Va01G087620.3

Transcript Overview


Name	Va01G087620.3
Unique Name	Va01G087620.3_Jingnong6
Type	mRNA
Organism	Vigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length	849

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr1	chromosome	Chr1:57366185..57369864 +	Vigna angularis cv. Jingnong6 genome v1.7.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna angularis cv. Jingnong6 genome v1.7.1	2024-05-08
InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11	2024-05-23

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
avjavjR174	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjavjR177	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anavjL0032	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anavjL0034	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjavjR215	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjcanR236	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
anavjL0231	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjcaR273	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjcanR258	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjcaR298	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
anavjL0345	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anavjL0390	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anavjL0392	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjccR0445	Cajanus cajan Asha genome v1.0	Cajanus cajan
avjccR0449	Cajanus cajan Asha genome v1.0	Cajanus cajan
anavjL0789	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjpsR241	Pisum sativum Cameor genome v1a	Pisum sativum
avjpsR289	Pisum sativum Cameor genome v1a	Pisum sativum
avjpsR295	Pisum sativum Cameor genome v1a	Pisum sativum
avjpvR230	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjvfhR269	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjpvR292	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjvfhR306	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjpvR334	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjpvR340	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjvrvR162	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
avjvrvR192	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
avjvrvR233	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
avjvuR177	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvuR209	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvssR279	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvssR286	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvuR259	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvuR262	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvssR318	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvssR346	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjcarR220		Cicer arietinum
avjcarR249		Cicer arietinum
avjcarR280		Cicer arietinum
avjccaR231	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvumR172	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjccaR254	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjccaR255	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvumR187	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjvumR219	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjvumR224	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjvvaR224	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvvaR284	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvasR170	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvasR206	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvasR210	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvstR180	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvasR274	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvstR213	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvstR215	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvstR281	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvunR148	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjpvfR230	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjvunR169	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjvunR212	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjvunR215	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjpvfR280	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjpvfR326	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjpvfR329	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
Psat4g042200.1	Pisum sativum Cameor genome v1a	Pisum sativum
Vigun03g350700.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
Vigun03g350700.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Vigst.01G302400.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
Vfaba.Hedin2.R1.4g171920.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Vum_01G03286.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Ca_06628	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Phvul.003G159900.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
rna-XM_014649964.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
jg19373.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
PvulFLAVERTChr03.1000949	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
XM_058904751.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
Cc_v2.0_27285.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
rna-XM_004508495.1	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
rna-KK1_001902	Cajanus cajan Asha genome v1.0	Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vigan.01G440700.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Va01G087620	Va01G087620_Jingnong6	Vigna angularis	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va01G087620.3:five_prime_UTR_1_Jingnong6	Va01G087620.3:five_prime_UTR_1_Jingnong6	Vigna angularis	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va01G087620.3:exon_1_Jingnong6	Va01G087620.3:exon_1_Jingnong6	Vigna angularis	exon
Va01G087620.3:exon_2_Jingnong6	Va01G087620.3:exon_2_Jingnong6	Vigna angularis	exon
Va01G087620.3:exon_3_Jingnong6	Va01G087620.3:exon_3_Jingnong6	Vigna angularis	exon
Va01G087620.3:exon_4_Jingnong6	Va01G087620.3:exon_4_Jingnong6	Vigna angularis	exon
Va01G087620.3:exon_5_Jingnong6	Va01G087620.3:exon_5_Jingnong6	Vigna angularis	exon
Va01G087620.3:exon_6_Jingnong6	Va01G087620.3:exon_6_Jingnong6	Vigna angularis	exon
Va01G087620.3:exon_7_Jingnong6	Va01G087620.3:exon_7_Jingnong6	Vigna angularis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va01G087620.3_Jingnong6-cds	Va01G087620.3_Jingnong6-cds-Chr1_Jingnong6:57366330..57366341	Vigna angularis	CDS
Va01G087620.3_Jingnong6-cds	Va01G087620.3_Jingnong6-cds-Chr1_Jingnong6:57366465..57366937	Vigna angularis	CDS
Va01G087620.3_Jingnong6-cds	Va01G087620.3_Jingnong6-cds-Chr1_Jingnong6:57367048..57367114	Vigna angularis	CDS
Va01G087620.3_Jingnong6-cds	Va01G087620.3_Jingnong6-cds-Chr1_Jingnong6:57367603..57367671	Vigna angularis	CDS
Va01G087620.3_Jingnong6-cds	Va01G087620.3_Jingnong6-cds-Chr1_Jingnong6:57367751..57367816	Vigna angularis	CDS
Va01G087620.3_Jingnong6-cds	Va01G087620.3_Jingnong6-cds-Chr1_Jingnong6:57367922..57367990	Vigna angularis	CDS
Va01G087620.3_Jingnong6-cds	Va01G087620.3_Jingnong6-cds-Chr1_Jingnong6:57369384..57369476	Vigna angularis	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va01G087620.3:three_prime_UTR_1_Jingnong6	Va01G087620.3:three_prime_UTR_1_Jingnong6	Vigna angularis	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Va01G087620.3_Jingnong6	Va01G087620.3_Jingnong6	Vigna angularis	polypeptide
Va01G087620.3_Jingnong6	Va01G087620.3_Jingnong6-protein	Vigna angularis	polypeptide

Homology

[Close]

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3R722|A0A0S3R722_PHAAN (RRM domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G440700 PE=4 SV=1)

HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0
Identity = 282/300 (94.00%), Postives = 282/300 (94.00%), Query Frame = 0

Query:    1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
            MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ                  VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR
Sbjct:   67 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQVEAQLESSTKQLDQLKKEVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 366

[Close]

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0LAN4|A0A8T0LAN4_PHAAN (Glycine-rich RNA-binding protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0027100 PE=4 SV=1)

HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0
Identity = 282/300 (94.00%), Postives = 282/300 (94.00%), Query Frame = 0

Query:    1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
            MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ                  VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR
Sbjct:   67 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQVEAQLESSTKQLDQLKKEVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 366

[Close]

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A1S3UHE4|A0A1S3UHE4_VIGRR (Zinc finger CCCH domain-containing protein 25 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765376 PE=4 SV=1)

HSP 1 Score: 532.332 bits (1370), Expect = 0.000e+0
Identity = 272/300 (90.67%), Postives = 279/300 (93.00%), Query Frame = 0

Query:    1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
            MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNR+NDWSRDRDRSRDRDQDRDRRFEH+HDYDEDRDPMLDNDWGREDDRVEN+QEHSRGDGGDVDRDHNLDFNADRKTDR+SD DRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ                  VS MEEGLEEKRVHVKELQKQSKKLEDAL+NAKKNTSYRQMQLIKLHKCFLQVKDYTERLK+SEKELQALID+VLLEIDGDGVG KDGQLTNGSLDAR
Sbjct:   67 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRNNDWSRDRDRSRDRDQDRDRRFEHMHDYDEDRDPMLDNDWGREDDRVENDQEHSRGDGGDVDRDHNLDFNADRKTDRSSDPDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQVEAQLESSTKQFDQLKKEVSQMEEGLEEKRVHVKELQKQSKKLEDALVNAKKNTSYRQMQLIKLHKCFLQVKDYTERLKTSEKELQALIDSVLLEIDGDGVGFKDGQLTNGSLDAR 366

[Close]

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A4D6KRM1|A0A4D6KRM1_VIGUN (RRM domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1028 PE=4 SV=1)

HSP 1 Score: 526.168 bits (1354), Expect = 0.000e+0
Identity = 274/302 (90.73%), Postives = 277/302 (91.72%), Query Frame = 0

Query:    1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRD--QDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
            MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRD  QDRDRRFEH+HDYDEDRDPMLDNDW REDDRVENEQEHSRGDGGD DRDHNLDFNADRKTDRTSD DRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGA DDQ                  VS MEEGLEEKRVHVKELQKQSKKLEDALI+AKKNTSYRQMQLIKLHKCFLQVKDYTERLK+SEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR
Sbjct:   67 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDRDQDRDRRFEHMHDYDEDRDPMLDNDWSREDDRVENEQEHSRGDGGDEDRDHNLDFNADRKTDRTSDPDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGARDDQVEAQIESSTKQLDQLKKEVSQMEEGLEEKRVHVKELQKQSKKLEDALISAKKNTSYRQMQLIKLHKCFLQVKDYTERLKTSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 368

[Close]

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9TSF5|A0A0L9TSF5_PHAAN (RRM domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g264000 PE=4 SV=1)

HSP 1 Score: 489.96 bits (1260), Expect = 1.094e-172
Identity = 252/271 (92.99%), Postives = 252/271 (92.99%), Query Frame = 0

Query:    1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQA 253
            MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ                  VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQ 
Sbjct:   67 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQVEAQLESSTKQLDQLKKEVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQV 337

[Close]

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A371EVI4|A0A371EVI4_MUCPR (Cold-inducible RNA-binding protein B (Fragment) OS=Mucuna pruriens OX=157652 GN=cirbp-b PE=4 SV=1)

HSP 1 Score: 421.779 bits (1083), Expect = 7.845e-145
Identity = 240/304 (78.95%), Postives = 263/304 (86.51%), Query Frame = 0

Query:    1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNS----GRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
            MNGRTIDGRVVKVNGVR+RGGR+NFGRERYYYHNDERNGDWDRGRDR+R YDHDN+     RDGYRNRS+DWSRDRDRSRD DQDRDRRFEH+HDY++ R+PMLDNDW REDDRVENE+EHSRG GGDV+RDHNLD + +RK DRTSD D+SFDEDRKDQSRRNNDLNVTNQHSMDLSS+STG  +DQ                  VS MEEGLEEKR+HVKELQKQSKKLEDALINAKKN+SYRQMQL+KLHKCFLQVKD+TERLK+ EKELQALIDT + EIDGD  GLKDGQLTNG+LD R
Sbjct:   91 MNGRTIDGRVVKVNGVRARGGRTNFGRERYYYHNDERNGDWDRGRDRERIYDHDNNDRDGYRDGYRNRSSDWSRDRDRSRDHDQDRDRRFEHMHDYEQAREPMLDNDWSREDDRVENEKEHSRGYGGDVERDHNLDLDTNRKVDRTSDPDKSFDEDRKDQSRRNNDLNVTNQHSMDLSSDSTGTHNDQVEAQLERSTQQLDQLKKEVSQMEEGLEEKRLHVKELQKQSKKLEDALINAKKNSSYRQMQLMKLHKCFLQVKDFTERLKTGEKELQALIDTAMSEIDGD--GLKDGQLTNGNLDGR 392

[Close]

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445G5N2|A0A445G5N2_GLYSO (Cold-inducible RNA-binding protein B isoform A OS=Glycine soja OX=3848 GN=D0Y65_045591 PE=4 SV=1)

HSP 1 Score: 405.216 bits (1040), Expect = 1.026e-138
Identity = 224/300 (74.67%), Postives = 248/300 (82.67%), Query Frame = 0

Query:    1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
            MNGRTIDGRV+KVNGVR+RGGRSNFGRERYYY NDER GDWD GRDR+RDYDHDN+ RDGYRNRS+DW+RD D+SRDRDQDRDRRFEHIHDYD+ RD MLDN W  E+DR+ENEQEHSRG   DVDR+H++D N  RK DRTSD DRSFDED+KDQSRRNNDLNV+NQHSMDLSS+S G  +DQ                  VS MEEGLEEKR+HVKELQKQSKKLEDALINAKKN+SY QMQL+KLHKCFLQV D TE L+++EKELQALI T + EIDGD   LKD QLTNGSLD R
Sbjct:   67 MNGRTIDGRVIKVNGVRARGGRSNFGRERYYYQNDERKGDWDCGRDRERDYDHDNNDRDGYRNRSSDWTRDCDKSRDRDQDRDRRFEHIHDYDQARDAMLDNVWNPEEDRIENEQEHSRGHDRDVDREHSIDLNIVRKMDRTSDPDRSFDEDKKDQSRRNNDLNVSNQHSMDLSSDSAGTHNDQVEAQLERSTQQLDQLKKEVSQMEEGLEEKRLHVKELQKQSKKLEDALINAKKNSSYHQMQLMKLHKCFLQVNDCTEGLRTTEKELQALIVTAMSEIDGD--ELKDRQLTNGSLDGR 364

[Close]

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|I1MUC9|I1MUC9_SOYBN (RRM domain-containing protein OS=Glycine max OX=3847 GN=100797556 PE=4 SV=1)

HSP 1 Score: 405.216 bits (1040), Expect = 1.026e-138
Identity = 224/300 (74.67%), Postives = 248/300 (82.67%), Query Frame = 0

Query:    1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQ------------------VSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
            MNGRTIDGRV+KVNGVR+RGGRSNFGRERYYY NDER GDWD GRDR+RDYDHDN+ RDGYRNRS+DW+RD D+SRDRDQDRDRRFEHIHDYD+ RD MLDN W  E+DR+ENEQEHSRG   DVDR+H++D N  RK DRTSD DRSFDED+KDQSRRNNDLNV+NQHSMDLSS+S G  +DQ                  VS MEEGLEEKR+HVKELQKQSKKLEDALINAKKN+SY QMQL+KLHKCFLQV D TE L+++EKELQALI T + EIDGD   LKD QLTNGSLD R
Sbjct:   67 MNGRTIDGRVIKVNGVRARGGRSNFGRERYYYQNDERKGDWDCGRDRERDYDHDNNDRDGYRNRSSDWTRDCDKSRDRDQDRDRRFEHIHDYDQARDAMLDNVWNPEEDRIENEQEHSRGHDRDVDREHSIDLNIVRKMDRTSDPDRSFDEDKKDQSRRNNDLNVSNQHSMDLSSDSAGTHNDQVEAQLERSTQQLDQLKKEVSQMEEGLEEKRLHVKELQKQSKKLEDALINAKKNSSYHQMQLMKLHKCFLQVNDCTEGLRTTEKELQALIVTAMSEIDGD--ELKDRQLTNGSLDGR 364

[Close]

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|A0A445G5N7|A0A445G5N7_GLYSO (Cold-inducible RNA-binding protein B isoform B OS=Glycine soja OX=3848 GN=D0Y65_045591 PE=4 SV=1)

HSP 1 Score: 403.29 bits (1035), Expect = 7.647e-138
Identity = 224/305 (73.44%), Postives = 248/305 (81.31%), Query Frame = 0

Query:    1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDD-----------------------QVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
            MNGRTIDGRV+KVNGVR+RGGRSNFGRERYYY NDER GDWD GRDR+RDYDHDN+ RDGYRNRS+DW+RD D+SRDRDQDRDRRFEHIHDYD+ RD MLDN W  E+DR+ENEQEHSRG   DVDR+H++D N  RK DRTSD DRSFDED+KDQSRRNNDLNV+NQHSMDLSS+S G  +D                       QVS MEEGLEEKR+HVKELQKQSKKLEDALINAKKN+SY QMQL+KLHKCFLQV D TE L+++EKELQALI T + EIDGD   LKD QLTNGSLD R
Sbjct:   67 MNGRTIDGRVIKVNGVRARGGRSNFGRERYYYQNDERKGDWDCGRDRERDYDHDNNDRDGYRNRSSDWTRDCDKSRDRDQDRDRRFEHIHDYDQARDAMLDNVWNPEEDRIENEQEHSRGHDRDVDREHSIDLNIVRKMDRTSDPDRSFDEDKKDQSRRNNDLNVSNQHSMDLSSDSAGTHNDQVEAQLERSTQQLDQLKKEFLTCQVSQMEEGLEEKRLHVKELQKQSKKLEDALINAKKNSSYHQMQLMKLHKCFLQVNDCTEGLRTTEKELQALIVTAMSEIDGD--ELKDRQLTNGSLDGR 369

[Close]

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Match: tr|I1K1C6|I1K1C6_SOYBN (RRM domain-containing protein OS=Glycine max OX=3847 GN=100816804 PE=4 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 1.435e-137
Identity = 238/282 (84.40%), Postives = 257/282 (91.13%), Query Frame = 0

Query:    1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR 282
            MNGRTIDGRVVKVNGVR+RGGRSNFGRERYYYHNDERNGDWDR RDRDRDYDHD++ RDGYRNRS+DW RDRDRSRDRDQDRDRRFEH+HDYD+ R+ ML+NDW REDDRVENEQEHSRG GGDVDRDHN+D N DRK DRTSD DRSF EDRKDQSRRNNDLNVTNQH MDLSS+S G  ++QVS MEEGLEEKR+HVKELQKQSKKLEDA+INAKKN+SYRQMQL+KLHK FLQVKD TE+LK+SEKELQALIDT + EID D  GLKDGQLTNGSLD R
Sbjct:   67 MNGRTIDGRVVKVNGVRTRGGRSNFGRERYYYHNDERNGDWDRSRDRDRDYDHDSNDRDGYRNRSSDWGRDRDRSRDRDQDRDRRFEHMHDYDQAREAMLENDWIREDDRVENEQEHSRGHGGDVDRDHNIDLNVDRKMDRTSDPDRSFGEDRKDQSRRNNDLNVTNQHIMDLSSDSAGTHNEQVSQMEEGLEEKRLHVKELQKQSKKLEDAVINAKKNSSYRQMQLMKLHKGFLQVKDCTEKLKTSEKELQALIDTAMSEIDCD--GLKDGQLTNGSLDGR 346

[Close]

BLAST of Va01G087620.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:6744029-6746133 FORWARD LENGTH=337)

HSP 1 Score: 115.931 bits (289), Expect = 4.991e-30
Identity = 102/298 (34.23%), Postives = 151/298 (50.67%), Query Frame = 0

Query:    1 MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQD-----RDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTG----------------ADDDQVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNG 277
            M+G++I GR V+VN V +RGGR N G  R   H     G WDR  DR  D +++       R+R +D SR+RDRS+DR +D     ++R +EH HD++   D  + +  G ++   + ++   RGD   VD    ++               S  E R  +++R +   +      D  S S+G                A  D+V +MEE LE K V   ELQK+SK+LED LIN KK  S R+ +L KLHK + +V++ T+ LK  E+ELQ L+++   E    GV   D  L +G
Sbjct:   67 MDGKSIGGRAVRVNDVTTRGGRMNPGPGRLQPH-----GGWDRSPDRRSDGNYE-------RDRYSDRSRERDRSQDRRKDHRYIEKERAYEHSHDFERRNDHDMVDRNGYKERVFDGDEGDWRGDRSYVDNGRGINGT-------------SAHEGRSQETKREDSTILDGGRGRDHFSNSSGDHQVKEDLEALIKMREALRDEVMVMEERLEVKEVVCSELQKKSKRLEDLLINEKKLVSQRRKELAKLHKSYSRVRECTDNLKDCEQELQLLVNSAARE----GVAGADEGLGHG 335

[Close]

BLAST of Va01G087620.3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:6744626-6746133 FORWARD LENGTH=249)

HSP 1 Score: 90.1225 bits (222), Expect = 4.376e-21
Identity = 85/261 (32.57%), Postives = 130/261 (49.81%), Query Frame = 0

Query:   38 NGDWDRGRDRDRDYDHDNSGRDGYRNRSNDWSRDRDRSRDRDQD-----RDRRFEHIHDYDEDRDPMLDNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFDEDRKDQSRRNNDLNVTNQHSMDLSSESTG----------------ADDDQVSLMEEGLEEKRVHVKELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKELQALIDTVLLEIDGDGVGLKDGQLTNG 277
            +G WDR  DR  D +++       R+R +D SR+RDRS+DR +D     ++R +EH HD++   D  + +  G ++   + ++   RGD   VD    ++               S  E R  +++R +   +      D  S S+G                A  D+V +MEE LE K V   ELQK+SK+LED LIN KK  S R+ +L KLHK + +V++ T+ LK  E+ELQ L+++   E    GV   D  L +G
Sbjct:   11 HGGWDRSPDRRSDGNYE-------RDRYSDRSRERDRSQDRRKDHRYIEKERAYEHSHDFERRNDHDMVDRNGYKERVFDGDEGDWRGDRSYVDNGRGINGT-------------SAHEGRSQETKREDSTILDGGRGRDHFSNSSGDHQVKEDLEALIKMREALRDEVMVMEERLEVKEVVCSELQKKSKRLEDLLINEKKLVSQRRKELAKLHKSYSRVRECTDNLKDCEQELQLLVNSAARE----GVAGADEGLGHG 247

The following BLAST results are available for this feature:

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
BLAST of Va01G087620.3 vs. Araport11

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A0S3R722\|A0A0S3R722_PHAAN	0.000e+0	94.00	RRM domain-containing protein OS=Vigna angularis v...	[more]
tr\|A0A8T0LAN4\|A0A8T0LAN4_PHAAN	0.000e+0	94.00	Glycine-rich RNA-binding protein OS=Phaseolus angu...	[more]
tr\|A0A1S3UHE4\|A0A1S3UHE4_VIGRR	0.000e+0	90.67	Zinc finger CCCH domain-containing protein 25 isof...	[more]
tr\|A0A4D6KRM1\|A0A4D6KRM1_VIGUN	0.000e+0	90.73	RRM domain-containing protein OS=Vigna unguiculata...	[more]
tr\|A0A0L9TSF5\|A0A0L9TSF5_PHAAN	1.094e-172	92.99	RRM domain-containing protein OS=Phaseolus angular...	[more]
tr\|A0A371EVI4\|A0A371EVI4_MUCPR	7.845e-145	78.95	Cold-inducible RNA-binding protein B (Fragment) OS...	[more]
tr\|A0A445G5N2\|A0A445G5N2_GLYSO	1.026e-138	74.67	Cold-inducible RNA-binding protein B isoform A OS=...	[more]
tr\|I1MUC9\|I1MUC9_SOYBN	1.026e-138	74.67	RRM domain-containing protein OS=Glycine max OX=38...	[more]
tr\|A0A445G5N7\|A0A445G5N7_GLYSO	7.647e-138	73.44	Cold-inducible RNA-binding protein B isoform B OS=...	[more]
tr\|I1K1C6\|I1K1C6_SOYBN	1.435e-137	84.40	RRM domain-containing protein OS=Glycine max OX=38...	[more]

BLAST of Va01G087620.3 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Va01G087620.3 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 2


Match Name	E-value	Identity	Description
\|	4.991e-30	34.23	Symbols: no symbol available \| no full name availa...	[more]
\|	4.376e-21	32.57	Symbols: no symbol available \| no full name availa...	[more]

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr1:57366185..57369864+
coding sequence from alignment at Chr1:57366185..57369864+

mRNA sequence

>Va01G087620.3_Jingnong6 ID=Va01G087620.3_Jingnong6; Name=Va01G087620.3; organism=Vigna angularis; type=mRNA; length=849bp
ATGAATGGCAGAACCATTGACGGGCGTGTGGTTAAAGTTAATGGGGTGAG
GTCTCGTGGGGGCAGGTCAAACTTTGGCAGAGAACGGTATTACTATCATA
ATGATGAGAGGAATGGAGATTGGGATCGTGGGAGAGATCGAGACCGAGAT
TATGATCATGATAATAGTGGTAGGGATGGATACAGGAATCGGAGCAATGA
TTGGAGTCGGGACCGTGATAGGTCTCGAGACCGAGACCAGGACAGGGATA
GAAGATTTGAGCATATACATGACTATGATGAAGATAGAGATCCTATGTTA
GATAATGACTGGGGTAGAGAGGATGATAGAGTTGAAAATGAACAAGAACA
TAGCAGGGGGGATGGTGGAGATGTGGATAGAGACCACAACTTGGATTTTA
ATGCAGACAGGAAAACGGATAGGACAAGTGACCTTGATAGAAGTTTTGAT
GAGGATAGAAAAGATCAGTCAAGGAGAAACAATGACTTGAATGTTACAAA
TCAACATAGCATGGATCTTTCATCAGAATCAACTGGTGCTGACGATGATC
AGGTTTCTCTAATGGAAGAGGGATTGGAAGAGAAAAGGGTCCATGTTAAG
GAATTGCAAAAGCAATCTAAGAAACTGGAGGATGCACTGATCAATGCAAA
GAAAAACACTTCATATCGTCAGATGCAGTTGATAAAGCTTCATAAATGTT
TTCTGCAAGTGAAAGATTACACAGAAAGACTTAAATCTAGTGAAAAGGAA
CTTCAGGCTCTAATTGATACAGTACTGTTAGAGATTGATGGTGATGGCGT
TGGATTAAAGGATGGACAACTAACAAATGGAAGTCTTGATGCTAGATAG

protein sequence of Va01G087620.3_Jingnong6

>Va01G087620.3_Jingnong6 ID=Va01G087620.3_Jingnong6; Name=Va01G087620.3_Jingnong6; organism=Vigna angularis; type=polypeptide; length=282bp
MNGRTIDGRVVKVNGVRSRGGRSNFGRERYYYHNDERNGDWDRGRDRDRD
YDHDNSGRDGYRNRSNDWSRDRDRSRDRDQDRDRRFEHIHDYDEDRDPML
DNDWGREDDRVENEQEHSRGDGGDVDRDHNLDFNADRKTDRTSDLDRSFD
EDRKDQSRRNNDLNVTNQHSMDLSSESTGADDDQVSLMEEGLEEKRVHVK
ELQKQSKKLEDALINAKKNTSYRQMQLIKLHKCFLQVKDYTERLKSSEKE
LQALIDTVLLEIDGDGVGLKDGQLTNGSLDAR

mRNA from alignment at Chr1:57366185..57369864+

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Va01G087620.3_Jingnong6 ID=Va01G087620.3_Jingnong6; Name=Va01G087620.3; organism=Vigna angularis; type=mRNA; length=3680bp; location=Sequence derived from: Chr1:57366185..57369864+ (Vigna angularis
CAAATAATCAATTCCACCCATCGGGGTTTTGTTTCAATCGCTAATTTTTT
TATGCCAGATTATCAACGACCAACGCGGTAGGGGGAAGTGCTATTGTTTT
GTTACTTTCACGAATCCTAGGTCAGCGATCGACGCCATCAACGACATGAA
TGGCAGAGTATGTAATTTAATCATTTATCCTCTTTTACATGTTTTAGGGT
CTTTAATATCTGGTTATGAATTATTATTGTCGTGCTTAGCTTGGGTTTTA
GGCATTTGACTCTCTGTTGTTCCGAATCAGACCATTGACGGGCGTGTGGT
TAAAGTTAATGGGGTGAGGTCTCGTGGGGGCAGGTCAAACTTTGGCAGAG
AACGGTATTACTATCATAATGATGAGAGGAATGGAGATTGGGATCGTGGG
AGAGATCGAGACCGAGATTATGATCATGATAATAGTGGTAGGGATGGATA
CAGGAATCGGAGCAATGATTGGAGTCGGGACCGTGATAGGTCTCGAGACC
GAGACCAGGACAGGGATAGAAGATTTGAGCATATACATGACTATGATGAA
GATAGAGATCCTATGTTAGATAATGACTGGGGTAGAGAGGATGATAGAGT
TGAAAATGAACAAGAACATAGCAGGGGGGATGGTGGAGATGTGGATAGAG
ACCACAACTTGGATTTTAATGCAGACAGGAAAACGGATAGGACAAGTGAC
CTTGATAGAAGTTTTGATGAGGATAGAAAAGATCAGTCAAGGAGAAACAA
TGAGTAAGATTTCCATCCATTTTTCTTGACATATGTTTATTTCCAACCAT
TTTTCTTCAGTTTACTTTTGTTACATGCATAATCTACTGGACTTATTAGT
GCTTTTCCTGCAGCTTGAATGTTACAAATCAACATAGCATGGATCTTTCA
TCAGAATCAACTGGTGCTGACGATGATCAGGTAATGCAAATGCCTTTAAA
TTTCTGAAATGTGAGGAATTCTGAATTTCTTGTCTAGGTTGCATATTGGC
ATACAATAAATTGTAGTTGATTGTGGTGCACTTTTTTTGTTTGTGTGATT
TCAGGTAGAAGCTCAATTAGAGAGCTCAACTAAGCAGCTTGATCAACTCA
AAAAAGAGGTTTGTAATCTCTTTAGAGCAAACATGAATGAATGATTACAA
TTTGTTAAATGGTCAAGTCTATGCTAGCAAGCAGCTTTATGGTAGTGTGA
CAAATGTTTTCTTCTAACTGAACAATTGCATTTTTGGGGTGTGCATACAA
ATGCATACGAAGACTTCCCTGAATTCCAATGTTTACTAAATACCAAGTTG
GCATATCACTTCCTTCAGAAGTCTTCCAATTCCGGATAACAAGTCCTCCA
GCCCTTTGTGTTATTTTTATTTCTGCTGTTTGTTGATGACGTGGAAAGTG
GAATTTTTGGCTTATCAGGTTTCTCTAATGGAAGAGGGATTGGAAGAGAA
AAGGGTCCATGTTAAGGAATTGCAAAAGCAATCTAAGGTATCTGTTTGCT
ATACTCTTTTGATTGTCCTTACTTTGAACAAAAAATCTATTCTGACCTGG
AAAATATTTACTGCAGAAACTGGAGGATGCACTGATCAATGCAAAGAAAA
ACACTTCATATCGTCAGATGCAGTTGATAAAGGTAGTATCTAGTTGTCAT
AATTATAAATCAAATACTTGCAGTCTCTATACTATTGCCAAATTCATGCA
CTGCTGCTAACATTGAATTTGGGCAATTGATCTTCAGCTTCATAAATGTT
TTCTGCAAGTGAAAGATTACACAGAAAGACTTAAATCTAGTGAAAAGGAA
CTTCAGGTTTGAGCCTTAACACCACATAATTCCGATTTATGTACAGATCT
GCAAAGTATGTTCTGTGTTTTTAAAAAATGATTAAATTATACATTGTGAT
TTTGGATACTGCTTTTTTCAATTTCACATGATTTTGTGCATTATGTGTAT
TGAATTTTATGTGGAATTGTGACAAATGCTCCCTTTATAAACTATTTTTT
CAAATTGTTGTGTTTCCTTGAATTTTGTTTGTCAACATAGAAGCATTATA
TAGTATAATTTGTATAGAAGACGAGTCTCATGACTTGTTTTTTCTGTTGC
CCCATTTATCTCTATATGTTATTTTGTCTTTGAGCCTATCATTAGAACTT
GGGTATTGTAGGAGTGCCCAAGTCTCACTCAAGTAAGTACCCTTTTCGAG
GCACTAACAGCTAGTTTTGCTACCAGTTGATAAGCATTCAAACACTTGTG
GACCCACCCTCAAAAGCTATTCAGTGAGGGGAAATAACCGAACACTGAAA
TATTGCATTGTGCACCCATACTTCTCCAATTTGAGACTCAGGCACTCCGT
AATATCCAAGTTCCTAGCAAACAATTTCTATCTTTTCTAAATTATTAAAT
TGGGGCCAAAAGACATGGATTTTATTTTGACGTAAGAAATTTTAGTAATG
CAAGTTAGAGATGTACAAATGTAAAGGAAAAGAGTATGCCGCAGAGGAAT
GGAATATACAAGAAACGTCAACTAAAGCTATTGTCACAGATAGTCATGCT
CCATAATAGTACCCGAAGTGAAGGGTGAAATGTGTTTTTATTCATGTGAA
TATGCTAAATTTGGTTTTAGACATCCAATACTTTTGATTAGTTTTGATCC
TCATCCATTTAATTTTTGGCAATTGGTCCCTTTTAATACGTAGTGGTGAT
TACATATGTCTATACATGTCACGTCATAATGGTCATTTACATGGCTCGTG
TAGATGCATGTTATGCACTAAACAAGAGATGGATATTTAAAATATAAATA
AATTTGTGAGGGCCAAAACCCAAAAAAAAACTTTTTTTACTAAAATCATA
TTTAACAATATTTGCAGGAATAAAAAATATGTTTATGTCCAAAAAGACAA
AAAGAACTATGCAATAAAATACCCTGGCAAACCTTTTTTTGGAGAAATAA
AGGAGATGTATGAAATAGACCTGTTGAGATTTGAAAGATCTCTGATGTTT
GTTCATCATTATTGATATGAAATTATGAACGTTGTTTGATGTTTGGAGTT
GTCTTATAAATTTGTGAGCTCTATTTGAGTTCAGTTGTTCCTATTACTCC
AGTAGCTTTGTTTCCTTTCTTCTCTATCTCCACGTCCAAATGGATGAGAT
GAAGTCGTAATAGTAGCACGACTGAGTGTTTTCTTTTTGGGACTTGCAGG
CTCTAATTGATACAGTACTGTTAGAGATTGATGGTGATGGCGTTGGATTA
AAGGATGGACAACTAACAAATGGAAGTCTTGATGCTAGATAGTAATTCTA
TATTTGGAAATTTCAGATTGTGTCGCTGATGCTTAAAATGGGTTTAGCAC
ACATAATACCTTGTCTGATATGAAGAAAAAATGGCTGGATAAGTCAATGA
ATCTCTTTTATTTTTCTTTTTCTGATTCAACAACTCTAGCTTTTACTAAA
TAGCATCAATAGAGTTTTGCTTATACTGTTTAGTTGTTGGTTAACTTGGT
CATAATTATGGATTCACCTGTTATAAATTCACAAGATAAACAAATTGCAT
GTGGTGTACCTTTTGGACTTGTTGTATTAGGTCAGAGAATTCAGTGTTAT
CTTTTGTTCATTGTCATCTCTATTTAACCTAATGTCTGATCCTTTCTGTC
CTCATATGAATAATCCCTTTTTAGTAGAAA

Coding sequence (CDS) from alignment at Chr1:57366185..57369864+

>Va01G087620.3_Jingnong6 ID=Va01G087620.3_Jingnong6; Name=Va01G087620.3; organism=Vigna angularis; type=CDS; length=849bp; location=Sequence derived from: Chr1:57366185..57369864+ (Vigna angularis
ATGAATGGCAGAACCATTGACGGGCGTGTGGTTAAAGTTAATGGGGTGAG
GTCTCGTGGGGGCAGGTCAAACTTTGGCAGAGAACGGTATTACTATCATA
ATGATGAGAGGAATGGAGATTGGGATCGTGGGAGAGATCGAGACCGAGAT
TATGATCATGATAATAGTGGTAGGGATGGATACAGGAATCGGAGCAATGA
TTGGAGTCGGGACCGTGATAGGTCTCGAGACCGAGACCAGGACAGGGATA
GAAGATTTGAGCATATACATGACTATGATGAAGATAGAGATCCTATGTTA
GATAATGACTGGGGTAGAGAGGATGATAGAGTTGAAAATGAACAAGAACA
TAGCAGGGGGGATGGTGGAGATGTGGATAGAGACCACAACTTGGATTTTA
ATGCAGACAGGAAAACGGATAGGACAAGTGACCTTGATAGAAGTTTTGAT
GAGGATAGAAAAGATCAGTCAAGGAGAAACAATGACTTGAATGTTACAAA
TCAACATAGCATGGATCTTTCATCAGAATCAACTGGTGCTGACGATGATC
AGGTTTCTCTAATGGAAGAGGGATTGGAAGAGAAAAGGGTCCATGTTAAG
GAATTGCAAAAGCAATCTAAGAAACTGGAGGATGCACTGATCAATGCAAA
GAAAAACACTTCATATCGTCAGATGCAGTTGATAAAGCTTCATAAATGTT
TTCTGCAAGTGAAAGATTACACAGAAAGACTTAAATCTAGTGAAAAGGAA
CTTCAGGCTCTAATTGATACAGTACTGTTAGAGATTGATGGTGATGGCGT
TGGATTAAAGGATGGACAACTAACAAATGGAAGTCTTGATGCTAGATAG

Search form