Vfaba.Tiffany.R1.3g041360.1

Transcript Overview


Name	Vfaba.Tiffany.R1.3g041360.1
Unique Name	Vfaba.Tiffany.R1.3g041360.1_tif_v1
Type	mRNA
Organism	Vicia faba (Faba bean)
Sequence length	501

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr3	chromosome	chr3:285033893..285034393 +	Vicia faba cv. Tiffany genome v1.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vicia faba cv. Tiffany genome v1.0	2023-05-02
InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot	2023-05-10
Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11	2023-05-10

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
tifzwsR270	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
tifzwsR317	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
astifL378	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
astifL418	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
astifL663	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
catifL043	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
catifL208	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
catifL311	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
catifL512	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
crtifL256	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
cctifL0752	Cajanus cajan Asha genome v1.0	Cajanus cajan
crtifL394	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
crtifL538	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
tiftifL090	Vicia faba cv. Tiffany genome v1.0	Vicia faba
pvtifL038	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
tiftifR209	Vicia faba cv. Tiffany genome v1.0	Vicia faba
tiftifR215	Vicia faba cv. Tiffany genome v1.0	Vicia faba
pvtifL506	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pstifL622	Pisum sativum Cameor genome v1a	Pisum sativum
pstifL668	Pisum sativum Cameor genome v1a	Pisum sativum
pvtifL609	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
tifvfhR198	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
tifvfhR220	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
tifvuR351	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvuR358	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvuR390	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvuR432	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
tifvfhR265	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
caitifL076	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
antifL0105	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
caitifL250	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
antifL0174	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
caitifL442	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caitifL446	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
antifL0282	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL0574	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL0762	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL0890	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
antifL1212	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
tifvrvR334	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
tifvrvR345	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
tifvrvR352	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
tifvuaR303	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvuaR306	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvuaR332	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvssR343	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
tifvuaR370	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
tifvssR363	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
tifvssR381	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
tifvssR414	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
cantifL042	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
cantifL171	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
cantifL256	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum

Orthologs


Gene/Transcript	Assembly	Species
Ca_00521.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
jg9358.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Psat06G0194300-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
jg1438.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Cr_11248.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
rna-TanjilR_30202	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-TanjilR_17142	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Phvul.007G220300.2	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
rna-XM_004487053.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
Ca_17133	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Psat6g066760.1	Pisum sativum Cameor genome v1a	Pisum sativum
Ca_11074.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
Vigun07g070300.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
rna-TanjilR_04306	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-XM_014636758.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
evm.model.Chr11.1343	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Ca_02534	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
rna-XM_004497445.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
jg43641.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
evm.model.Chr07.2214	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Vigun11g142300.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Ca_14567	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vfaba.Hedin2.R1.3g049280.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Vfaba.Tiffany.R1.1g027880.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
Vfaba.Hedin2.R1.1g040440.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Vfaba.Tiffany.R1.6g022160.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.3g041360	Vfaba.Tiffany.R1.3g041360_tif_v1	Vicia faba	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.3g041360.1_tif_v1-exon	Vfaba.Tiffany.R1.3g041360.1_tif_v1-exon-chr3_tif_v1:285033893..285034393	Vicia faba	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.3g041360.1_tif_v1-cds	Vfaba.Tiffany.R1.3g041360.1_tif_v1-cds-chr3_tif_v1:285033893..285034393	Vicia faba	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vfaba.Tiffany.R1.3g041360.1_tif_v1	Vfaba.Tiffany.R1.3g041360.1_tif_v1	Vicia faba	polypeptide
Vfaba.Tiffany.R1.3g041360.1_tif_v1	Vfaba.Tiffany.R1.3g041360.1_tif_v1-protein	Vicia faba	polypeptide

Homology

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MQ71|A0A2Z6MQ71_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_29140 PE=3 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 5.699e-112
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166
            MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE
Sbjct:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y0S5|A0A1S2Y0S5_CICAR (60S ribosomal protein L12 OS=Cicer arietinum OX=3827 GN=LOC101503513 PE=3 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 1.670e-111
Identity = 163/166 (98.19%), Postives = 164/166 (98.80%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166
            MPPK DPSQVV+VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKEL GTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE
Sbjct:    1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/TrEMBL
Match: tr|I3SXZ6|I3SXZ6_MEDTR (60S ribosomal L12-like protein OS=Medicago truncatula OX=3880 GN=25484005 PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 2.373e-111
Identity = 162/166 (97.59%), Postives = 165/166 (99.40%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166
            MPPKLDPSQ+VEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAK+MKPRSMAKEL GTVKEILGTCVSVGCTVDGKDPKDLQQEI+DGDVEIPLE
Sbjct:    1 MPPKLDPSQIVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGDVEIPLE 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XEN9|A0A1S2XEN9_CICAR (60S ribosomal protein L12-like OS=Cicer arietinum OX=3827 GN=LOC101512668 PE=3 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 8.759e-111
Identity = 162/165 (98.18%), Postives = 163/165 (98.79%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPL 165
            MPPK DPSQVV+VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKEL GTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPL
Sbjct:    1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPL 165

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/TrEMBL
Match: tr|B7FH91|B7FH91_MEDTR (60S ribosomal L12-like protein OS=Medicago truncatula OX=3880 GN=11412068 PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 1.103e-110
Identity = 161/164 (98.17%), Postives = 163/164 (99.39%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
            MPPKLDPSQ+VEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAK+MKPRSMAKEL GTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP
Sbjct:    1 MPPKLDPSQIVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MVZ2|A0A2K3MVZ2_TRIPR (60S ribosomal protein l12-like OS=Trifolium pratense OX=57577 GN=L195_g018162 PE=3 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 1.315e-110
Identity = 162/166 (97.59%), Postives = 165/166 (99.40%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166
            MPPKLDPSQVVEV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEI+DGDVEIPLE
Sbjct:    1 MPPKLDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGDVEIPLE 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/TrEMBL
Match: tr|V4SG68|V4SG68_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10029416mg PE=3 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 4.300e-110
Identity = 159/166 (95.78%), Postives = 164/166 (98.80%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166
            MPPK DPSQVV+VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNI+LDDVIEIAK+M+PRSMAKEL GTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPL+
Sbjct:    1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLD 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A067GD54|A0A067GD54_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g031095mg PE=3 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 4.300e-110
Identity = 159/166 (95.78%), Postives = 164/166 (98.80%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166
            MPPK DPSQVV+VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNI+LDDVIEIAK+M+PRSMAKEL GTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPL+
Sbjct:    1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNITLDDVIEIAKIMRPRSMAKELSGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLD 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6LH07|A0A2Z6LH07_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_97520 PE=3 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 7.525e-110
Identity = 161/164 (98.17%), Postives = 162/164 (98.78%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
            MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHNGNISLDDVIEIAKVMKPRSMAKEL GTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP
Sbjct:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKVKNIKHNGNISLDDVIEIAKVMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/TrEMBL
Match: tr|A0A314L9N3|A0A314L9N3_NICAT (60s ribosomal protein l12 OS=Nicotiana attenuata OX=49451 GN=RPL12_6 PE=3 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 3.032e-109
Identity = 159/166 (95.78%), Postives = 164/166 (98.80%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166
            MPPK DPSQVVEV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAK+L GTVKEILGTCVSVGCTVDGKDPKDLQQEI+DGDVEIPL+
Sbjct:    1 MPPKFDPSQVVEVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGDVEIPLD 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/Swiss-Prot
Match: sp|O50003|RL12_PRUAR (60S ribosomal protein L12 OS=Prunus armeniaca OX=36596 GN=RPL12 PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 1.881e-107
Identity = 154/166 (92.77%), Postives = 160/166 (96.39%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166
            MPPK DPSQVV+VYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETA DWKGLRVTVKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH+G+ISLDDVIEIAK+MK RSMAKEL GTVKEIL TCVSVGCTVDGKDPKDLQQEI DGDVEIPL+
Sbjct:    1 MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETANDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGHISLDDVIEIAKIMKHRSMAKELAGTVKEILRTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9FF52|RL123_ARATH (60S ribosomal protein L12-3 OS=Arabidopsis thaliana OX=3702 GN=RPL12C PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 1.283e-106
Identity = 150/166 (90.36%), Postives = 160/166 (96.39%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166
            MPPKLDPSQ+V+VYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDVIEIAK+M+PRS+AKEL GTVKEILGTCVSVGCTVDGKDPKDLQ+EIN GD++IP E
Sbjct:    1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPRSIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPNE 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/Swiss-Prot
Match: sp|P50883|RL121_ARATH (60S ribosomal protein L12-1 OS=Arabidopsis thaliana OX=3702 GN=RPL12A PE=2 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 2.454e-105
Identity = 147/164 (89.63%), Postives = 158/164 (96.34%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
            MPPKLDPSQ+V+VYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDV EIA++M+PRS+AKEL GTV+EILGTCVSVGCTVDGKDPKD+QQEI DG+VEIP
Sbjct:    1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LFH5|RL122_ARATH (60S ribosomal protein L12-2 OS=Arabidopsis thaliana OX=3702 GN=RPL12B PE=1 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 5.711e-105
Identity = 146/164 (89.02%), Postives = 158/164 (96.34%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
            MPPKLDPSQ+V+VYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDV EIA++M+PRS+AKEL GTV+EILGTCVSVGCTVDGKDPKDLQQEI +G++EIP
Sbjct:    1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIP 164

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/Swiss-Prot
Match: sp|P0CT84|RL12B_SCHPO (60S ribosomal protein L12-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1202 PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 8.413e-85
Identity = 118/166 (71.08%), Postives = 145/166 (87.35%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166
            MPPK DP++V  +++R  GGEV   S+LAPKIGPLGLSPKK+GEDIAK T KDWKGLRVTVKLT+QNRQA V+VVPSA+ALVIKALKEP RDRKK KN+ H+GN+SLD++IE+A+ M+ +S+AKEL GTVKEILGT  SVGCTVDGK+P D+Q+EI++G++EIP E
Sbjct:    1 MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKAT-KDWKGLRVTVKLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFKSLAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIPQE 165

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/Swiss-Prot
Match: sp|P0CT83|RL12A_SCHPO (60S ribosomal protein L12-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1201 PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 8.413e-85
Identity = 118/166 (71.08%), Postives = 145/166 (87.35%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166
            MPPK DP++V  +++R  GGEV   S+LAPKIGPLGLSPKK+GEDIAK T KDWKGLRVTVKLT+QNRQA V+VVPSA+ALVIKALKEP RDRKK KN+ H+GN+SLD++IE+A+ M+ +S+AKEL GTVKEILGT  SVGCTVDGK+P D+Q+EI++G++EIP E
Sbjct:    1 MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKAT-KDWKGLRVTVKLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFKSLAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIPQE 165

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/Swiss-Prot
Match: sp|P50884|RL12_CHLRE (60S ribosomal protein L12 (Fragment) OS=Chlamydomonas reinhardtii OX=3055 GN=RPL12 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.266e-82
Identity = 121/155 (78.06%), Postives = 137/155 (88.39%), Query Frame = 0

Query:   10 VVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
            VVEV VRVTGGEVG ASSLAPKIGPLGLSPKKIGEDIAKET KDWKGLR+TVKLTVQNRQAK++V+PSAAALVIKALKEP RDRKK KNIKH G++++ D+IEIA+VM+PRS AK+L    KEILGT VSVGC VDGKDP+D+   I+DG +EIP
Sbjct:    1 VVEVCVRVTGGEVGDASSLAPKIGPLGLSPKKIGEDIAKETLKDWKGLRITVKLTVQNRQAKISVIPSAAALVIKALKEPARDRKKEKNIKHTGSVTMSDIIEIARVMRPRSCAKDLANGCKEILGTAVSVGCKVDGKDPRDVISAIDDGAIEIP 155

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/Swiss-Prot
Match: sp|P23358|RL12_RAT (60S ribosomal protein L12 OS=Rattus norvegicus OX=10116 GN=Rpl12 PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 8.845e-81
Identity = 113/164 (68.90%), Postives = 138/164 (84.15%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
            MPPK DP+++  VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T  DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKHNGNI+ D+++ IA+ M+ RS+A+EL GT+KEILGT  SVGC VDG+ P D+  +IN G VE P
Sbjct:    1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHNGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/Swiss-Prot
Match: sp|P35979|RL12_MOUSE (60S ribosomal protein L12 OS=Mus musculus OX=10090 GN=Rpl12 PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 4.239e-80
Identity = 113/164 (68.90%), Postives = 138/164 (84.15%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
            MPPK DP++V  VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T  DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNI+ D+++ IA+ M+ RS+A+EL GT+KEILGT  SVGC VDG+ P D+  +IN G VE P
Sbjct:    1 MPPKFDPNEVKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/Swiss-Prot
Match: sp|P30050|RL12_HUMAN (60S ribosomal protein L12 OS=Homo sapiens OX=9606 GN=RPL12 PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.761e-80
Identity = 112/164 (68.29%), Postives = 138/164 (84.15%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
            MPPK DP+++  VY+R TGGEVGA S+LAPKIGPLGLSPKK+G+DIAK T  DWKGLR+TVKLT+QNRQA++ VVPSA+AL+IKALKEP RDRKK KNIKH+GNI+ D+++ IA+ M+ RS+A+EL GT+KEILGT  SVGC VDG+ P D+  +IN G VE P
Sbjct:    1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATG-DWKGLRITVKLTIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDIIDDINSGAVECP 163

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. Araport11
Match: AT5G60670.1 (| Ribosomal protein L11 family protein | Chr5:24381066-24381566 REVERSE LENGTH=166 | 201606)

HSP 1 Score: 304.679 bits (779), Expect = 1.313e-107
Identity = 150/166 (90.36%), Postives = 160/166 (96.39%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPLE 166
            MPPKLDPSQ+V+VYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDVIEIAK+M+PRS+AKEL GTVKEILGTCVSVGCTVDGKDPKDLQ+EIN GD++IP E
Sbjct:    1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPRSIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPNE 166

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. Araport11
Match: AT2G37190.1 (| Ribosomal protein L11 family protein | Chr2:15619559-15620059 REVERSE LENGTH=166 | 201606)

HSP 1 Score: 301.212 bits (770), Expect = 2.510e-106
Identity = 147/164 (89.63%), Postives = 158/164 (96.34%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
            MPPKLDPSQ+V+VYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDV EIA++M+PRS+AKEL GTV+EILGTCVSVGCTVDGKDPKD+QQEI DG+VEIP
Sbjct:    1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIP 164

[Close]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. Araport11
Match: AT3G53430.1 (| Ribosomal protein L11 family protein | Chr3:19809895-19810395 REVERSE LENGTH=166 | 201606)

HSP 1 Score: 300.442 bits (768), Expect = 5.843e-106
Identity = 146/164 (89.02%), Postives = 158/164 (96.34%), Query Frame = 0

Query:    1 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIP 164
            MPPKLDPSQ+V+VYVRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAK+WKGLRVTVKLTVQNRQAKV VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDV EIA++M+PRS+AKEL GTV+EILGTCVSVGCTVDGKDPKDLQQEI +G++EIP
Sbjct:    1 MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPRSIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIP 164

The following BLAST results are available for this feature:

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/TrEMBL
BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/Swiss-Prot
BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. Araport11

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A2Z6MQ71\|A0A2Z6MQ71_TRISU	5.699e-112	98.80	Uncharacterized protein OS=Trifolium subterraneum ...	[more]
tr\|A0A1S2Y0S5\|A0A1S2Y0S5_CICAR	1.670e-111	98.19	60S ribosomal protein L12 OS=Cicer arietinum OX=38...	[more]
tr\|I3SXZ6\|I3SXZ6_MEDTR	2.373e-111	97.59	60S ribosomal L12-like protein OS=Medicago truncat...	[more]
tr\|A0A1S2XEN9\|A0A1S2XEN9_CICAR	8.759e-111	98.18	60S ribosomal protein L12-like OS=Cicer arietinum ...	[more]
tr\|B7FH91\|B7FH91_MEDTR	1.103e-110	98.17	60S ribosomal L12-like protein OS=Medicago truncat...	[more]
tr\|A0A2K3MVZ2\|A0A2K3MVZ2_TRIPR	1.315e-110	97.59	60S ribosomal protein l12-like OS=Trifolium praten...	[more]
tr\|V4SG68\|V4SG68_CITCL	4.300e-110	95.78	Uncharacterized protein OS=Citrus clementina OX=85...	[more]
tr\|A0A067GD54\|A0A067GD54_CITSI	4.300e-110	95.78	Uncharacterized protein OS=Citrus sinensis OX=2711...	[more]
tr\|A0A2Z6LH07\|A0A2Z6LH07_TRISU	7.525e-110	98.17	Uncharacterized protein OS=Trifolium subterraneum ...	[more]
tr\|A0A314L9N3\|A0A314L9N3_NICAT	3.032e-109	95.78	60s ribosomal protein l12 OS=Nicotiana attenuata O...	[more]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs UniProt Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
sp\|O50003\|RL12_PRUAR	1.881e-107	92.77	60S ribosomal protein L12 OS=Prunus armeniaca OX=3...	[more]
sp\|Q9FF52\|RL123_ARATH	1.283e-106	90.36	60S ribosomal protein L12-3 OS=Arabidopsis thalian...	[more]
sp\|P50883\|RL121_ARATH	2.454e-105	89.63	60S ribosomal protein L12-1 OS=Arabidopsis thalian...	[more]
sp\|Q9LFH5\|RL122_ARATH	5.711e-105	89.02	60S ribosomal protein L12-2 OS=Arabidopsis thalian...	[more]
sp\|P0CT84\|RL12B_SCHPO	8.413e-85	71.08	60S ribosomal protein L12-B OS=Schizosaccharomyces...	[more]
sp\|P0CT83\|RL12A_SCHPO	8.413e-85	71.08	60S ribosomal protein L12-A OS=Schizosaccharomyces...	[more]
sp\|P50884\|RL12_CHLRE	1.266e-82	78.06	60S ribosomal protein L12 (Fragment) OS=Chlamydomo...	[more]
sp\|P23358\|RL12_RAT	8.845e-81	68.90	60S ribosomal protein L12 OS=Rattus norvegicus OX=...	[more]
sp\|P35979\|RL12_MOUSE	4.239e-80	68.90	60S ribosomal protein L12 OS=Mus musculus OX=10090...	[more]
sp\|P30050\|RL12_HUMAN	5.761e-80	68.29	60S ribosomal protein L12 OS=Homo sapiens OX=9606 ...	[more]

BLAST of Vfaba.Tiffany.R1.3g041360.1 vs. Araport11
Analysis Date: 2023-05-10 (Blastp of Vicia faba cv. Tiffany genome v1.0 proteins vs arabidopsis Araport11)
Total hits: 3


Match Name	E-value	Identity	Description
AT5G60670.1	1.313e-107	90.36	\| Ribosomal protein L11 family protein \| Chr5:2438...	[more]
AT2G37190.1	2.510e-106	89.63	\| Ribosomal protein L11 family protein \| Chr2:1561...	[more]
AT3G53430.1	5.843e-106	89.02	\| Ribosomal protein L11 family protein \| Chr3:1980...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vicia faba cv. Tiffany genome v1.0 proteins
Date Performed: 2023-05-10


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020784	Ribosomal protein L11, N-terminal	PFAM	PF03946	Ribosomal_L11_N	coord: 13..69 e-value: 1.7E-18 score: 66.2
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	GENE3D	3.30.1550.10		coord: 1..81 e-value: 1.7E-35 score: 122.8
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	SUPERFAMILY	54747	Ribosomal L11/L12e N-terminal domain	coord: 1..87
IPR020783	Ribosomal protein L11, C-terminal	PFAM	PF00298	Ribosomal_L11	coord: 75..144 e-value: 4.9E-16 score: 59.0
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	GENE3D	1.10.10.250		coord: 82..164 e-value: 1.4E-40 score: 139.3
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	SUPERFAMILY	46906	Ribosomal protein L11, C-terminal domain	coord: 76..149
IPR000911	Ribosomal protein L11/L12	PANTHER	PTHR11661	60S RIBOSOMAL PROTEIN L12	coord: 1..151
IPR000911	Ribosomal protein L11/L12	HAMAP	MF_00736	Ribosomal_L11	coord: 9..146 score: 15.563334
IPR000911	Ribosomal protein L11/L12	CDD	cd00349	Ribosomal_L11	coord: 13..144 e-value: 1.94069E-50 score: 156.457

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:285033893..285034393+

mRNA sequence

>Vfaba.Tiffany.R1.3g041360.1_tif_v1 ID=Vfaba.Tiffany.R1.3g041360.1_tif_v1; Name=Vfaba.Tiffany.R1.3g041360.1; organism=Vicia faba; type=mRNA; length=501bp
ATGCCTCCAAAACTCGATCCTTCCCAGGTCGTTGAAGTCTACGTCCGCGT
AACCGGAGGCGAAGTCGGCGCCGCCAGTTCCCTCGCCCCAAAGATCGGTC
CTCTCGGTCTCTCCCCAAAAAAGATCGGAGAGGACATCGCGAAAGAAACA
GCAAAGGACTGGAAGGGTCTCCGCGTGACAGTCAAACTAACCGTGCAAAA
TCGGCAAGCGAAGGTTGCGGTGGTTCCATCTGCCGCGGCGCTGGTTATCA
AGGCCTTGAAGGAGCCCGAGAGAGACCGGAAGAAGACGAAGAATATTAAG
CATAATGGGAATATTTCTCTTGATGATGTTATTGAGATTGCGAAGGTGAT
GAAGCCGAGATCGATGGCGAAGGAGCTTGGTGGGACGGTGAAGGAGATTC
TGGGAACTTGTGTTTCGGTTGGGTGTACTGTAGATGGGAAGGATCCCAAG
GATTTGCAACAGGAGATTAATGATGGGGATGTTGAGATTCCTTTGGAATA
G

protein sequence of Vfaba.Tiffany.R1.3g041360.1_tif_v1

>Vfaba.Tiffany.R1.3g041360.1_tif_v1 ID=Vfaba.Tiffany.R1.3g041360.1_tif_v1; Name=Vfaba.Tiffany.R1.3g041360.1_tif_v1; organism=Vicia faba; type=polypeptide; length=166bp
MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKET
AKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIK
HNGNISLDDVIEIAKVMKPRSMAKELGGTVKEILGTCVSVGCTVDGKDPK
DLQQEINDGDVEIPLE

mRNA from alignment at chr3:285033893..285034393+

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vfaba.Tiffany.R1.3g041360.1_tif_v1 ID=Vfaba.Tiffany.R1.3g041360.1_tif_v1; Name=Vfaba.Tiffany.R1.3g041360.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:285033893..285034393+ (Vicia faba

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR020784	Ribosomal_uL11_N
IPR036796	Ribosomal_uL11_N_sf
IPR020783	Ribosomal_uL11_C
IPR036769	Ribosomal_uL11_C_sf
IPR000911	Ribosomal_uL11

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome

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Vfaba.Tiffany.R1.3g041360.1