rna-XM_004496667.3

BLAST of rna-XM_004496667.3 vs. Araport11
Match: | (Symbols: Psb27-H1, LPA19 | LOW PSII ACCUMULATION 19 | chr1:1582747-1583648 REVERSE LENGTH=199)

HSP 1 Score: 203.371 bits (516), Expect = 1.992e-66
Identity = 108/163 (66.26%), Postives = 123/163 (75.46%), Query Frame = 0

Query:   46 RRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
            R  L   VG S    T  +  S L   A E+  D+ E   GVVGA K+LFDPNE+TKSGK LPKAYLKSAREVVKT+RES+ E P DNAKFRR+ADAAKESIR+YL +WRG +TVA EESYV L   I++LA FYSKAGPSAPLP+EVK+EILD LN AEEFL
Sbjct:   42 RGFLKCVVGASSFMATIEF--SGLQAQASEEKLDEGE---GVVGAFKTLFDPNERTKSGKELPKAYLKSAREVVKTMRESLKENPKDNAKFRRSADAAKESIRDYLSNWRGQKTVAGEESYVELENVIRALAKFYSKAGPSAPLPDEVKTEILDDLNKAEEFL 199          

BLAST of rna-XM_004496667.3 vs. Araport11
Match: | (Symbols: Psb27-H1, LPA19 | LOW PSII ACCUMULATION 19 | chr1:1582747-1583264 REVERSE LENGTH=145)

HSP 1 Score: 198.749 bits (504), Expect = 2.348e-65
Identity = 102/143 (71.33%), Postives = 116/143 (81.12%), Query Frame = 0

Query:   66 LSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
             S L   A E+  D+ E   GVVGA K+LFDPNE+TKSGK LPKAYLKSAREVVKT+RES+ E P DNAKFRR+ADAAKESIR+YL +WRG +TVA EESYV L   I++LA FYSKAGPSAPLP+EVK+EILD LN AEEFL
Sbjct:    6 FSGLQAQASEEKLDEGE---GVVGAFKTLFDPNERTKSGKELPKAYLKSAREVVKTMRESLKENPKDNAKFRRSADAAKESIRDYLSNWRGQKTVAGEESYVELENVIRALAKFYSKAGPSAPLPDEVKTEILDDLNKAEEFL 145          

BLAST of rna-XM_004496667.3 vs. UniProtKB/Swiss-Prot
Match: sp|Q9ZVZ9|PB27B_ARATH (Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSB27-2 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.903e-65
Identity = 108/163 (66.26%), Postives = 123/163 (75.46%), Query Frame = 0

Query:   46 RRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
            R  L   VG S    T  +  S L   A E+  D+ E   GVVGA K+LFDPNE+TKSGK LPKAYLKSAREVVKT+RES+ E P DNAKFRR+ADAAKESIR+YL +WRG +TVA EESYV L   I++LA FYSKAGPSAPLP+EVK+EILD LN AEEFL
Sbjct:   42 RGFLKCVVGASSFMATIEF--SGLQAQASEEKLDEGE---GVVGAFKTLFDPNERTKSGKELPKAYLKSAREVVKTMRESLKENPKDNAKFRRSADAAKESIRDYLSNWRGQKTVAGEESYVELENVIRALAKFYSKAGPSAPLPDEVKTEILDDLNKAEEFL 199          

BLAST of rna-XM_004496667.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S2Y0W0|A0A1S2Y0W0_CICAR (Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic OS=Cicer arietinum OX=3827 GN=LOC101490043 PE=3 SV=1)

HSP 1 Score: 424.476 bits (1090), Expect = 4.140e-150
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0

Query:    1 MAVTFAANMCSITSSKTKEGIKRFDIEDKLQSRSNIALLPPDASTRRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
            MAVTFAANMCSITSSKTKEGIKRFDIEDKLQSRSNIALLPPDASTRRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL
Sbjct:    1 MAVTFAANMCSITSSKTKEGIKRFDIEDKLQSRSNIALLPPDASTRRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208          

BLAST of rna-XM_004496667.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2Z6NYZ2|A0A2Z6NYZ2_TRISU (Photosystem II D1 processing protein PSB27-H2, chloroplastic OS=Trifolium subterraneum OX=3900 GN=TSUD_46240 PE=3 SV=1)

HSP 1 Score: 381.333 bits (978), Expect = 6.568e-133
Identity = 183/208 (87.98%), Postives = 195/208 (93.75%), Query Frame = 0

Query:    1 MAVTFAANMCSITSSKTKEGIKRFDIEDKLQSRSNIALLPPDASTRRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
            M+VTFAAN+CSITSSK  EGIKRFDIEDKLQSRSNI LLP + S+RRHLS+SVGTSL+TITC YGLSPLM WAEEKS DKEENDNGV+GAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRES+NE PDDNAKFRRTADAAKESIREYLGSWRGN T+AQEESY  LVKA++SLANFYSKAGPSAPLP EVKSEILDYLNTAE+FL
Sbjct:    1 MSVTFAANICSITSSKMPEGIKRFDIEDKLQSRSNIPLLPLETSSRRHLSISVGTSLVTITCCYGLSPLMAWAEEKSDDKEENDNGVIGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESLNEVPDDNAKFRRTADAAKESIREYLGSWRGNPTIAQEESYAALVKAVRSLANFYSKAGPSAPLPGEVKSEILDYLNTAEDFL 208          

BLAST of rna-XM_004496667.3 vs. UniProtKB/TrEMBL
Match: tr|A0A072W0T5|A0A072W0T5_MEDTR (Photosystem II Pbs27 protein OS=Medicago truncatula OX=3880 GN=MTR_1g103810 PE=3 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 2.231e-129
Identity = 182/208 (87.50%), Postives = 194/208 (93.27%), Query Frame = 0

Query:    1 MAVTFAANMCSITSSKTKEGIKRFDIEDKLQSRSNIALLPPDASTRRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
            MA TFAANM SITSS   EGIKRFDIEDKLQSRSNIA LP +AS+RRHLS+SVG SL+TITC +GLSPLM WAEEKSA+KEE D+GV+GAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRES+NE PDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESY  LVKA++SLANFYSKAGPSAPLP+EVKSEILDYLNTAEEFL
Sbjct:    1 MAATFAANMFSITSS---EGIKRFDIEDKLQSRSNIAQLPLEASSRRHLSISVGISLVTITCGHGLSPLMAWAEEKSANKEETDDGVIGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESLNEDPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYFALVKAVRSLANFYSKAGPSAPLPKEVKSEILDYLNTAEEFL 205          

BLAST of rna-XM_004496667.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3LNM7|A0A2K3LNM7_TRIPR (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g036137 PE=3 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 1.213e-126
Identity = 179/202 (88.61%), Postives = 189/202 (93.56%), Query Frame = 0

Query:    9 MCSITSS-KTKEGIKRF-DIEDKLQSRSNIALLPPDASTRRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
            MCSITSS K  EGIKRF DIEDKLQSRSNI LLP + S+RRHLS+S+GTSL+TITC YGLSPLM WAEEKS DKEENDNGV+GAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRES+NEAPDDNAKFRRTADAAKESIREYLGSWRGNQT+AQEESY  LVKA++SLANFYSKAGPSAPLP EVKSEILDYLNTAEEFL
Sbjct:    1 MCSITSSSKMPEGIKRFVDIEDKLQSRSNIPLLPLETSSRRHLSISIGTSLVTITCCYGLSPLMAWAEEKSDDKEENDNGVIGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESLNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTIAQEESYAALVKAVRSLANFYSKAGPSAPLPGEVKSEILDYLNTAEEFL 202          

BLAST of rna-XM_004496667.3 vs. UniProtKB/TrEMBL
Match: tr|A0A9D4WG32|A0A9D4WG32_PEA (Uncharacterized protein OS=Pisum sativum OX=3888 GN=KIW84_065625 PE=3 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 3.603e-120
Identity = 172/208 (82.69%), Postives = 188/208 (90.38%), Query Frame = 0

Query:    1 MAVTFAANMCSITSSKTKEGIKRFDIEDKLQSRSNIALLPPDASTRRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
            MAVTFAA+MCSIT+SKT + IKRFDIEDKLQSR NIAL P    +RRHLS SVGTSL+ ITC YGL PL VWAEEKS DKEEN+NGV+GA+KSLFDPNEKTKSGKVLPKAY+KSA+EVVKTLRES+NE  DDNAKFRRTADAAKESIREYLGSWRGN+TVAQEESYV LV A++SLANFYS+AGPSA LPEEVKSEILDYLNTAE+ L
Sbjct:    1 MAVTFAASMCSITNSKTPQEIKRFDIEDKLQSRFNIALSPNIGLSRRHLSTSVGTSLVAITC-YGLLPLTVWAEEKSDDKEENENGVIGAIKSLFDPNEKTKSGKVLPKAYIKSAKEVVKTLRESLNEVLDDNAKFRRTADAAKESIREYLGSWRGNKTVAQEESYVALVNAVRSLANFYSRAGPSASLPEEVKSEILDYLNTAEDSL 207          

BLAST of rna-XM_004496667.3 vs. UniProtKB/TrEMBL
Match: tr|A0A371EH66|A0A371EH66_MUCPR (Photosystem II D1 processing protein PSB27-H2, chloroplastic OS=Mucuna pruriens OX=157652 GN=PSB27-2 PE=3 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 1.203e-119
Identity = 171/209 (81.82%), Postives = 187/209 (89.47%), Query Frame = 0

Query:    1 MAVTFAANMCSITSSKTKEGIKRFDIEDKLQSRSNIALLPPDAST-RRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
            MA+  A NMCSIT SKT EGIKRFDIEDKLQSRSNIAL P +AS+ RRHL +S+G SL+T+TC  GLSP MVWAEEKS DKEE D G++GA+KSLFDPNEKTK GKVLPKAYLKSAREVVKTLRES+NEA DD AKFRRTAD+AKESIREYLGSWRGNQTVAQEESYV+L K ++SLANFYSKAGPSAPL +EVKSEILDYLNTAEEFL
Sbjct:    1 MAIILAVNMCSITHSKTVEGIKRFDIEDKLQSRSNIALPPLEASSSRRHLLISIGPSLVTLTC--GLSPPMVWAEEKSGDKEEEDKGIIGAIKSLFDPNEKTKLGKVLPKAYLKSAREVVKTLRESLNEATDDIAKFRRTADSAKESIREYLGSWRGNQTVAQEESYVILEKVVRSLANFYSKAGPSAPLSQEVKSEILDYLNTAEEFL 207          

BLAST of rna-XM_004496667.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8M2W4|A0A8B8M2W4_ABRPR (Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic isoform X1 OS=Abrus precatorius OX=3816 GN=LOC113870778 PE=3 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 5.979e-119
Identity = 173/209 (82.78%), Postives = 185/209 (88.52%), Query Frame = 0

Query:    1 MAVTFAANMCSITSSKTKEGIKRFDIEDKLQSRSNIALLPPDAST-RRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
            M +   ANMCSI SSKT E IKRFDIE +LQSRSNIAL P +AS+ RRHL V VGTSL+T+TC  GLSPLMVWAEEKSADKEE D  ++GA+KSLF PNEKTKSG VLPKAYLKSAREVVKTLRES+NEAPDD AKFRRTADAAKESIREYLGSWRG QTV QEESYV+L KAI+SLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL
Sbjct:    1 MTLILVANMCSIISSKTDERIKRFDIEGRLQSRSNIALPPLEASSSRRHLLVGVGTSLVTLTCC-GLSPLMVWAEEKSADKEEEDKSIIGAIKSLFYPNEKTKSGMVLPKAYLKSAREVVKTLRESLNEAPDDIAKFRRTADAAKESIREYLGSWRGKQTVVQEESYVILEKAIRSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208          

BLAST of rna-XM_004496667.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445JR62|A0A445JR62_GLYSO (Photosystem II D1 processing protein PSB27-H2, chloroplastic isoform A OS=Glycine soja OX=3848 GN=D0Y65_016617 PE=3 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.301e-118
Identity = 172/209 (82.30%), Postives = 187/209 (89.47%), Query Frame = 0

Query:    1 MAVTFAANMCSITSSKTKEGIKRFDIEDKLQSRSNIALLPPDAST-RRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
            MA+  AANMCSIT+SKT E IKRFDIEDKLQSRSNI L   +AS+ RRHL +SVG SL+T+TC  GLSP MVWAEEKS DKEE D GV+GA+KSLFDPNEKTKSGKVLPKAYLKSAREVVKT+RES+NE  DDNAKFRRTAD+AKESIREYLGSWRGNQTVAQEESYV+L K I+SLANFYSKAGPSAPL +EVKSEILDYLNTAEEFL
Sbjct:   21 MAIILAANMCSITNSKTVEVIKRFDIEDKLQSRSNIVLPRLEASSSRRHLLISVGPSLVTLTC--GLSPSMVWAEEKSGDKEEEDKGVIGAIKSLFDPNEKTKSGKVLPKAYLKSAREVVKTMRESLNEVTDDNAKFRRTADSAKESIREYLGSWRGNQTVAQEESYVILEKVIRSLANFYSKAGPSAPLSQEVKSEILDYLNTAEEFL 227          

BLAST of rna-XM_004496667.3 vs. UniProtKB/TrEMBL
Match: tr|A0A2K3MCA4|A0A2K3MCA4_TRIPR (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g044529 PE=3 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 8.254e-117
Identity = 162/181 (89.50%), Postives = 172/181 (95.03%), Query Frame = 0

Query:   28 DKLQSRSNIALLPPDASTRRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
            DKLQSRSNI LLP + S+RRHLS+S+GTSL+TITC YGLSPLM WAEEKS DKEENDNGV+GAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRES+NEAPDDNAKFRRTADAAKESIREYLGSWRGNQT+AQEESY  LVKA++SLANFYSKAGPSAPLP EVKSEILDYLNTAEEFL
Sbjct:    1 DKLQSRSNIPLLPLETSSRRHLSISIGTSLVTITCCYGLSPLMAWAEEKSDDKEENDNGVIGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESLNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTIAQEESYAALVKAVRSLANFYSKAGPSAPLPGEVKSEILDYLNTAEEFL 181          

BLAST of rna-XM_004496667.3 vs. UniProtKB/TrEMBL
Match: tr|I1KV46|I1KV46_SOYBN (Photosystem II D1 processing protein PSB27-H2, chloroplastic OS=Glycine max OX=3847 GN=100805317 PE=3 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 5.224e-116
Identity = 168/209 (80.38%), Postives = 184/209 (88.04%), Query Frame = 0

Query:    1 MAVTFAANMCSITSSKTKEGIKRFDIEDKLQSRSNIALLPPDAST-RRHLSVSVGTSLITITCSYGLSPLMVWAEEKSADKEENDNGVVGAVKSLFDPNEKTKSGKVLPKAYLKSAREVVKTLRESVNEAPDDNAKFRRTADAAKESIREYLGSWRGNQTVAQEESYVVLVKAIKSLANFYSKAGPSAPLPEEVKSEILDYLNTAEEFL 208
            MA+  AANMCSIT+SKT E IKR DIEDK+QSRSNIAL P +AS+ RRHL + VG SL+T+TC  GLSP  VWAEEKS DKEE D GV+GA+KSLFDPNEKTKSGKVLPKAYL+SAREVVKTLRES+NE  DDNAKFRRTAD+AKESIREYLGSWRGNQ VAQEESYV+L K I+SLAN+YSKAGPSAPL  EVKSEILDYLNTAEEFL
Sbjct:    1 MALILAANMCSITNSKTVEVIKRIDIEDKMQSRSNIALPPSEASSSRRHLLIGVGPSLLTLTC--GLSPPTVWAEEKSGDKEEEDKGVIGAIKSLFDPNEKTKSGKVLPKAYLRSAREVVKTLRESLNEGTDDNAKFRRTADSAKESIREYLGSWRGNQIVAQEESYVILEKVIRSLANYYSKAGPSAPLSHEVKSEILDYLNTAEEFL 207