Vum_07G00595.1

Transcript Overview
NameVum_07G00595.1
Unique NamedrVigUmbe.FF25.1.0.Vum_07G00595.1
TypemRNA
OrganismVigna umbellata ()
Sequence length423
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr7chromosomeChr7:5460980..5464079 -Vigna umbellata FF25 genome v1.0n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna umbellata FF25 genome v1.02024-06-26
InterProScan Analysis for Vigna umbellata FF25 genome v1.0 2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL2024-08-05
Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot 2024-08-05
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjvumL076Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvumL0131Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL0335Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL0656Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvumL441Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvumL0790Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvumL555Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvumL1017Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL1022Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL1142Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL1197Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL1283Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvumL1360Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ccavumL124Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carvumL081Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavumL315Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumL085Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
carvumL263Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavumL431Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumL212Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavumL484Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carvumL390Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
vfhvumL221Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccvumL0986Cajanus cajan Asha genome v1.0Cajanus cajan
ccvumL1062Cajanus cajan Asha genome v1.0Cajanus cajan
ccvumL1137Cajanus cajan Asha genome v1.0Cajanus cajan
psvumL536Pisum sativum Cameor genome v1aPisum sativum
psvumL539Pisum sativum Cameor genome v1aPisum sativum
vrvvumL238Vigna radiata cv. VC1973A genome v6.0Vigna radiata
carvumL629Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
vfhvumL523Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvumL558Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vrvvumL292Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvumL180Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvumL186Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvumL347Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuvumL056Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vumvumL308Vigna umbellata FF25 genome v1.0Vigna umbellata
psvumL861Pisum sativum Cameor genome v1aPisum sativum
vssvumL314Vicia sativa cv. Studenica genome v1.0Vicia sativa
vumvumL331Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumL156Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvumL825Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvumL831Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvumL691Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvumL494Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvumL928Vicia sativa cv. Studenica genome v1.0Vicia sativa
vumvvaR785Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vumvvaR801Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vumvvaR835Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvumL411Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvumL498Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvumL541Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvumL398Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvumL490Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvumL528Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_01310Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.06G166000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Phvul.005G124000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
rna-KK1_022373Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.6g019400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-KK1_034640Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun05g236300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigan.07G073600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.07G055800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.Ca_v2.0_18870Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vigst.06G148700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va08G059030.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg7748.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va05G047940.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cc_v2.0_09556.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigun11g126900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.011G094200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vum_06G01085.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vum_07G00595drVigUmbe.FF25.1.0.Vum_07G00595Vigna umbellatagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.cds.Vum_07G00595.1drVigUmbe.FF25.1.0.cds.Vum_07G00595.1Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_07G00595.1drVigUmbe.FF25.1.0.cds.Vum_07G00595.1_2Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_07G00595.1drVigUmbe.FF25.1.0.cds.Vum_07G00595.1_3Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_07G00595.1drVigUmbe.FF25.1.0.cds.Vum_07G00595.1_4Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_07G00595.1drVigUmbe.FF25.1.0.cds.Vum_07G00595.1_5Vigna umbellataCDS
drVigUmbe.FF25.1.0.cds.Vum_07G00595.1drVigUmbe.FF25.1.0.cds.Vum_07G00595.1_6Vigna umbellataCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.Vum_07G00595.1.exon6drVigUmbe.FF25.1.0.Vum_07G00595.1.exon6Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_07G00595.1.exon5drVigUmbe.FF25.1.0.Vum_07G00595.1.exon5Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_07G00595.1.exon4drVigUmbe.FF25.1.0.Vum_07G00595.1.exon4Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_07G00595.1.exon3drVigUmbe.FF25.1.0.Vum_07G00595.1.exon3Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_07G00595.1.exon2drVigUmbe.FF25.1.0.Vum_07G00595.1.exon2Vigna umbellataexon
drVigUmbe.FF25.1.0.Vum_07G00595.1.exon1drVigUmbe.FF25.1.0.Vum_07G00595.1.exon1Vigna umbellataexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigUmbe.FF25.1.0.Vum_07G00595.1drVigUmbe.FF25.1.0.Vum_07G00595.1Vigna umbellatapolypeptide
drVigUmbe.FF25.1.0.Vum_07G00595.1drVigUmbe.FF25.1.0.Vum_07G00595.1-proteinVigna umbellatapolypeptide


Homology
BLAST of Vum_07G00595.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:6033797-6035216 FORWARD LENGTH=133)

HSP 1 Score: 176.792 bits (447), Expect = 6.232e-58
Identity = 84/120 (70.00%), Postives = 93/120 (77.50%), Query Frame = 0
Query:   19 NIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENENIQKS 138
             IRCHHCAGPL+  +ETS WTV P IRDSFSMIGSAVGGTASAF GFN  MPIV++ IKGPMWLHF +GAPPVIV SSACAGL GG +PA AQL SSSY AA  S   P   ++  +QKS
Sbjct:    9 EIRCHHCAGPLTRNLETSKWTVDPFIRDSFSMIGSAVGGTASAFIGFNHAMPIVRKWIKGPMWLHFLVGAPPVIVLSSACAGLAGGTVPALAQLASSSYRAAVHSSQPPQAQKDNKMQKS 128          
BLAST of Vum_07G00595.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:1047754-1049026 FORWARD LENGTH=138)

HSP 1 Score: 174.866 bits (442), Expect = 3.461e-57
Identity = 85/127 (66.93%), Postives = 104/127 (81.89%), Query Frame = 0
Query:   10 TSKLSNSTQNI--RCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENEN 134
            ++ +++S + I  RCHHCAGPL+  +ET+ WTV+P IRDSFSMIGSAVGGTASAF GF+ VMPIV++ IKGPMWLHF +GAPPVIV SSACAGL GGA+PA AQL SSSYHAA  S + PP  +++N
Sbjct:    2 SATMADSGKEIGSRCHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFHHVMPIVRKWIKGPMWLHFLVGAPPVIVVSSACAGLAGGAVPALAQLASSSYHAAVHS-SQPPQGQDKN 127          
BLAST of Vum_07G00595.1 vs. Araport11
Match: | (Symbols: RED1 | Retarded Embryo Development 1 | chr2:17511071-17512898 REVERSE LENGTH=158)

HSP 1 Score: 71.2478 bits (173), Expect = 3.021e-16
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   21 RCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQL 112
            RC  C   L+   E   WT++P++ D+ ++ GS +GG  SA + FN  +P +Q R  G   L F +G P ++V+S   A   G A+P  AQL
Sbjct:   30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQL 121          
BLAST of Vum_07G00595.1 vs. Araport11
Match: | (Symbols: RED1 | Retarded Embryo Development 1 | chr2:17509933-17512898 REVERSE LENGTH=166)

HSP 1 Score: 70.8626 bits (172), Expect = 4.419e-16
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   21 RCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQL 112
            RC  C   L+   E   WT++P++ D+ ++ GS +GG  SA + FN  +P +Q R  G   L F +G P ++V+S   A   G A+P  AQL
Sbjct:   30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAFGGYALPKFAQL 121          
BLAST of Vum_07G00595.1 vs. Araport11
Match: | (Symbols: RED1 | Retarded Embryo Development 1 | chr2:17509933-17512898 REVERSE LENGTH=204)

HSP 1 Score: 61.2326 bits (147), Expect = 4.250e-12
Identity = 31/89 (34.83%), Postives = 49/89 (55.06%), Query Frame = 0
Query:   21 RCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAA 109
            RC  C   L+   E   WT++P++ D+ ++ GS +GG  SA + FN  +P +Q R  G   L F +G P ++V+S   A   G ++ AA
Sbjct:   30 RCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSGSKRLSFLVGVPLLLVYSGVGAAF-GESLQAA 117          
BLAST of Vum_07G00595.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SGZ7|A0A0S3SGZ7_PHAAN (Transmembrane protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.07G073600 PE=4 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.078e-98
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 0
Query:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENENIQKSIK 140
            MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQL+SSSYHAAYSSPTVPPPSENENIQKSIK
Sbjct:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 140          
BLAST of Vum_07G00595.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0JE88|A0A8T0JE88_PHAAN (Transmembrane protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0216860 PE=4 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 1.417e-96
Identity = 139/144 (96.53%), Postives = 140/144 (97.22%), Query Frame = 0
Query:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLV----MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENENIQKSIK 140
            MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLV    MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQL+SSSYHAAYSSPTVPPPSENENIQKSIK
Sbjct:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVSNAVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSENENIQKSIK 144          
BLAST of Vum_07G00595.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0EWD2|A0A3Q0EWD2_VIGRR (Uncharacterized protein LOC106758629 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106758629 PE=4 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 2.337e-96
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0
Query:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENENIQKSIK 140
            MQH DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLW VSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQL+SSSYHAAYSSPTVPPPS+NENIQKSIK
Sbjct:    1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 140          
BLAST of Vum_07G00595.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0EUR3|A0A3Q0EUR3_VIGRR (Uncharacterized protein LOC106758629 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106758629 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.905e-94
Identity = 136/144 (94.44%), Postives = 138/144 (95.83%), Query Frame = 0
Query:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLV----MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENENIQKSIK 140
            MQH DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLW VSPLIRDSFSMIGSAVGGTASAFYGFNLV    MPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQL+SSSYHAAYSSPTVPPPS+NENIQKSIK
Sbjct:    1 MQHCDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWNVSPLIRDSFSMIGSAVGGTASAFYGFNLVSNAVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLVSSSYHAAYSSPTVPPPSKNENIQKSIK 144          
BLAST of Vum_07G00595.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BYF3|V7BYF3_PHAVU (Transmembrane protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G124000g PE=4 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.364e-84
Identity = 123/140 (87.86%), Postives = 127/140 (90.71%), Query Frame = 0
Query:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENENIQKSIK 140
            MQHSDN ME SKLSNS QNIRCHHCAGPLSNRMETS WTVSPLIRDSFSMIGSAVGGT SAFYGFNLVMPIVQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQL+SSSYHAAY     PPPS++E IQKSIK
Sbjct:    1 MQHSDNEMEASKLSNSIQNIRCHHCAGPLSNRMETSHWTVSPLIRDSFSMIGSAVGGTTSAFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSSYHAAY-----PPPSKDEYIQKSIK 135          
BLAST of Vum_07G00595.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6TB57|C6TB57_SOYBN (Transmembrane protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 5.139e-78
Identity = 113/136 (83.09%), Postives = 122/136 (89.71%), Query Frame = 0
Query:    5 DNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENENIQKSIK 140
            ++ ME SKLS+S QN+RCHHCAGPLS  METS WTVSPLIRDSFSMIGSAVGG ASAFYGFNLVMPIVQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQL+SS YHAAY  PT PPPS++ENIQ+S K
Sbjct:    3 NSAMEASKLSSSDQNVRCHHCAGPLSKDMETSHWTVSPLIRDSFSMIGSAVGGVASAFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSFYHAAYFFPTSPPPSKDENIQRSRK 138          
BLAST of Vum_07G00595.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SZ05|A0AA86SZ05_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS16501 PE=4 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 2.228e-77
Identity = 121/135 (89.63%), Postives = 130/135 (96.30%), Query Frame = 0
Query:    1 MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENENI 135
            +QHSDNNME S+LSNS+QNIRCHHCAGPLSNRMETS WTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQL+SSSYHAAYSSPT PPPS++++I
Sbjct:   41 IQHSDNNMEASRLSNSSQNIRCHHCAGPLSNRMETSQWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSSYHAAYSSPTAPPPSKDKHI 175          
BLAST of Vum_07G00595.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RMW4|A0A151RMW4_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_034640 PE=4 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.121e-73
Identity = 105/122 (86.07%), Postives = 116/122 (95.08%), Query Frame = 0
Query:   19 NIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENENIQKSIK 140
            +IRCHHCAGPLSN+MET+ WTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMP+VQRRIKGPMWLHF IGAPPVIVFSSACAGL GGA+PAAAQL+SSSY+AAYS+ T+PPPS++ NIQKS K
Sbjct:   14 DIRCHHCAGPLSNQMETTHWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPVVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSSYNAAYSTSTLPPPSKDGNIQKSRK 135          
BLAST of Vum_07G00595.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8K979|A0A8B8K979_ABRPR (Uncharacterized protein LOC113853839 OS=Abrus precatorius OX=3816 GN=LOC113853839 PE=4 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 7.335e-72
Identity = 108/137 (78.83%), Postives = 117/137 (85.40%), Query Frame = 0
Query:    8 METSKLSNST----QNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENENIQKSIK 140
            M  SK SNS     QNIRCHHCAGPLS  MET+ WTV P IRDSFSMIGSAVGGTASAFYGFN VMP+V+R +KGPMWLHF IGAPPVIVFSSACAGL GGA+PA AQL+SSSYHAA+SSPT+ PPSE+ENIQKS K
Sbjct:    1 MGASKPSNSQSSPYQNIRCHHCAGPLSKDMETTQWTVPPFIRDSFSMIGSAVGGTASAFYGFNHVMPVVRRSVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAAFSSPTLAPPSEDENIQKSRK 137          
BLAST of Vum_07G00595.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5N6RG49|A0A5N6RG49_9ROSI (Gb protein OS=Carpinus fangiana OX=176857 GN=FH972_016430 PE=4 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.496e-67
Identity = 98/125 (78.40%), Postives = 109/125 (87.20%), Query Frame = 0
Query:   14 SNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAGLTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENENIQKS 138
            S  + N+RCHHCAGPLS  METS WTV PLIRDSFSMIGSAVGGT SAFYGFN VMPIV+RR+KGPMWLHF IGAPPVIVFSSACAGL GGA+PA AQL SSSYHAA +SP++PPPS++E + KS
Sbjct:    4 SKPSINMRCHHCAGPLSKEMETSRWTVPPLIRDSFSMIGSAVGGTTSAFYGFNHVMPIVRRRVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAITSPSLPPPSQDEKMHKS 128          
The following BLAST results are available for this feature:
BLAST of Vum_07G00595.1 vs. Araport11
Analysis Date: 2024-06-26 (Vigna umbellata FF25 genome v1.0)
Total hits: 5
Match NameE-valueIdentityDescription
|6.232e-5870.00Symbols: no symbol available | no full name availa... [more]
|3.461e-5766.93Symbols: no symbol available | no full name availa... [more]
|3.021e-1636.96Symbols: RED1 | Retarded Embryo Development 1 | ch... [more]
|4.419e-1636.96Symbols: RED1 | Retarded Embryo Development 1 | ch... [more]
|4.250e-1234.83Symbols: RED1 | Retarded Embryo Development 1 | ch... [more]
back to top
BLAST of Vum_07G00595.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3SGZ7|A0A0S3SGZ7_PHAAN1.078e-9899.29Transmembrane protein OS=Vigna angularis var. angu... [more]
tr|A0A8T0JE88|A0A8T0JE88_PHAAN1.417e-9696.53Transmembrane protein OS=Phaseolus angularis OX=39... [more]
tr|A0A3Q0EWD2|A0A3Q0EWD2_VIGRR2.337e-9697.14Uncharacterized protein LOC106758629 isoform X2 OS... [more]
tr|A0A3Q0EUR3|A0A3Q0EUR3_VIGRR2.905e-9494.44Uncharacterized protein LOC106758629 isoform X1 OS... [more]
tr|V7BYF3|V7BYF3_PHAVU1.364e-8487.86Transmembrane protein OS=Phaseolus vulgaris OX=388... [more]
tr|C6TB57|C6TB57_SOYBN5.139e-7883.09Transmembrane protein OS=Glycine max OX=3847 PE=2 ... [more]
tr|A0AA86SZ05|A0AA86SZ05_9FABA2.228e-7789.63Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A151RMW4|A0A151RMW4_CAJCA9.121e-7386.07Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|A0A8B8K979|A0A8B8K979_ABRPR7.335e-7278.83Uncharacterized protein LOC113853839 OS=Abrus prec... [more]
tr|A0A5N6RG49|A0A5N6RG49_9ROSI1.496e-6778.40Gb protein OS=Carpinus fangiana OX=176857 GN=FH972... [more]
back to top
BLAST of Vum_07G00595.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-05 (Blastp of Vigna umbellata FF25 v1.0 proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan Analysis for Vigna umbellata FF25 genome v1.0
Date Performed: 2024-08-05
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34459OS01G0264500 PROTEINcoord: 6..138

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigUmbe.FF25.1.0.Vum_07G00595.1 ID=drVigUmbe.FF25.1.0.Vum_07G00595.1; Name=Vum_07G00595.1; organism=Vigna umbellata; type=mRNA; length=423bp
ATGCAGCACAGTGATAATAACATGGAAACCTCCAAACTCAGTAACAGTAC
TCAAAATATTCGATGCCATCACTGCGCAGGACCCCTTTCAAACCGCATGG
AAACCAGTCTCTGGACCGTTTCGCCTCTCATCAGGGATAGCTTCTCTATG
ATTGGTTCTGCCGTTGGCGGCACGGCGAGTGCATTTTATGGATTCAATCT
TGTTATGCCAATTGTCCAGAGAAGAATAAAAGGACCCATGTGGTTGCATT
TTTTCATTGGTGCACCCCCTGTGATAGTTTTCTCTTCAGCATGCGCAGGA
CTGACAGGTGGTGCTATTCCTGCTGCGGCACAACTTCTTTCCTCCTCTTA
TCATGCAGCATACTCATCTCCTACCGTACCTCCGCCATCAGAGAATGAAA
ATATTCAAAAGTCAATAAAATGA
back to top

protein sequence of drVigUmbe.FF25.1.0.Vum_07G00595.1

>drVigUmbe.FF25.1.0.Vum_07G00595.1 ID=drVigUmbe.FF25.1.0.Vum_07G00595.1; Name=drVigUmbe.FF25.1.0.Vum_07G00595.1; organism=Vigna umbellata; type=polypeptide; length=140bp
MQHSDNNMETSKLSNSTQNIRCHHCAGPLSNRMETSLWTVSPLIRDSFSM
IGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFFIGAPPVIVFSSACAG
LTGGAIPAAAQLLSSSYHAAYSSPTVPPPSENENIQKSIK
back to top

mRNA from alignment at Chr7:5460980..5464079-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigUmbe.FF25.1.0.Vum_07G00595.1 ID=drVigUmbe.FF25.1.0.Vum_07G00595.1; Name=Vum_07G00595.1; organism=Vigna umbellata; type=mRNA; length=3100bp; location=Sequence derived from: Chr7:5460980..5464079- (Vigna umbellata
ATGCAGCACAGTGATAATAACATGGAAACCTCCAAACTCAGTAACAGTAC TCAAAATATTCGATGCCATCACTGCGCAGGACCCCTTTCAAACCGCATGG TATATTTCTTCCCAATAATTGTTATTATTCTTTTATCTCTTTCTCTCTTA CCAATTTCATTCCTTTGATTCAGGAAACCAGTCTCTGGACCGTTTCGCCT CTCATCAGGGATAGCTTCTCTATGGTGAATTATTCTCACCCATTTAGTTT ATTTCTTCGATATCTATGTGGGTGTGCGAAATTTCTGATCTTTGTTTTTG GGGTTGAACATTTTCAGATTGGTTCTGCCGTTGGCGGCACGGCGAGTGCA TTTTATGGATTCAATCTTGGTATACACTCTTGCTTCTCATTTTTTGGTTA TTTTTTAAAAAAGCTTGCTAAGATTCTCTGAAATTAAAGGGGTAGTGCAT GGTGATCAGTTGCAGACTGTTATTTGGAAATAGGAACACTATGTATGTAT AGAAGTGCTTTGTCCATCATGTCTGTATTGCTTCTAAGATGTGTTGTACA GAAACTTGAGTTATGTAAACATTGTGGGAACGATTAAGTATCTGTTTGTA TTGAAGTTAGGTTTAATGTAACTGAAATTTAACACCACACTTCCTTGTAC TTTTTCACATTGGAAAGTGGTATGTTAAATATCCATTTAACTGGTGTTGA ATGTGTTTCCATACACAGCTGAAGTTTGAGTGGTTTGCAAACTTTATTTG TGGTAACTGTTTACCTTCCAAACTGAAGAATGTTAATTTTTCATAGGTTT AATTAATCATTTGTTCCTACATAACTTTTTGTATTTGTTCCTATATCTAA AAGCTCTATATTTTAGTCTTATACAAGCATTTGTTTTTGTTTTAACCCTT GTTAGCTTTCTGACAGTATAAAATTGTCTCAAAATGTGGTATAAAGACTA AAATTTAAGAGAAGAATCGCCGTGTGTAGGTACTGAAACATAGAATTTTA GATATAGGGACTAAAACGAAAACTTGGCACAAATGTTAGGATCAAATGGT TAATGAAACCTTTTTAATATTTAGAAACTAAACTATTTTGTTTTTTACTT AGCATGAAACTCTATACGTATATATTTTTGCTTACTTTCTTAGATGATTG CAACATTACACTGAATCTTTTGTCCGTGAAGACTGCTTGTTTTATGTATT TAACATATTCAGATTTCCGAAGTAATTTTTTGTTGTCCAATGCAGTTATG CCAATTGTCCAGAGAAGAATAAAAGGACCCATGTGGTTGCATTTTTTCAT TGGTGTAAGTTCATTGTTTATATATATATATATATATATATATATATATA TATATATATATATATATATATATATCTGTTGCTTTTAGTTTTTGTTCGTT GTTTTTTTTGCTAATTTTTTGCTTTTCATAACACTAGTTCATGGTTTTTC CTCGTATTCAATGCTTAGGAGATGTAAATCTTTGAATAGTTAACTCTGAG TATAACTTCAGCTCGTCATATTATGTTCTTTTAAATAGTTATGAACTTTG ACATTTCCTTTCTTCTTTAATAAGAAATCAGGGAAAGATTATTAACCAAG AGACTGCACTTCTTTCTTGTTAACCTTCTAATAAACTGACGCTGTACTGT AGTTGGCAAAGTTATGTAAATTCTTAAATGTACAAAGTTAAGCCATTTGT CCCCTAACTAATCCTCGCTAGCTATTGAAATTATTATATATCTGTGACAT CATGAGACAGTTAACTGATACTATAACCCTGTAACTTTCATACACTGGTA AAGGTACAGCCCTCGTGACCCAGACTCCTTTGCTTTCTCTGATGATCTGA ACACATTTTGTCATTTTAAATAGAAGTGAGATGACTTATATCATTTTATT ATCTGCAAAAGAATCATAAAGTATAAATAGAACTTAAAACAGGAGATTCA CTGATTATTAGTTAATTCTGGTTGTGTTTTCTACTTACAGAATTCTTTGA TAGCTAAGTTTTGAACCAGATAGATAGTTTATTTTCAGTAAACAAAAGGG GAAACAATATTGTTGGGAAGAGTTGTGGGAGGGTTTGGCTTTTGTTATGT TCTTGAAGCGGCTTCTAAAAGTCACCTTTCTCCATCCACTTTGAACTCTT TTTTATGAAAAATTTTGTTCACAATTTCTAAAACTGCTGGTGTTGTTTGT CTGCACCATCTTGGATCATCATTGTTTTCCATTTTGTATCAGTCTTGTTT TGGTGCATACATCATTGGTTGGTTTCCAGGTAAACAAGATTAGTATTTTT CTATTACCTGTAAATTCAGCTGGACCCATTCTTCTCCGTCTAATTGTGTA ATTTGTGCCATTGGGGGCATTCATAGTATATTTTGCAATATCATCGGGAA AGAATTAAGCTTCTTAGATGATGAAGCATCTTAGAGTTTTTCACTAATAA GTTGTACGTTTGAATACTGTGTTCCTTCTTAATGCAGTCAAAACATTTTT ACCATCTTATTGACATAACTTCTCTGTAATTCAGGCACCCCCTGTGATAG TTTTCTCTTCAGCATGCGCAGGACTGACAGGTGAGTTCTGAATTTGATGT TTTTTGCTGGCATGTGTATAATACTCCTTCTGTGTTCTGTTTTCTGAATT CGTAACTCTGTAGGGAAAGTTTTGGGAAAACAAAAAACACCTACAAGACT TAGTTGTGTTGAGAACTAAAAAACTTTTATGACAACACCTACTTAAAATG TTTTCTGTTTCTATGGAGTGCTAGCCATTCTATTTGTACATTTGAATAGT CTAGATTCTTGATTGAAACCGTGAACTTATTATTTTTTATTGCGTTAATT ATTGAAGAATCATAACCTGTTTTTATCATGTTATCATCTGACAATTCAAT TCAAGTATTGGAAGTCTTCATTTATAGCAGGACAAAGGGTGAAGTTTGTT TCATGCTGATAAAAGTTTCATTGACATAATGCAGGTGGTGCTATTCCTGC TGCGGCACAACTTCTTTCCTCCTCTTATCATGCAGCATACTCATCTCCTA CCGTACCTCCGCCATCAGAGAATGAAAATATTCAAAAGTCAATAAAATGA
back to top

Coding sequence (CDS) from alignment at Chr7:5460980..5464079-

>drVigUmbe.FF25.1.0.Vum_07G00595.1 ID=drVigUmbe.FF25.1.0.Vum_07G00595.1; Name=Vum_07G00595.1; organism=Vigna umbellata; type=CDS; length=423bp; location=Sequence derived from: Chr7:5460980..5464079- (Vigna umbellata
ATGCAGCACAGTGATAATAACATGGAAACCTCCAAACTCAGTAACAGTAC
TCAAAATATTCGATGCCATCACTGCGCAGGACCCCTTTCAAACCGCATGG
AAACCAGTCTCTGGACCGTTTCGCCTCTCATCAGGGATAGCTTCTCTATG
ATTGGTTCTGCCGTTGGCGGCACGGCGAGTGCATTTTATGGATTCAATCT
TGTTATGCCAATTGTCCAGAGAAGAATAAAAGGACCCATGTGGTTGCATT
TTTTCATTGGTGCACCCCCTGTGATAGTTTTCTCTTCAGCATGCGCAGGA
CTGACAGGTGGTGCTATTCCTGCTGCGGCACAACTTCTTTCCTCCTCTTA
TCATGCAGCATACTCATCTCCTACCGTACCTCCGCCATCAGAGAATGAAA
ATATTCAAAAGTCAATAAAATGA
back to top