Vfaba.Hedin2.R1.2g042320.1

Transcript Overview
NameVfaba.Hedin2.R1.2g042320.1
Unique NameVfaba.Hedin2.R1.2g042320.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length609
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr2chromosomechr2:245012833..245017313 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR174Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhzwsR234Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
ccvfhL0425Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0591Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0815Cajanus cajan Asha genome v1.0Cajanus cajan
vfhvfhL006Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuR251Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR267Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvrvR295Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvssR217Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR231Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR231Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvuaR258Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvumR242Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR322Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR357Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR361Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR256Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR329Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvstR231Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR295Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR331Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR338Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvunR229Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR245Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g042320Vfaba.Hedin2.R1.2g042320_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g042320.1_vfh_v1-exonVfaba.Hedin2.R1.2g042320.1_vfh_v1-exon-chr2_vfh_v1:245012833..245013031Vicia fabaexon
Vfaba.Hedin2.R1.2g042320.1_vfh_v1-exonVfaba.Hedin2.R1.2g042320.1_vfh_v1-exon-chr2_vfh_v1:245013237..245013339Vicia fabaexon
Vfaba.Hedin2.R1.2g042320.1_vfh_v1-exonVfaba.Hedin2.R1.2g042320.1_vfh_v1-exon-chr2_vfh_v1:245013430..245013484Vicia fabaexon
Vfaba.Hedin2.R1.2g042320.1_vfh_v1-exonVfaba.Hedin2.R1.2g042320.1_vfh_v1-exon-chr2_vfh_v1:245017062..245017313Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g042320.1_vfh_v1-cdsVfaba.Hedin2.R1.2g042320.1_vfh_v1-cds-chr2_vfh_v1:245012833..245013031Vicia fabaCDS
Vfaba.Hedin2.R1.2g042320.1_vfh_v1-cdsVfaba.Hedin2.R1.2g042320.1_vfh_v1-cds-chr2_vfh_v1:245013237..245013339Vicia fabaCDS
Vfaba.Hedin2.R1.2g042320.1_vfh_v1-cdsVfaba.Hedin2.R1.2g042320.1_vfh_v1-cds-chr2_vfh_v1:245013430..245013484Vicia fabaCDS
Vfaba.Hedin2.R1.2g042320.1_vfh_v1-cdsVfaba.Hedin2.R1.2g042320.1_vfh_v1-cds-chr2_vfh_v1:245017062..245017313Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.2g042320.1_vfh_v1Vfaba.Hedin2.R1.2g042320.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.2g042320.1_vfh_v1Vfaba.Hedin2.R1.2g042320.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/TrEMBL
Match: tr|V7BRY5|V7BRY5_PHAVU (Prohibitin OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G009100g PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.111e-45
Identity = 72/77 (93.51%), Postives = 76/77 (98.70%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRGILD ++GEGTHFLIPWVQKPYIFDI+TRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDE+V
Sbjct:   47 FRGILDSTVGEGTHFLIPWVQKPYIFDIRTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/TrEMBL
Match: tr|T2DPD9|T2DPD9_PHAVU (Prohibitin OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.390e-45
Identity = 72/77 (93.51%), Postives = 76/77 (98.70%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRGILD ++GEGTHFLIPWVQKPYIFDI+TRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDE+V
Sbjct:   47 FRGILDSTVGEGTHFLIPWVQKPYIFDIRTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A392R4S8|A0A392R4S8_9FABA (Prohibitin (Fragment) OS=Trifolium medium OX=97028 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 3.066e-45
Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRGILD+SIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDT  LP IVQNLGLEYDE+V
Sbjct:   47 FRGILDQSIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTENLPTIVQNLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3DVX5|A0A1S3DVX5_CICAR (Prohibitin OS=Cicer arietinum OX=3827 GN=LOC101499876 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.571e-44
Identity = 71/77 (92.21%), Postives = 76/77 (98.70%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRGILDESIGEGTH LIPWVQKPYIFDI+TRPHTFSS+SGTKDLQMVNL+LRVLSRPDTAKLPVIVQNLGLEYD++V
Sbjct:   47 FRGILDESIGEGTHILIPWVQKPYIFDIRTRPHTFSSVSGTKDLQMVNLSLRVLSRPDTAKLPVIVQNLGLEYDDKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3P9Y1|A0A2K3P9Y1_TRIPR (Prohibitin OS=Trifolium pratense OX=57577 GN=L195_g008710 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.847e-44
Identity = 71/77 (92.21%), Postives = 74/77 (96.10%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRGILD+S+GEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDT  LP IVQNLGLEYDE+V
Sbjct:   47 FRGILDQSVGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTENLPTIVQNLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y5A1|A0A1S2Y5A1_CICAR (Prohibitin OS=Cicer arietinum OX=3827 GN=LOC101492879 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.004e-44
Identity = 71/77 (92.21%), Postives = 75/77 (97.40%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRGIL+ESIGEGTHFLIPWVQKPYIFDI+TRPHTFSSISGTKDLQMVNLTLRVLSRPDT +LP IVQNLGLEYDE+V
Sbjct:   47 FRGILEESIGEGTHFLIPWVQKPYIFDIRTRPHTFSSISGTKDLQMVNLTLRVLSRPDTQRLPTIVQNLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/TrEMBL
Match: tr|G7L8K5|G7L8K5_MEDTR (Prohibitin OS=Medicago truncatula OX=3880 GN=11426151 PE=3 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.147e-44
Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRGILD+SIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDT  LP IVQNLGLEYDE+V
Sbjct:   47 FRGILDQSIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTENLPTIVQNLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6M2X4|A0A2Z6M2X4_TRISU (Prohibitin OS=Trifolium subterraneum OX=3900 GN=TSUD_364270 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.499e-44
Identity = 71/77 (92.21%), Postives = 74/77 (96.10%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRGILD+S+GEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDT  LP IVQNLGLEYDE+V
Sbjct:   47 FRGILDQSVGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTENLPTIVQNLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6P5NLQ3|A0A6P5NLQ3_ARADU (Prohibitin OS=Arachis duranensis OX=130453 GN=LOC107487076 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.455e-44
Identity = 70/77 (90.91%), Postives = 75/77 (97.40%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRGILDE++GEGTHFLIPWVQKPYIFDI+TRPHTFSSISGTKDLQMVNLTLRVLSRPDT +LP IVQNLGLEYDE+V
Sbjct:   47 FRGILDETVGEGTHFLIPWVQKPYIFDIRTRPHTFSSISGTKDLQMVNLTLRVLSRPDTDRLPTIVQNLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NJ89|A0A2Z6NJ89_TRISU (Prohibitin OS=Trifolium subterraneum OX=3900 GN=TSUD_116620 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.223e-44
Identity = 69/77 (89.61%), Postives = 75/77 (97.40%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRGIL++S+GEGTHFLIPWVQKPYIFDI+TRPHTFSSISGTKDLQMVNLTLRVLSRPDT +LP IVQNLGLEYDE+V
Sbjct:   45 FRGILEQSVGEGTHFLIPWVQKPYIFDIRTRPHTFSSISGTKDLQMVNLTLRVLSRPDTNRLPTIVQNLGLEYDEKV 121          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/Swiss-Prot
Match: sp|O04331|PHB3_ARATH (Prohibitin-3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB3 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.423e-39
Identity = 58/77 (75.32%), Postives = 72/77 (93.51%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRG++D+++GEGTHFLIP +Q+P+IFDI+T+PHTFSSISGTKDLQMVNLTLRVLSRP+ ++LP I Q LGLEYDE+V
Sbjct:   47 FRGVMDQTVGEGTHFLIPILQRPHIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LK25|PHB4_ARATH (Prohibitin-4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB4 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 9.269e-37
Identity = 56/77 (72.73%), Postives = 70/77 (90.91%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRG+LD+++GEGTHFLIP++Q P+I+DI+T+PHTFSS SGTKDLQMVNLTLRVL RP+ ++LP I Q LGLEYDE+V
Sbjct:   47 FRGVLDQTVGEGTHFLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/Swiss-Prot
Match: sp|P40961|PHB1_YEAST (Prohibitin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PHB1 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.807e-28
Identity = 45/77 (58.44%), Postives = 62/77 (80.52%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
              G+  + +GEGTHFL+PW+QK  I+D++T+P + ++ +GTKDLQMV+LTLRVL RP+  +LP I QNLGL+YDERV
Sbjct:   44 INGVKQQVVGEGTHFLVPWLQKAIIYDVRTKPKSIATNTGTKDLQMVSLTLRVLHRPEVLQLPAIYQNLGLDYDERV 120          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/Swiss-Prot
Match: sp|P84173|PHB_CHICK (Prohibitin OS=Gallus gallus OX=9031 GN=PHB PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 9.610e-28
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRG+ D  +GEGTHFLIPWVQKP IFD ++RP     I+G+KDLQ VN+TLR+L RP TA+LP I  ++G +YDERV
Sbjct:   42 FRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERV 118          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9BKU4|PHB1_CAEEL (Mitochondrial prohibitin complex protein 1 OS=Caenorhabditis elegans OX=6239 GN=phb-1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 4.921e-27
Identity = 46/77 (59.74%), Postives = 60/77 (77.92%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            F G+ +E +GEGTHFLIPWVQKP IFDI++ P   ++I+G+KDLQ VN+TLR+L RP   +LP I  N+GL+Y ERV
Sbjct:   45 FSGVKNEVVGEGTHFLIPWVQKPIIFDIRSTPRAVTTITGSKDLQNVNITLRILHRPSPDRLPNIYLNIGLDYAERV 121          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9P7H3|PHB1_SCHPO (Prohibitin-1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=phb1 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.269e-26
Identity = 44/75 (58.67%), Postives = 59/75 (78.67%), Query Frame = 0
Query:  124 GILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            G+  + + EGTHFLIPW+QK  ++D++TRP   ++ +G+KDLQMV+LTLRVL RP+   LP I QNLGL+YDERV
Sbjct:   43 GVQKQVVQEGTHFLIPWLQKAIVYDVRTRPRNIATTTGSKDLQMVSLTLRVLHRPEVGMLPQIYQNLGLDYDERV 117          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/Swiss-Prot
Match: sp|P35232|PHB_HUMAN (Prohibitin OS=Homo sapiens OX=9606 GN=PHB PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.699e-26
Identity = 46/77 (59.74%), Postives = 59/77 (76.62%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRG+ D  +GEGTHFLIPWVQKP IFD ++RP     I+G+KDLQ VN+TLR+L RP  ++LP I  ++G +YDERV
Sbjct:   42 FRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERV 118          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q3T165|PHB_BOVIN (Prohibitin OS=Bos taurus OX=9913 GN=PHB PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.699e-26
Identity = 46/77 (59.74%), Postives = 59/77 (76.62%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRG+ D  +GEGTHFLIPWVQKP IFD ++RP     I+G+KDLQ VN+TLR+L RP  ++LP I  ++G +YDERV
Sbjct:   42 FRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERV 118          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/Swiss-Prot
Match: sp|P67779|PHB_RAT (Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.818e-26
Identity = 46/77 (59.74%), Postives = 59/77 (76.62%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRG+ D  +GEGTHFLIPWVQKP IFD ++RP     I+G+KDLQ VN+TLR+L RP  ++LP I  ++G +YDERV
Sbjct:   42 FRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIYTSIGEDYDERV 118          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/Swiss-Prot
Match: sp|P67778|PHB_MOUSE (Prohibitin OS=Mus musculus OX=10090 GN=Phb PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.818e-26
Identity = 46/77 (59.74%), Postives = 59/77 (76.62%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRG+ D  +GEGTHFLIPWVQKP IFD ++RP     I+G+KDLQ VN+TLR+L RP  ++LP I  ++G +YDERV
Sbjct:   42 FRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIYTSIGEDYDERV 118          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. Araport11
Match: AT5G40770.1 (| prohibitin 3 | Chr5:16315589-16316621 REVERSE LENGTH=277 | 201606)

HSP 1 Score: 137.502 bits (345), Expect = 9.640e-40
Identity = 58/77 (75.32%), Postives = 72/77 (93.51%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRG++D+++GEGTHFLIP +Q+P+IFDI+T+PHTFSSISGTKDLQMVNLTLRVLSRP+ ++LP I Q LGLEYDE+V
Sbjct:   47 FRGVMDQTVGEGTHFLIPILQRPHIFDIRTKPHTFSSISGTKDLQMVNLTLRVLSRPEVSRLPYIFQTLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. Araport11
Match: AT3G27280.2 (| prohibitin 4 | Chr3:10076904-10078051 FORWARD LENGTH=279 | 201606)

HSP 1 Score: 132.109 bits (331), Expect = 9.483e-38
Identity = 56/77 (72.73%), Postives = 70/77 (90.91%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRG+LD+++GEGTHFLIP++Q P+I+DI+T+PHTFSS SGTKDLQMVNLTLRVL RP+ ++LP I Q LGLEYDE+V
Sbjct:   47 FRGVLDQTVGEGTHFLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. Araport11
Match: AT3G27280.1 (| prohibitin 4 | Chr3:10076904-10078051 FORWARD LENGTH=279 | 201606)

HSP 1 Score: 132.109 bits (331), Expect = 9.483e-38
Identity = 56/77 (72.73%), Postives = 70/77 (90.91%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            FRG+LD+++GEGTHFLIP++Q P+I+DI+T+PHTFSS SGTKDLQMVNLTLRVL RP+ ++LP I Q LGLEYDE+V
Sbjct:   47 FRGVLDQTVGEGTHFLIPYLQTPHIYDIRTKPHTFSSKSGTKDLQMVNLTLRVLFRPEVSRLPYIFQTLGLEYDEKV 123          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. Araport11
Match: AT5G14300.1 (| prohibitin 5 | Chr5:4613102-4614023 FORWARD LENGTH=249 | 201606)

HSP 1 Score: 99.3673 bits (246), Expect = 2.447e-25
Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPV 185
            F GIL+E +GEGTH  IPWVQKPYIFDI+T+P+  ++ SGTKDLQMVNLTLRV+ RPD  K  V
Sbjct:   39 FEGILEEPVGEGTHRKIPWVQKPYIFDIRTKPYKINTDSGTKDLQMVNLTLRVMFRPDVVKAVV 102          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. Araport11
Match: AT4G28510.1 (| prohibitin 1 | Chr4:14084970-14086372 REVERSE LENGTH=288 | 201606)

HSP 1 Score: 88.1965 bits (217), Expect = 7.378e-21
Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  124 GILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            GI D+   EGTH +IPW ++P I+D++ RP+   S SG++DLQMV + LRVL+RP   +LP I ++LG  Y ERV
Sbjct:   53 GIKDKVYPEGTHLMIPWFERPVIYDVRARPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEIYRSLGENYSERV 127          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. Araport11
Match: AT1G03860.3 (| prohibitin 2 | Chr1:979611-981157 REVERSE LENGTH=286 | 201606)

HSP 1 Score: 85.1149 bits (209), Expect = 7.870e-20
Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 0
Query:  124 GILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            GI ++   EGTHF++PW ++P I+D++ RP+   S +G+ DLQMV + LRVL+RP   +LP I + LG  Y ERV
Sbjct:   53 GIKEKVYPEGTHFMVPWFERPIIYDVRARPYLVESTTGSHDLQMVKIGLRVLTRPMGDRLPQIYRTLGENYSERV 127          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. Araport11
Match: AT1G03860.1 (| prohibitin 2 | Chr1:979611-981157 REVERSE LENGTH=286 | 201606)

HSP 1 Score: 85.1149 bits (209), Expect = 7.870e-20
Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 0
Query:  124 GILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            GI ++   EGTHF++PW ++P I+D++ RP+   S +G+ DLQMV + LRVL+RP   +LP I + LG  Y ERV
Sbjct:   53 GIKEKVYPEGTHFMVPWFERPIIYDVRARPYLVESTTGSHDLQMVKIGLRVLTRPMGDRLPQIYRTLGENYSERV 127          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. Araport11
Match: AT2G20530.2 (| prohibitin 6 | Chr2:8842300-8843787 FORWARD LENGTH=286 | 201606)

HSP 1 Score: 85.1149 bits (209), Expect = 1.038e-19
Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  124 GILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            GI D+   EGTH +IPW ++P I+D++ +P+   S SG++DLQMV + LRVL+RP   +LP + ++LG  Y ERV
Sbjct:   51 GIKDKVYPEGTHLMIPWFERPIIYDVRAKPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEVYRSLGENYRERV 125          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. Araport11
Match: AT2G20530.1 (| prohibitin 6 | Chr2:8842300-8843787 FORWARD LENGTH=286 | 201606)

HSP 1 Score: 85.1149 bits (209), Expect = 1.038e-19
Identity = 36/75 (48.00%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  124 GILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            GI D+   EGTH +IPW ++P I+D++ +P+   S SG++DLQMV + LRVL+RP   +LP + ++LG  Y ERV
Sbjct:   51 GIKDKVYPEGTHLMIPWFERPIIYDVRAKPYLVESTSGSRDLQMVKIGLRVLTRPMADQLPEVYRSLGENYRERV 125          
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. Araport11
Match: AT5G44140.1 (| prohibitin 7 | Chr5:17762491-17763629 FORWARD LENGTH=278 | 201606)

HSP 1 Score: 76.2554 bits (186), Expect = 1.447e-16
Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = 0
Query:  122 FRGILDESIGEGTHFLIPWVQKPYIFDIKTRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERV 198
            F GI D    EGTHF IP  ++  I+D+++RP+  +S +G+ DLQ V + LRVL+RP   +LP I + LG  Y ERV
Sbjct:   51 FTGIKDRVYPEGTHFKIPLFERAIIYDVRSRPYVENSQTGSNDLQTVTIGLRVLTRPMGDRLPEIYRTLGQNYGERV 127          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|V7BRY5|V7BRY5_PHAVU1.111e-4593.51Prohibitin OS=Phaseolus vulgaris OX=3885 GN=PHAVU_... [more]
tr|T2DPD9|T2DPD9_PHAVU2.390e-4593.51Prohibitin OS=Phaseolus vulgaris OX=3885 PE=2 SV=1[more]
tr|A0A392R4S8|A0A392R4S8_9FABA3.066e-4593.51Prohibitin (Fragment) OS=Trifolium medium OX=97028... [more]
tr|A0A1S3DVX5|A0A1S3DVX5_CICAR1.571e-4492.21Prohibitin OS=Cicer arietinum OX=3827 GN=LOC101499... [more]
tr|A0A2K3P9Y1|A0A2K3P9Y1_TRIPR1.847e-4492.21Prohibitin OS=Trifolium pratense OX=57577 GN=L195_... [more]
tr|A0A1S2Y5A1|A0A1S2Y5A1_CICAR2.004e-4492.21Prohibitin OS=Cicer arietinum OX=3827 GN=LOC101492... [more]
tr|G7L8K5|G7L8K5_MEDTR2.147e-4493.51Prohibitin OS=Medicago truncatula OX=3880 GN=11426... [more]
tr|A0A2Z6M2X4|A0A2Z6M2X4_TRISU2.499e-4492.21Prohibitin OS=Trifolium subterraneum OX=3900 GN=TS... [more]
tr|A0A6P5NLQ3|A0A6P5NLQ3_ARADU6.455e-4490.91Prohibitin OS=Arachis duranensis OX=130453 GN=LOC1... [more]
tr|A0A2Z6NJ89|A0A2Z6NJ89_TRISU9.223e-4489.61Prohibitin OS=Trifolium subterraneum OX=3900 GN=TS... [more]
back to top
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|O04331|PHB3_ARATH9.423e-3975.32Prohibitin-3, mitochondrial OS=Arabidopsis thalian... [more]
sp|Q9LK25|PHB4_ARATH9.269e-3772.73Prohibitin-4, mitochondrial OS=Arabidopsis thalian... [more]
sp|P40961|PHB1_YEAST4.807e-2858.44Prohibitin-1 OS=Saccharomyces cerevisiae (strain A... [more]
sp|P84173|PHB_CHICK9.610e-2862.34Prohibitin OS=Gallus gallus OX=9031 GN=PHB PE=1 SV... [more]
sp|Q9BKU4|PHB1_CAEEL4.921e-2759.74Mitochondrial prohibitin complex protein 1 OS=Caen... [more]
sp|Q9P7H3|PHB1_SCHPO1.269e-2658.67Prohibitin-1 OS=Schizosaccharomyces pombe (strain ... [more]
sp|P35232|PHB_HUMAN3.699e-2659.74Prohibitin OS=Homo sapiens OX=9606 GN=PHB PE=1 SV=... [more]
sp|Q3T165|PHB_BOVIN3.699e-2659.74Prohibitin OS=Bos taurus OX=9913 GN=PHB PE=2 SV=1[more]
sp|P67779|PHB_RAT3.818e-2659.74Prohibitin OS=Rattus norvegicus OX=10116 GN=Phb PE... [more]
sp|P67778|PHB_MOUSE3.818e-2659.74Prohibitin OS=Mus musculus OX=10090 GN=Phb PE=1 SV... [more]
back to top
BLAST of Vfaba.Hedin2.R1.2g042320.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT5G40770.19.640e-4075.32| prohibitin 3 | Chr5:16315589-16316621 REVERSE LE... [more]
AT3G27280.29.483e-3872.73| prohibitin 4 | Chr3:10076904-10078051 FORWARD LE... [more]
AT3G27280.19.483e-3872.73| prohibitin 4 | Chr3:10076904-10078051 FORWARD LE... [more]
AT5G14300.12.447e-2568.75| prohibitin 5 | Chr5:4613102-4614023 FORWARD LENG... [more]
AT4G28510.17.378e-2150.67| prohibitin 1 | Chr4:14084970-14086372 REVERSE LE... [more]
AT1G03860.37.870e-2048.00| prohibitin 2 | Chr1:979611-981157 REVERSE LENGTH... [more]
AT1G03860.17.870e-2048.00| prohibitin 2 | Chr1:979611-981157 REVERSE LENGTH... [more]
AT2G20530.21.038e-1948.00| prohibitin 6 | Chr2:8842300-8843787 FORWARD LENG... [more]
AT2G20530.11.038e-1948.00| prohibitin 6 | Chr2:8842300-8843787 FORWARD LENG... [more]
AT5G44140.11.447e-1646.75| prohibitin 7 | Chr5:17762491-17763629 FORWARD LE... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000163ProhibitinPRINTSPR00679PROHIBITINcoord: 168..187
score: 58.46
coord: 191..202
score: 30.77
coord: 150..166
score: 54.75
IPR000163ProhibitinPANTHERPTHR23222PROHIBITINcoord: 122..198
IPR001107Band 7 domainPFAMPF01145Band_7coord: 126..195
e-value: 7.6E-6
score: 26.0

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.2g042320.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g042320.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g042320.1; organism=Vicia faba; type=mRNA; length=609bp
ATGACTTCTTCTCCTCTTCTCTTTCGCGACTCAGCGGCGGCGCCCAACTC
GATCTTCCTATTTGTTTTCCATGATGATTTCGCCACCAGCGATCAACACA
GCATAACTGTGTCATCTCCGTTGTCGCTTCTTCTCCGAACTTCGTTTCGG
TTCCAAACCCTAGCATACGATAAACGGAATCGCAACACCAACCGAATAGG
GGAACAAAGGCCGTTGAAAATGGAAATTGAAGATTGGATCCGCGATGAAG
GTGATGATTGGAGAATCAGTGAAGGTTGGATGATGGTGATTAGGATCCAG
AGTTTATTGAGTGAGCTACAGAGAGGGAAGGTTGTGGATGATGATGATGG
TGCCAAGTTCTGTTTCCGCGGCATCCTCGACGAATCAATCGGCGAGGGAA
CCCATTTCCTCATCCCATGGGTTCAAAAACCCTACATCTTCGATATCAAA
ACCCGCCCCCATACTTTCTCATCAATATCTGGCACCAAAGATCTTCAAAT
GGTTAACCTAACTCTCCGAGTCCTCTCTCGTCCCGACACCGCGAAACTCC
CTGTCATCGTTCAAAACCTCGGTCTCGAATACGACGAGAGAGTGACGCTG
CTATATTGA
back to top

protein sequence of Vfaba.Hedin2.R1.2g042320.1_vfh_v1

>Vfaba.Hedin2.R1.2g042320.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g042320.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g042320.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=202bp
MTSSPLLFRDSAAAPNSIFLFVFHDDFATSDQHSITVSSPLSLLLRTSFR
FQTLAYDKRNRNTNRIGEQRPLKMEIEDWIRDEGDDWRISEGWMMVIRIQ
SLLSELQRGKVVDDDDGAKFCFRGILDESIGEGTHFLIPWVQKPYIFDIK
TRPHTFSSISGTKDLQMVNLTLRVLSRPDTAKLPVIVQNLGLEYDERVTL
LY
back to top

mRNA from alignment at chr2:245012833..245017313+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.2g042320.1_vfh_v1 ID=Vfaba.Hedin2.R1.2g042320.1_vfh_v1; Name=Vfaba.Hedin2.R1.2g042320.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr2:245012833..245017313+ (Vicia faba
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000163Prohibitin
IPR001107Band_7
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane