Vfaba.Hedin2.R1.4g050800.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/TrEMBL
Match: tr|G7LAU8|G7LAU8_MEDTR (Calcium-binding EF-hand protein OS=Medicago truncatula OX=3880 GN=11439861 PE=4 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 5.179e-76 Identity = 113/125 (90.40%), Postives = 118/125 (94.40%), Query Frame = 0
Query: 1 METNKNMKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQIRN 125
METNKNMKQTTPTT E EF+DLLP+MAEKLDVE FVSELC GF LLADQE GLITSESLRKNSAMLGMEGMSKEDAEAMV+QGDLDGDGKLNETEFCILMVRLSP MM+DAETWLEKAIEEQ+RN
Sbjct: 1 METNKNMKQTTPTTMEAEFEDLLPIMAEKLDVETFVSELCGGFNLLADQETGLITSESLRKNSAMLGMEGMSKEDAEAMVKQGDLDGDGKLNETEFCILMVRLSPGMMEDAETWLEKAIEEQLRN 125
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NSL8|A0A2Z6NSL8_TRISU (EF-hand domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_350530 PE=4 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.830e-75 Identity = 113/125 (90.40%), Postives = 118/125 (94.40%), Query Frame = 0
Query: 1 METNKNMKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQIRN 125
METNKNM +T+ TT E EF+DLLPVMAEKLDVE FVSELCNGF LLADQEIGLITSESLRKNSAMLGM+GMSKEDAEAMV+QGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQ RN
Sbjct: 1 METNKNMNKTSTTTIEAEFEDLLPVMAEKLDVETFVSELCNGFNLLADQEIGLITSESLRKNSAMLGMDGMSKEDAEAMVKQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQPRN 125
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3NTY0|A0A2K3NTY0_TRIPR (Calcium-binding protein kic-like OS=Trifolium pratense OX=57577 GN=L195_g002965 PE=4 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 1.096e-73 Identity = 113/126 (89.68%), Postives = 118/126 (93.65%), Query Frame = 0
Query: 1 METNKNMKQTTPTTT-EPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQIRN 125
METNKNM QT+ TT E EF+DLLPVMAEKLDVE FVSELCNGF LLADQEIGLITSESLRKNSAMLGM+GMSKEDAEAMV+QGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQ +N
Sbjct: 1 METNKNMNQTSTTTIIEAEFEDLLPVMAEKLDVETFVSELCNGFNLLADQEIGLITSESLRKNSAMLGMDGMSKEDAEAMVKQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQPKN 126
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A6A4QMW9|A0A6A4QMW9_LUPAL (Putative EF-hand domain pair protein OS=Lupinus albus OX=3870 GN=Lal_00048282 PE=4 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 8.910e-66 Identity = 102/124 (82.26%), Postives = 115/124 (92.74%), Query Frame = 0
Query: 1 METNKNMKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQIR 124
M +N+NM QTT T + EF+DLLPVMAEKLDVEAF+SELC GF+LLADQE GLITSESLRKNSA+LGM+GMSKED+EAMV+QGDLDGDGKLNETEFCILMVRLSP MM+DAE+WLEKAIEE+IR
Sbjct: 1 MGSNQNMNQTT--TMKSEFEDLLPVMAEKLDVEAFMSELCCGFKLLADQEKGLITSESLRKNSALLGMDGMSKEDSEAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIEEEIR 122
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/TrEMBL
Match: tr|K7MES4|K7MES4_SOYBN (EF-hand domain-containing protein OS=Glycine max OX=3847 GN=100802677 PE=4 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.161e-63 Identity = 97/124 (78.23%), Postives = 113/124 (91.13%), Query Frame = 0
Query: 1 METNKNMKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQIR 124
ME++ NM+Q+T E EF+DLLPVMAEKLDVE+FVSELC GF+LL+D E GLITSESLR NSA+LGMEGMSKEDA+AMV+QGDLDGDGKLNETEFCILMVRLSP MM+DAE+WLEKAI+E++R
Sbjct: 1 MESSHNMRQST---METEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRTNSALLGMEGMSKEDADAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIDEELR 121
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445GD73|A0A445GD73_GLYSO (Calcium-binding protein KIC isoform A OS=Glycine soja OX=3848 GN=D0Y65_042470 PE=4 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.161e-63 Identity = 97/124 (78.23%), Postives = 113/124 (91.13%), Query Frame = 0
Query: 1 METNKNMKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQIR 124
ME++ NM+Q+T E EF+DLLPVMAEKLDVE+FVSELC GF+LL+D E GLITSESLR NSA+LGMEGMSKEDA+AMV+QGDLDGDGKLNETEFCILMVRLSP MM+DAE+WLEKAI+E++R
Sbjct: 1 MESSHNMRQST---METEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRTNSALLGMEGMSKEDADAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIDEELR 121
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/TrEMBL
Match: tr|C6TM17|C6TM17_SOYBN (EF-hand domain-containing protein OS=Glycine max OX=3847 GN=100801586 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.217e-63 Identity = 97/123 (78.86%), Postives = 111/123 (90.24%), Query Frame = 0
Query: 1 METNKNMKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQI 123
ME+N +M+Q T E EF+DLLPVMAEKLDVE+FVSELC GF+LL+D E GLITSESLR NSA+LGMEGMSKEDAEAMV+QGDLDGDGKLNETEFCILMVRLSP MM+DAE+WLEKAI+E++
Sbjct: 1 MESNHSMRQNT---METEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRTNSALLGMEGMSKEDAEAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIDEEL 120
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445JSQ7|A0A445JSQ7_GLYSO (Calcium-binding protein KIC isoform A OS=Glycine soja OX=3848 GN=D0Y65_016970 PE=4 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.217e-63 Identity = 97/123 (78.86%), Postives = 111/123 (90.24%), Query Frame = 0
Query: 1 METNKNMKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQI 123
ME+N +M+Q T E EF+DLLPVMAEKLDVE+FVSELC GF+LL+D E GLITSESLR NSA+LGMEGMSKEDAEAMV+QGDLDGDGKLNETEFCILMVRLSP MM+DAE+WLEKAI+E++
Sbjct: 1 MESNHSMRQNT---METEFEDLLPVMAEKLDVESFVSELCGGFKLLSDPETGLITSESLRTNSALLGMEGMSKEDAEAMVRQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIDEEL 120
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1J7IQZ9|A0A1J7IQZ9_LUPAN (EF-hand domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_05493 PE=4 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.494e-62 Identity = 97/119 (81.51%), Postives = 109/119 (91.60%), Query Frame = 0
Query: 7 MKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQIRN 125
M QTT TT + EF+D LPVMAEKLDVE F+SELC GF+LLADQE GLITSESLR+NSA+LGM+GMSKEDAEAMV+QGDLDGDGKLNETEFCILMVRLSP MM+DAE+WLEKAIEE+I+
Sbjct: 1 MNQTT-TTMKSEFEDFLPVMAEKLDVEEFMSELCCGFKLLADQEKGLITSESLRRNSALLGMDGMSKEDAEAMVKQGDLDGDGKLNETEFCILMVRLSPGMMEDAESWLEKAIEEEIKK 118
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/TrEMBL
Match: tr|A0A371EUA0|A0A371EUA0_MUCPR (Calcium-binding protein KIC (Fragment) OS=Mucuna pruriens OX=157652 GN=KIC PE=4 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 1.400e-61 Identity = 94/121 (77.69%), Postives = 112/121 (92.56%), Query Frame = 0
Query: 4 NKNMKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQIR 124
++NMK+++ E EF+DLLPVMAEKLDVE+FV+ELC GF+LLADQE GLITSESLR NSA+LGMEGMSKEDAEAMV+QGDLDGDGKLN+TEFCILMVRLSP +M+DAE+WLEKAI+E++R
Sbjct: 5 HENMKESS---MEAEFEDLLPVMAEKLDVESFVAELCGGFKLLADQEKGLITSESLRTNSALLGMEGMSKEDAEAMVRQGDLDGDGKLNQTEFCILMVRLSPGIMEDAESWLEKAIDEELR 122
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZPX9|KIC_ARATH (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 4.089e-56 Identity = 85/125 (68.00%), Postives = 106/125 (84.80%), Query Frame = 0
Query: 3 TNKNMKQTTPTTT--EPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQIRN 125
T K+M T +TT E +++D+LPVMAEK+DVE FVSELC GF LLAD E LIT+ESLR+NS +LG+EGMSKEDA+ MV++GDLDGDG LN+TEFC+LMVRLSPEMM+DAETWLEKA+ +++ N
Sbjct: 4 TEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQELCN 128
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/Swiss-Prot
Match: sp|O81831|CARP1_ARATH (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.082e-34 Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 0
Query: 1 METNKNMKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSA-MLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQI 123
M + K+ + T +P F D LP MA L E + ELCNGF LL D+E G+IT ESLR+N+A +LG+ ++ ED M+++GD D DG LN+ EFC+LM RLSP++M+ + + + IEE+
Sbjct: 1 MASPKSPTRPTQQNPQPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9LSQ6|PBP1_ARATH (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 4.225e-32 Identity = 54/124 (43.55%), Postives = 79/124 (63.71%), Query Frame = 0
Query: 1 METNKNMKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKN-SAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQI 123
M + K+ + EP+FQD P MA KL E + E+C GF LL D++ G+IT ESLR+N S +LG+ ++ +D M+ +GD D DG LN+ EFC+LM RLSPE+M+ + + + IEE+
Sbjct: 1 MASPKSSTRPNQENQEPQFQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q2TBN3|CETN2_BOVIN (Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.480e-10 Identity = 31/86 (36.05%), Postives = 51/86 (59.30%), Query Frame = 0
Query: 19 FQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLS 104
F D L VM +K+ + E+ F+L D E G I+ ++L++ + LG E +S E+ + M+ + D DGDG++NE EF +M + S
Sbjct: 86 FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLSDEELQEMIDEADRDGDGEVNEQEFLRIMKKTS 170
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q12798|CETN1_HUMAN (Centrin-1 OS=Homo sapiens OX=9606 GN=CETN1 PE=1 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 2.987e-10 Identity = 31/86 (36.05%), Postives = 51/86 (59.30%), Query Frame = 0
Query: 19 FQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLS 104
F D L VM +K+ + E+ FRL D E G I+ ++L++ + LG E ++ E+ + M+ + D DGDG++NE EF +M + S
Sbjct: 86 FNDFLAVMTQKMSEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELG-ENLTDEELQEMIDEADRDGDGEVNEEEFLRIMKKTS 170
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/Swiss-Prot
Match: sp|Q9R1K9|CETN2_MOUSE (Centrin-2 OS=Mus musculus OX=10090 GN=Cetn2 PE=1 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 4.310e-10 Identity = 30/86 (34.88%), Postives = 51/86 (59.30%), Query Frame = 0
Query: 19 FQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLS 104
F D L VM +K+ + E+ F+L D E G I+ ++L++ + LG E ++ E+ + M+ + D DGDG++NE EF +M + S
Sbjct: 86 FSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG-ENLTDEELQEMIDEADRDGDGEVNEQEFLRIMKKTS 170
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. Araport11
Match: AT2G46600.1 (| Calcium-binding EF-hand family protein | Chr2:19136070-19136477 FORWARD LENGTH=135 | 201606) HSP 1 Score: 174.096 bits (440), Expect = 4.184e-57 Identity = 85/125 (68.00%), Postives = 106/125 (84.80%), Query Frame = 0
Query: 3 TNKNMKQTTPTTT--EPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQIRN 125
T K+M T +TT E +++D+LPVMAEK+DVE FVSELC GF LLAD E LIT+ESLR+NS +LG+EGMSKEDA+ MV++GDLDGDG LN+TEFC+LMVRLSPEMM+DAETWLEKA+ +++ N
Sbjct: 4 TEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQELCN 128
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. Araport11
Match: AT4G27280.1 (| Calcium-binding EF-hand family protein | Chr4:13663770-13664162 REVERSE LENGTH=130 | 201606) HSP 1 Score: 117.857 bits (294), Expect = 5.199e-35 Identity = 56/124 (45.16%), Postives = 81/124 (65.32%), Query Frame = 0
Query: 1 METNKNMKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKNSA-MLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQI 123
M + K+ + T +P F D LP MA L E + ELCNGF LL D+E G+IT ESLR+N+A +LG+ ++ ED M+++GD D DG LN+ EFC+LM RLSP++M+ + + + IEE+
Sbjct: 1 MASPKSPTRPTQQNPQPNFHDFLPTMAGNLGGEGLIGELCNGFELLMDREKGVITFESLRRNAAAVLGLGDLTDEDVRCMIKEGDFDCDGALNQMEFCVLMFRLSPDLMEASRCLVTEVIEEEF 124
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. Araport11
Match: AT5G54490.1 (| pinoid-binding protein 1 | Chr5:22121458-22121841 FORWARD LENGTH=127 | 201606) HSP 1 Score: 112.849 bits (281), Expect = 4.322e-33 Identity = 54/124 (43.55%), Postives = 79/124 (63.71%), Query Frame = 0
Query: 1 METNKNMKQTTPTTTEPEFQDLLPVMAEKLDVEAFVSELCNGFRLLADQEIGLITSESLRKN-SAMLGMEGMSKEDAEAMVQQGDLDGDGKLNETEFCILMVRLSPEMMQDAETWLEKAIEEQI 123
M + K+ + EP+FQD P MA KL E + E+C GF LL D++ G+IT ESLR+N S +LG+ ++ +D M+ +GD D DG LN+ EFC+LM RLSPE+M+ + + + IEE+
Sbjct: 1 MASPKSSTRPNQENQEPQFQDFFPTMAGKLGGEGLIEEICKGFELLMDKDKGVITFESLRRNASTVLGLGDLTDDDVRYMINEGDFDRDGALNQMEFCVLMFRLSPELMEASRCVVTEVIEEEF 124 The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot) Total hits: 6
BLAST of Vfaba.Hedin2.R1.4g050800.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11) Total hits: 3
InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vfaba.Hedin2.R1.4g050800.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g050800.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g050800.1; organism=Vicia faba; type=mRNA; length=378bpback to top protein sequence of Vfaba.Hedin2.R1.4g050800.1_vfh_v1 >Vfaba.Hedin2.R1.4g050800.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g050800.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g050800.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=125bpback to top mRNA from alignment at chr4:296049738..296050115+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Vfaba.Hedin2.R1.4g050800.1_vfh_v1 ID=Vfaba.Hedin2.R1.4g050800.1_vfh_v1; Name=Vfaba.Hedin2.R1.4g050800.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr4:296049738..296050115+ (Vicia fababack to top |