Va01G002640.1

Transcript Overview
NameVa01G002640.1
Unique NameVa01G002640.1_Jingnong6
TypemRNA
OrganismVigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length330
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr1chromosomeChr1:1801826..1802272 -Vigna angularis cv. Jingnong6 genome v1.7.1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjavjL005Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjavjL111Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjavjR185Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjavjR189Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccR0338Cajanus cajan Asha genome v1.0Cajanus cajan
avjccR0434Cajanus cajan Asha genome v1.0Cajanus cajan
avjccR0451Cajanus cajan Asha genome v1.0Cajanus cajan
avjpsR215Pisum sativum Cameor genome v1aPisum sativum
avjpsR299Pisum sativum Cameor genome v1aPisum sativum
avjpsR306Pisum sativum Cameor genome v1aPisum sativum
avjpsR315Pisum sativum Cameor genome v1aPisum sativum
avjpvR247Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjvfhR262Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvfhR272Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjpvR305Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
avjvfhR320Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvfhR336Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
avjvrvR163Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvrvR189Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvrvR210Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvrvR224Vigna radiata cv. VC1973A genome v6.0Vigna radiata
avjvuR198Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvssR259Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvuR220Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvssR271Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvuR230Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
avjvssR292Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvssR304Vicia sativa cv. Studenica genome v1.0Vicia sativa
avjvumR168Vigna umbellata FF25 genome v1.0Vigna umbellata
avjccaR218Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjccaR259Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjvumR188Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvumR209Vigna umbellata FF25 genome v1.0Vigna umbellata
avjccaR301Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjvumR228Vigna umbellata FF25 genome v1.0Vigna umbellata
avjccaR306Cajanus cajan cv. Asha genome v2.0Cajanus cajan
avjvumR275Vigna umbellata FF25 genome v1.0Vigna umbellata
avjvvaR296Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvvaR316Vicia villosa cv. AU Merit genome v1.0Vicia villosa
avjvasR170Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvstR175Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvasR196Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvasR215Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvasR259Vigna angularis cv. Shumari genome v1.a1Vigna angularis
avjvstR204Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvstR221Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvstR267Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvstR282Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
avjvunR160Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjpvfR229Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR245Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjvunR181Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
avjpvfR287Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR298Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
avjpvfR336Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Va01G002640Va01G002640_Jingnong6Vigna angularisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va01G002640.1:exon_1_Jingnong6Va01G002640.1:exon_1_Jingnong6Vigna angularisexon
Va01G002640.1:exon_2_Jingnong6Va01G002640.1:exon_2_Jingnong6Vigna angularisexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Va01G002640.1_Jingnong6-cdsVa01G002640.1_Jingnong6-cds-Chr1_Jingnong6:1801826..1802085Vigna angularisCDS
Va01G002640.1_Jingnong6-cdsVa01G002640.1_Jingnong6-cds-Chr1_Jingnong6:1802203..1802272Vigna angularisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Va01G002640.1_Jingnong6Va01G002640.1_Jingnong6Vigna angularispolypeptide
Va01G002640.1_Jingnong6Va01G002640.1_Jingnong6-proteinVigna angularispolypeptide


Homology
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9VSQ4|A0A0L9VSQ4_PHAAN (Response regulatory domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g082700 PE=4 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 9.080e-75
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEADDILHKKE 109
            MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEADDILHKKE
Sbjct:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEADDILHKKE 109
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UKV4|A0A1S3UKV4_VIGRR (Two-component response regulator ARR14-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106766448 PE=4 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.696e-45
Identity = 74/109 (67.89%), Postives = 89/109 (81.65%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEADDILHKKE 109
            MPMMDGYEF QFL KE IDIPF  MS D++S SMTKA  LGAC+YL+KPFD+DYWLNLWS MFKHHI+L R KK+IDSL+D++ISE S++S F    E EA++ LHKK+
Sbjct:   73 MPMMDGYEFLQFLSKEEIDIPFAXMSEDFSSISMTKAFDLGACDYLKKPFDDDYWLNLWSPMFKHHIFLRRNKKNIDSLDDDKISEKSNNSXF----EVEANNTLHKKD 177
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3QWL0|A0A0S3QWL0_PHAAN (Response regulatory domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G014400 PE=4 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.613e-36
Identity = 72/118 (61.02%), Postives = 85/118 (72.03%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKP-------FDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETS-DSSEFASDMEAEA-DDILHKKE 109
            MPMMDGYEF  FL KEVID+PF+MMS D T  S  KA +LGAC+Y  KP       F+N +   LWS MF+HH +  RI+K+IDSLED+EISETS +SSEF+SD E EA DD  HKKE
Sbjct:   73 MPMMDGYEFLHFLDKEVIDVPFIMMSEDRTVLSQEKAFKLGACDYWVKPLFEYKFLFENKH---LWSPMFRHHFHYRRIRKNIDSLEDDEISETSYNSSEFSSDGEVEADDDSPHKKE 187
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9T8H0|A0A0L9T8H0_PHAAN (Two-component response regulator OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0017670 PE=4 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.613e-36
Identity = 72/118 (61.02%), Postives = 85/118 (72.03%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKP-------FDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETS-DSSEFASDMEAEA-DDILHKKE 109
            MPMMDGYEF  FL KEVID+PF+MMS D T  S  KA +LGAC+Y  KP       F+N +   LWS MF+HH +  RI+K+IDSLED+EISETS +SSEF+SD E EA DD  HKKE
Sbjct:   73 MPMMDGYEFLHFLDKEVIDVPFIMMSEDRTVLSQEKAFKLGACDYWVKPLFEYKFLFENKH---LWSPMFRHHFHYRRIRKNIDSLEDDEISETSYNSSEFSSDGEVEADDDSPHKKE 187
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0LIH6|A0A8T0LIH6_PHAAN (Two-component response regulator OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0010680 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.992e-31
Identity = 68/113 (60.18%), Postives = 75/113 (66.37%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFA----SDMEAEADDILHKKE 109
            MPMMDGYEF QFL KE IDIPFVMMS D T FSMTKA  LGA  Y  KPF+ND  L+LW+ + +H  Y  R+ K  D        ETSD SEFA    SD EAEADD LHKK+
Sbjct:   73 MPMMDGYEFLQFLNKEEIDIPFVMMSEDSTWFSMTKAFHLGAIYYFLKPFNNDKRLDLWAPLLRH--YYDRLNKKDD--------ETSDGSEFASDGESDGEAEADDTLHKKD 175
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UIM7|A0A1S3UIM7_VIGRR (Two-component response regulator ARR2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765699 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.014e-31
Identity = 65/114 (57.02%), Postives = 79/114 (69.30%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWL----NLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEA-DDILHKKE 109
            MP MDG+ F +FL KEVID+PF+MMS D +  S  KAL LGACNY  KPF    +L     L S M +HH++  RI+K+IDSLED+EISETS    ++SD EAEA DD  HKKE
Sbjct:   73 MPKMDGFGFLRFLNKEVIDVPFIMMSEDNSDLSQQKALTLGACNYWVKPFLQYTYLFERKRLCSPMMRHHVHFRRIRKNIDSLEDDEISETS----YSSDGEAEANDDSPHKKE 182
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TE94|A0A0L9TE94_PHAAN (Response regulatory domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan564s001600 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.244e-31
Identity = 68/113 (60.18%), Postives = 79/113 (69.91%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDM----EAEADDILHKKE 109
            MPMMDGYEF QFL KE IDIPFVMMS D T FSM+KA  LGA +Y  KPF+ND  L+LW+ + KH+ Y  R      +L+D+   ETSD SEFASD     EAEADD LHKK+
Sbjct:   58 MPMMDGYEFLQFLNKEEIDIPFVMMSEDSTWFSMSKAFHLGAIHYFLKPFNNDKRLDLWAPLLKHY-YDRR------NLKDD---ETSDGSEFASDRESDGEAEADDTLHKKD 160
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3QWS2|A0A0S3QWS2_PHAAN (Response regulatory domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G019000 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.258e-30
Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWL----NLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEA-DDILHKKE 109
            MP+MDG+ F +FLKKEVID+PF+MMS D T  S  KA +LGAC+Y  KPF    +L    +L S M +HH +  RI+K IDSLED+EIS+TS +SEF+S+ EAEA DD  H+KE
Sbjct:   73 MPIMDGFGFLRFLKKEVIDVPFIMMSEDDTDLSHKKAFKLGACDYWVKPFLEYAFLFERKHLCSPMMRHHFHFRRIRK-IDSLEDDEISDTSYNSEFSSEGEAEADDDTPHEKE 185
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9T894|A0A0L9T894_PHAAN (Putative two-component response regulator OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0017360 PE=4 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.258e-30
Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWL----NLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEA-DDILHKKE 109
            MP+MDG+ F +FLKKEVID+PF+MMS D T  S  KA +LGAC+Y  KPF    +L    +L S M +HH +  RI+K IDSLED+EIS+TS +SEF+S+ EAEA DD  H+KE
Sbjct:   73 MPIMDGFGFLRFLKKEVIDVPFIMMSEDDTDLSHKKAFKLGACDYWVKPFLEYAFLFERKHLCSPMMRHHFHFRRIRK-IDSLEDDEISDTSYNSEFSSEGEAEADDDTPHEKE 185
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3QWP0|A0A0S3QWP0_PHAAN (Response regulatory domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G020200 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.683e-27
Identity = 57/115 (49.57%), Postives = 72/115 (62.61%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYW-----LNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAEA-DDILHKKE 109
            MP++DGYEF + L  E ID+PF+MMS D T  S  KA +LGAC+Y  KPF  +Y       NLWS M +HH Y  RI  +IDSL+ +E  +    + + SD EAEA DD  HKKE
Sbjct:   71 MPLIDGYEFLEILDDEAIDVPFIMMSEDCTPLSQEKAFRLGACDYWIKPFFFEYESLFENRNLWSPMIRHHFYFRRIGINIDSLKGDEKGDEKGETGYNSDGEAEADDDTPHKKE 185
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/Swiss-Prot
Match: Two-component (response regulator ORR26 OS=Oryza sativa subsp. japonica OX=39947 GN=RR26 PE=3 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 2.531e-9
Identity = 28/88 (31.82%), Postives = 51/88 (57.95%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETS 88
            MP MDG++  + +  E +D+P +MMS+D  +  + K +Q GAC+YL KP       N+W  +++  ++ ++  +  DS +D +I   S
Sbjct:   65 MPDMDGFKLLEHIGLE-MDLPVIMMSIDGETSRVMKGVQHGACDYLLKPVRMKELRNIWQHVYRKKMHEVKEIEGNDSCDDLQILRNS 151
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/Swiss-Prot
Match: Two-component (response regulator ARR14 OS=Arabidopsis thaliana OX=3702 GN=ARR14 PE=1 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 2.978e-9
Identity = 28/85 (32.94%), Postives = 47/85 (55.29%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEIS 85
            MP M+GY   Q +    +D+P +MMSVD  + ++   +  GAC+YL KP   +   N+W  + +    + +  +S  +LEDN+ S
Sbjct:   66 MPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNS 150
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/Swiss-Prot
Match: Two-component (response regulator ORR21 OS=Oryza sativa subsp. japonica OX=39947 GN=RR21 PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 2.866e-8
Identity = 30/103 (29.13%), Postives = 55/103 (53.40%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISE-TSDSSEFASDMEAEAD 102
            MP MDG+   + +  E +D+P +MMS D  +  + K ++ GAC+YL KP   +   N+W  + +      +  +   SL+D + +  T++ +E+AS     A+
Sbjct:   71 MPDMDGFRLLELVGLE-MDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAE 172
[Close]
BLAST of Va01G002640.1 vs. UniProtKB/Swiss-Prot
Match: Two-component (response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN=RR21 PE=3 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 2.866e-8
Identity = 30/103 (29.13%), Postives = 55/103 (53.40%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISE-TSDSSEFASDMEAEAD 102
            MP MDG+   + +  E +D+P +MMS D  +  + K ++ GAC+YL KP   +   N+W  + +      +  +   SL+D + +  T++ +E+AS     A+
Sbjct:   71 MPDMDGFRLLELVGLE-MDLPVIMMSADSRTDIVMKGIKHGACDYLIKPVRMEELKNIWQHVIRKKFNENKEHEHSGSLDDTDRTRPTNNDNEYASSANDGAE 172
[Close]
BLAST of Va01G002640.1 vs. Araport11
Match: | (Symbols: RR14, ARR14 | response regulator 14 | chr2:333320-334514 FORWARD LENGTH=317)

HSP 1 Score: 59.6918 bits (143), Expect = 1.456e-11
Identity = 28/87 (32.18%), Postives = 48/87 (55.17%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISET 87
            MP M+GY   Q +    +D+P +MMSVD  + ++   +  GAC+YL KP   +   N+W  + +    + +  +S  +LEDN+ S +
Sbjct:    1 MPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNSGS 87
[Close]
BLAST of Va01G002640.1 vs. Araport11
Match: | (Symbols: RR14, ARR14 | response regulator 14 | chr2:333041-334514 FORWARD LENGTH=382)

HSP 1 Score: 56.225 bits (134), Expect = 3.012e-10
Identity = 28/85 (32.94%), Postives = 47/85 (55.29%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEIS 85
            MP M+GY   Q +    +D+P +MMSVD  + ++   +  GAC+YL KP   +   N+W  + +    + +  +S  +LEDN+ S
Sbjct:   66 MPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNS 150
[Close]
BLAST of Va01G002640.1 vs. Araport11
Match: | (Symbols: RR14, ARR14 | response regulator 14 | chr2:333041-334514 FORWARD LENGTH=410)

HSP 1 Score: 55.8398 bits (133), Expect = 3.715e-10
Identity = 28/85 (32.94%), Postives = 47/85 (55.29%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEIS 85
            MP M+GY   Q +    +D+P +MMSVD  + ++   +  GAC+YL KP   +   N+W  + +    + +  +S  +LEDN+ S
Sbjct:   94 MPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALEDNKNS 178
[Close]
BLAST of Va01G002640.1 vs. Araport11
Match: | (Symbols: ARR11 | response regulator 11 | chr1:25376994-25378905 REVERSE LENGTH=521)

HSP 1 Score: 48.521 bits (114), Expect = 1.188e-7
Identity = 24/71 (33.80%), Postives = 40/71 (56.34%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMR 71
            MP MDG++  + +  E +D+P +MMSVD  +  + K +Q GAC+YL KP        +W  + +  +  +R
Sbjct:   66 MPDMDGFKLLEHVGLE-LDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVR 135
[Close]
BLAST of Va01G002640.1 vs. Araport11
Match: | (Symbols: ARR11 | response regulator 11 | chr1:25376994-25378629 REVERSE LENGTH=456)

HSP 1 Score: 48.521 bits (114), Expect = 1.491e-7
Identity = 24/71 (33.80%), Postives = 40/71 (56.34%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMR 71
            MP MDG++  + +  E +D+P +MMSVD  +  + K +Q GAC+YL KP        +W  + +  +  +R
Sbjct:    1 MPDMDGFKLLEHVGLE-LDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVR 70
[Close]
BLAST of Va01G002640.1 vs. Araport11
Match: | (Symbols: PRR1, AtTOC1, TOC1, APRR1 | TIMING OF CAB EXPRESSION 1, PSEUDO-RESPONSE REGULATOR 1 | chr5:24675540-24678176 FORWARD LENGTH=618)

HSP 1 Score: 47.3654 bits (111), Expect = 3.455e-7
Identity = 30/106 (28.30%), Postives = 59/106 (55.66%), Query Frame = 0 
Query:    1 MPMMDGYEFQQFLK--KEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPFDNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEI-SETSDSSEFASDMEAEADD 103
            +PM  G +  +++   K++  IP +MMS       + K L+LGA +YL KP   +  LNLW+ M++    L   +K++ S + + + S+ SD +  ++++ ++  D
Sbjct:   74 LPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNMLSYDFDLVGSDQSDPNTNSTNLFSDDTD 179
The following BLAST results are available for this feature:
BLAST of Va01G002640.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0L9VSQ4|A0A0L9VSQ4_PHAAN9.080e-75100.00Response regulatory domain-containing protein OS=P... [more]
tr|A0A1S3UKV4|A0A1S3UKV4_VIGRR2.696e-4567.89Two-component response regulator ARR14-like OS=Vig... [more]
tr|A0A0S3QWL0|A0A0S3QWL0_PHAAN9.613e-3661.02Response regulatory domain-containing protein OS=V... [more]
tr|A0A0L9T8H0|A0A0L9T8H0_PHAAN9.613e-3661.02Two-component response regulator OS=Phaseolus angu... [more]
tr|A0A8T0LIH6|A0A8T0LIH6_PHAAN1.992e-3160.18Two-component response regulator OS=Phaseolus angu... [more]
tr|A0A1S3UIM7|A0A1S3UIM7_VIGRR2.014e-3157.02Two-component response regulator ARR2 OS=Vigna rad... [more]
tr|A0A0L9TE94|A0A0L9TE94_PHAAN6.244e-3160.18Response regulatory domain-containing protein OS=P... [more]
tr|A0A0S3QWS2|A0A0S3QWS2_PHAAN1.258e-3057.02Response regulatory domain-containing protein OS=V... [more]
tr|A0A0L9T894|A0A0L9T894_PHAAN1.258e-3057.02Putative two-component response regulator OS=Phase... [more]
tr|A0A0S3QWP0|A0A0S3QWP0_PHAAN7.683e-2749.57Response regulatory domain-containing protein OS=V... [more]
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BLAST of Va01G002640.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
Two-component2.531e-931.82response regulator ORR26 OS=Oryza sativa subsp. ja... [more]
Two-component2.978e-932.94response regulator ARR14 OS=Arabidopsis thaliana O... [more]
Two-component2.866e-829.13response regulator ORR21 OS=Oryza sativa subsp. ja... [more]
Two-component2.866e-829.13response regulator ORR21 OS=Oryza sativa subsp. in... [more]
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BLAST of Va01G002640.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 6
Match NameE-valueIdentityDescription
|1.456e-1132.18Symbols: RR14, ARR14 | response regulator 14 | chr... [more]
|3.012e-1032.94Symbols: RR14, ARR14 | response regulator 14 | chr... [more]
|3.715e-1032.94Symbols: RR14, ARR14 | response regulator 14 | chr... [more]
|1.188e-733.80Symbols: ARR11 | response regulator 11 | chr1:2537... [more]
|1.491e-733.80Symbols: ARR11 | response regulator 11 | chr1:2537... [more]
|3.455e-728.30Symbols: PRR1, AtTOC1, TOC1, APRR1 | TIMING OF CAB... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.2300coord: 1..108
e-value: 4.3E-11
score: 45.1
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 1..53
e-value: 7.1E-5
score: 34.3
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 1..63
score: 17.687538
IPR045279Two-component response regulator ARR-likePANTHERPTHR43874TWO-COMPONENT RESPONSE REGULATORcoord: 1..88
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 1..79

Sequences
The following sequences are available for this feature:

mRNA sequence

>Va01G002640.1_Jingnong6 ID=Va01G002640.1_Jingnong6; Name=Va01G002640.1; organism=Vigna angularis; type=mRNA; length=330bp
ATGCCAATGATGGATGGCTATGAATTCCAGCAATTTCTCAAGAAAGAAGT
AATTGATATTCCTTTCGTCATGATGTCTGTGGATTATACTTCGTTTTCCA
TGACCAAGGCTCTCCAACTTGGAGCTTGCAATTATTTACAGAAACCCTTC
GATAATGACTATTGGTTAAATTTGTGGTCAGCTATGTTCAAGCATCATAT
ATACCTGATGCGCATAAAGAAAAGTATTGATAGCTTGGAAGATAATGAGA
TAAGTGAGACAAGTGATAGTTCTGAATTTGCTTCTGATATGGAAGCCGAA
GCCGATGATATCCTCCACAAAAAAGAATAG
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protein sequence of Va01G002640.1_Jingnong6

>Va01G002640.1_Jingnong6 ID=Va01G002640.1_Jingnong6; Name=Va01G002640.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=109bp
MPMMDGYEFQQFLKKEVIDIPFVMMSVDYTSFSMTKALQLGACNYLQKPF
DNDYWLNLWSAMFKHHIYLMRIKKSIDSLEDNEISETSDSSEFASDMEAE
ADDILHKKE
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mRNA from alignment at Chr1:1801826..1802272-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Va01G002640.1_Jingnong6 ID=Va01G002640.1_Jingnong6; Name=Va01G002640.1; organism=Vigna angularis; type=mRNA; length=447bp; location=Sequence derived from: Chr1:1801826..1802272- (Vigna angularis
ATGCCAATGATGGATGGCTATGAATTCCAGCAATTTCTCAAGAAAGAAGT
AATTGATATTCCTTTCGTCAGTAAGTAACTAGTCTTTTACATTTGTACTC
GCGTTTTCAACTTTTGACTGTTTAACGTAACTAATCTTTTACATTTTTAC
TCAAGTTTTTAACTTTTGACTGATTAACCATCTGCAGTGATGTCTGTGGA
TTATACTTCGTTTTCCATGACCAAGGCTCTCCAACTTGGAGCTTGCAATT
ATTTACAGAAACCCTTCGATAATGACTATTGGTTAAATTTGTGGTCAGCT
ATGTTCAAGCATCATATATACCTGATGCGCATAAAGAAAAGTATTGATAG
CTTGGAAGATAATGAGATAAGTGAGACAAGTGATAGTTCTGAATTTGCTT
CTGATATGGAAGCCGAAGCCGATGATATCCTCCACAAAAAAGAATAG
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Coding sequence (CDS) from alignment at Chr1:1801826..1802272-

>Va01G002640.1_Jingnong6 ID=Va01G002640.1_Jingnong6; Name=Va01G002640.1; organism=Vigna angularis; type=CDS; length=330bp; location=Sequence derived from: Chr1:1801826..1802272- (Vigna angularis
ATGCCAATGATGGATGGCTATGAATTCCAGCAATTTCTCAAGAAAGAAGT
AATTGATATTCCTTTCGTCATGATGTCTGTGGATTATACTTCGTTTTCCA
TGACCAAGGCTCTCCAACTTGGAGCTTGCAATTATTTACAGAAACCCTTC
GATAATGACTATTGGTTAAATTTGTGGTCAGCTATGTTCAAGCATCATAT
ATACCTGATGCGCATAAAGAAAAGTATTGATAGCTTGGAAGATAATGAGA
TAAGTGAGACAAGTGATAGTTCTGAATTTGCTTCTGATATGGAAGCCGAA
GCCGATGATATCCTCCACAAAAAAGAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001789Sig_transdc_resp-reg_receiver
IPR045279ARR-like
IPR011006CheY-like_superfamily
Vocabulary: Biological Process
TermDefinition
GO:0000160phosphorelay signal transduction system
GO:0009736cytokinin-activated signaling pathway