Vfaba.Hedin2.R1.5g183480.1

Transcript Overview
NameVfaba.Hedin2.R1.5g183480.1
Unique NameVfaba.Hedin2.R1.5g183480.1_vfh_v1
TypemRNA
OrganismVicia faba (Faba bean)
Sequence length660
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
chr5chromosomechr5:1268782986..1268785630 +Vicia faba inbred line Hedin/2 genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vfhzwsR464Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
asvfhL238Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvfhL316Vigna angularis Jingnong 6 genome v1.1Vigna angularis
cavfhL223Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavfhL349Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvfhL0661Cajanus cajan Asha genome v1.0Cajanus cajan
ccvfhL0794Cajanus cajan Asha genome v1.0Cajanus cajan
crvfhL280Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvfhL435Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvfhL582Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvfhL668Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vfhvfhL183Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvfhL264Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvfhL361Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuR592Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvuR594Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caivfhL263Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivfhL304Cicer arietinum ICC 4958 genome v2Cicer arietinum
anvfhL0443Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0638Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0699Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0854Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL0857Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvfhL1170Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
vfhvrvR559Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvrvR608Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvuaR538Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvuaR550Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vfhvssR616Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvssR640Vicia sativa cv. Studenica genome v1.0Vicia sativa
canvfhL192Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvfhL301Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvfhL168Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvfhL421Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvfhL191Cicer arietinum
carvfhL295Cicer arietinum
ccavfhL264Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavfhL362Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vfhvumR646Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvumR709Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvvaR563Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vfhvvaR596Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vasvfhL539Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvfhL768Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvstR663Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstR692Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvfvfhL552Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvfhL644Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vfhvunR548Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vfhvunR551Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_01209Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_022787116.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_011036Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_07663.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun06g108700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
evm.model.Chr06.1196Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigan.05G143400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cc_v2.0_08393.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cr_07499.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
rna-XM_004494609.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigst.05G114300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va09G047040.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
PvulFLAVERTChr06.1536Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
LR48_mrnaVigan09g158300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_21532Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun06g108700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat03G0041500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
XM_058882638.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
jg30921.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_07611.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Phvul.006G097900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_05G01160.1Vigna umbellata FF25 genome v1.0Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vfaba.Tiffany.R1.5g144040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.5g183480Vfaba.Hedin2.R1.5g183480_vfh_v1Vicia fabagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.5g183480.1_vfh_v1-exonVfaba.Hedin2.R1.5g183480.1_vfh_v1-exon-chr5_vfh_v1:1268782986..1268783199Vicia fabaexon
Vfaba.Hedin2.R1.5g183480.1_vfh_v1-exonVfaba.Hedin2.R1.5g183480.1_vfh_v1-exon-chr5_vfh_v1:1268783274..1268783422Vicia fabaexon
Vfaba.Hedin2.R1.5g183480.1_vfh_v1-exonVfaba.Hedin2.R1.5g183480.1_vfh_v1-exon-chr5_vfh_v1:1268783543..1268783704Vicia fabaexon
Vfaba.Hedin2.R1.5g183480.1_vfh_v1-exonVfaba.Hedin2.R1.5g183480.1_vfh_v1-exon-chr5_vfh_v1:1268784773..1268784888Vicia fabaexon
Vfaba.Hedin2.R1.5g183480.1_vfh_v1-exonVfaba.Hedin2.R1.5g183480.1_vfh_v1-exon-chr5_vfh_v1:1268785612..1268785630Vicia fabaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.5g183480.1_vfh_v1-cdsVfaba.Hedin2.R1.5g183480.1_vfh_v1-cds-chr5_vfh_v1:1268782986..1268783199Vicia fabaCDS
Vfaba.Hedin2.R1.5g183480.1_vfh_v1-cdsVfaba.Hedin2.R1.5g183480.1_vfh_v1-cds-chr5_vfh_v1:1268783274..1268783422Vicia fabaCDS
Vfaba.Hedin2.R1.5g183480.1_vfh_v1-cdsVfaba.Hedin2.R1.5g183480.1_vfh_v1-cds-chr5_vfh_v1:1268783543..1268783704Vicia fabaCDS
Vfaba.Hedin2.R1.5g183480.1_vfh_v1-cdsVfaba.Hedin2.R1.5g183480.1_vfh_v1-cds-chr5_vfh_v1:1268784773..1268784888Vicia fabaCDS
Vfaba.Hedin2.R1.5g183480.1_vfh_v1-cdsVfaba.Hedin2.R1.5g183480.1_vfh_v1-cds-chr5_vfh_v1:1268785612..1268785630Vicia fabaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vfaba.Hedin2.R1.5g183480.1_vfh_v1Vfaba.Hedin2.R1.5g183480.1_vfh_v1Vicia fabapolypeptide
Vfaba.Hedin2.R1.5g183480.1_vfh_v1Vfaba.Hedin2.R1.5g183480.1_vfh_v1-proteinVicia fabapolypeptide


Homology
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|G7L0S2|G7L0S2_MEDTR (Putative NTF2-like domain-containing protein OS=Medicago truncatula OX=3880 GN=11433325 PE=4 SV=2)

HSP 1 Score: 350.903 bits (899), Expect = 1.034e-120
Identity = 170/219 (77.63%), Postives = 192/219 (87.67%), Query Frame = 0
Query:    1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQKTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
            MAA RIA RIIN HH+   N   N+ YRSISTT+HLQ+SW++K+KNVFT QK+E    DASQF     TLL+FADEMKKARK+GAFKEY+VGRSS+VTF+TA EKYE IIRYLAAFDYTGENL T+ K EAAKHCNCTIA+VENALAKFTWAKEA KKIQ+LN+EGKPMPK++AELQK+VGTNP+D+AKSNLAKSGQVSRNA CPCGSKKRYKRCCGKD
Sbjct:    1 MAALRIANRIINYHHNLLYN---NYQYRSISTTVHLQSSWMDKVKNVFTGQKSEGAPPDASQF-----TLLNFADEMKKARKVGAFKEYIVGRSSEVTFSTAIEKYEVIIRYLAAFDYTGENLTTNQKHEAAKHCNCTIAEVENALAKFTWAKEAHKKIQKLNQEGKPMPKNMAELQKMVGTNPMDIAKSNLAKSGQVSRNALCPCGSKKRYKRCCGKD 211          
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2XUJ1|A0A1S2XUJ1_CICAR (uncharacterized protein LOC101492178 OS=Cicer arietinum OX=3827 GN=LOC101492178 PE=4 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 7.752e-117
Identity = 170/221 (76.92%), Postives = 187/221 (84.62%), Query Frame = 0
Query:    1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQKTE--QPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
            MA  RIA     R+ H  LNK  ++ YRSI TT+ LQ+SW++KIKNVFT Q TE  Q Q    QF S SFTLL+FADEM KARKIGAFKEYMVGRSS+VTFATAF+KYEAIIR+L A D TGENLKTS KQEAAKHCNCTIADVENALAKFTWAKEA KKI +LN+EGKPMPKS+AELQKLVGTNP+DLA+SNLA+SGQVSRNA CPCGSKKRYKRCCGKD
Sbjct:    1 MATLRIA-----RNCHRWLNKNQDYQYRSIFTTVQLQSSWMDKIKNVFTGQNTESGQQQPGIYQFTSDSFTLLNFADEMNKARKIGAFKEYMVGRSSEVTFATAFQKYEAIIRFLGALDPTGENLKTSQKQEAAKHCNCTIADVENALAKFTWAKEAHKKILKLNQEGKPMPKSVAELQKLVGTNPLDLARSNLAQSGQVSRNAFCPCGSKKRYKRCCGKD 216          
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|V7BQ09|V7BQ09_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G097900g PE=4 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.330e-109
Identity = 151/219 (68.95%), Postives = 179/219 (81.74%), Query Frame = 0
Query:    1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQKTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
            M   RIA++I++   +      H H +R+I  T  LQ SW+ K+KNV T QKT Q Q DAS+  S SFTL+ FADEMKKAR+IGAFKE+MVGRSS+ TF++AFEKYEAIIRYL   D TGENL+T+ KQEAAKHC CT+ADVENALAKFTWAKEAQKKI++L +EGKP PKS AE+QKLVG+ P+DLA+SNLAK+GQ+SRNAPCPCGSKKRYKRCCGKD
Sbjct:    1 MPLLRIASKILHSAANQSCK--HQHQHRTIFATTQLQGSWMEKVKNVITGQKTTQSQGDASEVNSDSFTLIRFADEMKKARRIGAFKEFMVGRSSEATFSSAFEKYEAIIRYLGVLDSTGENLQTAQKQEAAKHCGCTLADVENALAKFTWAKEAQKKIEKLKEEGKPTPKSFAEVQKLVGSTPLDLARSNLAKAGQISRNAPCPCGSKKRYKRCCGKD 217          
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3VHN1|A0A1S3VHN1_VIGRR (uncharacterized protein LOC106775273 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775273 PE=4 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 2.929e-106
Identity = 149/219 (68.04%), Postives = 177/219 (80.82%), Query Frame = 0
Query:    1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQKTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
            M   RIA++I+    H   N+     +R+I  T  LQ SW+ K+KNV T QKT Q Q D +Q  SGSFTLL FADEMK A+++GAFKE+MVGRSS+ TF++AFEKYEAIIRYL   D TGENL+T  KQ+AAKHC+CTIADVENALAKFTWAKEAQKKI++L +EGKP+PKS AELQKLVG+ P+DLA+SNLA+SGQ+SRNA CPCGSKKRYKRCCGKD
Sbjct:    1 MPLLRIASKIL----HSAGNQSCKCQHRTIFATAQLQGSWMEKVKNVITGQKTTQSQGDGAQADSGSFTLLRFADEMKNAKRVGAFKEFMVGRSSEATFSSAFEKYEAIIRYLGVLDPTGENLQTVQKQQAAKHCSCTIADVENALAKFTWAKEAQKKIEKLKEEGKPLPKSFAELQKLVGSTPLDLARSNLAQSGQISRNALCPCGSKKRYKRCCGKD 215          
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445LGM7|A0A445LGM7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_008120 PE=4 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 5.221e-105
Identity = 150/220 (68.18%), Postives = 179/220 (81.36%), Query Frame = 0
Query:    1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQK-TEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
            M + RI  +I      + +N+   + YR+IS+T  LQ SW+ K+KNV T QK T Q Q DASQ  S SFTLL FADEMK A++IGAFKE+MVGRSS+ TF++AF+KYEAIIR+L A D TGENL T+ KQEAAKHCNCTIADVE+ALAKFTWAKEAQKKIQ+L +EGKPMPKS AE+QKLVG+ P+DLA+SNLA++G +SRNA CPCGSKKRYKRCCGKD
Sbjct:    1 MPSLRILNKIC-----YSINQYCKYKYRTISSTAQLQGSWMEKVKNVITGQKSTPQSQGDASQVTSDSFTLLRFADEMKNAKRIGAFKEFMVGRSSEATFSSAFDKYEAIIRFLGALDPTGENLPTAQKQEAAKHCNCTIADVEDALAKFTWAKEAQKKIQKLKEEGKPMPKSFAEVQKLVGSTPLDLARSNLAQAGLISRNALCPCGSKKRYKRCCGKD 215          
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|K7KGU0|K7KGU0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100792311 PE=4 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 1.587e-102
Identity = 148/220 (67.27%), Postives = 176/220 (80.00%), Query Frame = 0
Query:    1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQK-TEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
            M + RI  +I      + +N+   + YR+IS+T  LQ SW+ K+KNV T QK T Q Q DASQ  S SFTLL FADEMK A++IGAFKE+M GRSS+ TF++AF+KYEAIIR L A D TGENL T+ KQEAAKHCNCTIADVE+ALAKFTWAKEAQKKIQ+L +EGKPMPKS AE+QKLVG+ P+DLA+SNLA++G +SRNA CPCGSKKRYKRCCG D
Sbjct:    1 MPSLRILNKIC-----YSINQNCKYKYRTISSTAQLQGSWMEKVKNVITGQKSTPQSQGDASQVTSDSFTLLRFADEMKNAKRIGAFKEFMAGRSSEATFSSAFDKYEAIIRSLGALDPTGENLPTAQKQEAAKHCNCTIADVEDALAKFTWAKEAQKKIQKLKEEGKPMPKSFAEVQKLVGSTPLDLARSNLAQAGLISRNALCPCGSKKRYKRCCGND 215          
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A151TXK4|A0A151TXK4_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_011036 PE=4 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.283e-101
Identity = 150/215 (69.77%), Postives = 176/215 (81.86%), Query Frame = 0
Query:    1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQK-TEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKR 214
            M+A RI ++I+     H +N   N+ +R+IS+T  LQ SW+ K+KNV T QK T Q Q DAS     SFTLL FADEMK AR+IGAFK+YMVGRSS+VTF TAFE+YEAIIRYL A D TGENL+T+ KQEAAKHCNCTIADVENALAKFTWAKEAQKKI++L +EGKPMPKS  E+QKLVG+ P+DLA+SNLA++GQVSRNA CPCGSKKRYKR
Sbjct:    1 MSALRIVSKIL-----HSVNHKCNYQFRTISSTAPLQGSWMEKVKNVMTGQKSTTQSQGDASD----SFTLLRFADEMKNARRIGAFKDYMVGRSSEVTFTTAFERYEAIIRYLGALDPTGENLQTAQKQEAAKHCNCTIADVENALAKFTWAKEAQKKIEKLQEEGKPMPKSFDEVQKLVGSTPLDLARSNLAQAGQVSRNAFCPCGSKKRYKR 206          
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445FKX7|A0A445FKX7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_052440 PE=4 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.023e-101
Identity = 146/220 (66.36%), Postives = 178/220 (80.91%), Query Frame = 0
Query:    1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQ-KTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
            M + RI  +I      + +N+     YR+IS+T  LQ SW+ K+KNV T Q  T Q Q DAS+    SF+LL FADEMK A++IGAFKE+MVGRSS+ TF++AF+KYEAIIR+L A D TGENL+T+ KQEAAKHCNCTIADVENALAKFTWAKEAQKK+++L +EGKPMPKS AE+QKLVG+ P+DLA+SNLA++GQ+SRNA CPCGSKKRYKRCCGKD
Sbjct:    1 MPSLRILNKIC-----YSINQNCKCQYRTISSTAQLQGSWMEKVKNVITGQNSTPQSQGDASE----SFSLLRFADEMKNAKRIGAFKEFMVGRSSEATFSSAFDKYEAIIRFLGALDPTGENLQTTQKQEAAKHCNCTIADVENALAKFTWAKEAQKKLEKLKEEGKPMPKSFAEVQKLVGSTPLDLARSNLAQAGQISRNALCPCGSKKRYKRCCGKD 211          
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|C6TA76|C6TA76_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100791282 PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.023e-101
Identity = 146/220 (66.36%), Postives = 178/220 (80.91%), Query Frame = 0
Query:    1 MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTPQ-KTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
            M + RI  +I      + +N+     YR+IS+T  LQ SW+ K+KNV T Q  T Q Q DAS+    SF+LL FADEMK A++IGAFKE+MVGRSS+ TF++AF+KYEAIIR+L A D TGENL+T+ KQEAAKHCNCTIADVENALAKFTWAKEAQKK+++L +EGKPMPKS AE+QKLVG+ P+DLA+SNLA++GQ+SRNA CPCGSKKRYKRCCGKD
Sbjct:    1 MPSLRILNKIC-----YSINQNCKCQYRTISSTAQLQGSWMEKVKNVITGQNSTPQSQGDASE----SFSLLRFADEMKNAKRIGAFKEFMVGRSSEATFSSAFDKYEAIIRFLGALDPTGENLQTTQKQEAAKHCNCTIADVENALAKFTWAKEAQKKLEKLKEEGKPMPKSFAEVQKLVGSTPLDLARSNLAQAGQISRNALCPCGSKKRYKRCCGKD 211          
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Match: tr|M5VZX4|M5VZX4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G337300 PE=4 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 1.605e-99
Identity = 142/192 (73.96%), Postives = 159/192 (82.81%), Query Frame = 0
Query:   28 RSISTTLHLQNSWINKIKNVFTPQKTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
            RSI +T HL NSW+NKIK VFT  KT   + +    P  SFTLL FADEMK AR+IGAFK+Y+VGRSS+ TFA AFEK EAIIRYL  FD TGENL  + KQEAAKHCNCTIADVENALAKFTWA+EAQKK++ L KEGKPMPK+I E+QKL+G+ P DLAKSNLAKSGQ+SRNA CPCGSKKRYKRCCGKD
Sbjct:   39 RSIFSTTHLDNSWVNKIKGVFTGNKTSSDETNPGSSPE-SFTLLRFADEMKNARRIGAFKQYIVGRSSEATFADAFEKQEAIIRYLGGFDSTGENLNVTQKQEAAKHCNCTIADVENALAKFTWAREAQKKMENLQKEGKPMPKNINEVQKLMGSTPFDLAKSNLAKSGQISRNALCPCGSKKRYKRCCGKD 229          
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. Araport11
Match: AT3G04950.1 (| SEC-C motif protein | Chr3:1371786-1373300 FORWARD LENGTH=231 | 201606)

HSP 1 Score: 266.544 bits (680), Expect = 1.062e-90
Identity = 126/198 (63.64%), Postives = 157/198 (79.29%), Query Frame = 0
Query:   22 IHNHHYRSISTTLHLQNSWINKIKNVFTPQKTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFATAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFTWAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSRNAPCPCGSKKRYKRCCGKD 219
            I +   RSI++T  L N W++ IK VFT  K + P L+ S  P  +FTLL FADE+K AR++G FK+Y+VGRSS+ TFA AFEK EA+IRYL A D TGENL+ S KQ+AAKHC CTI DVEN L+KFTWA++A KK+ EL + GKP+PK++ ELQK++G+ P+DLA+SNLAKSGQ+SRNA CPCGSKKRYKRCCGKD
Sbjct:   37 IPSQQQRSITSTAPL-NGWMDSIKGVFTGNK-DTP-LEESNLPVEAFTLLRFADELKNARRLGKFKQYIVGRSSEATFADAFEKQEAVIRYLGALDATGENLQASQKQDAAKHCKCTITDVENTLSKFTWARQAHKKMTELKEGGKPLPKNMGELQKMMGSTPMDLARSNLAKSGQISRNALCPCGSKKRYKRCCGKD 231          
The following BLAST results are available for this feature:
BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|G7L0S2|G7L0S2_MEDTR1.034e-12077.63Putative NTF2-like domain-containing protein OS=Me... [more]
tr|A0A1S2XUJ1|A0A1S2XUJ1_CICAR7.752e-11776.92uncharacterized protein LOC101492178 OS=Cicer arie... [more]
tr|V7BQ09|V7BQ09_PHAVU1.330e-10968.95Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
tr|A0A1S3VHN1|A0A1S3VHN1_VIGRR2.929e-10668.04uncharacterized protein LOC106775273 isoform X2 OS... [more]
tr|A0A445LGM7|A0A445LGM7_GLYSO5.221e-10568.18Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|K7KGU0|K7KGU0_SOYBN1.587e-10267.27Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A151TXK4|A0A151TXK4_CAJCA1.283e-10169.77Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|A0A445FKX7|A0A445FKX7_GLYSO2.023e-10166.36Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|C6TA76|C6TA76_SOYBN2.023e-10166.36Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|M5VZX4|M5VZX4_PRUPE1.605e-9973.96Uncharacterized protein OS=Prunus persica OX=3760 ... [more]
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BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. UniProtKB/TrEMBL
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Vfaba.Hedin2.R1.5g183480.1 vs. Araport11
Analysis Date: 2023-05-12 (Blastp of Vicia faba inbred line Hedin/2 v1.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G04950.11.062e-9063.64| SEC-C motif protein | Chr3:1371786-1373300 FORWA... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia faba inbred line Hedin/2 v1.0 proteins
Date Performed: 2023-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 90..218
e-value: 1.3E-7
score: 34.1
NoneNo IPR availablePANTHERPTHR36750SEC-C MOTIF PROTEINcoord: 1..219
NoneNo IPR availableSUPERFAMILY103642Sec-C motifcoord: 198..218
IPR004027SEC-C motifPFAMPF02810SEC-Ccoord: 200..218
e-value: 8.7E-7
score: 28.8
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 43..159

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vfaba.Hedin2.R1.5g183480.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g183480.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g183480.1; organism=Vicia faba; type=mRNA; length=660bp
ATGGCAGCATTTCGCATCGCAACCAGAATCATAAACCGTCACCACCATCA
CCCGTTAAATAAAATCCACAATCACCACTACCGTTCAATTTCCACCACAC
TCCACCTTCAAAATTCATGGATCAACAAGATCAAAAACGTCTTCACACCC
CAAAAAACCGAACAACCCCAACTAGACGCATCTCAATTCCCCTCCGGATC
ATTCACACTACTCGATTTCGCCGATGAAATGAAGAAAGCCAGAAAAATTG
GCGCGTTTAAAGAGTACATGGTTGGAAGAAGCAGCCAAGTTACTTTCGCT
ACTGCGTTTGAGAAATACGAAGCCATTATTCGATATCTCGCCGCTTTTGA
TTATACTGGAGAGAATTTGAAGACTAGTCATAAACAAGAAGCGGCCAAAC
ATTGTAATTGCACGATTGCGGATGTGGAGAATGCGCTAGCGAAGTTTACT
TGGGCTAAAGAAGCACAGAAGAAGATTCAGGAGTTGAATAAGGAAGGAAA
ACCAATGCCGAAAAGTATTGCTGAACTCCAAAAGCTGGTTGGTACAAATC
CAGTGGATCTTGCAAAGTCTAATTTGGCTAAAAGTGGACAAGTTAGCAGG
AATGCCCCCTGTCCATGTGGTTCAAAGAAAAGATATAAAAGATGCTGTGG
AAAGGATTGA
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protein sequence of Vfaba.Hedin2.R1.5g183480.1_vfh_v1

>Vfaba.Hedin2.R1.5g183480.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g183480.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g183480.1_vfh_v1; organism=Vicia faba; type=polypeptide; length=219bp
MAAFRIATRIINRHHHHPLNKIHNHHYRSISTTLHLQNSWINKIKNVFTP
QKTEQPQLDASQFPSGSFTLLDFADEMKKARKIGAFKEYMVGRSSQVTFA
TAFEKYEAIIRYLAAFDYTGENLKTSHKQEAAKHCNCTIADVENALAKFT
WAKEAQKKIQELNKEGKPMPKSIAELQKLVGTNPVDLAKSNLAKSGQVSR
NAPCPCGSKKRYKRCCGKD
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mRNA from alignment at chr5:1268782986..1268785630+

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vfaba.Hedin2.R1.5g183480.1_vfh_v1 ID=Vfaba.Hedin2.R1.5g183480.1_vfh_v1; Name=Vfaba.Hedin2.R1.5g183480.1; organism=Vicia faba; type=mRNA; location=Sequence derived from: chr5:1268782986..1268785630+ (Vicia faba
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004027SEC_C_motif
IPR036891Signal_recog_part_SRP54_M_sf
Vocabulary: Molecular Function
TermDefinition
GO:00083127S RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0048500signal recognition particle
Vocabulary: Biological Process
TermDefinition
GO:0006614SRP-dependent cotranslational protein targeting to membrane