evm.model.Chr01.159

Transcript Overview
Nameevm.model.Chr01.159
Unique Nameevm.model.Chr01.159_hau_v1
TypemRNA
OrganismVigna unguiculata subsp. sesquipedalis ()
Sequence length480
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr01chromosomeChr01:2291939..2293672 -Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.TU.Chr01.159evm.TU.Chr01.159_hau_v1Vigna unguiculata subsp. sesquipedalisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr01.159.exon6evm.model.Chr01.159.exon6_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr01.159.exon5evm.model.Chr01.159.exon5_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr01.159.exon4evm.model.Chr01.159.exon4_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr01.159.exon3evm.model.Chr01.159.exon3_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr01.159.exon2evm.model.Chr01.159.exon2_hau_v1Vigna unguiculata subsp. sesquipedalisexon
evm.model.Chr01.159.exon1evm.model.Chr01.159.exon1_hau_v1Vigna unguiculata subsp. sesquipedalisexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr01.159.utr3p1evm.model.Chr01.159.utr3p1_hau_v1Vigna unguiculata subsp. sesquipedalisthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.evm.model.Chr01.159cds.evm.model.Chr01.159_hau_v1_6Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr01.159cds.evm.model.Chr01.159_hau_v1_5Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr01.159cds.evm.model.Chr01.159_hau_v1_4Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr01.159cds.evm.model.Chr01.159_hau_v1_3Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr01.159cds.evm.model.Chr01.159_hau_v1_2Vigna unguiculata subsp. sesquipedalisCDS
cds.evm.model.Chr01.159cds.evm.model.Chr01.159_hau_v1Vigna unguiculata subsp. sesquipedalisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr01.159.utr5p1evm.model.Chr01.159.utr5p1_hau_v1Vigna unguiculata subsp. sesquipedalisfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
evm.model.Chr01.159_hau_v1evm.model.Chr01.159_hau_v1Vigna unguiculata subsp. sesquipedalispolypeptide
evm.model.Chr01.159_hau_v1evm.model.Chr01.159_hau_v1-proteinVigna unguiculata subsp. sesquipedalispolypeptide


Homology
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/Swiss-Prot
Match: sp|P17093|RS11_SOYBN (40S ribosomal protein S11 OS=Glycine max OX=3847 GN=RPS11 PE=2 SV=2)

HSP 1 Score: 322.783 bits (826), Expect = 4.266e-114
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLS+KKTGKGKRPGKGGNRFWKSIGLGFKTPREA+EGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISP FRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/Swiss-Prot
Match: sp|Q9M5M1|RS11_EUPES (40S ribosomal protein S11 OS=Euphorbia esula OX=3993 GN=RPS11 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.368e-99
Identity = 150/159 (94.34%), Postives = 155/159 (97.48%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFL+SKKTGKGKRPGKGGNRFWKSIGLGFKTPREA++GTYIDKKCPFTG VSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS G KKAFT +
Sbjct:    1 MAEQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCPFTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTAI 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/Swiss-Prot
Match: sp|P42733|RS113_ARATH (40S ribosomal protein S11-3 OS=Arabidopsis thaliana OX=3702 GN=RPS11C PE=2 SV=2)

HSP 1 Score: 279.256 bits (713), Expect = 8.110e-97
Identity = 143/159 (89.94%), Postives = 152/159 (95.60%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSK +GKGKRPGKGGNRFWK+IGLGFKTPREA++G YID KCPFTG VSIRGRILAGTCHSAKM RTIIVRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAG+S+  KKAFTG+
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/Swiss-Prot
Match: sp|P16181|RS111_ARATH (40S ribosomal protein S11-1 OS=Arabidopsis thaliana OX=3702 GN=RPS11A PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 6.247e-96
Identity = 145/160 (90.62%), Postives = 154/160 (96.25%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSG-AKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSKK+GKGKRPGKGGNRFWK+IGLGFKTPREA++G Y+DKKCPFTG VSIRGRILAGTCHSAKM RTIIVRR+YLHF+KKYQRYEKRHSNIPAH+SPCFRVKEGDH+IIGQCRPLSKTVRFNVLKVIPAGSSS   KKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/Swiss-Prot
Match: sp|O65569|RS112_ARATH (40S ribosomal protein S11-2 OS=Arabidopsis thaliana OX=3702 GN=RPS11B PE=2 SV=2)

HSP 1 Score: 275.018 bits (702), Expect = 3.896e-95
Identity = 144/159 (90.57%), Postives = 153/159 (96.23%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSKK+GKGKRPGKGGNRFWK+IGLGFKTPREA+EGTYID+KCPFTG VSIRGRIL+GTCHSAKM RTIIVRR+YLHF+KKY+RYEKRHSNIPAH+SPCFRVKEGD V IGQCRPLSKTVRFNVLKVIPAGSSS  KKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCPFTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKEGDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/Swiss-Prot
Match: sp|P25460|RS11_MAIZE (40S ribosomal protein S11 OS=Zea mays OX=4577 GN=RPS11 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.425e-91
Identity = 146/158 (92.41%), Postives = 154/158 (97.47%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTG 158
            MAEQTEKAFLKQPKVFLSSKK+GKGK+PGKGGNRFWKSIGLGFKTPREA+EGTYIDKKCPFTG VSIRGRI+AGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNV+KVIPAGS++  KKAFT 
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVVKVIPAGSAAAGKKAFTA 158
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/Swiss-Prot
Match: sp|P42756|RS11_DUNTE (40S ribosomal protein S11 OS=Dunaliella tertiolecta OX=3047 GN=RPS11 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 3.362e-76
Identity = 110/159 (69.18%), Postives = 132/159 (83.02%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAF KQ  V     K+ + K PGK G+RF+K++GL FKTP+EA++G Y+DKKCPFTGNVSIRGRIL G   S+KM RTIIVRR+YLHFI KY RYEKRH+NIPAH+SPCFRV++GD VIIGQCRPLSKT+RFNVL+VIP   ++G KK+F+G 
Sbjct:    1 MAEQTEKAFQKQVGV-TGCFKSKEKKAPGKSGHRFFKNVGLNFKTPKEAIDGNYVDKKCPFTGNVSIRGRILTGVVKSSKMMRTIIVRRDYLHFIPKYARYEKRHTNIPAHVSPCFRVRDGDTVIIGQCRPLSKTIRFNVLRVIPQAGATG-KKSFSGF 157
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/Swiss-Prot
Match: sp|P41115|RS11_XENLA (40S ribosomal protein S11 OS=Xenopus laevis OX=8355 GN=rps11 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.608e-66
Identity = 96/158 (60.76%), Postives = 124/158 (78.48%), Query Frame = 0 
Query:    1 MAE-QTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAF 156
            MA+ QTE+A+ KQP +F + K+  +G+   +   R+++S+GLGFKTPREA++GTYIDKKCPFTGNVSIRGRIL+G     KM RTI++RR+YLH+I+KY R+EKRH N+  H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV  A   +G KK F
Sbjct:    1 MADIQTERAYQKQPTIFQNKKRVLEGETGKEKLPRYYRSVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQVGDTVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/Swiss-Prot
Match: sp|Q54S90|RS11_DICDI (40S ribosomal protein S11 OS=Dictyostelium discoideum OX=44689 GN=rps11 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 4.550e-65
Identity = 100/157 (63.69%), Postives = 120/157 (76.43%), Query Frame = 0 
Query:    1 MAE-QTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAF 156
            MA+ Q EKAF KQ   F +  +    K  GK G R++K+IGLG++TP++A+EGTYIDKKCPFT +VSIRG IL GT  S KM RT++VRRNYLH+IKKY R+EKRHSNIPAH+SP F VKEGD V IGQCRPLSKTVRFNV+K   + +S    KAF
Sbjct:    1 MADIQAEKAFQKQQVSFKNRFQLKASK--GKEGIRYYKNIGLGYRTPKDAIEGTYIDKKCPFTSDVSIRGAILRGTVISTKMRRTLVVRRNYLHYIKKYNRFEKRHSNIPAHVSPAFNVKEGDSVTIGQCRPLSKTVRFNVIKHDISAASKKQFKAF 155
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/Swiss-Prot
Match: sp|P62282|RS11_RAT (40S ribosomal protein S11 OS=Rattus norvegicus OX=10116 GN=Rps11 PE=1 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 5.912e-65
Identity = 101/163 (61.96%), Postives = 125/163 (76.69%), Query Frame = 0 
Query:    1 MAE-QTEKAFLKQPKVFLSSKK-----TGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAF 156
            MA+ QTE+A+ KQP +F + K+     TGK K P     R++K+IGLGFKTP+EA+EGTYIDKKCPFTGNVSIRGRIL+G     KM RTI++RR+YLH+I+KY R+EKRH N+  H+SPCFR V+ GD V +G+CRPLSKTVRFNVLKV  A   +G KK F
Sbjct:    1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLP-----RYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKA---AGTKKQF 155
[Close]
BLAST of evm.model.Chr01.159 vs. Araport11
Match: AT5G23740.1 (| ribosomal protein S11-beta | Chr5:8008251-8009330 REVERSE LENGTH=159 | 201606)

HSP 1 Score: 279.256 bits (713), Expect = 8.297e-98
Identity = 143/159 (89.94%), Postives = 152/159 (95.60%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSK +GKGKRPGKGGNRFWK+IGLGFKTPREA++G YID KCPFTG VSIRGRILAGTCHSAKM RTIIVRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAG+S+  KKAFTG+
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159
[Close]
BLAST of evm.model.Chr01.159 vs. Araport11
Match: AT3G48930.1 (| Nucleic acid-binding%2C OB-fold-like protein | Chr3:18141017-18142189 REVERSE LENGTH=160 | 201606)

HSP 1 Score: 276.944 bits (707), Expect = 6.391e-97
Identity = 145/160 (90.62%), Postives = 154/160 (96.25%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSG-AKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSKK+GKGKRPGKGGNRFWK+IGLGFKTPREA++G Y+DKKCPFTG VSIRGRILAGTCHSAKM RTIIVRR+YLHF+KKYQRYEKRHSNIPAH+SPCFRVKEGDH+IIGQCRPLSKTVRFNVLKVIPAGSSS   KKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKEGDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160
[Close]
BLAST of evm.model.Chr01.159 vs. Araport11
Match: AT4G30800.1 (| Nucleic acid-binding%2C OB-fold-like protein | Chr4:15001216-15002392 FORWARD LENGTH=159 | 201606)

HSP 1 Score: 275.018 bits (702), Expect = 3.986e-96
Identity = 144/159 (90.57%), Postives = 153/159 (96.23%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSKK+GKGKRPGKGGNRFWK+IGLGFKTPREA+EGTYID+KCPFTG VSIRGRIL+GTCHSAKM RTIIVRR+YLHF+KKY+RYEKRHSNIPAH+SPCFRVKEGD V IGQCRPLSKTVRFNVLKVIPAGSSS  KKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCPFTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKEGDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6M464|A0A4D6M464_VIGUN (Small subunit ribosomal protein S11e OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g233 PE=3 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 3.272e-113
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SJ02|A0A0S3SJ02_PHAAN (Ribosomal_S17_N domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G156400 PE=3 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 8.690e-113
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREA+EGTYIDKKCPFTGNVS+RGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGNVSVRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3U1D0|A0A1S3U1D0_VIGRR (40S ribosomal protein S11 OS=Vigna radiata var. radiata OX=3916 GN=LOC106760887 PE=3 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 8.690e-113
Identity = 157/159 (98.74%), Postives = 159/159 (100.00%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREA+EGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTI+VRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/TrEMBL
Match: tr|V7CCT3|V7CCT3_PHAVU (Ribosomal_S17_N domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G173800g PE=3 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.333e-112
Identity = 156/159 (98.11%), Postives = 159/159 (100.00%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPR+A+EGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTI+VRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/TrEMBL
Match: tr|A0A445G506|A0A445G506_GLYSO (40S ribosomal protein S11 isoform A OS=Glycine soja OX=3848 GN=D0Y65_045459 PE=3 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 5.997e-112
Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREA+EGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISP FRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/TrEMBL
Match: tr|I1MU00|I1MU00_SOYBN (Ribosomal_S17_N domain-containing protein OS=Glycine max OX=3847 GN=100784140 PE=3 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 5.997e-112
Identity = 157/159 (98.74%), Postives = 158/159 (99.37%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREA+EGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISP FRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/TrEMBL
Match: tr|V7BL53|V7BL53_PHAVU (Ribosomal_S17_N domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G060600g PE=3 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.265e-111
Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGL FKTPR+A+EGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTI+VRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLSFKTPRDAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UMV1|A0A1S3UMV1_VIGRR (40S ribosomal protein S11 OS=Vigna radiata var. radiata OX=3916 GN=LOC106767085 PE=3 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 1.279e-111
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFL SKKTGKGKRPGKGGNRFWKSIGLGFKTPR+A+EGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLCSKKTGKGKRPGKGGNRFWKSIGLGFKTPRDAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/TrEMBL
Match: tr|C6SVJ4|C6SVJ4_SOYBN (Ribosomal_S17_N domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_13G165200 PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.575e-111
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLS+KKTGKGKRPGKGGNRFWKSIGLGFKTPREA+EGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISP FRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM
Sbjct:    1 MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
[Close]
BLAST of evm.model.Chr01.159 vs. UniProtKB/TrEMBL
Match: tr|V7CN37|V7CN37_PHAVU (Ribosomal_S17_N domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G254000g PE=3 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 2.263e-111
Identity = 155/159 (97.48%), Postives = 158/159 (99.37%), Query Frame = 0 
Query:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAVEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
            MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGL FKTPREA+EGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTI+VRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTG+
Sbjct:    1 MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLSFKTPREAIEGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIVVRRNYLHFIKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGI 159
The following BLAST results are available for this feature:
BLAST of evm.model.Chr01.159 vs. UniProtKB/Swiss-Prot
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|P17093|RS11_SOYBN4.266e-11498.1140S ribosomal protein S11 OS=Glycine max OX=3847 G... [more]
sp|Q9M5M1|RS11_EUPES2.368e-9994.3440S ribosomal protein S11 OS=Euphorbia esula OX=39... [more]
sp|P42733|RS113_ARATH8.110e-9789.9440S ribosomal protein S11-3 OS=Arabidopsis thalian... [more]
sp|P16181|RS111_ARATH6.247e-9690.6340S ribosomal protein S11-1 OS=Arabidopsis thalian... [more]
sp|O65569|RS112_ARATH3.896e-9590.5740S ribosomal protein S11-2 OS=Arabidopsis thalian... [more]
sp|P25460|RS11_MAIZE3.425e-9192.4140S ribosomal protein S11 OS=Zea mays OX=4577 GN=R... [more]
sp|P42756|RS11_DUNTE3.362e-7669.1840S ribosomal protein S11 OS=Dunaliella tertiolect... [more]
sp|P41115|RS11_XENLA8.608e-6660.7640S ribosomal protein S11 OS=Xenopus laevis OX=835... [more]
sp|Q54S90|RS11_DICDI4.550e-6563.6940S ribosomal protein S11 OS=Dictyostelium discoid... [more]
sp|P62282|RS11_RAT5.912e-6561.9640S ribosomal protein S11 OS=Rattus norvegicus OX=... [more]
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BLAST of evm.model.Chr01.159 vs. Araport11
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G23740.18.297e-9889.94| ribosomal protein S11-beta | Chr5:8008251-800933... [more]
AT3G48930.16.391e-9790.63| Nucleic acid-binding%2C OB-fold-like protein | C... [more]
AT4G30800.13.986e-9690.57| Nucleic acid-binding%2C OB-fold-like protein | C... [more]
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BLAST of evm.model.Chr01.159 vs. UniProtKB/TrEMBL
Analysis Date: 2023-06-13 (Blastp of Vigna unguiculata subsp. sesquipedalis line A147 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A4D6M464|A0A4D6M464_VIGUN3.272e-113100.00Small subunit ribosomal protein S11e OS=Vigna ungu... [more]
tr|A0A0S3SJ02|A0A0S3SJ02_PHAAN8.690e-11398.74Ribosomal_S17_N domain-containing protein OS=Vigna... [more]
tr|A0A1S3U1D0|A0A1S3U1D0_VIGRR8.690e-11398.7440S ribosomal protein S11 OS=Vigna radiata var. ra... [more]
tr|V7CCT3|V7CCT3_PHAVU2.333e-11298.11Ribosomal_S17_N domain-containing protein OS=Phase... [more]
tr|A0A445G506|A0A445G506_GLYSO5.997e-11298.7440S ribosomal protein S11 isoform A OS=Glycine soj... [more]
tr|I1MU00|I1MU00_SOYBN5.997e-11298.74Ribosomal_S17_N domain-containing protein OS=Glyci... [more]
tr|V7BL53|V7BL53_PHAVU1.265e-11197.48Ribosomal_S17_N domain-containing protein OS=Phase... [more]
tr|A0A1S3UMV1|A0A1S3UMV1_VIGRR1.279e-11198.1140S ribosomal protein S11 OS=Vigna radiata var. ra... [more]
tr|C6SVJ4|C6SVJ4_SOYBN1.575e-11198.11Ribosomal_S17_N domain-containing protein OS=Glyci... [more]
tr|V7CN37|V7CN37_PHAVU2.263e-11197.48Ribosomal_S17_N domain-containing protein OS=Phase... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0
Date Performed: 2023-06-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Ribosomal protein S17/S11PRINTSPR00973RIBOSOMALS17coord: 88..111
score: 37.75
coord: 131..138
score: 73.25
coord: 121..131
score: 60.91
IPR000266Ribosomal protein S17/S11PFAMPF00366Ribosomal_S17coord: 74..142
e-value: 3.0E-26
score: 91.3
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 10..150
NoneNo IPR availableGENE3D2.40.50.1000coord: 1..158
e-value: 1.7E-84
score: 283.6
IPR028333Ribosomal protein S17, archaeal/eukaryoticTIGRFAMTIGR03630TIGR03630coord: 54..143
e-value: 2.1E-34
score: 115.6
IPR03244040S ribosomal protein S11, N-terminalPFAMPF16205Ribosomal_S17_Ncoord: 4..72
e-value: 5.1E-32
score: 110.1
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 68..147

Sequences
The following sequences are available for this feature:

mRNA sequence

>evm.model.Chr01.159_hau_v1 ID=evm.model.Chr01.159_hau_v1; Name=evm.model.Chr01.159; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=480bp
ATGGCTGAACAAACCGAGAAGGCTTTTTTGAAGCAACCAAAAGTGTTCCT
CAGCTCGAAGAAAACTGGGAAGGGGAAGAGACCAGGGAAAGGTGGAAACC
GCTTTTGGAAATCCATTGGACTTGGATTCAAGACTCCCAGGGAAGCCGTC
GAAGGAACTTATATTGACAAGAAGTGCCCCTTCACTGGCAATGTCTCCAT
CCGTGGCCGTATCCTGGCTGGTACATGTCACAGTGCTAAGATGAACAGGA
CAATCATTGTTAGAAGGAATTATCTCCATTTCATTAAGAAGTACCAGAGG
TACGAGAAGAGGCACTCAAATATTCCTGCTCATATTTCACCTTGTTTCCG
TGTGAAGGAAGGAGATCATGTCATTATTGGTCAATGCAGGCCTCTCTCTA
AAACAGTGAGGTTCAATGTATTGAAAGTGATCCCTGCTGGTTCTTCTAGC
GGTGCTAAGAAGGCTTTTACTGGGATGTGA
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protein sequence of evm.model.Chr01.159_hau_v1

>evm.model.Chr01.159_hau_v1 ID=evm.model.Chr01.159_hau_v1; Name=evm.model.Chr01.159_hau_v1; organism=Vigna unguiculata subsp. sesquipedalis; type=polypeptide; length=159bp
MAEQTEKAFLKQPKVFLSSKKTGKGKRPGKGGNRFWKSIGLGFKTPREAV
EGTYIDKKCPFTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQR
YEKRHSNIPAHISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSS
GAKKAFTGM
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mRNA from alignment at Chr01:2291939..2293672-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>evm.model.Chr01.159_hau_v1 ID=evm.model.Chr01.159_hau_v1; Name=evm.model.Chr01.159; organism=Vigna unguiculata subsp. sesquipedalis; type=mRNA; length=1734bp; location=Sequence derived from: Chr01:2291939..2293672- (Vigna unguiculata subsp. sesquipedalis
GAGAGAAGTTATTTAGGGTTTTTGCGACGCCAACACTCTCCTCTGTAGCT
TCTGCCGTCAAGTACTTTCGTCATGGCTGAACAAGTATTCTTCATTTTTC
CATATTGTTTTATCAATTGTTCTTATGTTTTGTGTGAATCTTGTGTTGAT
TTTGTTTTAATTGTGTGTTGCAGACCGAGAAGGCTTTTTTGAAGCAACCA
AAAGTGTTCCTCAGGTATGTTACTTGGAAGAACGCTTAACTTTGTTGCCT
ACACTGTGATTTTGAGGCTGAATCGATTTTTGTTGTTGTTGTTTTGCTTG
CTTTCGCAGCTCGAAGAAAACTGGGAAGGGGAAGAGACCAGGGAAAGGTG
GAAACCGCTTTTGGAAATCCATTGGACTTGGATTCAAGACTCCCAGGGAA
GCCGTCGAAGGTATCTCTTTTTCATACCACTGGAAGAGTAACATTTGTTC
TGCCAAGTGTTAATCTACAGCTTATTGTTTTCGTTGTGTATTTTATTTTT
TTAAATTATTACACATGTTAAATGTTCTGCTGTGGAGTGTTTTGTGAATT
AGGTTAAAAGTCGCATTCTTCATGAAAGCCCTCTATTCTTTTAATTTGTA
TTGTTCACTTAAAAAAATGAATTCATAAAAAGCCTTTGATTATTAGTTTG
TGTCTATGGATGATATTTTGGAATGCTATTTTTACTCTGATGGTGTTTTC
TGTAAACATTTTTATGATTGTGTAGTTGCCTGTAGCCATGTTTTCTGTCT
TGGTTGGTAGAATAATAGGATGGCTTGAAATATATTTTGTATACGAAGCA
GAATAATATACATTTGTCTATGTAAATGAAAATCCAAATTTTGGTCAGGC
TATATTTCATGTCTTTATTATCTTCATGTGCTTGGGTTATTTCATGTGCA
AAGATATGGTTATTTCTTTTCTGTAAAATAGGTCATTTATACTTTCCAAC
CCTTTTTATCTATAATTTGTTCTAATTTCTAAGTGCAGGAACTTATATTG
ACAAGAAGTGCCCCTTCACTGGCAATGTCTCCATCCGTGGCCGTATCCTG
GCTGGTACATGTCACAGTGCTAAGATGAACAGGACAATCATTGTTAGAAG
GAATTATCTCCATTTCATTAAGAAGTACCAGAGGTATTTAAGCTGCCATG
CTTTCTTTTTGTCTGGTTAGGTTGTATTTATGTTTGAAGAAACATAATCG
GACTTCCTTTTTTGTGTAGGTACGAGAAGAGGCACTCAAATATTCCTGCT
CATATTTCACCTTGTTTCCGTGTGAAGGAAGGAGATCATGTCATTATTGG
TCAATGCAGGTGAGGTTTTATATAAATAATACTTTTTATTTGTATGGTGT
TGATATCTGTCTGATATTTACTTCTACCATTTATGCAGGCCTCTCTCTAA
AACAGTGAGGTTCAATGTATTGAAAGTGATCCCTGCTGGTTCTTCTAGCG
GTGCTAAGAAGGCTTTTACTGGGATGTGAGCTTTGTTTTCCAGTTTTATG
AGTTTAGATTATGTTGTACGCCGTGAATTTTGAAATCCATTAGTTTTTCT
TAGACAATGCAGACTCATCTCCCGTTTCCCATTATATTTAATTAGTTCTT
ATTTGGGTTTAAAGTTGTGGCATTGTTTTTAAACAGAGATCTAAATGTTT
CCCTAAATTAACATCATATATTTTCACTACTACGTTTGTTTATTGTTGCG
AACTAAAGTTGGAAGATTACTTTTTTTATTGTGC
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Coding sequence (CDS) from alignment at Chr01:2291939..2293672-

>evm.model.Chr01.159_hau_v1 ID=evm.model.Chr01.159_hau_v1; Name=evm.model.Chr01.159; organism=Vigna unguiculata subsp. sesquipedalis; type=CDS; length=480bp; location=Sequence derived from: Chr01:2291939..2293672- (Vigna unguiculata subsp. sesquipedalis
ATGGCTGAACAAACCGAGAAGGCTTTTTTGAAGCAACCAAAAGTGTTCCT
CAGCTCGAAGAAAACTGGGAAGGGGAAGAGACCAGGGAAAGGTGGAAACC
GCTTTTGGAAATCCATTGGACTTGGATTCAAGACTCCCAGGGAAGCCGTC
GAAGGAACTTATATTGACAAGAAGTGCCCCTTCACTGGCAATGTCTCCAT
CCGTGGCCGTATCCTGGCTGGTACATGTCACAGTGCTAAGATGAACAGGA
CAATCATTGTTAGAAGGAATTATCTCCATTTCATTAAGAAGTACCAGAGG
TACGAGAAGAGGCACTCAAATATTCCTGCTCATATTTCACCTTGTTTCCG
TGTGAAGGAAGGAGATCATGTCATTATTGGTCAATGCAGGCCTCTCTCTA
AAACAGTGAGGTTCAATGTATTGAAAGTGATCCCTGCTGGTTCTTCTAGC
GGTGCTAAGAAGGCTTTTACTGGGATGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000266Ribosomal_uS17
IPR028333Ribosomal_uS17_arc/euk
IPR032440Ribosomal_uS17_N
IPR012340NA-bd_OB-fold
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome