Va02G065260.1

Transcript Overview
NameVa02G065260.1
Unique NameVa02G065260.1_Jingnong6
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length987
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr2chromosomeChr2:41147155..41151101 -Vigna angularis cv. Jingnong6 genome v1.7.1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjavjL011Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjavjL116Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjavjL147Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjavjR255Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anavjL0301Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjcanR310Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaR358Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
avjcanR351Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcanR354Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjcaR404Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
avjcaR407Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
avjcaR411Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
avjccR0605Cajanus cajan Asha genome v1.0Cajanus cajan
avjccR0684Cajanus cajan Asha genome v1.0Cajanus cajan
anavjL0732Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL0885Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL1147Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anavjL1208Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjpsR368Pisum sativum Cameor genome v1aPisum sativum
avjpsR397Pisum sativum Cameor genome v1aPisum sativum
avjvfhR357Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvfhR360Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjpvR388Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjpvR390Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjpvR395Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjpvR427Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjvfhR419Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvrvR256Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvrvR265Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvrvR298Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvrvR300Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvuR292Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvuR296Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvuR301Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvuR303Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvuR313Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvssR377Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR379Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR434Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR470Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjcarR340Cicer arietinum
avjcarR386Cicer arietinum
avjcarR388Cicer arietinum
avjcarR390Cicer arietinum
avjcarR393Cicer arietinum
avjccaR316Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjccaR323Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjccaR325Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjvumR286Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvumR296Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvumR304Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvumR308Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvumR311Vigna umbellata FF25 genome v1.0Vigna umbellata
avjccaR399Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjccaR406Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjvvaR358Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvvaR379Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvvaR388Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvvaR427Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvasR283Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvasR288Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvasR291Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvasR340Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvstR290Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvstR295Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvstR298Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvasR349Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvstR350Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvstR363Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvunR239Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjvunR245Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjvunR247Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjvunR259Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjpvfR368Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR375Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR379Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR385Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR422Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_004496550.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
PvulFLAVERTChr07.415Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Ca_16396Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_014658584.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun07g229700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigst.09G079800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigst.08G060100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Hedin2.R1.3g138080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_012718761.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cc_v2.0_04758.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.007G066560.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
XM_058884034.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Ca_04500Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-TanjilR_04667Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_08G00613.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg41060.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun10g119800.3Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Cc_v2.0_02177.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun10g119800.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun07g229700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.4g032800.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-KK1_007608Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_04021Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_09G00854.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg15229.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigan.09G143800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Va11G014910.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.08G075400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Va02G065260Va02G065260_Jingnong6Vigna angularisgene


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va02G065260.1:three_prime_UTR_1_Jingnong6Va02G065260.1:three_prime_UTR_1_Jingnong6Vigna angularisthree_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va02G065260.1:exon_1_Jingnong6Va02G065260.1:exon_1_Jingnong6Vigna angularisexon
Va02G065260.1:exon_2_Jingnong6Va02G065260.1:exon_2_Jingnong6Vigna angularisexon
Va02G065260.1:exon_3_Jingnong6Va02G065260.1:exon_3_Jingnong6Vigna angularisexon
Va02G065260.1:exon_4_Jingnong6Va02G065260.1:exon_4_Jingnong6Vigna angularisexon
Va02G065260.1:exon_5_Jingnong6Va02G065260.1:exon_5_Jingnong6Vigna angularisexon
Va02G065260.1:exon_6_Jingnong6Va02G065260.1:exon_6_Jingnong6Vigna angularisexon
Va02G065260.1:exon_7_Jingnong6Va02G065260.1:exon_7_Jingnong6Vigna angularisexon
Va02G065260.1:exon_8_Jingnong6Va02G065260.1:exon_8_Jingnong6Vigna angularisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va02G065260.1_Jingnong6-cdsVa02G065260.1_Jingnong6-cds-Chr2_Jingnong6:41147451..41147475Vigna angularisCDS
Va02G065260.1_Jingnong6-cdsVa02G065260.1_Jingnong6-cds-Chr2_Jingnong6:41147583..41148212Vigna angularisCDS
Va02G065260.1_Jingnong6-cdsVa02G065260.1_Jingnong6-cds-Chr2_Jingnong6:41148474..41148709Vigna angularisCDS
Va02G065260.1_Jingnong6-cdsVa02G065260.1_Jingnong6-cds-Chr2_Jingnong6:41148793..41148888Vigna angularisCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va02G065260.1:five_prime_UTR_1_Jingnong6Va02G065260.1:five_prime_UTR_1_Jingnong6Vigna angularisfive_prime_UTR
Va02G065260.1:five_prime_UTR_2_Jingnong6Va02G065260.1:five_prime_UTR_2_Jingnong6Vigna angularisfive_prime_UTR
Va02G065260.1:five_prime_UTR_3_Jingnong6Va02G065260.1:five_prime_UTR_3_Jingnong6Vigna angularisfive_prime_UTR
Va02G065260.1:five_prime_UTR_4_Jingnong6Va02G065260.1:five_prime_UTR_4_Jingnong6Vigna angularisfive_prime_UTR
Va02G065260.1:five_prime_UTR_5_Jingnong6Va02G065260.1:five_prime_UTR_5_Jingnong6Vigna angularisfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Va02G065260.1_Jingnong6Va02G065260.1_Jingnong6Vigna angularispolypeptide
Va02G065260.1_Jingnong6Va02G065260.1_Jingnong6-proteinVigna angularispolypeptide


Homology
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SMW9|A0A0S3SMW9_PHAAN (RRM domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G075400 PE=4 SV=1)

HSP 1 Score: 637.491 bits (1643), Expect = 0.000e+0
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE
Sbjct:   42 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 369
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0KPE2|A0A8T0KPE2_PHAAN (Serine/arginine-rich splicing factor OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0194280 PE=4 SV=1)

HSP 1 Score: 637.491 bits (1643), Expect = 0.000e+0
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE
Sbjct:   42 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 369
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6N6Y0|A0A4D6N6Y0_VIGUN (DNA-directed RNA polymerase subunit OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g3266 PE=3 SV=1)

HSP 1 Score: 631.328 bits (1627), Expect = 0.000e+0
Identity = 318/328 (96.95%), Postives = 320/328 (97.56%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAEAAIRALDR+EFGRKGRRLRVEWTKHERGVRRPSSSRR SANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRS SPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRRE ASPAYGRRSPSPYRRERE SDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSS SPRDT K SPENGHGSGSP+EKGNASPYNGYGRSPN VPDARDSPNYGGPESPMHERYRSQSPPADE
Sbjct:  892 MEDERDAEAAIRALDRVEFGRKGRRLRVEWTKHERGVRRPSSSRRPSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSPSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRRERASPAYGRRSPSPYRREREDSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSRSPRDTGKTSPENGHGSGSPNEKGNASPYNGYGRSPNAVPDARDSPNYGGPESPMHERYRSQSPPADE 1219
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TZP5|A0A0L9TZP5_PHAAN (RRM domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g215500 PE=4 SV=1)

HSP 1 Score: 624.009 bits (1608), Expect = 0.000e+0
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYR 320
            MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYR
Sbjct:   42 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYR 361
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V6U5|A0A1S3V6U5_VIGRR (Serine/arginine-rich splicing factor RS40 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106772285 PE=4 SV=1)

HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0
Identity = 323/328 (98.48%), Postives = 325/328 (99.09%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAEAAIRALDRIEFGR  RRLRVEWT+HERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKI+SVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDH ISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE
Sbjct:    1 MEDERDAEAAIRALDRIEFGR--RRLRVEWTRHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKILSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHGISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 326
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3V702|A0A1S3V702_VIGRR (Serine/arginine-rich splicing factor RS40 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106772285 PE=4 SV=1)

HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0
Identity = 323/328 (98.48%), Postives = 325/328 (99.09%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAEAAIRALDRIEFGR  RRLRVEWT+HERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKI+SVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDH ISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE
Sbjct:   42 MEDERDAEAAIRALDRIEFGR--RRLRVEWTRHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKILSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHGISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 367
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/TrEMBL
Match: tr|V7CC42|V7CC42_PHAVU (RRM domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G223800g PE=4 SV=1)

HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 317/328 (96.65%), Postives = 319/328 (97.26%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAEAAIRALDR+EFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRS SPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRRE ASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDH ISPSHS EERGR SPQNGRGSSHSPRDT K SPENGHGSGSP+EKGN SPYNGYGRSPNTVPD RDSPNYGGPESPMHERYRSQSPPADE
Sbjct:   46 MEDERDAEAAIRALDRVEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSPSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRRERASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHGISPSHSLEERGRKSPQNGRGSSHSPRDTGKTSPENGHGSGSPEEKGNPSPYNGYGRSPNTVPDPRDSPNYGGPESPMHERYRSQSPPADE 373
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8MH64|A0A8B8MH64_ABRPR (Serine/arginine-rich splicing factor RS40 isoform X1 OS=Abrus precatorius OX=3816 GN=LOC113873198 PE=4 SV=1)

HSP 1 Score: 540.036 bits (1390), Expect = 0.000e+0
Identity = 295/329 (89.67%), Postives = 304/329 (92.40%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSG-SPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAEAAIRALDR+EFGRKGRRLRVEWTKHERG+RRP+ SRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRD QRDRSRDGRRS SPYRRERGSPDYGRG SPYQRER SPDYGR RS SRSP RRE ASPAYGRRSPSPYRRER+GS+PVRDSSRSPYHKE  RTDH ISPS SP+ R R+SPQN RGSS SP DT K SPENGHGSG SPD KGN SPYNGYG SPNT+PD RDSPNYGGPESPMHERYRSQSPPA+E
Sbjct:   42 MEDERDAEAAIRALDRVEFGRKGRRLRVEWTKHERGIRRPAGSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDHQRDRSRDGRRSPSPYRRERGSPDYGRGASPYQRERSSPDYGRGRSHSRSPLRRERASPAYGRRSPSPYRRERDGSNPVRDSSRSPYHKEHERTDHGISPSRSPKGRERSSPQNDRGSSRSPYDTVKASPENGHGSGHSPDAKGNPSPYNGYGGSPNTMPDPRDSPNYGGPESPMHERYRSQSPPAEE 370
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8B8MGM3|A0A8B8MGM3_ABRPR (Serine/arginine-rich splicing factor RS40 isoform X2 OS=Abrus precatorius OX=3816 GN=LOC113873198 PE=4 SV=1)

HSP 1 Score: 539.65 bits (1389), Expect = 0.000e+0
Identity = 295/329 (89.67%), Postives = 304/329 (92.40%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSG-SPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAEAAIRALDR+EFGRKGRRLRVEWTKHERG+RRP+ SRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRD QRDRSRDGRRS SPYRRERGSPDYGRG SPYQRER SPDYGR RS SRSP RRE ASPAYGRRSPSPYRRER+GS+PVRDSSRSPYHKE  RTDH ISPS SP+ R R+SPQN RGSS SP DT K SPENGHGSG SPD KGN SPYNGYG SPNT+PD RDSPNYGGPESPMHERYRSQSPPA+E
Sbjct:    1 MEDERDAEAAIRALDRVEFGRKGRRLRVEWTKHERGIRRPAGSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDHQRDRSRDGRRSPSPYRRERGSPDYGRGASPYQRERSSPDYGRGRSHSRSPLRRERASPAYGRRSPSPYRRERDGSNPVRDSSRSPYHKEHERTDHGISPSRSPKGRERSSPQNDRGSSRSPYDTVKASPENGHGSGHSPDAKGNPSPYNGYGGSPNTMPDPRDSPNYGGPESPMHERYRSQSPPAEE 329
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/TrEMBL
Match: tr|A0A445F5G2|A0A445F5G2_GLYSO (Serine/arginine-rich splicing factor RS40 isoform B OS=Glycine soja OX=3848 GN=D0Y65_054226 PE=4 SV=1)

HSP 1 Score: 523.857 bits (1348), Expect = 0.000e+0
Identity = 302/330 (91.52%), Postives = 310/330 (93.94%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYG--RDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAEAAIRALDR+EFGRKGRRLRVEWTKHERGVR+P+SSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDR RDRSRDGRRS SPYRRERGSPDYGRGPSPYQRERGSPDYG  RDRSRSRSPPRRE ASPAYGRRS SP+RREREGS+PVRDSSRSPYHKERGRTDH ISPS SPE RG+ SPQNG GSS SP DT K SPENG GSGSPDEKGN SPYNGYG SPN +PD RDSPNYGGPESPMHERYRSQSPPA+E
Sbjct:   95 MEDERDAEAAIRALDRVEFGRKGRRLRVEWTKHERGVRKPASSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRHRDRSRDGRRSPSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRDRSRSRSPPRRERASPAYGRRSLSPHRREREGSEPVRDSSRSPYHKERGRTDHGISPSQSPEGRGKKSPQNGHGSSRSPHDTGKTSPENGLGSGSPDEKGNPSPYNGYGGSPNNMPDPRDSPNYGGPESPMHERYRSQSPPAEE 424
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/Swiss-Prot
Match: Serine/arginine-rich (splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 7.867e-85
Identity = 185/336 (55.06%), Postives = 221/336 (65.77%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANG--RPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSP---YQRERGSPDYGRDRSRSRSPPRREPASPAYGRR---SPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAE AIRALDR EFGRKGRRLRVEWTK ERG  + S      ++   RPSKTLFVINFD  +TRTRDLE+HFEPYGKIV+VRIRRNFAF+QYE+++DA+RAL+A+N SKL+D+VISVE+AVKDDD R NG+SPER   R+       RRS SPY+RERGSPDYGRG SP   Y++ER SPDYGR RS S     R   SP YGR    + SP RRER  S P +  SRSP +K        +SP+HSP +  + SP+NG G   SP +                E+  +SP NG   SP ++        Y G ESPM +    +SPPADE
Sbjct:   42 MEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPER---RRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR-GSPEYGRDRRGNDSPRRRERVAS-PTK-YSRSPNNKR-----ERMSPNHSPFK--KESPRNGVGEVESPIERR--------------ERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 350
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/Swiss-Prot
Match: Serine/arginine-rich (splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 7.788e-73
Identity = 181/348 (52.01%), Postives = 213/348 (61.21%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPS-KTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSP--YQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEK----ISP---ENGHGSGSP----------DEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAE AIRALDR E+GR GRRLRVEWTK++RG    S   R S++G    KTLFVINFD  +TRTRDLERHFEPYGKIV+VRIRRNFAF+QYE+++DA+RAL+ATN SKL+D+VISVE+AVKDDD R NGYSPER RDR  DR R          RERGSPDYGRG SP  ++RER SPDYGR                  GRRSPSPY+R R   D         Y ++  R +   SP +    R R SP+ GRG S SP   EK     SP   E    S SP            +  +SP NG   SP  + +      Y G +SP+ E   S+SPPA+E
Sbjct:   42 MEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDRRRRSPSPYR---RERGSPDYGRGASPVAHKRERTSPDYGR------------------GRRSPSPYKRARLSPD---------YKRDDRRRERVASPENG-AVRNR-SPRKGRGESRSPPPYEKRRESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIRES-PSRSPPAEE 356
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/Swiss-Prot
Match: Serine/arginine-rich (splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.838e-62
Identity = 132/235 (56.17%), Postives = 157/235 (66.81%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDR--RNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRS----RSRSPPRRE-PASPAYGRRSPSPYRRERE-GSDPVRDSSRSP 227
             EDERDAE AIR LD   FG + RRL VEW K ERG  RP    ++ +N +P+KTLFVINFD   T+  D+E+HFEPYGK+ +VRIRRNF+FVQ+E+++DA++ALEAT  SK+LDRV+SVE+A+KDDD+R  RNG              R  RRSLSP  R R SPDYGR PSP Q  R SPDYGR RS    R + P   E   SP YGRRS S Y R+R  G D  R  SRSP
Sbjct:   42 FEDERDAEDAIRKLDNFPFGYEKRRLSVEWAKGERG--RPRGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNG-------------GRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRPSPDYGRARSPEYDRYKGPAAYERRRSPDYGRRS-SDYGRQRSPGYDRYR--SRSP 258
[Close]
BLAST of Va02G065260.1 vs. UniProtKB/Swiss-Prot
Match: Serine/arginine-rich (splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 5.961e-51
Identity = 103/207 (49.76%), Postives = 136/207 (65.70%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGR----------GPSPYQRERGSPDYGR-----DRSRSRSP 192
             EDERDAE AIR  D   FG   R+L VEW K  +G R      ++ +N RP+KTLFVINFD   TR RD+ERHFEPYGK+++VR+RRNFAFVQ+ +++DA++AL++T+ SKLLD+V+SVE+A+++  +R + Y+  R            RRS SP  R R SPDY R          GP+PY+R R SPDYGR      R+R+RSP
Sbjct:   42 FEDERDAEDAIRRTDNTTFGYGRRKLSVEWAKDFQGERGKPRDGKAVSNQRPTKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRYAGSR-----------RRRSPSPVYRRRPSPDYTRRRSPEYDRYKGPAPYER-RKSPDYGRRSSDYGRARARSP 236
[Close]
BLAST of Va02G065260.1 vs. Araport11
Match: | (Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ATRSP35 | arginine/serine-rich splicing factor 35, arginine/serine-rich splicing factor 40, ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35 | chr4:13025850-13027243 FORWARD LENGTH=317)

HSP 1 Score: 263.077 bits (671), Expect = 2.582e-86
Identity = 185/336 (55.06%), Postives = 221/336 (65.77%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANG--RPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSP---YQRERGSPDYGRDRSRSRSPPRREPASPAYGRR---SPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAE AIRALDR EFGRKGRRLRVEWTK ERG  + S      ++   RPSKTLFVINFD  +TRTRDLE+HFEPYGKIV+VRIRRNFAF+QYE+++DA+RAL+A+N SKL+D+VISVE+AVKDDD R NG+SPER   R+       RRS SPY+RERGSPDYGRG SP   Y++ER SPDYGR RS S     R   SP YGR    + SP RRER  S P +  SRSP +K        +SP+HSP +  + SP+NG G   SP +                E+  +SP NG   SP ++        Y G ESPM +    +SPPADE
Sbjct:    9 MEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPER---RRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR-GSPEYGRDRRGNDSPRRRERVAS-PTK-YSRSPNNKR-----ERMSPNHSPFK--KESPRNGVGEVESPIERR--------------ERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 317
[Close]
BLAST of Va02G065260.1 vs. Araport11
Match: | (Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ATRSP35 | arginine/serine-rich splicing factor 35, arginine/serine-rich splicing factor 40, ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35 | chr4:13025850-13027243 FORWARD LENGTH=317)

HSP 1 Score: 263.077 bits (671), Expect = 2.582e-86
Identity = 185/336 (55.06%), Postives = 221/336 (65.77%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANG--RPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSP---YQRERGSPDYGRDRSRSRSPPRREPASPAYGRR---SPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAE AIRALDR EFGRKGRRLRVEWTK ERG  + S      ++   RPSKTLFVINFD  +TRTRDLE+HFEPYGKIV+VRIRRNFAF+QYE+++DA+RAL+A+N SKL+D+VISVE+AVKDDD R NG+SPER   R+       RRS SPY+RERGSPDYGRG SP   Y++ER SPDYGR RS S     R   SP YGR    + SP RRER  S P +  SRSP +K        +SP+HSP +  + SP+NG G   SP +                E+  +SP NG   SP ++        Y G ESPM +    +SPPADE
Sbjct:    9 MEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPER---RRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR-GSPEYGRDRRGNDSPRRRERVAS-PTK-YSRSPNNKR-----ERMSPNHSPFK--KESPRNGVGEVESPIERR--------------ERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 317
[Close]
BLAST of Va02G065260.1 vs. Araport11
Match: | (Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ATRSP35 | arginine/serine-rich splicing factor 35, arginine/serine-rich splicing factor 40, ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35 | chr4:13025168-13027243 FORWARD LENGTH=350)

HSP 1 Score: 262.692 bits (670), Expect = 8.198e-86
Identity = 185/336 (55.06%), Postives = 221/336 (65.77%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANG--RPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSP---YQRERGSPDYGRDRSRSRSPPRREPASPAYGRR---SPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAE AIRALDR EFGRKGRRLRVEWTK ERG  + S      ++   RPSKTLFVINFD  +TRTRDLE+HFEPYGKIV+VRIRRNFAF+QYE+++DA+RAL+A+N SKL+D+VISVE+AVKDDD R NG+SPER   R+       RRS SPY+RERGSPDYGRG SP   Y++ER SPDYGR RS S     R   SP YGR    + SP RRER  S P +  SRSP +K        +SP+HSP +  + SP+NG G   SP +                E+  +SP NG   SP ++        Y G ESPM +    +SPPADE
Sbjct:   42 MEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPER---RRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR-GSPEYGRDRRGNDSPRRRERVAS-PTK-YSRSPNNKR-----ERMSPNHSPFK--KESPRNGVGEVESPIERR--------------ERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 350
[Close]
BLAST of Va02G065260.1 vs. Araport11
Match: | (Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ATRSP35 | arginine/serine-rich splicing factor 35, arginine/serine-rich splicing factor 40, ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35 | chr4:13025168-13027243 FORWARD LENGTH=350)

HSP 1 Score: 262.692 bits (670), Expect = 8.198e-86
Identity = 185/336 (55.06%), Postives = 221/336 (65.77%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANG--RPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSP---YQRERGSPDYGRDRSRSRSPPRREPASPAYGRR---SPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAE AIRALDR EFGRKGRRLRVEWTK ERG  + S      ++   RPSKTLFVINFD  +TRTRDLE+HFEPYGKIV+VRIRRNFAF+QYE+++DA+RAL+A+N SKL+D+VISVE+AVKDDD R NG+SPER   R+       RRS SPY+RERGSPDYGRG SP   Y++ER SPDYGR RS S     R   SP YGR    + SP RRER  S P +  SRSP +K        +SP+HSP +  + SP+NG G   SP +                E+  +SP NG   SP ++        Y G ESPM +    +SPPADE
Sbjct:   42 MEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPER---RRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR-GSPEYGRDRRGNDSPRRRERVAS-PTK-YSRSPNNKR-----ERMSPNHSPFK--KESPRNGVGEVESPIERR--------------ERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 350
[Close]
BLAST of Va02G065260.1 vs. Araport11
Match: | (Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ATRSP35 | arginine/serine-rich splicing factor 35, arginine/serine-rich splicing factor 40, ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35 | chr4:13026013-13027243 FORWARD LENGTH=329)

HSP 1 Score: 261.922 bits (668), Expect = 9.056e-86
Identity = 185/336 (55.06%), Postives = 221/336 (65.77%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANG--RPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSP---YQRERGSPDYGRDRSRSRSPPRREPASPAYGRR---SPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAE AIRALDR EFGRKGRRLRVEWTK ERG  + S      ++   RPSKTLFVINFD  +TRTRDLE+HFEPYGKIV+VRIRRNFAF+QYE+++DA+RAL+A+N SKL+D+VISVE+AVKDDD R NG+SPER   R+       RRS SPY+RERGSPDYGRG SP   Y++ER SPDYGR RS S     R   SP YGR    + SP RRER  S P +  SRSP +K        +SP+HSP +  + SP+NG G   SP +                E+  +SP NG   SP ++        Y G ESPM +    +SPPADE
Sbjct:   21 MEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPER---RRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR-GSPEYGRDRRGNDSPRRRERVAS-PTK-YSRSPNNKR-----ERMSPNHSPFK--KESPRNGVGEVESPIERR--------------ERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 329
[Close]
BLAST of Va02G065260.1 vs. Araport11
Match: | (Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ATRSP35 | arginine/serine-rich splicing factor 35, arginine/serine-rich splicing factor 40, ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35 | chr4:13026013-13027243 FORWARD LENGTH=329)

HSP 1 Score: 261.922 bits (668), Expect = 9.056e-86
Identity = 185/336 (55.06%), Postives = 221/336 (65.77%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANG--RPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSP---YQRERGSPDYGRDRSRSRSPPRREPASPAYGRR---SPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAE AIRALDR EFGRKGRRLRVEWTK ERG  + S      ++   RPSKTLFVINFD  +TRTRDLE+HFEPYGKIV+VRIRRNFAF+QYE+++DA+RAL+A+N SKL+D+VISVE+AVKDDD R NG+SPER   R+       RRS SPY+RERGSPDYGRG SP   Y++ER SPDYGR RS S     R   SP YGR    + SP RRER  S P +  SRSP +K        +SP+HSP +  + SP+NG G   SP +                E+  +SP NG   SP ++        Y G ESPM +    +SPPADE
Sbjct:   21 MEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPER---RRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR-GSPEYGRDRRGNDSPRRRERVAS-PTK-YSRSPNNKR-----ERMSPNHSPFK--KESPRNGVGEVESPIERR--------------ERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 329
[Close]
BLAST of Va02G065260.1 vs. Araport11
Match: | (Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ATRSP35 | arginine/serine-rich splicing factor 35, arginine/serine-rich splicing factor 40, ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35 | chr4:13026013-13027243 FORWARD LENGTH=329)

HSP 1 Score: 261.922 bits (668), Expect = 9.056e-86
Identity = 185/336 (55.06%), Postives = 221/336 (65.77%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANG--RPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSP---YQRERGSPDYGRDRSRSRSPPRREPASPAYGRR---SPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAE AIRALDR EFGRKGRRLRVEWTK ERG  + S      ++   RPSKTLFVINFD  +TRTRDLE+HFEPYGKIV+VRIRRNFAF+QYE+++DA+RAL+A+N SKL+D+VISVE+AVKDDD R NG+SPER   R+       RRS SPY+RERGSPDYGRG SP   Y++ER SPDYGR RS S     R   SP YGR    + SP RRER  S P +  SRSP +K        +SP+HSP +  + SP+NG G   SP +                E+  +SP NG   SP ++        Y G ESPM +    +SPPADE
Sbjct:   21 MEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPER---RRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR-GSPEYGRDRRGNDSPRRRERVAS-PTK-YSRSPNNKR-----ERMSPNHSPFK--KESPRNGVGEVESPIERR--------------ERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 329
[Close]
BLAST of Va02G065260.1 vs. Araport11
Match: | (Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ATRSP35 | arginine/serine-rich splicing factor 35, arginine/serine-rich splicing factor 40, ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35 | chr4:13026013-13027243 FORWARD LENGTH=329)

HSP 1 Score: 261.922 bits (668), Expect = 9.056e-86
Identity = 185/336 (55.06%), Postives = 221/336 (65.77%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANG--RPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSP---YQRERGSPDYGRDRSRSRSPPRREPASPAYGRR---SPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAE AIRALDR EFGRKGRRLRVEWTK ERG  + S      ++   RPSKTLFVINFD  +TRTRDLE+HFEPYGKIV+VRIRRNFAF+QYE+++DA+RAL+A+N SKL+D+VISVE+AVKDDD R NG+SPER   R+       RRS SPY+RERGSPDYGRG SP   Y++ER SPDYGR RS S     R   SP YGR    + SP RRER  S P +  SRSP +K        +SP+HSP +  + SP+NG G   SP +                E+  +SP NG   SP ++        Y G ESPM +    +SPPADE
Sbjct:   21 MEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPER---RRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRR-GSPEYGRDRRGNDSPRRRERVAS-PTK-YSRSPNNKR-----ERMSPNHSPFK--KESPRNGVGEVESPIERR--------------ERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKSRSPRSPPADE 329
[Close]
BLAST of Va02G065260.1 vs. Araport11
Match: | (Symbols: ATRSP41, RS41, At-RS41 | arginine/serine-rich splicing factor 41 | chr5:21131881-21133318 FORWARD LENGTH=324)

HSP 1 Score: 235.728 bits (600), Expect = 1.272e-75
Identity = 181/348 (52.01%), Postives = 213/348 (61.21%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPS-KTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSP--YQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEK----ISP---ENGHGSGSP----------DEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAE AIRALDR E+GR GRRLRVEWTK++RG    S   R S++G    KTLFVINFD  +TRTRDLERHFEPYGKIV+VRIRRNFAF+QYE+++DA+RAL+ATN SKL+D+VISVE+AVKDDD R NGYSPER RDR  DR R          RERGSPDYGRG SP  ++RER SPDYGR                  GRRSPSPY+R R   D         Y ++  R +   SP +    R R SP+ GRG S SP   EK     SP   E    S SP            +  +SP NG   SP  + +      Y G +SP+ E   S+SPPA+E
Sbjct:    9 MEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDRRRRSPSPYR---RERGSPDYGRGASPVAHKRERTSPDYGR------------------GRRSPSPYKRARLSPD---------YKRDDRRRERVASPENG-AVRNR-SPRKGRGESRSPPPYEKRRESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIRESSPSRSPPAEE 324
[Close]
BLAST of Va02G065260.1 vs. Araport11
Match: | (Symbols: ATRSP41, RS41, At-RS41 | arginine/serine-rich splicing factor 41 | chr5:21131081-21133318 FORWARD LENGTH=357)

HSP 1 Score: 235.728 bits (600), Expect = 3.455e-75
Identity = 181/348 (52.01%), Postives = 213/348 (61.21%), Query Frame = 0 
Query:    1 MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANGRPS-KTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSLSPYRRERGSPDYGRGPSP--YQRERGSPDYGRDRSRSRSPPRREPASPAYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGRTSPQNGRGSSHSPRDTEK----ISP---ENGHGSGSP----------DEKGNASPYNGYGRSPNTVPDARDSPNYGGPESPMHERYRSQSPPADE 328
            MEDERDAE AIRALDR E+GR GRRLRVEWTK++RG    S   R S++G    KTLFVINFD  +TRTRDLERHFEPYGKIV+VRIRRNFAF+QYE+++DA+RAL+ATN SKL+D+VISVE+AVKDDD R NGYSPER RDR  DR R          RERGSPDYGRG SP  ++RER SPDYGR                  GRRSPSPY+R R   D         Y ++  R +   SP +    R R SP+ GRG S SP   EK     SP   E    S SP            +  +SP NG   SP  + +      Y G +SP+ E   S+SPPA+E
Sbjct:   42 MEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSPERRRDRSPDRRRRSPSPYR---RERGSPDYGRGASPVAHKRERTSPDYGR------------------GRRSPSPYKRARLSPD---------YKRDDRRRERVASPENG-AVRNR-SPRKGRGESRSPPPYEKRRESRSPPPYEKRRESRSPPPYEKRRERSRSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIRESSPSRSPPAEE 357
The following BLAST results are available for this feature:
BLAST of Va02G065260.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3SMW9|A0A0S3SMW9_PHAAN0.000e+0100.00RRM domain-containing protein OS=Vigna angularis v... [more]
tr|A0A8T0KPE2|A0A8T0KPE2_PHAAN0.000e+0100.00Serine/arginine-rich splicing factor OS=Phaseolus ... [more]
tr|A0A4D6N6Y0|A0A4D6N6Y0_VIGUN0.000e+096.95DNA-directed RNA polymerase subunit OS=Vigna ungui... [more]
tr|A0A0L9TZP5|A0A0L9TZP5_PHAAN0.000e+0100.00RRM domain-containing protein OS=Phaseolus angular... [more]
tr|A0A1S3V6U5|A0A1S3V6U5_VIGRR0.000e+098.48Serine/arginine-rich splicing factor RS40 isoform ... [more]
tr|A0A1S3V702|A0A1S3V702_VIGRR0.000e+098.48Serine/arginine-rich splicing factor RS40 isoform ... [more]
tr|V7CC42|V7CC42_PHAVU0.000e+096.65RRM domain-containing protein OS=Phaseolus vulgari... [more]
tr|A0A8B8MH64|A0A8B8MH64_ABRPR0.000e+089.67Serine/arginine-rich splicing factor RS40 isoform ... [more]
tr|A0A8B8MGM3|A0A8B8MGM3_ABRPR0.000e+089.67Serine/arginine-rich splicing factor RS40 isoform ... [more]
tr|A0A445F5G2|A0A445F5G2_GLYSO0.000e+091.52Serine/arginine-rich splicing factor RS40 isoform ... [more]
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BLAST of Va02G065260.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
Serine/arginine-rich7.867e-8555.06splicing factor RS40 OS=Arabidopsis thaliana OX=37... [more]
Serine/arginine-rich7.788e-7352.01splicing factor RS41 OS=Arabidopsis thaliana OX=37... [more]
Serine/arginine-rich1.838e-6256.17splicing factor RS31 OS=Arabidopsis thaliana OX=37... [more]
Serine/arginine-rich5.961e-5149.76splicing factor RS31A OS=Arabidopsis thaliana OX=3... [more]
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BLAST of Va02G065260.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|2.582e-8655.06Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ... [more]
|2.582e-8655.06Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ... [more]
|8.198e-8655.06Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ... [more]
|8.198e-8655.06Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ... [more]
|9.056e-8655.06Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ... [more]
|9.056e-8655.06Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ... [more]
|9.056e-8655.06Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ... [more]
|9.056e-8655.06Symbols: RS40, At-RS40, ATRSP40, AT-SRP40, RSP35, ... [more]
|1.272e-7552.01Symbols: ATRSP41, RS41, At-RS41 | arginine/serine-... [more]
|3.455e-7552.01Symbols: ATRSP41, RS41, At-RS41 | arginine/serine-... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.70.330:FF:000299coord: 46..136
e-value: 3.6E-49
score: 166.6
NoneNo IPR availablePANTHERPTHR23189RNA RECOGNITION MOTIF-CONTAININGcoord: 2..297
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 56..118
e-value: 3.7E-10
score: 50.8
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 54..125
score: 15.852027
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 40..135
e-value: 1.5E-21
score: 78.4
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 1..51
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 39..131

Sequences
The following sequences are available for this feature:

mRNA sequence

>Va02G065260.1_Jingnong6 ID=Va02G065260.1_Jingnong6; Name=Va02G065260.1; organism=Vigna angularis; type=mRNA; length=987bp
ATGGAAGATGAAAGAGATGCTGAGGCTGCTATTCGTGCTCTTGATCGAAT
TGAATTTGGTCGTAAGGGACGAAGACTCCGTGTGGAATGGACAAAGCATG
AACGTGGTGTTAGAAGGCCATCTAGTTCAAGAAGATCTTCAGCTAATGGG
AGGCCATCAAAGACCTTGTTTGTAATTAATTTTGATACATACCATACCAG
AACAAGGGACTTAGAGAGGCACTTTGAACCGTATGGTAAGATAGTCAGTG
TTAGGATCAGAAGGAATTTTGCTTTTGTTCAGTATGAATCGGAGGATGAT
GCTAGCAGAGCACTGGAAGCTACAAATATGAGTAAGTTACTGGATCGAGT
AATTTCAGTTGAATTTGCTGTAAAAGATGATGATGATAGGAGAAATGGAT
ATAGCCCTGAGAGAGGCCGTGATCGTCAGCGTGATAGAAGCCGTGATGGA
AGAAGATCCCTTAGTCCTTATAGGAGAGAAAGAGGTAGTCCTGATTACGG
TCGTGGGCCCAGTCCATATCAGAGAGAGAGGGGAAGTCCTGACTATGGCC
GTGACCGAAGCCGTAGCAGAAGCCCCCCTAGAAGGGAGCCAGCTAGCCCT
GCATATGGACGTAGAAGCCCCAGTCCATATAGAAGAGAAAGGGAGGGTTC
TGATCCTGTTAGGGACTCCAGCCGCAGTCCTTATCACAAAGAGCGAGGGA
GAACTGACCATGCCATTTCTCCTTCTCATAGTCCTGAAGAAAGAGGGAGA
ACAAGTCCTCAAAATGGTCGTGGTTCTAGCCATAGTCCTCGTGATACTGA
GAAGATTAGCCCTGAAAATGGACATGGCTCTGGAAGTCCCGATGAAAAAG
GGAATGCCAGCCCTTACAATGGTTATGGAAGGAGCCCAAATACCGTGCCT
GATGCTAGGGACAGTCCTAACTACGGTGGTCCTGAAAGTCCGATGCATGA
AAGATATCGCAGCCAGTCTCCCCCTGCGGACGAATGA
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protein sequence of Va02G065260.1_Jingnong6

>Va02G065260.1_Jingnong6 ID=Va02G065260.1_Jingnong6; Name=Va02G065260.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=328bp
MEDERDAEAAIRALDRIEFGRKGRRLRVEWTKHERGVRRPSSSRRSSANG
RPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDD
ASRALEATNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDG
RRSLSPYRRERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPRREPASP
AYGRRSPSPYRREREGSDPVRDSSRSPYHKERGRTDHAISPSHSPEERGR
TSPQNGRGSSHSPRDTEKISPENGHGSGSPDEKGNASPYNGYGRSPNTVP
DARDSPNYGGPESPMHERYRSQSPPADE
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mRNA from alignment at Chr2:41147155..41151101-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Va02G065260.1_Jingnong6 ID=Va02G065260.1_Jingnong6; Name=Va02G065260.1; organism=Vigna angularis; type=mRNA; length=3947bp; location=Sequence derived from: Chr2:41147155..41151101- (Vigna angularis
GAAAAATTGATTCTATATATAGGTATTTTCCTGAGATCCGCATCTTTGTC
TTGGTCAACCCAAAAAATATCTGTTACTCTCTGCTCTGCTTAGGGTTCCA
GCCCAATACTTATCTTTCTCATGCAAGGTGATCCATTGTTTTCCGATTCA
TTCGATTCCATCTCCAATTTTCATGTTTCCTCTGGGTTTCTCACTCAAGG
TTATTTCTTTGCTTTCTTTCAACTTTTAGGAAAAACCAAGATCTGAGATC
TGGAACCCAAATTCAAGTTCTCGATCCACTGTTACACTCTGTTCTTTGAG
ATTTTTTGCCAGCCAATCGAGTTTGAATCCTTTCTGTTCTACAAAGTAAG
TTTTAATTTTTTTTTCTGCTACTTTGTATGCCCATTTTCTCTCCATTAAT
TAAATTTAATCCCTTTGTATTTTCTTTTTTAGATTTTAGATGTATTAGCC
TATATTTAAAATTTTCGGAAGGTCAGATTGTATGTGTCTAAATATTCATA
AGTTGTCTTTTTATTATTCACGTGGTTTAGTGATGGATGTGGTGGTGTTG
AAAGTTCTAATGTATGTATAGGTTCATTATTCCCTTGTATACATTGCAGC
ATAACAATATTATATTATACTTGTAATTTTTGTATGTTTTTTATTATTTA
TGCTTATTCATGTTTGTACATGGTGACTTCAAGTGTTTTTTTAACCTGCG
TTCAGGGAAGATGAAGCCTATTTTCTGTGGAAACTTTGAATATGATGCCC
GGCAGTCAGAGTTGGAGCGGCTTTTTAGACGATATGGGAAGGTTGACAGG
GTGGATATGAAGTCTGGTAAGTTTTTTCTTTTTTAGTTCTCTTTTGTATA
TGTTAGGGTGGACGAGTTATTAGTTTCCATTTTTTTCTTCTTTTTTTTTC
TCTCGTTGGGATTGAGTGGGGATTATCCTGGATTCAATATTTGAGGTTAA
ACACGAACTTTTAGATGTAAATTACTTATATGGTTTACAATGAATCGTCA
AGCTTATATATAACATAAAATCTTGAAAGTTTTAAAGACGGATTTTCTTT
GAGCAGATTGTAATTGTAGACATTGACTTTATTGTGTGATAGCTATTTAT
TTTTCGTGAGTTTTAGATTTGATTGTGGCGTCGTGTGGTTGGGAACTGTG
TACTGAATTAATAACTATATGTTTTTTCAATTCAATTATTAAATGTAAAT
TGTGTTATATTTATATATTCTCCAGAGAAATTCAAACTCAGGAAGAGTAA
TTTGGTCTAGAATGAAAACTGTCCTGTTAACTGGTAGTAAATTTTTACAA
TAACCAATTGGTTGATTTATAATTCAAACGTTTAACTTGTCAAATGGAGA
AGTATCTCAATCATTGTCAACCTTAACATTAAGTTCAAGAGGGGAGTAAG
TAAACATCCGCAAGTTGCACGTTTGCAATCCGACCTATAAGACACTCAGC
AGCATGGGAGCAGCACTTTTGACAACCCGTGGTTCAGACACTACATGGTG
TCTTGCTGGTGATTCTGTTTCAGGAGTTGGACCTTGGTGTACAGCTTCTG
GTTGAGCATTTGTGGGGGATCAAGATATTTTTAAGTAAAAAAATCATCTT
TTTTGGTAGCATCGACCCCCATACTCAACGTTTTCTTTGACGCAGGATTA
TCTTGGCATATCCATTTTCTCCCAAGCTAATGGATGGGCTTGTCCGAAAT
CCATTTCCTGCCTGTGATGCACATCTTCTTTTAATGAAGAATTGTTCAAT
TTGATCCGCAATGACACACCTGTTCCACGTATTCATCAGTCACATTTGCC
TTTCAATTTTTGTGCCTTTGCCCAGCCCTCTTTTGGACATGTTTCGAGGT
TGAAATATTGCCAACCTCACAGGAGAGGCAGCAGAATGGATGGAGAAGGC
ACTCATTTTCCATTGACCCTCATGAGACATACACTTTTGGGTTCTTGTTC
TTGACATCAATTTGTTTACTTATCAAGGTCTGTTGCTAATTCTATTGGTC
AAATTAGTTTATAAAATAAGGAGGTTTGCCAAAATTTTTATTTCCGAGCA
GTGTTGATTGTGCATGGCAGAAAGGCCCGTTATCACATCAGACGTCAAGT
GTTTGTTGATTGGTGTAATGGACAGAAACGTCTCATTTCAGTTTTTTGAT
AAGTTTAATTTAGTACCTAAGTGAGAAAAGTTTACATGATCTGTAGGATT
TGCTTTTATCTATATGGAAGATGAAAGAGATGCTGAGGCTGCTATTCGTG
CTCTTGATCGAATTGAATTTGGTCGTAAGGGACGAAGACTCCGTGTGGAA
TGGACAAAGGTAACACATAATTAGTCTCTTTGGGTTAAAGTGTTGTTTTG
ATCCATTATGTTTTCATGACCGACTCACATACTGTGTTGCAGCATGAACG
TGGTGTTAGAAGGCCATCTAGTTCAAGAAGATCTTCAGCTAATGGGAGGC
CATCAAAGACCTTGTTTGTAATTAATTTTGATACATACCATACCAGAACA
AGGGACTTAGAGAGGCACTTTGAACCGTATGGTAAGATAGTCAGTGTTAG
GATCAGAAGGAATTTTGCTTTTGTTCAGTATGAATCGGAGGATGATGCTA
GCAGAGCACTGGAAGCTACAAATATGAGGTAATTTAATGTAATTGGATAT
TTATTTTGGTAAAATCATTTTTGTTGCAGAATTCTTCTTTCAAATCTGTC
ATTAGCCTCTAGTGAATGCATGATTACTGTCAAGAGATTTGACATTTTTG
CTCGGTCTTTCTGTATATCTGTATACTTTAGCAAGTTTTAGTTTAACGAA
TAAATGATGTTTATCGTGTTAATTTTAACTTCCCAATATATTTGATAATT
GGCTTGTTACCATTGTTATTAACAGTTTTTTTTAAACAGTAAGTTACTGG
ATCGAGTAATTTCAGTTGAATTTGCTGTAAAAGATGATGATGATAGGAGA
AATGGATATAGCCCTGAGAGAGGCCGTGATCGTCAGCGTGATAGAAGCCG
TGATGGAAGAAGATCCCTTAGTCCTTATAGGAGAGAAAGAGGTAGTCCTG
ATTACGGTCGTGGGCCCAGTCCATATCAGAGAGAGAGGGGAAGTCCTGAC
TATGGCCGTGACCGAAGCCGTAGCAGAAGCCCCCCTAGAAGGGAGCCAGC
TAGCCCTGCATATGGACGTAGAAGCCCCAGTCCATATAGAAGAGAAAGGG
AGGGTTCTGATCCTGTTAGGGACTCCAGCCGCAGTCCTTATCACAAAGAG
CGAGGGAGAACTGACCATGCCATTTCTCCTTCTCATAGTCCTGAAGAAAG
AGGGAGAACAAGTCCTCAAAATGGTCGTGGTTCTAGCCATAGTCCTCGTG
ATACTGAGAAGATTAGCCCTGAAAATGGACATGGCTCTGGAAGTCCCGAT
GAAAAAGGGAATGCCAGCCCTTACAATGGTTATGGAAGGAGCCCAAATAC
CGTGCCTGATGCTAGGGACAGTCCTAACTACGGTGGTCCTGAAAGTCCGA
TGCATGAAAGATATCGCAGGTTTGCAAACTTATTTGTTTGAGAGTTTGTT
ATTACTGCTTATTTTCTCCTGTCTCTCTAGTTTGTTATCTTCATCGTTTT
AAATGTGTTCAATTTTTATAATACAGCCAGTCTCCCCCTGCGGACGAATG
ATTTCAGTAGCTGATGGAAGGGCAAACTGATTGTAGTTCCTTTTCATGGG
TGGACTAAATTTAATTTCAGCAAATTATTTTAGTGCAGTAGTGATAAAGC
TCTGAAACTTGTGTTGTTGTGACAACTTCCTAGTTCTTTATTTATTTGGT
TAGTTTAATATTTCTATATCAACTTAGTATTGTAGAATCTTTGTTTACAG
TTAAAAAATGGTACTATATCTTTGATCGACAACATCGGCTATAATCCTTG
TGTGTCCTTCAAGCATTTCAAAATAATTGACTGTGCTATTCCTTGTA
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Coding sequence (CDS) from alignment at Chr2:41147155..41151101-

>Va02G065260.1_Jingnong6 ID=Va02G065260.1_Jingnong6; Name=Va02G065260.1; organism=Vigna angularis; type=CDS; length=987bp; location=Sequence derived from: Chr2:41147155..41151101- (Vigna angularis
ATGGAAGATGAAAGAGATGCTGAGGCTGCTATTCGTGCTCTTGATCGAAT
TGAATTTGGTCGTAAGGGACGAAGACTCCGTGTGGAATGGACAAAGCATG
AACGTGGTGTTAGAAGGCCATCTAGTTCAAGAAGATCTTCAGCTAATGGG
AGGCCATCAAAGACCTTGTTTGTAATTAATTTTGATACATACCATACCAG
AACAAGGGACTTAGAGAGGCACTTTGAACCGTATGGTAAGATAGTCAGTG
TTAGGATCAGAAGGAATTTTGCTTTTGTTCAGTATGAATCGGAGGATGAT
GCTAGCAGAGCACTGGAAGCTACAAATATGAGTAAGTTACTGGATCGAGT
AATTTCAGTTGAATTTGCTGTAAAAGATGATGATGATAGGAGAAATGGAT
ATAGCCCTGAGAGAGGCCGTGATCGTCAGCGTGATAGAAGCCGTGATGGA
AGAAGATCCCTTAGTCCTTATAGGAGAGAAAGAGGTAGTCCTGATTACGG
TCGTGGGCCCAGTCCATATCAGAGAGAGAGGGGAAGTCCTGACTATGGCC
GTGACCGAAGCCGTAGCAGAAGCCCCCCTAGAAGGGAGCCAGCTAGCCCT
GCATATGGACGTAGAAGCCCCAGTCCATATAGAAGAGAAAGGGAGGGTTC
TGATCCTGTTAGGGACTCCAGCCGCAGTCCTTATCACAAAGAGCGAGGGA
GAACTGACCATGCCATTTCTCCTTCTCATAGTCCTGAAGAAAGAGGGAGA
ACAAGTCCTCAAAATGGTCGTGGTTCTAGCCATAGTCCTCGTGATACTGA
GAAGATTAGCCCTGAAAATGGACATGGCTCTGGAAGTCCCGATGAAAAAG
GGAATGCCAGCCCTTACAATGGTTATGGAAGGAGCCCAAATACCGTGCCT
GATGCTAGGGACAGTCCTAACTACGGTGGTCCTGAAAGTCCGATGCATGA
AAGATATCGCAGCCAGTCTCCCCCTGCGGACGAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding