Vfaba.Hedin2.R1.3g084760.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A396JWZ3|A0A396JWZ3_MEDTR (Putative The fantastic four family protein OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr1g0191391 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 2.166e-61 Identity = 139/280 (49.64%), Postives = 158/280 (56.43%), Query Frame = 0 Query: 1 MIFSLYFQIILSLSFSFLFHLFNFKKHFHSFFITTNNNHKCSNPNPNPNPNRPVSSKSKLLISLPPSPTIHDM----VCTESIGFESTQLVDDYDYSIIDENIEGDEDDHDEYCSKNTTVVEEEEGVNGNNMFPPPLSSLGGNGLPRYILIPVRMNGRLQLNKMSVKRPKTVYADREDGRLRLFLVTDECHMEE---------------------------EEEEMVEENRYDYEEDDRVREWN---DNEKYRKRYHCHQQLVNNHIHGSHGNLLMYGVG 246 MIFSLYFQIILSLS SFL H FNFKKH HSF K +N N P SSKSK ISLPP TIH+M CTESI +E DEYC +NT VE GVN NN FPPPLSSL N P YIL+PVR +GRLQLNKM V RP +YA+R+DGRLRL+LV DEC+ + E EE + EEDDR REW+ +NE+YR+R CHQQLV N+IHGSH NL+MYGV Sbjct: 1 MIFSLYFQIILSLSLSFLLHAFNFKKHLHSFLTLLTTTDKNNNKLDLKCTNHPFSSKSKPKISLPPPRTIHEMKQLMTCTESI----------------------NEYQGDEYCLRNTRAVEG--GVNSNNTFPPPLSSLDNNCQPSYILLPVRKDGRLQLNKMRVDRPDILYANRQDGRLRLYLVPDECNANDVEQEEYYEDDEEEEEYLEEEEITIVESESEEEIMGEESRCEEDDRAREWSNNKNNERYRRR--CHQQLV-NYIHGSHNNLVMYGVA 253
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XYP8|A0A1S2XYP8_CICAR (protein FANTASTIC FOUR 1 OS=Cicer arietinum OX=3827 GN=LOC101511536 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 5.965e-47 Identity = 113/284 (39.79%), Postives = 153/284 (53.87%), Query Frame = 0 Query: 1 MIFSLYFQIILSLSFSFLFHLFNFKKHFHSFFITTNNNHKCSNPNPNPNPNRPVSSKSKLLISLPPSPTIHDMVCTESIGFESTQLVDDYDYSIIDENIEGDEDDHDEYCSKNTTVVEEEEGVNGNNMFPPPLSSLGGNGLPRYILIPVRMNGRLQLNKMSVKRPKTVYADREDGRLRLFLVTDECHMEEEEEEM----------------------------------VEENRYDYEEDDRVREWN--DNEKYRKRYHCHQQLVNNHIHGSHGNLLMYGVGIV 248 MIFSL FQIILS+S SFL H FN KKH H FF ++ N N N + + K + + PP T+H+M DDH+EYC + + EG +N FPPPLSSL GNG ++L+P R +GRLQL K+ ++RP+ + A+R++GRLRL++V D+ ++E++ + + VE++RY+YEEDDRVRE N +NE+YR+R H H QLV NHIHGSH NLLMYGV I Sbjct: 1 MIFSLCFQIILSISLSFLLHAFNLKKHLHFFFTLLTPSNATDNNNHNLHHSISSIKKPVIPLPPPPMTTLHEMQV----------------------------DDHNEYCWR----TKPAEGDVYSNSFPPPLSSLDGNGQRSFVLLPTRKDGRLQLYKVKLRRPEIMVANRQNGRLRLYIVRDQ-YIEDDLDYLQEECEEEEFVKEEESTVVESESESESESESEEEMVEDSRYEYEEDDRVRECNNQNNERYRRRCH-HHQLV-NHIHGSHNNLLMYGVSIA 249
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MQX8|A0A2Z6MQX8_TRISU (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_32180 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 8.538e-41 Identity = 83/160 (51.88%), Postives = 101/160 (63.12%), Query Frame = 0 Query: 112 KNTTVVEEEEGVNGNNMFPPPLSSLGGNGLPRYILIPVRMNGRLQLNKMSVKRPKTVYADREDGRLRLFLVTDECHMEE-----------------------EEEEMVEENRYDYEEDDRVREWNDNEKYRKRYHCHQQLVNNHIHGSHGNLLMYGVGIV 248 + ++ + GVN NN FPPPLSSL GNG P +IL+PVR NG LQLNK+ V+RPKT+YA R+DGRLRL+LV D+CH+++ E E YEEDDRVREWN + YR++ CHQQLV NHIHGSH NLLM VGI Sbjct: 26 RRKRMMTMKGGVNSNNKFPPPLSSLDGNGQPSFILLPVRRNGMLQLNKVEVRRPKTLYASRQDGRLRLYLVPDQCHIDDLEQEVSEEEEDEEQEEESNIVESESSEEEMVEESRYEEDDRVREWNTH--YRRK--CHQQLV-NHIHGSHNNLLMCAVGIA 180
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. UniProtKB/TrEMBL
Match: tr|G7I7G8|G7I7G8_MEDTR (DUF3049 family protein OS=Medicago truncatula OX=3880 GN=11410744 PE=3 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 1.253e-40 Identity = 88/170 (51.76%), Postives = 104/170 (61.18%), Query Frame = 0 Query: 107 DEYCSKNTTVVEEEEGVNGNNMFPPPLSSLGGNGLPRYILIPVRMNGRLQLNKMSVKRPKTVYADREDGRLRLFLVTDECHMEE---------------------------EEEEMVEENRYDYEEDDRVREWN---DNEKYRKRYHCHQQLVNNHIHGSHGNLLMYGVG 246 DEYC +NT VE GVN NN FPPPLSSL N P YIL+PVR +GRLQLNKM V RP +YA+R+DGRLRL+LV DEC+ + E EE + EEDDR REW+ +NE+YR+R CHQQLV N+IHGSH NL+MYGV Sbjct: 17 DEYCLRNTRAVEG--GVNSNNTFPPPLSSLDNNCQPSYILLPVRKDGRLQLNKMRVDRPDILYANRQDGRLRLYLVPDECNANDVEQEEYYEDDEEEEEYLEEEEITIVESESEEEIMGEESRCEEDDRAREWSNNKNNERYRRR--CHQQLV-NYIHGSHNNLVMYGVA 181
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445IN41|A0A445IN41_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_027195 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 7.863e-34 Identity = 95/233 (40.77%), Postives = 131/233 (56.22%), Query Frame = 0 Query: 1 MIFSLYFQIILSLSFSFLFHLFNFKKHFHSFFI----TTNNNHKCSNPNPNPNPNRPVSSKSKLLISLPPSPT----IHDM--------VCTESIG-FESTQLVDDYDYSIIDENIEGDEDDHDEYCSKNTTVVEEEEGVNGNNMFPPPLSSLGGNGLPRYILIPVRMNGRLQLNKMSVKRPKTVYADREDGRLRLFLVTDEC-----HMEEEEEEMVEENRYDYEEDDRVRE 211 M+ LY I+LSLS SFL H+F KKH H F + T N+ + +N N +PN P + + PP P I D+ CT+S+ F+S + + ID+N D+++ ++ C + T V E G +FPPPLSSL GNG P +IL+PVR NGRLQL K+ +KRPK +YA R+DGRLRL LV D+C EE E+E+V++ EED R+ E Sbjct: 2 MVLFLYVPILLSLSISFLIHVF--KKHIHLFLLDCVTTFNSTNTMTNHNYKLHPNSPPTIMHMHVPDSPPPPNQIGFIEDVGEGIEGLVTCTKSLASFQSIDVSGE-----IDDNDNNDDEEDEDNCWRKTRVAE------GRGIFPPPLSSLNGNGQPSFILVPVRKNGRLQLTKVRIKRPKILYATRQDGRLRLLLVPDQCVEDNAQEEEHEQELVDDTE---EEDMRLVE 218
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. UniProtKB/TrEMBL
Match: tr|K7LJN2|K7LJN2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100780219 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.124e-33 Identity = 95/233 (40.77%), Postives = 130/233 (55.79%), Query Frame = 0 Query: 1 MIFSLYFQIILSLSFSFLFHLFNFKKHFHSFFI----TTNNNHKCSNPNPNPNPNRPVSSKSKLLISLPPSPT----IHDM--------VCTESIG-FESTQLVDDYDYSIIDENIEGDEDDHDEYCSKNTTVVEEEEGVNGNNMFPPPLSSLGGNGLPRYILIPVRMNGRLQLNKMSVKRPKTVYADREDGRLRLFLVTDEC-----HMEEEEEEMVEENRYDYEEDDRVRE 211 M+ LY I+LSLS SFL H+F KKH H F + T N+ + +N N +PN P + + PP P I D+ CT+S+ F+S + + ID+N D+++ ++ C + T V E G FPPPLSSL GNG P +IL+PVR NGRLQL K+ +KRPK +YA R+DGRLRL LV D+C EE E+E+V++ EED R+ E Sbjct: 2 MVLFLYVPILLSLSISFLIHVF--KKHIHLFLLDCVTTFNSTNTMTNHNYKLHPNSPPTIMHMHVPDSPPPPNQIGFIEDVGEGIEGLVTCTKSLASFQSIDVSGE-----IDDNDNNDDEEDEDNCWRKTRVAE------GRGNFPPPLSSLNGNGQPSFILVPVRKNGRLQLTKVRIKRPKILYATRQDGRLRLLLVPDQCVEDNAQEEEHEQELVDDTE---EEDMRLVE 218
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3JM16|A0A2K3JM16_TRIPR (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g048708 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 7.695e-31 Identity = 64/120 (53.33%), Postives = 81/120 (67.50%), Query Frame = 0 Query: 75 CTESIGFESTQLVDDYDYSIIDENIEGDEDDHDEYCSKNTTVVEEEEGVNGNNMFPPPLSSLGGNGLPRYILIPVRMNGRLQLNKMSVKRPKTVYADREDGRLRLFLVTDECHMEEEEEE 194 CTES+GFES IDEN ++ EYC ++ GVN +N FPPPLSSLGGNG P +IL+PVR NG LQLNK+ VKRP +YA REDGRLRL+LV D+C++++ E+E Sbjct: 7 CTESVGFES-----------IDEN----DEYEGEYCPT------KKRGVNSSNTFPPPLSSLGGNGQPSFILLPVRKNGMLQLNKVEVKRPTPLYASREDGRLRLYLVPDQCYIDDMEQE 105
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4QDQ8|A0A6A4QDQ8_LUPAL (Putative The fantastic four family protein OS=Lupinus albus OX=3870 GN=Lalb_Chr06g0167831 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.002e-28 Identity = 107/294 (36.39%), Postives = 137/294 (46.60%), Query Frame = 0 Query: 2 IFSLYFQIILSLSFSFLFHLFNFKKHFHSFF-----ITTNNNHKCSNPNPNPNPNRPVSSKSKLLISLPPSPTIHD---MVCTESIGFESTQLVDDYDYSIIDENIEGDEDDHD---------------------EYCS--KNTTVVEEEEGVNGNNMFPPPLSSLGGNGLPRYILIPVRMNGRLQLNKMSVKRPKTVYADREDGRLRLFLV------------TDECHMEEEEEEMV---EENRYDYEEDDRVREWN-DNEKYRKRYHCHQQLVNNHIHGSHGNLLMYGVGIV 248 IFSLYF +ILS SFL KKH HSF I T N + +RP+S+ S T H M TES+GF+S IDE + D DH+ +C + T V E + N +PP LSSL NG P + L PVR NGRL L K+ +K + +YA RE+GRLRL+LV E ++EEE MV E + E+DRV EWN NE +R+ CH Q++N HGSH NL MYG+G+ Sbjct: 3 IFSLYFPLILSF-LSFLDS--TIKKHIHSFIGFATTINTTRNIATDEHKLHLKSHRPISA----------SATTHTHEFMSSTESLGFDS-----------IDERLVNDHIDHEIHHDNDNDNGNDNDNDNDDDDGWCYDLRRTRVAEGRQ-----NCYPPLLSSLNRNGRPSFFLRPVRKNGRLILTKVRMKSHEMIYASRENGRLRLYLVPDDDDDEEQEELVGEIAEQKEEEMMVDSDLEEDEEDIEEDRVGEWNYGNEGFRR---CH-QVMNTCYHGSHQNLHMYGLGVA 263
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7G202|A0A1J7G202_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_19332 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.613e-26 Identity = 82/197 (41.62%), Postives = 109/197 (55.33%), Query Frame = 0 Query: 73 MVCTESIGFEST--QLVDDYDYSIIDENIEGDEDDHDEYC--SKNTTVVEEEEGVNGNNMFPPPLSSLGGNGLPRYILIPVRMNGRLQLNKMSVKRPKTVYADREDGRLRLFLV------------TDECHMEEEEEEMVEEN-RYDYEEDDRVREWN----DNEKYRKRYHCHQQLVNNHIHGSHGNLLMYGVGIV 248 M TES+GF+S + V+D+ +D I D D+ D YC S+ T V E + FPPPLSS N P + L PVR NGRL L K+ +KR + +Y+ RE+GRLRL+LV E + EEE MV+ + + E+DRV EWN NE +R+ CH Q++N HGSH NL MYG+GI Sbjct: 5 MSSTESLGFDSIDERQVNDH----VDHEIHHDNDNDDGYCYDSRRTRVAEGRR-----DCFPPPLSSWNRNCRPSFFLRPVRKNGRLILTKVRMKRHEMIYSSRENGRLRLYLVPDDDDDDEEEELVGEIAEQTEEEMMVDSDLEEEEIEEDRVGEWNYGMGSNEGFRR---CH-QVMNPCYHGSHQNLRMYGLGIA 188
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. UniProtKB/TrEMBL
Match: tr|C6TA54|C6TA54_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100777087 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.877e-23 Identity = 83/191 (43.46%), Postives = 112/191 (58.64%), Query Frame = 0 Query: 1 MIFSLYFQIILSLSFSFLFHLFNFKKHFHSFF---ITTNN--NHKCSNPNPNPNPNRPVSSKSKLLISLPPSPTIHDMVCTESIGFESTQLVDDYDYSIIDENIEGDEDDHDEYCSKNTTVVEEEEGVNGNNMFPPPLSSLGGNGLPRYILIPVRMNGRLQLNKMSVKRPKTVYADREDGRLRLFLVTDEC 186 M+F LY I+LSLSFSFL H+F KKH H +TT N N N PN + S+ + M CT+++GF+S + D ID+N ++D+ ++ C + T V E G FPPPLSSL GNG P +IL+PVR NGRLQL+K+ +K+PK +YA R+DGRL+LFLV D+C Sbjct: 1 MVFFLYVPILLSLSFSFLLHVF--KKHIHISLLDLVTTFNSTNIMIDNYKLYPNQIGFIEDVSEGIEGF--------MTCTKNLGFQSIDISDK-----IDDNDNNNDDEDEDNCWRKTRVTE------GKGNFPPPLSSLNGNGQPSFILVPVRKNGRLQLSKVRIKKPKILYATRQDGRLKLFLVPDQC 170
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. Araport11
Match: AT1G54740.1 (| FANTASTIC four-like protein (DUF3049) | Chr1:20430839-20431738 FORWARD LENGTH=299 | 201606) HSP 1 Score: 69.707 bits (169), Expect = 9.406e-14 Identity = 45/120 (37.50%), Postives = 60/120 (50.00%), Query Frame = 0 Query: 73 MVCTESIGFESTQLVDDYDYSIIDENIEGDEDDHDEY----------CSKNTTVVEEEEGVNGNNMFPPPLSSLGGNGLPRYILIPVRMNGRLQLNKMSVKRPKTVYADREDGRLRLFLV 182 M+CTE +GFES YD + D +E H E +K VV+ ++ FPPPLSSL G + L PVR +GRL+L ++ V RP+ + R DGRLRL V Sbjct: 37 MLCTEYLGFES------YDMRMSDNEVENKMTCHAEVETERVEAKRRKTKENVVVQAQK-----KQFPPPLSSLNSRGQRYFYLRPVRKDGRLELTQVMVDRPEIFHVSRVDGRLRLHFV 145 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Hedin2.R1.3g084760.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 1
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.3g084760.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g084760.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g084760.1; organism=Vicia faba; type=mRNA; length=747bpback to top protein sequence of Vfaba.Hedin2.R1.3g084760.1_vfh_v1 >Vfaba.Hedin2.R1.3g084760.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g084760.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g084760.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=248bpback to top mRNA from alignment at chr3:520877397..520878143- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.3g084760.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g084760.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g084760.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:520877397..520878143- (Vicia fababack to top |