
TTATTCGGGTTGAAATTTATTGTTGTAAATATGTACCCGTACTTCATATT
CACAATGGGTATATTATGATGTAGTTATGTTGAACACTGTAGTTTTGTCA
CTACAGTGTATTCCTGAAGgaacttttaaattatgttttcaaaCTCCATC
AAATACAAAAGCTTATTTCTCAATGCATGTGCTCAATAGTCTTTTTACTG
AAGATATCATGTATGTGTGGCctgattttctttttccatttaaaATAAAG
GAAACTAGAAGAAAGGTTGTGTTGTGATTTGTTCTGGTTGTTCTGATATG
TTAAAGAAACCACACTAATTAATTTTCAGACATGAAAAACTATAGCTGTA
GTAGTTACTTAGACCTTAAATTGCCTTGTTGATTCATGAATATTGATGTT
cgaaaatatatattcttttggTTTTCACATGAACTAGGTCAAGGAGCAGG
TGAAGGGAAAAAGGCTCTGTACCATTGCAATTATTGTAATAAAGATATAA
CAGGAAAAATCCGGATTAAGTGTGCCATGTGCCCGGATTTTGACTTGTGT
ATAGAGTGCTTTTCCGTTGGAGCTGAGGTGACACCTCACAAAAGCAACCA
TCCTTACAGGGTTATGGTCAGTTACTGTTAATCTCCCATGTTTTTGTTTA
ATGCTTTCttaatttaaagatttttattAATGAGAAAGTTGTGTTATTTT
TCCTGCAAAACTGCTGCTTGAGCTGTCTGACTGTCTCTGATAGATTACAG
GATCACTCACTTAAGTTTCATTGGAGTTTTCTTCTAAAAATGTTTTGTTA
CCTTGTGTAAAATATGATTTAGATTTGTGGGAGTTTATCTTTAAATGAAT
GTCCCAAGCTGTTAAGAAAATTGTGTTATGTGATTCTATTTTGACAGGAT
AATTTGTCTTTCCCTCTTATTTGCCCAGACTGgaatgcagatgatgaaat
tttgCTTCTAGaggtaattcaaatttatttcctAGGTGTAATGATGACCA
GTTGTTTGAAACTGGAAAACCTGTGTTCCTGGAATATATCTCTTATTTGT
ATCTGATCTTTGagcaaattttttttattatttattttagggAATCGAAA
TGTATGGCTTGGGAAACTGGACAGAAGTCGCTGAGCACGTTGGAACCAAA
AACAAAGAGTCATGCATCGAACACTATAAGAACATATACTTGAGCTCCCC
ATTCTTTCCTGTTCCGGTATGATGGGGCATCAAATGAAGATTCaatgaat
gttttttattattttcatagtGGTATTTTATATCCTGGTCTGTCTTATTT
TCTAGGACATGTCTCATGTGGTTgggaaaaacagaaaagaacTTCTTGCC
ATGGCAAAGGGGCAGGGTGAAGACAAGAAAGGTTTGTCAAGATCCATGAA
AGCACAttcattaatttctaatttagtGTCACTTGTATAGTATGTTTACC
AGTTCTTTTAGAGGACATGAACTTGCTTCCTTCTACTTGACTTTGTATGT
ACAAATAATAATGCCTGGATGCTTGCAGCAGATTGTCTTAATATAAATGC
ACCGAATGACTCTGATTACTTTGATTATTTTGCATGATCGATATGTGGTT
TCTGATTATTTTGCATGGTTGATAGGCTTTTTGTGTTTTAGTGACATTTT
CATATCTATTGGTCACCTGTGATTGGCACAGGAATTTCCATGGGGGATCT
TAGTTTAAAGGCAGAATCTCCCTTCTCTCCATCTAGAGCCAAGTAAGACT
GTCATTTTTATATGCTTCATCTCTcttctttatattatattctCTAATGT
CTATTTGTTCATTCAGGGTTGAAGATTCACATAAAGCGGGCACTGCTAAT
CGTTTGTCTTCCAATTTGAATTCAGGTAAAGCAAAATAAGTTTAGAGCTG
ATTAGTTAACCATGCATCGACTTAcccattttcatattctttggATCCCC
TATCTTGTTTATTTATGGCAGAGCTAGATTCTGGTCCCTCGGGTAACACA
CACTCTGCAGCTGGTGCTAACCAAAAGGCATCTAATGTGACGAGGGGAAA
AGGTGGTCCTGGAGTCATTAAAATGGAAGGTATGCATCTTTATGTTTGGT
TCTTAGCCCTCATtgacttttaataaattttgtccTTTTGAATTTCACTT
CATCGAAAAACTTAAAAACCAACCTGTTGGAATAACACCTTTTACTTTTA
TTCgtataaaagaaagagaggtgaaAGACTTTTGTGTGTTGCATATTTTT
CAACCATAACAATAACTTATATGTGATGAAATGAAGCAGTTCTTCCATTA
CTAGTATAACTAAAACTAAGATTTTCACGTAGTTTAATTTTCTATCATGT
ATGTTCTTTGAGGAGATTAATGACACTCTGATGTATTAAATTTCCTAGTC
TCTATCATTGACAGATTCTCAGATAGACAGAGATTTTGGAGGAAAGAAGC
CAACTTCCTCAGGAAATGAAGGTCCTTCTTTAGTAGAATTGAGTGGTTAC
AATGCTAAAAGACAAGAATTTGATCCTGAATATGATAATGATGCTGAACA
ACTACTTGCTGAAATGGAATTTAAGGATACTGACTCTGAGGAAGAGCGAG
AGTTGAAATTACGTGTATTGCGTTTATATTCAAAGAGGTAAATAAccaat
ttaatgattttttgtttttttaatcatttaaggtcaactattattttatt
aatgtgatAATGAGCATATTCGATATGACGAAACActtattttaagaata
atatCATAATTGAAGCgtgacaaatatatatttaaaaatgtataaaaatg
cTTAAAATGCAATAAATGTATGACTGTAATTGGACCAGTACAAATTAAAC
TCACATTTCTTAGACATGATCAAATAAAGAGTTATAAATCATTATGATCA
CAAAAGCTTTGGTGCTTCATATGCTTTGATACTTCATTGATACGAATTGG
TGATGCATCCTAGAGTATCCTATAGAGATTTGTAAAACAAATTGAAACAT
CAGAGCATCAAAGTCTGGATGTATTGACAGTAAGAATTTTTTATTCGATA
ATTGTTGCAGGCTTGATGAAAGAAAGCGGAGGAAGGATTTCATACTCGAA
AGAAATTTGTTATACCCAAATCCATTGGAGAAGGATTTAACAGCCGAGGA
GAAGGCAATGTGTCGAAAATATGATATATTCATGCGCTTTCATTCTAAGG
AAGATCACGATGAATTACTTAGAACAATGCTCTTTGAGCATAGAAGTTGG
AAAAAAATTCAAGAGCTTAAGGTTTGAAACATGACATTAAATTACTATTT
AACATTCACTTTTAttgttctttcttttgctttttgtcCCTTGGTATGAC
ATATGTGGAGAATAGAAAATTTTTCATCCTAATTAAGCACTTAGATTGCT
GTAGTGAAATTGATATTCTGTTAGATTCTAACTCTCACTTTTGATATACT
GCAGGAAGCCCGGTTAGCCGGCTGCCGTAATTCAGCTGATGCTGAAAAAT
ATATCTCATTGAAGAGAAAGAGGGAAGCTGAAGAAAATGCTCGAAGGACA
AGGACAAAAGAAAGTGCTCAGGTTGGGCCGAGCAATCAGGGAATTCCAAA
TGCATTGACTTCTCCAGATTCAGCTGGTAAGGATCTGAGTGCAAGACCTG
CAGGGCCAGCTACTTCTAGTTCTGTCAACGAGATGGATGCCATAGGATAC
AATGGAGCAGATTTACTTTCTGAAGCGGTAAGCTTCTGGAATTGACCTGA
TATAAACTGTAATAGTTAtctaagtttatttatatttttctatgctTATT
ATAAATGGTTTTGgccaatttttctttattaatatatatccAGTTAATTA
ATTTTCTGAGGTCTGTTTTGTATGTTAGGAGAAACGTTTGTGCTGTGAGC
TAAGATTGTCTCCAGCCACGTATCTAAAAATGCAAGAGCAACTGTCACTG
CAAATACTTGCTGGCACCGTCTCTGCAAAATCCGATGCTCATCAATTGTT
CAAGTTGGATGCCATGAAAGTTGACAGGGTGTATGATATGCTTATTAAAA
AGGGGATCGGTTTACCCTGA
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Coding sequence (CDS) from alignment at Chr_9-CM003379.1:24855394..24860163+

>LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1 ID=LR48_mrnaVigan09g199500_Va_Jingnong6_v1.1; Name=LR48_mrnaVigan09g199500; organism=Vigna angularis; type=CDS; length=1683bp; location=Sequence derived from: Chr_9-CM003379.1:24855394..24860163+ (Vigna angularis
ATGGGTCGTTCTCGTGGGAATTTTCATCACGCCGACGAGGACCCCAACCA
GAGatcaagaagaaaaaaaaatgccgCCAGTGGAGAAAACTCTGAATCTG
GAGCTGCAGGTCAAGGAGCAGGTGAAGGGAAAAAGGCTCTGTACCATTGC
AATTATTGTAATAAAGATATAACAGGAAAAATCCGGATTAAGTGTGCCAT
GTGCCCGGATTTTGACTTGTGTATAGAGTGCTTTTCCGTTGGAGCTGAGG
TGACACCTCACAAAAGCAACCATCCTTACAGGGTTATGGATAATTTGTCT
TTCCCTCTTATTTGCCCAGACTGgaatgcagatgatgaaattttgCTTCT
AGagggAATCGAAATGTATGGCTTGGGAAACTGGACAGAAGTCGCTGAGC
ACGTTGGAACCAAAAACAAAGAGTCATGCATCGAACACTATAAGAACATA
TACTTGAGCTCCCCATTCTTTCCTGTTCCGGACATGTCTCATGTGGTTgg
gaaaaacagaaaagaacTTCTTGCCATGGCAAAGGGGCAGGGTGAAGACA
AGAAAGGAATTTCCATGGGGGATCTTAGTTTAAAGGCAGAATCTCCCTTC
TCTCCATCTAGAGCCAAGGTTGAAGATTCACATAAAGCGGGCACTGCTAA
TCGTTTGTCTTCCAATTTGAATTCAGAGCTAGATTCTGGTCCCTCGGGTA
ACACACACTCTGCAGCTGGTGCTAACCAAAAGGCATCTAATGTGACGAGG
GGAAAAGGTGGTCCTGGAGTCATTAAAATGGAAGATTCTCAGATAGACAG
AGATTTTGGAGGAAAGAAGCCAACTTCCTCAGGAAATGAAGGTCCTTCTT
TAGTAGAATTGAGTGGTTACAATGCTAAAAGACAAGAATTTGATCCTGAA
TATGATAATGATGCTGAACAACTACTTGCTGAAATGGAATTTAAGGATAC
TGACTCTGAGGAAGAGCGAGAGTTGAAATTACGTGTATTGCGTTTATATT
CAAAGAGGCTTGATGAAAGAAAGCGGAGGAAGGATTTCATACTCGAAAGA
AATTTGTTATACCCAAATCCATTGGAGAAGGATTTAACAGCCGAGGAGAA
GGCAATGTGTCGAAAATATGATATATTCATGCGCTTTCATTCTAAGGAAG
ATCACGATGAATTACTTAGAACAATGCTCTTTGAGCATAGAAGTTGGAAA
AAAATTCAAGAGCTTAAGGAAGCCCGGTTAGCCGGCTGCCGTAATTCAGC
TGATGCTGAAAAATATATCTCATTGAAGAGAAAGAGGGAAGCTGAAGAAA
ATGCTCGAAGGACAAGGACAAAAGAAAGTGCTCAGGTTGGGCCGAGCAAT
CAGGGAATTCCAAATGCATTGACTTCTCCAGATTCAGCTGGTAAGGATCT
GAGTGCAAGACCTGCAGGGCCAGCTACTTCTAGTTCTGTCAACGAGATGG
ATGCCATAGGATACAATGGAGCAGATTTACTTTCTGAAGCGGAGAAACGT
TTGTGCTGTGAGCTAAGATTGTCTCCAGCCACGTATCTAAAAATGCAAGA
GCAACTGTCACTGCAAATACTTGCTGGCACCGTCTCTGCAAAATCCGATG
CTCATCAATTGTTCAAGTTGGATGCCATGAAAGTTGACAGGGTGTATGAT
ATGCTTATTAAAAAGGGGATCGGTTTACCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000433Znf_ZZ
IPR001005SANT/Myb
IPR016827Ada2/TADA2
IPR043145Znf_ZZ_sf
IPR017884SANT_dom
IPR007526SWIRM
IPR041983ADA2-like_ZZ
IPR009057Homeodomain-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003713transcription coactivator activity
GO:0005515protein binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
GO:0035065obsolete regulation of histone acetylation