Psat04G0013600-T1

Transcript Overview
NamePsat04G0013600-T1
Unique NamePsat04G0013600-T1_zw6_v1
TypemRNA
OrganismPisum sativum (pea)
Sequence length690
Producthypothetical protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr4chromosomechr4:8078038..8080239 -Pisum sativum cv. Zhongwan6 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
zwszwsL007Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsL041Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhzwsL397Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vuzwsL259Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anzwsL0422Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vuzwsL445Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
anzwsL0786Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
caizwsL065Cicer arietinum ICC 4958 genome v2Cicer arietinum
cazwsL036Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
crzwsL062Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
caizwsL834Cicer arietinum ICC 4958 genome v2Cicer arietinum
crzwsL831Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
cazwsL555Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
pszwsL076Pisum sativum Cameor genome v1aPisum sativum
tifzwsL037Vicia faba cv. Tiffany genome v1.0Vicia faba
pvzwsL335Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pszwsL306Pisum sativum Cameor genome v1aPisum sativum
pvzwsL512Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
tifzwsL380Vicia faba cv. Tiffany genome v1.0Vicia faba
vrvzwsL060Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvzwsL548Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vsszwsL056Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuazwsL232Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vsszwsL266Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuazwsL397Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canzwsL039Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canzwsL490Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_27195Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.003G082200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_00676Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_014662551.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.1g367880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_09365Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014652888.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun03g443200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun06g156900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.006G145000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg48606.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr03.1079Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_004486140.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cr_02541.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
jg39084.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.4g186400.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cr_22190.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_22003.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr06.1633Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.4g242440.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_004507602.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Hedin2.R1.1g448520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_02257.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_03398Cicer arietinum CDC Frontier genome v1.0Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Psat01G0483500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Psat1g177600.1Pisum sativum Cameor genome v1aPisum sativum
Psat4g005200.1Pisum sativum Cameor genome v1aPisum sativum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Psat04G0013600Psat04G0013600_zw6_v1Pisum sativumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat04G0013600-T1.exon2Psat04G0013600-T1.exon2_zw6_v1Pisum sativumexon
Psat04G0013600-T1.exon1Psat04G0013600-T1.exon1_zw6_v1Pisum sativumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Psat04G0013600-T1.cdsPsat04G0013600-T1.cds_zw6_v1_2Pisum sativumCDS
Psat04G0013600-T1.cdsPsat04G0013600-T1.cds_zw6_v1Pisum sativumCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Psat04G0013600-T1_zw6_v1Psat04G0013600-T1_zw6_v1Pisum sativumpolypeptide
Psat04G0013600-T1_zw6_v1Psat04G0013600-T1_zw6_v1-proteinPisum sativumpolypeptide


Homology
[Close]
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|G7JKF7|G7JKF7_MEDTR (Putative transcription factor C2H2 family OS=Medicago truncatula OX=3880 GN=11446421 PE=4 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 6.338e-108
Identity = 172/225 (76.44%), Postives = 183/225 (81.33%), Query Frame = 0 
Query:   19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQD---PNP-DP--------SSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTT--TVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            MSQLGLIL ESLR QRE+RT+LGLLTEQMDA DS TTRRRSLKERFRFTG+G CCGATWVFRPIIRHEHHHQ+ +       EGE  VEQ++        PNP +P        S SGMNLAAALAAERQMR SEE+SGGE  TPWRVSLMKLLEETE E+ES     V+EGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRSQRESRTILGLLTEQMDALDSGTTRRRSLKERFRFTGMG-CCGATWVFRPIIRHEHHHQRNE-------EGEATVEQQQQLQVQDQDPNPVEPECEAPAGSSGSGMNLAAALAAERQMRVSEEASGGEGATPWRVSLMKLLEETEGENESNAGAVVVEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 217
[Close]
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3JT98|A0A2K3JT98_TRIPR (RING/U-box domain-containing protein OS=Trifolium pratense OX=57577 GN=L195_g050318 PE=4 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 5.954e-106
Identity = 167/219 (76.26%), Postives = 177/219 (80.82%), Query Frame = 0 
Query:   19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNP------DPSSSG--MNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            MSQLGLIL ESLRPQREART+LGLLTEQMD  D  T+RRRSLKERFRF G+G CCGATWVFRPIIRHE       R+RE              QVQDPNP      +P SSG  MNLA ALAAERQMRGSEE+SGGE GTPWRVSLMKLLEE EVE+ESTT  +EG+D+VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRPQREARTILGLLTEQMDGVDLGTSRRRSLKERFRFIGMG-CCGATWVFRPIIRHE-------REREATE-----------QVQDPNPVEPECVNPGSSGSGMNLATALAAERQMRGSEEASGGEGGTPWRVSLMKLLEEKEVENESTT--VEGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 198
[Close]
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LHM0|A0A2Z6LHM0_TRISU (RING-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_203200 PE=4 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.439e-97
Identity = 158/219 (72.15%), Postives = 170/219 (77.63%), Query Frame = 0 
Query:   19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNP------DPSSSG--MNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            MSQLGLIL ESLRPQREART+LGLLTEQMD  D+ TTRRRSLKER RFTG+G CCGATWVFRPIIRH+    ++  +RE              QVQDPNP      +P SSG  MNLA ALAAERQMRGSEE+S GE GT WRVSLMKLL     E E    V+EG+D+VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRPQREARTILGLLTEQMDGLDTGTTRRRSLKERLRFTGMG-CCGATWVFRPIIRHQQQGDERVTEREATE-----------QVQDPNPVEPECVNPGSSGSGMNLATALAAERQMRGSEETSSGEGGTTWRVSLMKLL----EEKEVENEVVEGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 203
[Close]
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A445K2D0|A0A445K2D0_GLYSO (RING-type domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_019069 PE=4 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 5.232e-86
Identity = 143/223 (64.13%), Postives = 155/223 (69.51%), Query Frame = 0 
Query:   19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNPD--------PSSSGMNLAAALAAERQMRGSEESSGGER----GTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            MSQLGLIL ESLR +RE RT+LGLLTEQMD  D +  RRR+LKER RFTGIG CCGATWVFRPI+R E    Q  +Q+  A              QDPNP+        PS + MNLAAALAAERQ+R  E    G R    GTP RVSLM+LLEETE           G+D VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRTERETRTILGLLTEQMDGVDRAQRRRRTLKERLRFTGIG-CCGATWVFRPIVREEGGGAQAHQQQTNA-------------AQDPNPNGSEYVSPSPSGTSMNLAAALAAERQLRDGEGE--GRRVVAPGTPLRVSLMRLLEETEGGDAEKGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 207
[Close]
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|I1KNH8|I1KNH8_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=106799504 PE=4 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 7.588e-86
Identity = 143/223 (64.13%), Postives = 155/223 (69.51%), Query Frame = 0 
Query:   19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNPD--------PSSSGMNLAAALAAERQMRGSEESSGGER----GTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            MSQLGLIL ESLR +RE RT+LGLLTEQMD  D +  RRR+LKER RFTGIG CCGATWVFRPI+R E    Q  +Q+  A              QDPNP+        PS + MNLAAALAAERQ+R  E    G R    GTP RVSLM+LLEETE           G+D VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRTERETRTILGLLTEQMDGVDRAQRRRRTLKERLRFTGIG-CCGATWVFRPIVREEGGGAQAHQQQTNA-------------AQDPNPNDPKYVSPSPSGTSMNLAAALAAERQLRDGEGE--GRRVVAPGTPLRVSLMRLLEETEGGDAEKGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 207
[Close]
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A445G0K8|A0A445G0K8_GLYSO (RING-type domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_044527 PE=4 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 1.364e-82
Identity = 147/219 (67.12%), Postives = 157/219 (71.69%), Query Frame = 0 
Query:   19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPN--------PDPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            MSQLGLIL ESLR +REART+LGLLTEQMD+      RRR+LKER RFTGIG CCGATWVFRPI+R E    Q Q+Q +     ETN  Q      DPN        P  SSSGMNLAAALAAERQ R  E       GTP RVSLM+LLEETE    +   V  G+D VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRTEREARTILGLLTEQMDSVGRGQRRRRTLKERLRFTGIG-CCGATWVFRPIVRDEGGGAQAQQQPQ-----ETNAGQ------DPNHTGPEHVGPSQSSSGMNLAAALAAERQFREGE-------GTPLRVSLMRLLEETEGGDAAVEAV--GNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 198
[Close]
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|I1MR22|I1MR22_SOYBN (RING-type domain-containing protein OS=Glycine max OX=3847 GN=100792613 PE=4 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 1.364e-82
Identity = 147/219 (67.12%), Postives = 157/219 (71.69%), Query Frame = 0 
Query:   19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPN--------PDPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            MSQLGLIL ESLR +REART+LGLLTEQMD+      RRR+LKER RFTGIG CCGATWVFRPI+R E    Q Q+Q +     ETN  Q      DPN        P  SSSGMNLAAALAAERQ R  E       GTP RVSLM+LLEETE    +   V  G+D VCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRTEREARTILGLLTEQMDSVGRGQRRRRTLKERLRFTGIG-CCGATWVFRPIVRDEGGGAQAQQQPQ-----ETNAGQ------DPNHTGPEHVGPSQSSSGMNLAAALAAERQFREGE-------GTPLRVSLMRLLEETEGGDAAVEAV--GNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 198
[Close]
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A371F6B2|A0A371F6B2_MUCPR (RING-type domain-containing protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_46491 PE=4 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.535e-81
Identity = 146/227 (64.32%), Postives = 161/227 (70.93%), Query Frame = 0 
Query:   19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNPD------------PSSSGMNLAAALAAERQMRGSEESS----GGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            MSQLGLIL ESLR +REART+LGLLTEQMD  D    RRR+LKER RF    GCCGATWVFR  +R E       R ++  ++ +TN  Q      DPNP+            PS SGMNLAAALAAERQ R S E+     G  RGTPWRVSLM+LLEET VE+E    V  G+DS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG CPLCNRSILEILDIF
Sbjct:    1 MSQLGLILQESLRNEREARTILGLLTEQMDGVDGGQRRRRTLKERLRF----GCCGATWVFRHTVRDEG------RNQQHQQQQQTNAGQ------DPNPNGPDCVGPSPSPSPSGSGMNLAAALAAERQFRESHETDAIGEGEARGTPWRVSLMRLLEETAVEAEKGGAV--GNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 209
[Close]
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2YP08|A0A1S2YP08_CICAR (E3 ubiquitin-protein ligase COP1 OS=Cicer arietinum OX=3827 GN=LOC101490848 PE=4 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 1.060e-79
Identity = 150/219 (68.49%), Postives = 167/219 (76.26%), Query Frame = 0 
Query:   19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNP--------DPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            MSQLGLIL ES   QREART+LGLLT+QMDA D+ T RRR+LKERFRFTGIG CCGATWVFRP++RHEH  Q+               E+++L VQDP+P         PS SGMNLAAALAAERQMRG EE       TPWRVSLM+LLEETEVE+        G+DSVCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG+CPLCNRS+LEILDIF
Sbjct:    1 MSQLGLILQES---QREARTILGLLTQQMDAVDTRTRRRRTLKERFRFTGIG-CCGATWVFRPVLRHEHQQQE------------EATEEQQLPVQDPDPVEPECVGPGPSGSGMNLAAALAAERQMRGPEEGE-----TPWRVSLMRLLEETEVETAVEE----GNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREMWLNRGSCPLCNRSVLEILDIF 194
[Close]
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3S3U7|A0A0S3S3U7_PHAAN (RING-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G089000 PE=4 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.466e-76
Identity = 131/219 (59.82%), Postives = 153/219 (69.86%), Query Frame = 0 
Query:   19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNPDPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTV--------MEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            MSQLG++L ESL  QRE RT+LGLL++QMD  +S   RR+S KERF F GIG CCGATW FR         +QQQ+    A   ET+  Q    +   +   + SGMNLAAALAAERQ+RG +E  G   GTPWRVSLM+LLEE+E    +            + G+DS+CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG+CPLCNRSILEILDIF
Sbjct:    1 MSQLGVVLQESL--QREPRTILGLLSDQMDGVESGARRRKSFKERFGFMGIG-CCGATWGFRSDALSFTQGEQQQQ----ANHQETDPGQGS-GLDCVDQGAAGSGMNLAAALAAERQIRGPQEEVGRAPGTPWRVSLMRLLEESEGGESAAVEKEKEEEKGDVVGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 211
[Close]
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT4G03965.1 (| RING/U-box superfamily protein | Chr4:1889576-1890205 FORWARD LENGTH=209 | 201606)

HSP 1 Score: 181.03 bits (458), Expect = 3.478e-57
Identity = 112/227 (49.34%), Postives = 134/227 (59.03%), Query Frame = 0 
Query:   19 MSQLGLILHESLRPQREARTLLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQV---QDPNPDPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEET-------EVESE------STTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            MSQLG+   ++     ++ T L LL  QMD  D S  R+R+LKER  F  IG CCG TW  R                  +  GE + E  E ++    D    P + GMNLA ALAAER  R  E  + G   TP +VSLM+LLEET       E E+E      S+T     +DSVCCVCMGRKKGAAFIPCGHTFCRVCSRE+WLNRG+CPLCNR I+EILDI+
Sbjct:    1 MSQLGVETSQAQPETPQSTTFLDLLRLQMDGLDRSRRRKRTLKERLGFKRIG-CCGPTWGLRLT----------------SNTGEDDDEPFENRLVSGSDHVTGPLNQGMNLATALAAERNYRTEETEASGSL-TPLKVSLMRLLEETAERVVVEENETERVTASASSTVRGVNNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 209
[Close]
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT4G22250.1 (| RING/U-box superfamily protein | Chr4:11767685-11768329 REVERSE LENGTH=214 | 201606)

HSP 1 Score: 176.022 bits (445), Expect = 3.723e-55
Identity = 108/206 (52.43%), Postives = 125/206 (60.68%), Query Frame = 0 
Query:   39 LLGLLTEQMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAREGETNVEQEELQVQD----PNPDPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETE---VESESTTT--------VMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
             L LL  QM   D  T R+R+LKER RF  IG CCG TW  R +  +   H    R          + E EELQ++      +   S +GMNLA AL AER  RG E +      TP RVSLM+LLEET    V+ +   T         + G+DSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRG+CPLCNR I+EILDIF
Sbjct:   23 FLDLLRRQMSGHDL-TRRKRTLKERLRFKCIG-CCGPTWNLR-LTNNTTLHSPTSR----------DDEIEELQIETGLVLESDHGSGTGMNLATALEAERYNRG-ESTEAEADMTPRRVSLMRLLEETAEKIVDDDGKETEILTASIGTLTGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214
[Close]
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT1G62370.1 (| RING/U-box superfamily protein | Chr1:23072575-23073189 FORWARD LENGTH=204 | 201606)

HSP 1 Score: 147.902 bits (372), Expect = 2.356e-44
Identity = 94/220 (42.73%), Postives = 129/220 (58.64%), Query Frame = 0 
Query:   19 MSQLGLILHESLRPQREARTLLGLLTE--QMDAADSSTTRRRSLKERFRFTGIGGCCGATWVFR------PII-RHEHHHQQQQRQREGAREGETNVEQEELQVQDPNPDPSSSGMNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            MSQLG +L ES    R  RT++  L E  Q++  D + ++  +LK+R RF  +G CCG     R      PI+   +   ++ Q Q     +  T  E + L           S  NLA ALA ER    +EE +   +     V LM+LL E++   +STTT + G+D +CCVCMGR+KGAAFIPCGHT+CRVCSRE+W+NRG CPLCNRSI ++LD++
Sbjct:    1 MSQLGDLLRESEDGTRSERTMMMSLLEEDQINGGDRTMSKWTTLKQRLRFDWVG-CCGKPLTLRLRQAETPIVVDDDDDEEESQNQVVDFSDPGTGTELDCLT--------RGSTRNLAEALAEERLAHVTEEETAVTK-----VPLMRLLAESD-GCDSTTTWL-GNDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 204
[Close]
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT3G25030.3 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=210 | 201606)

HSP 1 Score: 127.102 bits (318), Expect = 3.733e-36
Identity = 70/158 (44.30%), Postives = 94/158 (59.49%), Query Frame = 0 
Query:   82 IIRHEHHHQQQQRQREGAREGETNVEQEELQVQDPNPDPSSSGMNLAAALAAERQMRGSEESSGGERGT-PWRVSLMKLLEETEV---------ESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            +++ EH H + +   +  RE +  ++QE   V+          + L A LA ER +   EE +  ER   P R+SLM+LLEE E          E+E     +  ++  CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +ILE+LD+F
Sbjct:   62 VMQREHRHSRDKTAWKSLRE-KLRLKQEASSVE--------GRIRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 210
[Close]
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT3G25030.4 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=250 | 201606)

HSP 1 Score: 124.02 bits (310), Expect = 1.949e-34
Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 0 
Query:  125 MNLAAALAAERQMRGSEESSGGERGT-PWRVSLMKLLEETEV---------ESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            + L A LA ER +   EE +  ER   P R+SLM+LLEE E          E+E     +  ++  CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +ILE+LD+F
Sbjct:  136 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
[Close]
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT3G25030.2 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=250 | 201606)

HSP 1 Score: 124.02 bits (310), Expect = 1.949e-34
Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 0 
Query:  125 MNLAAALAAERQMRGSEESSGGERGT-PWRVSLMKLLEETEV---------ESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            + L A LA ER +   EE +  ER   P R+SLM+LLEE E          E+E     +  ++  CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +ILE+LD+F
Sbjct:  136 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
[Close]
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT3G25030.1 (| RING/U-box superfamily protein | Chr3:9122650-9123402 FORWARD LENGTH=250 | 201606)

HSP 1 Score: 124.02 bits (310), Expect = 1.949e-34
Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 0 
Query:  125 MNLAAALAAERQMRGSEESSGGERGT-PWRVSLMKLLEETEV---------ESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            + L A LA ER +   EE +  ER   P R+SLM+LLEE E          E+E     +  ++  CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +ILE+LD+F
Sbjct:  136 IRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEEEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
[Close]
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT4G13100.4 (| RING/U-box superfamily protein | Chr4:7636547-7637498 REVERSE LENGTH=256 | 201606)

HSP 1 Score: 107.071 bits (266), Expect = 5.492e-28
Identity = 61/125 (48.80%), Postives = 72/125 (57.60%), Query Frame = 0 
Query:  125 MNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEET-----------EVESESTTTVMEGSDSV---------CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            + L   LAAER           E   P R+SLM+LLE+            EVE E       G ++V         CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +IL++LDIF
Sbjct:  143 LRLGTVLAAER-----------EEMQPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 256
[Close]
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT4G13100.9 (| RING/U-box superfamily protein | Chr4:7636547-7637507 REVERSE LENGTH=259 | 201606)

HSP 1 Score: 107.071 bits (266), Expect = 5.551e-28
Identity = 61/125 (48.80%), Postives = 72/125 (57.60%), Query Frame = 0 
Query:  125 MNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEET-----------EVESESTTTVMEGSDSV---------CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            + L   LAAER           E   P R+SLM+LLE+            EVE E       G ++V         CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +IL++LDIF
Sbjct:  146 LRLGTVLAAER-----------EEMQPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 259
[Close]
BLAST of Psat04G0013600-T1 vs. Araport11
Match: AT4G13100.8 (| RING/U-box superfamily protein | Chr4:7636547-7637507 REVERSE LENGTH=259 | 201606)

HSP 1 Score: 107.071 bits (266), Expect = 5.551e-28
Identity = 61/125 (48.80%), Postives = 72/125 (57.60%), Query Frame = 0 
Query:  125 MNLAAALAAERQMRGSEESSGGERGTPWRVSLMKLLEET-----------EVESESTTTVMEGSDSV---------CCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 229
            + L   LAAER           E   P R+SLM+LLE+            EVE E       G ++V         CCVCM R KGAAFIPCGHTFCR+CSRELW+ RGNCPLCN +IL++LDIF
Sbjct:  146 LRLGTVLAAER-----------EEMQPPRMSLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGEAVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 259
The following BLAST results are available for this feature:
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-09 (Blastp of Pisum sativum cv. Zhongwan6 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|G7JKF7|G7JKF7_MEDTR6.338e-10876.44Putative transcription factor C2H2 family OS=Medic... [more]
tr|A0A2K3JT98|A0A2K3JT98_TRIPR5.954e-10676.26RING/U-box domain-containing protein OS=Trifolium ... [more]
tr|A0A2Z6LHM0|A0A2Z6LHM0_TRISU2.439e-9772.15RING-type domain-containing protein OS=Trifolium s... [more]
tr|A0A445K2D0|A0A445K2D0_GLYSO5.232e-8664.13RING-type domain-containing protein OS=Glycine soj... [more]
tr|I1KNH8|I1KNH8_SOYBN7.588e-8664.13RING-type domain-containing protein OS=Glycine max... [more]
tr|A0A445G0K8|A0A445G0K8_GLYSO1.364e-8267.12RING-type domain-containing protein OS=Glycine soj... [more]
tr|I1MR22|I1MR22_SOYBN1.364e-8267.12RING-type domain-containing protein OS=Glycine max... [more]
tr|A0A371F6B2|A0A371F6B2_MUCPR3.535e-8164.32RING-type domain-containing protein (Fragment) OS=... [more]
tr|A0A1S2YP08|A0A1S2YP08_CICAR1.060e-7968.49E3 ubiquitin-protein ligase COP1 OS=Cicer arietinu... [more]
tr|A0A0S3S3U7|A0A0S3S3U7_PHAAN4.466e-7659.82RING-type domain-containing protein OS=Vigna angul... [more]
back to top
BLAST of Psat04G0013600-T1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-09 (Blastp of Pisum sativum cv. Zhongwan6 proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Psat04G0013600-T1 vs. Araport11
Analysis Date: 2023-05-09 (Blastp of Pisum sativum cv. Zhongwan6 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT4G03965.13.478e-5749.34| RING/U-box superfamily protein | Chr4:1889576-18... [more]
AT4G22250.13.723e-5552.43| RING/U-box superfamily protein | Chr4:11767685-1... [more]
AT1G62370.12.356e-4442.73| RING/U-box superfamily protein | Chr1:23072575-2... [more]
AT3G25030.33.733e-3644.30| RING/U-box superfamily protein | Chr3:9122650-91... [more]
AT3G25030.41.949e-3453.91| RING/U-box superfamily protein | Chr3:9122650-91... [more]
AT3G25030.21.949e-3453.91| RING/U-box superfamily protein | Chr3:9122650-91... [more]
AT3G25030.11.949e-3453.91| RING/U-box superfamily protein | Chr3:9122650-91... [more]
AT4G13100.45.492e-2848.80| RING/U-box superfamily protein | Chr4:7636547-76... [more]
AT4G13100.95.551e-2848.80| RING/U-box superfamily protein | Chr4:7636547-76... [more]
AT4G13100.85.551e-2848.80| RING/U-box superfamily protein | Chr4:7636547-76... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Pisum sativum cv. Zhongwan6 genome v1.0
Date Performed: 2023-05-05
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 174..228
e-value: 5.1E-13
score: 50.2
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 178..223
e-value: 2.0E-11
score: 43.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..107
NoneNo IPR availablePANTHERPTHR46629OS01G0917900 PROTEINcoord: 24..229
NoneNo IPR availableCDDcd16449RING-HCcoord: 181..218
e-value: 4.47089E-8
score: 46.3249
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 169..226
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 181..219
score: 10.851695

Sequences
The following sequences are available for this feature:

mRNA sequence

>Psat04G0013600-T1_zw6_v1 ID=Psat04G0013600-T1_zw6_v1; Name=Psat04G0013600-T1; organism=Pisum sativum; type=mRNA; length=690bp
ATGGTTGAGGTGGGGTCTGTGCCGTGCTGTTCAGTTTCTATCTACCGAGC
TAGTATGAGTCAACTCGGTCTCATATTACATGAATCGCTCCGTCCTCAAA
GAGAAGCAAGAACCTTACTCGGTTTATTAACGGAACAAATGGACGCTGCA
GATTCATCAACAACGAGGAGACGTAGTCTTAAAGAACGGTTCAGATTCAC
CGGTATCGGTGGTTGCTGTGGTGCCACTTGGGTTTTCCGTCCAATTATCA
GACACGAACATCACCACCAACAACAACAACGACAACGAGAGGGAGCAAGA
GAAGGAGAAACTAATGTAGAGCAAGAAGAACTACAGGTTCAAGATCCGAA
TCCGGATCCGTCTAGTTCCGGTATGAATCTTGCGGCGGCATTGGCGGCGG
AGCGTCAGATGAGAGGATCGGAGGAAAGTAGCGGCGGCGAAAGAGGGACG
CCGTGGAGAGTTTCGTTAATGAAACTGTTGGAGGAAACGGAAGTGGAAAG
TGAGAGTACGACGACGGTTATGGAGGGGAGTGATTCAGTGTGCTGCGTGT
GCATGGGAAGGAAGAAAGGTGCAGCGTTCATACCGTGTGGACACACTTTT
TGTAGAGTGTGTTCAAGGGAACTGTGGTTGAATCGAGGGAACTGTCCCCT
TTGTAATCGTTCTATTCTCGAGATTCTAGACATTTTCTGA
back to top

protein sequence of Psat04G0013600-T1_zw6_v1

>Psat04G0013600-T1_zw6_v1 ID=Psat04G0013600-T1_zw6_v1; Name=Psat04G0013600-T1_zw6_v1; organism=Pisum sativum; type=polypeptide; length=229bp
MVEVGSVPCCSVSIYRASMSQLGLILHESLRPQREARTLLGLLTEQMDAA
DSSTTRRRSLKERFRFTGIGGCCGATWVFRPIIRHEHHHQQQQRQREGAR
EGETNVEQEELQVQDPNPDPSSSGMNLAAALAAERQMRGSEESSGGERGT
PWRVSLMKLLEETEVESESTTTVMEGSDSVCCVCMGRKKGAAFIPCGHTF
CRVCSRELWLNRGNCPLCNRSILEILDIF
back to top

mRNA from alignment at chr4:8078038..8080239-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Psat04G0013600-T1_zw6_v1 ID=Psat04G0013600-T1_zw6_v1; Name=Psat04G0013600-T1; organism=Pisum sativum; type=mRNA; length=2202bp; location=Sequence derived from: chr4:8078038..8080239- (Pisum sativum
ATGGTTGAGGTGGGGTCTGTGCCGTGCTGTTCAGGTAGATTGGTGGTGAT
TGGAATTTCTGATTTATGATTATATTAGTCTTGAGTTCCTTGGTTTTCTG
ATTTTTAGTTTGGTCTGGTGTTGTTAGATGGTAGTGGTAACATGTTGAAC
ATTAGTAGGAGACTTGTTTCTCTTATTTATATTCAATTCAGCAGGAATCA
ATCTTTAACTCTGGCAGACCTAGTTATATTGTGTTGGAGGATTTATTTGT
TTTCTTTCTAATGCCAACATTTTAGGAGGTTTTCAAATATTGGATAGTCT
TTAATGTATTTCCTAGTTTATCTATTGGCGGTGAATGCATCAGAATCAAG
AAAGAATCGGTCTAGGATTCTTTTAGTTGGCGTGCAGTTTGAATCTTTAT
TGTTTTGTGCAGATTGAAGCCTAATTGATTTTAGTAGAATCAGTGTGTGT
TTATTGGTCAAGAATTATTCGCCTGCCGAAATTTTTGAAGGAATTAGCGG
TTGTGGTGTATACCCGAAGATTTTCCGGTGTGTTTCATTAGTTAGACAGT
GATCATTGAGTAAATAGCCAATATCTAGCAGTTCTTCACCTTGAGCTTTT
AGTGGTCCAATTTTCCGATCGGAGCCTGCCATATTGTGTTTGCGTTCAGG
TCATCTTTGGTCTGCTTAACTGGACAACATGTTTTGGGTTTGCCTATTTG
TGTTGGTAGTTGTTTTGTGGAAGGTGCCACGAATTTTCTAAAATTGTCTA
AGAGTTTTATTCTGGATGTTTTTCTGCTTTTGGATATTTTCTTGTGCTTC
TTTTTTGGAGTTCCGGTGCTTTTCGGCCGCACTAGTGCATGTTGTTGGTT
TTTACTTATGTTACTCTCGTAGACTATCATCGAATGGTCAGTCCCATCAA
GCTTTCGTTCCTGAACATTGATTCTCAAAATTTCAAATTTGTTGTTGGTG
GTTGCATCAAGGAAGGTTTGGGTGTGGTGGTTGATCATGAAATGCATAAT
AATTATTTAACTAAGTTTGAATTAATACACAATATTTTTAGTCATAAATA
GCATAATTTTTTTCTTCATTATTACTAAAATTACAAATTTATCGTACAAG
GTACAAAAACGAAATAATGGAAAGTAATTAATGAGGGAAGGGGCCCAAAT
GCAAATATAGTAAAGTGGTCAAGACTATGCAGAGTCTGTACGTAACGTAA
TTTTCGTTATAACCTGAATTCGGAAATTTTGGGTATACAACTCAAACAAC
AAATAACCTCAATTCATTAATTTATCACAACCGTTTCCTCATCTCTCTCT
CTCTCTTAAGTCTCAATCTCTCTATTTTGTCCATCTCTAAAATTTCACTT
CTCTTCCCATCATTTGAGTTTTTTCTTTTATCTTATCTCTCTCACACAAA
CTTCCAAACAACTTTCTAATTTGAACAAAAGAATCTCCAAATCAAACTAT
TTTAAACCTTGCATTTCTTTGGACACTTCTATTCAACTCTACCGTACACC
GCATCTCACCGGATCTCGCTCCGTTTTTTTATTTTTAATTTTGCAGTTTC
TATCTACCGAGCTAGTATGAGTCAACTCGGTCTCATATTACATGAATCGC
TCCGTCCTCAAAGAGAAGCAAGAACCTTACTCGGTTTATTAACGGAACAA
ATGGACGCTGCAGATTCATCAACAACGAGGAGACGTAGTCTTAAAGAACG
GTTCAGATTCACCGGTATCGGTGGTTGCTGTGGTGCCACTTGGGTTTTCC
GTCCAATTATCAGACACGAACATCACCACCAACAACAACAACGACAACGA
GAGGGAGCAAGAGAAGGAGAAACTAATGTAGAGCAAGAAGAACTACAGGT
TCAAGATCCGAATCCGGATCCGTCTAGTTCCGGTATGAATCTTGCGGCGG
CATTGGCGGCGGAGCGTCAGATGAGAGGATCGGAGGAAAGTAGCGGCGGC
GAAAGAGGGACGCCGTGGAGAGTTTCGTTAATGAAACTGTTGGAGGAAAC
GGAAGTGGAAAGTGAGAGTACGACGACGGTTATGGAGGGGAGTGATTCAG
TGTGCTGCGTGTGCATGGGAAGGAAGAAAGGTGCAGCGTTCATACCGTGT
GGACACACTTTTTGTAGAGTGTGTTCAAGGGAACTGTGGTTGAATCGAGG
GAACTGTCCCCTTTGTAATCGTTCTATTCTCGAGATTCTAGACATTTTCT
GA
back to top

Coding sequence (CDS) from alignment at chr4:8078038..8080239-

>Psat04G0013600-T1_zw6_v1 ID=Psat04G0013600-T1_zw6_v1; Name=Psat04G0013600-T1; organism=Pisum sativum; type=CDS; length=690bp; location=Sequence derived from: chr4:8078038..8080239- (Pisum sativum
ATGGTTGAGGTGGGGTCTGTGCCGTGCTGTTCAGTTTCTATCTACCGAGC
TAGTATGAGTCAACTCGGTCTCATATTACATGAATCGCTCCGTCCTCAAA
GAGAAGCAAGAACCTTACTCGGTTTATTAACGGAACAAATGGACGCTGCA
GATTCATCAACAACGAGGAGACGTAGTCTTAAAGAACGGTTCAGATTCAC
CGGTATCGGTGGTTGCTGTGGTGCCACTTGGGTTTTCCGTCCAATTATCA
GACACGAACATCACCACCAACAACAACAACGACAACGAGAGGGAGCAAGA
GAAGGAGAAACTAATGTAGAGCAAGAAGAACTACAGGTTCAAGATCCGAA
TCCGGATCCGTCTAGTTCCGGTATGAATCTTGCGGCGGCATTGGCGGCGG
AGCGTCAGATGAGAGGATCGGAGGAAAGTAGCGGCGGCGAAAGAGGGACG
CCGTGGAGAGTTTCGTTAATGAAACTGTTGGAGGAAACGGAAGTGGAAAG
TGAGAGTACGACGACGGTTATGGAGGGGAGTGATTCAGTGTGCTGCGTGT
GCATGGGAAGGAAGAAAGGTGCAGCGTTCATACCGTGTGGACACACTTTT
TGTAGAGTGTGTTCAAGGGAACTGTGGTTGAATCGAGGGAACTGTCCCCT
TTGTAATCGTTCTATTCTCGAGATTCTAGACATTTTCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING