Va04G053650.1

Transcript Overview


Name	Va04G053650.1
Unique Name	Va04G053650.1_Jingnong6
Type	mRNA
Organism	Vigna angularis (Adzuki bean, red mung bean, azuki)
Sequence length	345

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr4	chromosome	Chr4:33481274..33483234 -	Vigna angularis cv. Jingnong6 genome v1.7.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna angularis cv. Jingnong6 genome v1.7.1	2024-05-08
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL	2024-05-23
InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot	2024-05-23
Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11	2024-05-23

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
avjavjR296	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjcanR478	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjcanR492	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjcanR497	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjcaR540	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjcaR554	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjcaR559	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
avjpsR555	Pisum sativum Cameor genome v1a	Pisum sativum
avjpsR591	Pisum sativum Cameor genome v1a	Pisum sativum
avjpvR556	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjvfhR587	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjvfhR618	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
avjpvR638	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjpvR648	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
avjvrvR464	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
avjvuR466	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvuR478	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvuR484	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
avjvssR602	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvssR620	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvssR633	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvssR637	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjcarR518		Cicer arietinum
avjcarR531		Cicer arietinum
avjcarR537		Cicer arietinum
avjccaR528	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvumR494	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjccaR535	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
avjvumR505	Vigna umbellata FF25 genome v1.0	Vigna umbellata
avjvvaR566	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvvaR612	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvvaR626	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvasR471	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvasR473	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvasR482	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
avjvstR502	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvstR513	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
avjvunR393	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjvunR405	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjvunR411	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
avjpvfR552	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjpvfR643	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
avjpvfR650	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vigan.02G143000.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Va04G053650	Va04G053650_Jingnong6	Vigna angularis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va04G053650.1:exon_1_Jingnong6	Va04G053650.1:exon_1_Jingnong6	Vigna angularis	exon
Va04G053650.1:exon_2_Jingnong6	Va04G053650.1:exon_2_Jingnong6	Vigna angularis	exon
Va04G053650.1:exon_3_Jingnong6	Va04G053650.1:exon_3_Jingnong6	Vigna angularis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Va04G053650.1_Jingnong6-cds	Va04G053650.1_Jingnong6-cds-Chr4_Jingnong6:33481274..33481403	Vigna angularis	CDS
Va04G053650.1_Jingnong6-cds	Va04G053650.1_Jingnong6-cds-Chr4_Jingnong6:33482647..33482726	Vigna angularis	CDS
Va04G053650.1_Jingnong6-cds	Va04G053650.1_Jingnong6-cds-Chr4_Jingnong6:33483100..33483234	Vigna angularis	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Va04G053650.1_Jingnong6	Va04G053650.1_Jingnong6	Vigna angularis	polypeptide
Va04G053650.1_Jingnong6	Va04G053650.1_Jingnong6-protein	Vigna angularis	polypeptide

Homology

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9UKI9|A0A0L9UKI9_PHAAN (CTP synthase N-terminal domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g081000 PE=4 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.478e-75
Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 0

Query:    1 MNAIFTVFIFVLIFPSFADPYLNTDAGTMSPFEHAEVFVLDDSGEFVIEKERRGDYGRGEVKLGQPWGSLLSVAAEPNLKESTARKKIYDRCDETVSGRHLKYASSKEKEKT 112
            MNAIFTVFIFVLIFPSFADPYLNTDAGTMSPFEHAE F+LDDSGEFVIEKERRGDYGRGEVKLGQPWGSLLSVAAEPNLKESTARKKIYDRCDETVSGRHLKYASSKEKEK 
Sbjct:    1 MNAIFTVFIFVLIFPSFADPYLNTDAGTMSPFEHAEGFILDDSGEFVIEKERRGDYGRGEVKLGQPWGSLLSVAAEPNLKESTARKKIYDRCDETVSGRHLKYASSKEKEKN 112

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3SIP5|A0A0S3SIP5_PHAAN (CTP synthase N-terminal domain-containing protein (Fragment) OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G143100 PE=4 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 4.569e-45
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0

Query:    1 MNAIFTVFIFVLIFPSFADPYLNTDAGTMSPFEHAEVFVLDDSGEFVIEKERRGDYGRGEVKLGQPWGSLL 71
            MNAIFTVFIFVLIFPSFADPYLNTDAGTMSPFEHAEVF+LDDSGEFVIEKERRGDYGRGEVKLGQPWGSLL
Sbjct:   12 MNAIFTVFIFVLIFPSFADPYLNTDAGTMSPFEHAEVFILDDSGEFVIEKERRGDYGRGEVKLGQPWGSLL 82

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RVM2|A0A0S3RVM2_PHAAN (CTP synthase N-terminal domain-containing protein (Fragment) OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G209200 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.885e-29
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEFVIEKERRGDYGRGEVKLGQPWGSLLSV 73
            DPYLNTDAGTMSPFEHAEV VL DSGEFVIEKERRGDYGRGEVKLGQPWGSLL +
Sbjct:   22 DPYLNTDAGTMSPFEHAEVLVLYDSGEFVIEKERRGDYGRGEVKLGQPWGSLLRL 76

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0JRQ6|A0A8T0JRQ6_PHAAN (CTP synthase (glutamine hydrolyzing) OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0202910 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.548e-24
Identity = 58/93 (62.37%), Postives = 60/93 (64.52%), Query Frame = 0

Query:   29 MSPFEHAEVFVLDDSGEFVIEKERRGDYGRGEV---------------KLGQPWGSLLS----------VAAEPNLKESTARKKIYDRCDETV 96
            MSPFEHAEVFVLDDSGEFVIEKERRGDYGRGE                 +    G + S          VAAEPNLKESTARKKIYDRCDETV
Sbjct:    1 MSPFEHAEVFVLDDSGEFVIEKERRGDYGRGEAIEDLTKALEFETNSADILHERGDIESMPFIEALLEPVAAEPNLKESTARKKIYDRCDETV 93

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0LDT2|A0A8T0LDT2_PHAAN (CTP synthase OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0008320 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.003e-24
Identity = 65/128 (50.78%), Postives = 68/128 (53.12%), Query Frame = 0

Query:   13 IFPSFADPYLNTDAGTMSPFEHAEVFVLDDSGEFVIEKERRGDY---------------------------GRGE-------VKLGQPWGSLLS----------VAAEPNLKESTARKKIYDRCDETV 96
            I     DPYLNTDAGTMSPFEH EVFVLDD GE VIEKERR DY                            R E       +KLG   G + S          VAAEPNLKESTARKKIYD+CDETV
Sbjct:   69 IIKGVLDPYLNTDAGTMSPFEHGEVFVLDDGGESVIEKERRRDYLGKTVQVVAHITDAIQEWIERVAKIPVDRKEGPADVCVIKLGGTIGDIESMPFIEALLEPVAAEPNLKESTARKKIYDKCDETV 196

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0S3RDQ8|A0A0S3RDQ8_PHAAN (CTP synthase N-terminal domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G143000 PE=4 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.159e-24
Identity = 50/64 (78.12%), Postives = 55/64 (85.94%), Query Frame = 0

Query:    1 MNAIFTVFIFVLIFPSFADPYLNTDAGTMSPFEHAEVFVLDDSGEFVIEKERRGDYGRG-EVKL 63
            MNAIFTVFIFVLIFPSFADPYLNTDAGTMSPFEHAEVFVLDDSGE  ++    G+Y R  ++KL
Sbjct:   12 MNAIFTVFIFVLIFPSFADPYLNTDAGTMSPFEHAEVFVLDDSGELELD---LGNYERFLDIKL 72

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/TrEMBL
Match: tr|A0A8T0KCL9|A0A8T0KCL9_PHAAN (CTP synthase OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0145030 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.816e-20
Identity = 41/42 (97.62%), Postives = 41/42 (97.62%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEFVIEKERRGDYGRGE 60
            DPYLN DAGTMSPFEHAEVFVLDDSGEFVIEKERRGDYGRGE
Sbjct:   62 DPYLNIDAGTMSPFEHAEVFVLDDSGEFVIEKERRGDYGRGE 103

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/TrEMBL
Match: tr|A0A0L9ULZ3|A0A0L9ULZ3_PHAAN (CTP synthase N-terminal domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g132600 PE=4 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.357e-18
Identity = 53/86 (61.63%), Postives = 56/86 (65.12%), Query Frame = 0

Query:   20 PYLNTDAGTMSPFEHAEVFVLDDSGE-----FVIEKERRGDY----GRGEVKLGQPWGSLLSVAAEPNLKESTARKKIYDRCDETV 96
            PYLNTDAGTMSPFEH EVFVLDD GE       +  +  G      G  +V L       L VAAEPNLKESTARKKIYDRCDETV
Sbjct:  602 PYLNTDAGTMSPFEHGEVFVLDDGGEGNPCDTYLCLDSVGTSACCSGASDVALHDT----LIVAAEPNLKESTARKKIYDRCDETV 683

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/TrEMBL
Match: tr|A0A1R3GTE1|A0A1R3GTE1_COCAP (CTP synthase OS=Corchorus capsularis OX=210143 GN=CCACVL1_23593 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.359e-16
Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 0

Query:   16 SFADPYLNTDAGTMSPFEHAEVFVLDDSGEFVIEKERRGDY 56
            SF+DPYLN+DAGTMSPFEH EVFVLDD GE+V++KERRGDY
Sbjct:   70 SFSDPYLNSDAGTMSPFEHGEVFVLDDGGEYVLDKERRGDY 110

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/TrEMBL
Match: tr|A0A835P7D4|A0A835P7D4_VANPL (CTP synthase N-terminal domain-containing protein OS=Vanilla planifolia OX=51239 GN=HPP92_027916 PE=4 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.743e-16
Identity = 35/38 (92.11%), Postives = 36/38 (94.74%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEFVIEKERRGDY 56
            DPYLNTDAGTMSPFEH EVFVLDD GEFVI+KERRGDY
Sbjct:   40 DPYLNTDAGTMSPFEHGEVFVLDDGGEFVIDKERRGDY 77

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/Swiss-Prot
Match: CTP (synthase OS=Dictyostelium discoideum OX=44689 GN=ctps PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 4.404e-10
Identity = 32/67 (47.76%), Postives = 33/67 (49.25%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGE-----------------------------FVIEKERRGDY 56
            DPYLN DAGTMSPFEH EVFVLDD GE                              VIEKER+G Y
Sbjct:   40 DPYLNIDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDVNLGKDNNITTGKIYNLVIEKERKGQY 106

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/Swiss-Prot
Match: CTP (synthase OS=Thermococcus onnurineus (strain NA1) OX=523850 GN=pyrG PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.272e-9
Identity = 31/67 (46.27%), Postives = 34/67 (50.75%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPYLN DAGTM+P++H EVFVLDD GE                              VIEKERRGDY
Sbjct:   41 DPYLNYDAGTMNPYQHGEVFVLDDGGEVDLDLGNYERFLDTSLTFDHNITTGKIYSAVIEKERRGDY 107

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/Swiss-Prot
Match: CTP (synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ura7 PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.405e-9
Identity = 30/67 (44.78%), Postives = 33/67 (49.25%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPY+N DAGTMSP EH EVFVL+D GE                              VI+KERRGDY
Sbjct:   40 DPYMNIDAGTMSPLEHGEVFVLNDGGEVDLDLGNYERYLNVTLTHDNNITTGKVYSNVIQKERRGDY 106

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/Swiss-Prot
Match: CTP (synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=pyrG PE=3 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 8.458e-9
Identity = 29/67 (43.28%), Postives = 34/67 (50.75%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPY+N DAGTM+P++H EVFVLDD GE                              VIEKERRG+Y
Sbjct:   41 DPYINYDAGTMNPYQHGEVFVLDDGGEVDLDLGNYERFLDTNLTFEHNITTGKVYSTVIEKERRGEY 107

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/Swiss-Prot
Match: CTP (synthase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=pyrG PE=3 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 8.878e-9
Identity = 29/67 (43.28%), Postives = 34/67 (50.75%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPY+N DAGTM+P++H EVFVLDD GE                              VIEKERRG+Y
Sbjct:   41 DPYINYDAGTMNPYQHGEVFVLDDGGEVDLDLGNYERFLDTELTFDHNITTGKVYSTVIEKERRGEY 107

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/Swiss-Prot
Match: CTP (synthase OS=Geotalea daltonii (strain DSM 22248 / JCM 15807 / FRC-32) OX=316067 GN=pyrG PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 9.969e-9
Identity = 31/74 (41.89%), Postives = 35/74 (47.30%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDYGRGEVKL 63
            DPY+N D GTMSPF+H EVFV DD  E                              VIEKERRGDY  G V++
Sbjct:   42 DPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERYTSARLSKKSNFTTGQVYFSVIEKERRGDYLGGTVQV 115

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/Swiss-Prot
Match: CTP (synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=272844 GN=pyrG PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.037e-8
Identity = 29/67 (43.28%), Postives = 34/67 (50.75%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPY+N DAGTM+P++H EVFVLDD GE                              VIEKERRG+Y
Sbjct:   41 DPYINYDAGTMNPYQHGEVFVLDDGGEVDLDLGNYERFLDTSLTFDHNITTGKVYSTVIEKERRGEY 107

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/Swiss-Prot
Match: CTP (synthase 1 (Fragment) OS=Cricetulus griseus OX=10029 GN=CTPS1 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.072e-8
Identity = 29/67 (43.28%), Postives = 33/67 (49.25%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGE-----------------------------FVIEKERRGDY 56
            DPY+N DAGT SP+EH EVFVLDD GE                             +VI KER+GDY
Sbjct:    1 DPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQYVINKERKGDY 67

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/Swiss-Prot
Match: CTP (synthase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=pyrG PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.154e-8
Identity = 31/74 (41.89%), Postives = 35/74 (47.30%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDYGRGEVKL 63
            DPY+N D GTMSPF+H EVFV DD  E                              VIEKERRGDY  G V++
Sbjct:   42 DPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERYTSARLSKRSNFTTGQVYFSVIEKERRGDYLGGTVQV 115

[Close]

BLAST of Va04G053650.1 vs. UniProtKB/Swiss-Prot
Match: CTP (synthase 1 OS=Mus musculus OX=10090 GN=Ctps1 PE=1 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 1.178e-8
Identity = 29/67 (43.28%), Postives = 33/67 (49.25%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGE-----------------------------FVIEKERRGDY 56
            DPY+N DAGT SP+EH EVFVLDD GE                             +VI KER+GDY
Sbjct:   40 DPYINIDAGTFSPYEHGEVFVLDDGGEVDLDLGNYERFLDIRLTKDNNLTTGKIYQYVINKERKGDY 106

[Close]

BLAST of Va04G053650.1 vs. Araport11
Match: | (Symbols: emb2742, CTPS2 | CTP synthase 2, embryo defective 2742 | chr3:4020351-4024086 REVERSE LENGTH=591)

HSP 1 Score: 61.2326 bits (147), Expect = 6.347e-12
Identity = 33/67 (49.25%), Postives = 35/67 (52.24%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPYLNTDAGTMSPFEH EVFVLDD GE                              VI+KER+GDY
Sbjct:   40 DPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDSTLTRDNNITTGKIYQSVIDKERKGDY 106

[Close]

BLAST of Va04G053650.1 vs. Araport11
Match: | (Symbols: CTPS3 | CTP synthase 3 | chr4:940873-943500 FORWARD LENGTH=466)

HSP 1 Score: 60.8474 bits (146), Expect = 8.241e-12
Identity = 32/67 (47.76%), Postives = 35/67 (52.24%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPYLNTDAGTMSPFEH EVFVLDD GE                              V++KER+GDY
Sbjct:   40 DPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDVTLTKDNNITTGKIYQSVLDKERKGDY 106

[Close]

BLAST of Va04G053650.1 vs. Araport11
Match: | (Symbols: CTPS3 | CTP synthase 3 | chr4:940873-943636 FORWARD LENGTH=484)

HSP 1 Score: 60.4622 bits (145), Expect = 9.681e-12
Identity = 32/67 (47.76%), Postives = 35/67 (52.24%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPYLNTDAGTMSPFEH EVFVLDD GE                              V++KER+GDY
Sbjct:   40 DPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDVTLTKDNNITTGKIYQSVLDKERKGDY 106

[Close]

BLAST of Va04G053650.1 vs. Araport11
Match: | (Symbols: CTPS3 | CTP synthase 3 | chr4:940873-944097 FORWARD LENGTH=556)

HSP 1 Score: 60.077 bits (144), Expect = 1.281e-11
Identity = 32/67 (47.76%), Postives = 35/67 (52.24%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPYLNTDAGTMSPFEH EVFVLDD GE                              V++KER+GDY
Sbjct:   40 DPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDVTLTKDNNITTGKIYQSVLDKERKGDY 106

[Close]

BLAST of Va04G053650.1 vs. Araport11
Match: | (Symbols: CTPS3 | CTP synthase 3 | chr4:940873-944097 FORWARD LENGTH=517)

HSP 1 Score: 60.077 bits (144), Expect = 1.333e-11
Identity = 32/67 (47.76%), Postives = 35/67 (52.24%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPYLNTDAGTMSPFEH EVFVLDD GE                              V++KER+GDY
Sbjct:   40 DPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDVTLTKDNNITTGKIYQSVLDKERKGDY 106

[Close]

BLAST of Va04G053650.1 vs. Araport11
Match: | (Symbols: CTPS3 | CTP synthase 3 | chr4:940873-944097 FORWARD LENGTH=578)

HSP 1 Score: 60.077 bits (144), Expect = 1.547e-11
Identity = 32/67 (47.76%), Postives = 35/67 (52.24%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPYLNTDAGTMSPFEH EVFVLDD GE                              V++KER+GDY
Sbjct:   40 DPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDVTLTKDNNITTGKIYQSVLDKERKGDY 106

[Close]

BLAST of Va04G053650.1 vs. Araport11
Match: | (Symbols: CTPS1 | CTP synthase 1 | chr1:10945251-10948825 REVERSE LENGTH=600)

HSP 1 Score: 60.077 bits (144), Expect = 1.679e-11
Identity = 33/67 (49.25%), Postives = 34/67 (50.75%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPYLNTDAGTMSPFEH EVFVLDD GE                              VI KER+GDY
Sbjct:   40 DPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQHVIAKERKGDY 106

[Close]

BLAST of Va04G053650.1 vs. Araport11
Match: | (Symbols: CTPS4 | CTP synthase 4 | chr4:10974980-10978998 FORWARD LENGTH=597)

HSP 1 Score: 57.3806 bits (137), Expect = 1.368e-10
Identity = 31/67 (46.27%), Postives = 33/67 (49.25%), Query Frame = 0

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPYLN DAGTMSP EH EV+VLDD GE                              V+EKERRGDY
Sbjct:   40 DPYLNIDAGTMSPIEHGEVYVLDDGGEVDLDLGNYERFMDIKLTSENNITTGKVYKHVLEKERRGDY 106

[Close]

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPYLN DAGTMSP EH EV+VLDD GE                              V+EKERRGDY
Sbjct:   40 DPYLNIDAGTMSPIEHGEVYVLDDGGEVDLDLGNYERFMDIKLTSENNITTGKVYKHVLEKERRGDY 106

[Close]

Query:   19 DPYLNTDAGTMSPFEHAEVFVLDDSGEF-----------------------------VIEKERRGDY 56
            DPYLN DAGTMSP EH EV+VLDD GE                              V+EKERRGDY
Sbjct:   40 DPYLNIDAGTMSPIEHGEVYVLDDGGEVDLDLGNYERFMDIKLTSENNITTGKVYKHVLEKERRGDY 106

The following BLAST results are available for this feature:

BLAST of Va04G053650.1 vs. UniProtKB/TrEMBL
BLAST of Va04G053650.1 vs. UniProtKB/Swiss-Prot
BLAST of Va04G053650.1 vs. Araport11

BLAST of Va04G053650.1 vs. UniProtKB/TrEMBL
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
tr\|A0A0L9UKI9\|A0A0L9UKI9_PHAAN	3.478e-75	97.32	CTP synthase N-terminal domain-containing protein ...	[more]
tr\|A0A0S3SIP5\|A0A0S3SIP5_PHAAN	4.569e-45	98.59	CTP synthase N-terminal domain-containing protein ...	[more]
tr\|A0A0S3RVM2\|A0A0S3RVM2_PHAAN	1.885e-29	92.73	CTP synthase N-terminal domain-containing protein ...	[more]
tr\|A0A8T0JRQ6\|A0A8T0JRQ6_PHAAN	1.548e-24	62.37	CTP synthase (glutamine hydrolyzing) OS=Phaseolus ...	[more]
tr\|A0A8T0LDT2\|A0A8T0LDT2_PHAAN	2.003e-24	50.78	CTP synthase OS=Phaseolus angularis OX=3914 GN=HKW...	[more]
tr\|A0A0S3RDQ8\|A0A0S3RDQ8_PHAAN	7.159e-24	78.13	CTP synthase N-terminal domain-containing protein ...	[more]
tr\|A0A8T0KCL9\|A0A8T0KCL9_PHAAN	2.816e-20	97.62	CTP synthase OS=Phaseolus angularis OX=3914 GN=HKW...	[more]
tr\|A0A0L9ULZ3\|A0A0L9ULZ3_PHAAN	2.357e-18	61.63	CTP synthase N-terminal domain-containing protein ...	[more]
tr\|A0A1R3GTE1\|A0A1R3GTE1_COCAP	1.359e-16	82.93	CTP synthase OS=Corchorus capsularis OX=210143 GN=...	[more]
tr\|A0A835P7D4\|A0A835P7D4_VANPL	2.743e-16	92.11	CTP synthase N-terminal domain-containing protein ...	[more]

BLAST of Va04G053650.1 vs. UniProtKB/Swiss-Prot
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs UniProt Swissprot)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
CTP	4.404e-10	47.76	synthase OS=Dictyostelium discoideum OX=44689 GN=c...	[more]
CTP	1.272e-9	46.27	synthase OS=Thermococcus onnurineus (strain NA1) O...	[more]
CTP	3.405e-9	44.78	synthase OS=Schizosaccharomyces pombe (strain 972 ...	[more]
CTP	8.458e-9	43.28	synthase OS=Pyrococcus horikoshii (strain ATCC 700...	[more]
CTP	8.878e-9	43.28	synthase OS=Pyrococcus furiosus (strain ATCC 43587...	[more]
CTP	9.969e-9	41.89	synthase OS=Geotalea daltonii (strain DSM 22248 / ...	[more]
CTP	1.037e-8	43.28	synthase OS=Pyrococcus abyssi (strain GE5 / Orsay)...	[more]
CTP	1.072e-8	43.28	synthase 1 (Fragment) OS=Cricetulus griseus OX=100...	[more]
CTP	1.154e-8	41.89	synthase OS=Geobacter sulfurreducens (strain ATCC ...	[more]
CTP	1.178e-8	43.28	synthase 1 OS=Mus musculus OX=10090 GN=Ctps1 PE=1 ...	[more]

BLAST of Va04G053650.1 vs. Araport11
Analysis Date: 2024-05-23 (Blastp of Vigna angularis cv. Jingnong6 v1.7.1 proteins vs arabidopsis Araport11)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
\|	6.347e-12	49.25	Symbols: emb2742, CTPS2 \| CTP synthase 2, embryo d...	[more]
\|	8.241e-12	47.76	Symbols: CTPS3 \| CTP synthase 3 \| chr4:940873-9435...	[more]
\|	9.681e-12	47.76	Symbols: CTPS3 \| CTP synthase 3 \| chr4:940873-9436...	[more]
\|	1.281e-11	47.76	Symbols: CTPS3 \| CTP synthase 3 \| chr4:940873-9440...	[more]
\|	1.333e-11	47.76	Symbols: CTPS3 \| CTP synthase 3 \| chr4:940873-9440...	[more]
\|	1.547e-11	47.76	Symbols: CTPS3 \| CTP synthase 3 \| chr4:940873-9440...	[more]
\|	1.679e-11	49.25	Symbols: CTPS1 \| CTP synthase 1 \| chr1:10945251-10...	[more]
\|	1.368e-10	46.27	Symbols: CTPS4 \| CTP synthase 4 \| chr4:10974980-10...	[more]
\|	1.368e-10	46.27	Symbols: CTPS4 \| CTP synthase 4 \| chr4:10974980-10...	[more]
\|	1.368e-10	46.27	Symbols: CTPS4 \| CTP synthase 4 \| chr4:10974980-10...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna angularis cv. Jingnong6 genome v1.7.1
Date Performed: 2024-05-23

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017456	CTP synthase, N-terminal	PFAM	PF06418	CTP_synth_N	coord: 18..45 e-value: 4.9E-6 score: 37.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 11..48 e-value: 2.4E-11 score: 45.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 18..62
IPR004468	CTP synthase	PANTHER	PTHR11550	CTP SYNTHASE	coord: 19..45

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr4:33481274..33483234-
coding sequence from alignment at Chr4:33481274..33483234-

mRNA sequence

>Va04G053650.1_Jingnong6 ID=Va04G053650.1_Jingnong6; Name=Va04G053650.1; organism=Vigna angularis; type=mRNA; length=345bp
ATGAATGCTATTTTCACTGTTTTTATCTTTGTTTTAATTTTTCCATCATT
TGCAGACCCCTACTTGAACACTGATGCGGGGACAATGTCTCCTTTCGAGC
ATGCGGAGGTTTTCGTCTTAGATGATAGCGGAGAGTTTGTTATTGAGAAG
GAGAGAAGAGGAGATTATGGAAGAGGAGAGGTCAAGCTCGGGCAGCCTTG
GGGGAGTTTGTTGAGTGTTGCAGCAGAGCCTAATTTGAAGGAGTCGACTG
CAAGGAAAAAAATTTATGACAGATGTGATGAAACTGTGAGTGGCAGACAT
CTCAAATATGCATCATCTAAAGAAAAAGAAAAAACATGTGCATAG

protein sequence of Va04G053650.1_Jingnong6

>Va04G053650.1_Jingnong6 ID=Va04G053650.1_Jingnong6; Name=Va04G053650.1_Jingnong6; organism=Vigna angularis; type=polypeptide; length=114bp
MNAIFTVFIFVLIFPSFADPYLNTDAGTMSPFEHAEVFVLDDSGEFVIEK
ERRGDYGRGEVKLGQPWGSLLSVAAEPNLKESTARKKIYDRCDETVSGRH
LKYASSKEKEKTCA

mRNA from alignment at Chr4:33481274..33483234-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Va04G053650.1_Jingnong6 ID=Va04G053650.1_Jingnong6; Name=Va04G053650.1; organism=Vigna angularis; type=mRNA; length=1961bp; location=Sequence derived from: Chr4:33481274..33483234- (Vigna angularis
ATGAATGCTATTTTCACTGTTTTTATCTTTGTTTTAATTTTTCCATCATT
TGCAGACCCCTACTTGAACACTGATGCGGGGACAATGTCTCCTTTCGAGC
ATGCGGAGGTTTTCGTCTTAGATGATAGCGGAGAGGTAAGCAAATGAAAA
TTTTCTACAACAAGATGACAGTCATTAGATTTTTTATTTCCTTCTAAATT
CAATGGAAGGTTGAGGTTGTATGTTATGTTATACTTTCCCCTGCTCTTTT
CATTTTCTCATTTTACTTCATAAGTGCAAGCTAAAACTTTCTGAGTCGTA
GTAAAAGAGGATATCTGCAGTTTGTTTTCCTCTGAAGTTTTAGATTGCCA
TTTTCATTATTTTTTTTGTTTGTGGAAGCTTGAACTTGATCTTGGGAACT
ACGAACGATTTTTGGACATTAAATTAACTAGCGACAATAACATCACTACT
AGAAAAATGTATCAGGTGAGCCAGATGTTTCTAATTGTTTTGTTTTGGAT
GTTTATAGTTTGTTATTGAGAAGGAGAGAAGAGGAGATTATGGAAGAGGA
GAGGTCAAGCTCGGGCAGCCTTGGGGGAGTTTGTTGAGGTGGGGTGGCTT
ACTCGATCTTAGTATTTGTAAATTTTTTTGAAGTTTACCCAATTCGCATT
GCTGATTGGAATTTATTTATTTATTTTTTAACCTCGGTATTTTAGTTAAT
CAATGCTTCATGTTAGGTATGTCCCATTGACACCCACCCTTAATGAAATT
GATCTCTTCTGGTACAGAAAATGAAATGATCTTGAAATCTGGTTTTTACT
TATGTTTGATTTGACTTATAAGGAGTAGAAACTTGATTTGGTTTAGGCAT
TAACACTTGGGTCAAATATGTATTGTTTAAGAAAAACTAGTGCAGTTGTC
AAGACTTATGTAGAGCCATGTTAAGGAACTGTTTGACTAGTGATCTTATT
ATATATATAGTTGAAAAGAAGGTGATTGAAATTTTTAGTTACTTAAGTAA
GATCTCACTTGAATCACTTTTTATTATAAATGATTTTCTTGCACACATAA
CAATTCATAATGTGACATTGACTATTGCTTCTGGACATCTCAGGCTATTG
AAGATTTGACTAAGGCTTTAGAGTTTGAAACCAACTCAGCAGATATTTTA
CATGAGAGAGGTATCTTTTTCTTTGACAGTCTTTTTCATTTTACATGCGA
AACAAATATATTATTCCTTTTTAATAATTATGTCCTGTCTACTGTTAATT
TCAAGTTGAAGTTTGATTATAAATTATTGCTGTGATAATGTTGACTTTTA
TTTCTGTTGAGTAATGCTACTTTTATTTCAATCAATATTAAGATAGAACT
TTTTCAATATTATATTTCTATATCCATTCAATTTTTTCCCATATTTAATT
CTAAAGATTATGGGTTAGATGGAAGTTGAAAACTAAAAATTGAAAATGAT
TTATACTTAGCAAACAGTGGGAGAAAATAATATTCATATCCATATTTTTA
GTACTATATTCTAAGGCAACCACCAAGTTTCTTCTCACTTGGTGGTGGGA
TCGGCTATATTTTAAAGCAACTAATTTACAATGACTTTTCTTTCATGCAG
GGGATATTGAGTCCATGCCTTTTATTGAAGCACTGCTGGAACCGTATTTA
TGCAGTTTAATTTGTTAATTTCATGGTTTTGATGGTTTTCTTTTTTTCTT
TTTTCTTTTAAAATTGAATTTCATACTTTTGCATTTTAAGTGGTTTAAGT
TCATGCAATATCCTAAACCTTTTCCTTTGAATTTATCCTAAAGTGTTTGG
GTCTTCAAACTAATTCCTTTATCATTTACAGTGTTGCAGCAGAGCCTAAT
TTGAAGGAGTCGACTGCAAGGAAAAAAATTTATGACAGATGTGATGAAAC
TGTGAGTGGCAGACATCTCAAATATGCATCATCTAAAGAAAAAGAAAAAA
CATGTGCATAG

Coding sequence (CDS) from alignment at Chr4:33481274..33483234-

>Va04G053650.1_Jingnong6 ID=Va04G053650.1_Jingnong6; Name=Va04G053650.1; organism=Vigna angularis; type=CDS; length=345bp; location=Sequence derived from: Chr4:33481274..33483234- (Vigna angularis
ATGAATGCTATTTTCACTGTTTTTATCTTTGTTTTAATTTTTCCATCATT
TGCAGACCCCTACTTGAACACTGATGCGGGGACAATGTCTCCTTTCGAGC
ATGCGGAGGTTTTCGTCTTAGATGATAGCGGAGAGTTTGTTATTGAGAAG
GAGAGAAGAGGAGATTATGGAAGAGGAGAGGTCAAGCTCGGGCAGCCTTG
GGGGAGTTTGTTGAGTGTTGCAGCAGAGCCTAATTTGAAGGAGTCGACTG
CAAGGAAAAAAATTTATGACAGATGTGATGAAACTGTGAGTGGCAGACAT
CTCAAATATGCATCATCTAAAGAAAAAGAAAAAACATGTGCATAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR017456	CTP_synthase_N
IPR027417	P-loop_NTPase
IPR004468	CTP_synthase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003883	CTP synthase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006221	pyrimidine nucleotide biosynthetic process

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