Vfaba.Hedin2.R1.3g165480.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y597|A0A1S2Y597_CICAR (uncharacterized protein LOC101496104 OS=Cicer arietinum OX=3827 GN=LOC101496104 PE=4 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.226e-27 Identity = 101/221 (45.70%), Postives = 123/221 (55.66%), Query Frame = 0 Query: 1 MQKFLQRPTCSLPIPILSSSSSHNPVFL---HLPTATMSTTTTTTKTPNS-NSTLLLKHSSSCYSNPSYLRTSFSPTLTLTPTKT-LLNRSL--------------YSNSSLHHSSSHPTTGVHDSSSSSSSSSSTTAFRLNRR--------------------------NFRKLLNKGIQGVAQLKQLYKDKFFGKSSDHMVEYLQSSVGIIHKNHAESI 176 MQK + R TCSLPIPIL+ S++ P+ H T S+ + + S +TL SS YS Y+R F PTLTLT T ++N++L S+SS H + G +S+SSSSSST FRLNRR NF+KL+ KGI+GVAQLKQLYKDKFFGKSSD MVEYL+SSVGIIHKNHAESI Sbjct: 1 MQKVIHRSTCSLPIPILTLSATCIPLLTKPSHFTTMASSSPSNSAALSFSLKNTLYSSSSSFRYSKVCYVRRCFCPTLTLTRHTTTIINKTLPCLLNNNSSNSLQSSSSSSSHDTEDEQQQGTTGDNSTSSSSSSTATFRLNRRQKASSSSSPISSSNPDLLAIPGVGPRNFKKLVRKGIEGVAQLKQLYKDKFFGKSSDQMVEYLRSSVGIIHKNHAESI 221
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371IHE9|A0A371IHE9_MUCPR (Deoxycytidine kinase (Fragment) OS=Mucuna pruriens OX=157652 GN=DCK PE=4 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.353e-24 Identity = 93/218 (42.66%), Postives = 113/218 (51.83%), Query Frame = 0 Query: 1 MQKFLQRPTCSLPIPILSSSSSHNPVFLHLP-----TATMSTTTTTTKTPNSNSTLLLKHS--------SSCYSNPSYLRTSFSPTLTLTPTKTLL--NRSLYSNSSLHHSSSHPTTGVHDSSSSSSSSSSTTAF--RLNRR-------------------------NFRKLLNKGIQGVAQLKQLYKDKFFGKSSDHMVEYLQSSVGIIHKNHAESI 176 MQK L RP+ SLP ++ +S FL LP A MS + + ++ + +L K + SS Y S + LT T +K+LL NRSLYS S +S T D+S ++ + F RLNRR NFRKL+ KGI GVAQLKQLYKDKFFGKSSD MVEYLQSSVGIIHKNHAESI Sbjct: 1 MQKLL-RPSPSLPFLSVTVASP----FLSLPKASNLVANMSASASAAAAGSTLAPILTKKAPLGLKPFLSSRYLALSSNASCACKCLTHTWSKSLLSRNRSLYSASD----ASFLTDPEDDTSVETNHAKEKKPFNFRLNRRHKPSTSSSPAPSNPDLLAIPGVGPRNFRKLVQKGIAGVAQLKQLYKDKFFGKSSDKMVEYLQSSVGIIHKNHAESI 209
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VYI4|A0A1S3VYI4_VIGRR (uncharacterized protein LOC106779641 OS=Vigna radiata var. radiata OX=3916 GN=LOC106779641 PE=4 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 3.473e-24 Identity = 89/203 (43.84%), Postives = 101/203 (49.75%), Query Frame = 0 Query: 14 IPILSSSSSHNPVFLHLPTATMSTTTTTTKTPNSNSTL--LLKHSSSCYSNPSY-------LRTSFSPTLTLTPTKTLLNRSLYSNSSLHHSSSHPTTGVH---DSSSSSSSSSSTTAF--RLNRR--------------------------NFRKLLNKGIQGVAQLKQLYKDKFFGKSSDHMVEYLQSSVGIIHKNHAESI 176 IP+LS N FL + A T + + L+ H SS Y PS+ R S +PT T T LLN S N SL S+SH + H D S S+ + F RLNRR NFRKL+ KGI GVAQLKQLYKDKFFGKSSD MVEYLQSSVGIIHKNHAESI Sbjct: 20 IPVLSFPQVSN--FLPMSAALQPPTAPASSLSDKKKPFGALMPHLSSRY--PSFSSTTCCVCRLSLTPTPARTNTHLLLNHS--PNRSLF-SASHGSFFFHSPRDFSVESNQAKEKRPFSLRLNRRQKGPTTSSSPSPSNPDLLAIPGVGPRNFRKLVQKGIAGVAQLKQLYKDKFFGKSSDKMVEYLQSSVGIIHKNHAESI 215
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. UniProtKB/TrEMBL
Match: tr|G7IYD9|G7IYD9_MEDTR (Deoxyribonucleoside kinase OS=Medicago truncatula OX=3880 GN=11427944 PE=4 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.505e-24 Identity = 87/161 (54.04%), Postives = 97/161 (60.25%), Query Frame = 0 Query: 60 YSNPSYLRTSFSPTLTLTPTKT--------------LLNRSLYSN----SSLHHS---SSHPTTGVHDSSSSSSSSSSTTAFRLNRR-----------------------NFRKLLNKGIQGVAQLKQLYKDKFFGKSSDHMVEYLQSSVGIIHKNHAESI 176 YSN SY+RT F PTLTLT T LL S +SN SS H++ S PTT SSSSSSS+++T++FRLN R NFRKL+ KGIQGVAQLKQLYKDKF GKSSD MVEYLQSSVGIIHKNHAESI Sbjct: 82 YSNASYVRTCFCPTLTLTRHTTTTSTSNNTKNLPWLLLKHSQHSNATSQSSFHNNPEQQSTPTTEDDSSSSSSSSTNTTSSFRLNNRRHQKAESSSTPPDLLAIPGVGPRNFRKLVQKGIQGVAQLKQLYKDKFIGKSSDQMVEYLQSSVGIIHKNHAESI 242
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151RH25|A0A151RH25_CAJCA (Deoxycytidine kinase OS=Cajanus cajan OX=3821 GN=KK1_036775 PE=4 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.189e-23 Identity = 63/121 (52.07%), Postives = 70/121 (57.85%), Query Frame = 0 Query: 79 TKTLLNRSLYSNSSLHHSSSHPTTGVHDSSSSSSSSSSTTAFRLNRR-----------------------NFRKLLNKGIQGVAQLKQLYKDKFFGKSSDHMVEYLQSSVGIIHKNHAESI 176 T LLNRSL S+S T + +S+ + + FRLNRR NFRKL+ KGI GVAQLKQLYKDKFFGKSSD MVEYLQ SVGIIHKNHAESI Sbjct: 78 TTLLLNRSL-------RSASDATFLTPEDASADAKDKRSFNFRLNRRHKTSSSPAPSNPDLLAIPGVGPRNFRKLVQKGIAGVAQLKQLYKDKFFGKSSDKMVEYLQCSVGIIHKNHAESI 191
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6MTF4|A0A2Z6MTF4_TRISU (dNK domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_227650 PE=4 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.292e-23 Identity = 64/130 (49.23%), Postives = 75/130 (57.69%), Query Frame = 0 Query: 78 PTKTLLNRSLYSNSSLHHSSSHPTTGVHDSSSS---------SSSSSSTTAFRLNRR----------------------NFRKLLNKGIQGVAQLKQLYKDKFFGKSSDHMVEYLQSSVGIIHKNHAESI 176 P L + S ++N++ HH +H HD + SSS+S+ FRLNRR NFRKL+ GIQGVAQLKQLYKDKF GKSS+ MVEYLQSSVGIIHKNHAESI Sbjct: 101 PCLPLQHSSFHTNNTPHHPQNH-----HDDDKATTTTTQGEPDSSSTSSNTFRLNRRQKTPDSSSNPPDLLAIPGVGPRNFRKLVQNGIQGVAQLKQLYKDKFIGKSSNQMVEYLQSSVGIIHKNHAESI 225
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. UniProtKB/TrEMBL
Match: tr|I1KFZ4|I1KFZ4_SOYBN (dNK domain-containing protein OS=Glycine max OX=3847 GN=100789564 PE=4 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.488e-22 Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0 Query: 125 RNFRKLLNKGIQGVAQLKQLYKDKFFGKSSDHMVEYLQSSVGIIHKNHAESI 176 RNFRKL+ KGI GVAQLKQLYKDKFFGKSSD MVEYLQSSVGIIHKNHAESI Sbjct: 151 RNFRKLVQKGIAGVAQLKQLYKDKFFGKSSDKMVEYLQSSVGIIHKNHAESI 202
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0B2QJZ7|A0A0B2QJZ7_GLYSO (Deoxycytidine kinase OS=Glycine soja OX=3848 GN=D0Y65_016436 PE=4 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.488e-22 Identity = 48/52 (92.31%), Postives = 49/52 (94.23%), Query Frame = 0 Query: 125 RNFRKLLNKGIQGVAQLKQLYKDKFFGKSSDHMVEYLQSSVGIIHKNHAESI 176 RNFRKL+ KGI GVAQLKQLYKDKFFGKSSD MVEYLQSSVGIIHKNHAESI Sbjct: 151 RNFRKLVQKGIAGVAQLKQLYKDKFFGKSSDKMVEYLQSSVGIIHKNHAESI 202
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. UniProtKB/TrEMBL
Match: tr|V7BU96|V7BU96_PHAVU (dNK domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G000500g PE=4 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.571e-22 Identity = 72/142 (50.70%), Postives = 78/142 (54.93%), Query Frame = 0 Query: 67 RTSFSPTLTLTPTKTLLN----RSLYSNSSLHHSS--SHPTTGVHDSSSSSSSSSSTTAFRLNRR--------------------------NFRKLLNKGIQGVAQLKQLYKDKFFGKSSDHMVEYLQSSVGIIHKNHAESI 176 R S +PT T T T LLN RSL+S S H S SH GV S + + RLNRR N RKL+ KGI GVAQLKQLYKDKFFGKSSD MVEYLQSS+GIIHKNHAESI Sbjct: 81 RLSLNPTPTRTNTLLLLNHSPNRSLFSAS---HGSFISHSLHGV-SVESDHAKEKRPFSLRLNRRQKGPTPSSSPAPSNPDLLAIPGVGPRNLRKLVQKGIAGVAQLKQLYKDKFFGKSSDKMVEYLQSSIGIIHKNHAESI 218
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SJI6|A0A0S3SJI6_PHAAN (dNK domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G186300 PE=4 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.114e-22 Identity = 71/142 (50.00%), Postives = 79/142 (55.63%), Query Frame = 0 Query: 67 RTSFSPTLTLTPTKTLLN----RSLYSNSSLHHSSSHPTTGVHDSSSSSSSSSSTTAF--RLNRR--------------------------NFRKLLNKGIQGVAQLKQLYKDKFFGKSSDHMVEYLQSSVGIIHKNHAESI 176 R S +PT T T LLN RSL+S S H S + + D S S+ + F RLNRR NFRKL+ KGI GVAQLKQLYKDKFFGKS+D MVEYLQSSVGIIHKNHAESI Sbjct: 77 RLSLTPTPNRTNTHILLNHSPNRSLFSAS---HGSFF-SRSLRDFSVESNHAKEKRPFSLRLNRRQKGPATSSSPSPSNPDLLAIPGVGPRNFRKLVQKGIAGVAQLKQLYKDKFFGKSNDKMVEYLQSSVGIIHKNHAESI 214
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. Araport11
Match: AT1G72040.1 (| P-loop containing nucleoside triphosphate hydrolases superfamily protein | Chr1:27112159-27114248 REVERSE LENGTH=580 | 201606) HSP 1 Score: 77.0258 bits (188), Expect = 1.851e-16 Identity = 36/52 (69.23%), Postives = 45/52 (86.54%), Query Frame = 0 Query: 125 RNFRKLLNKGIQGVAQLKQLYKDKFFGKSSDHMVEYLQSSVGIIHKNHAESI 176 RN RKL++ GI VA+LK+LYKDKF+ K+S MV+YL+SSVGIIH+NHAESI Sbjct: 189 RNQRKLVDNGIGDVAELKKLYKDKFW-KASQKMVDYLRSSVGIIHRNHAESI 239 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of Vfaba.Hedin2.R1.3g165480.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.3g165480.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g165480.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g165480.1; organism=Vicia faba; type=mRNA; length=573bpback to top protein sequence of Vfaba.Hedin2.R1.3g165480.1_vfh_v1 >Vfaba.Hedin2.R1.3g165480.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g165480.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g165480.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=190bpback to top mRNA from alignment at chr3:1142358123..1142358877- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.3g165480.1_vfh_v1 ID=Vfaba.Hedin2.R1.3g165480.1_vfh_v1; Name=Vfaba.Hedin2.R1.3g165480.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr3:1142358123..1142358877- (Vicia fababack to top |