evm.Ca_v2.0_23072

Transcript Overview
Nameevm.Ca_v2.0_23072
Unique NamedrCicArie.Frontier.2.0.Ca_v2.0_23072.1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length447
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca8_v2.0chromosomeCa8_v2.0:1839100..1841027 +Cicer arietinum cv. CDC Frontier genome v2.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.Ca_v2.0_23072drCicArie.Frontier.2.0.Ca_v2.0_23072Cicer arietinumgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_23072.1.exon1drCicArie.Frontier.2.0.Ca_v2.0_23072.1.exon1Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_23072.1.exon2drCicArie.Frontier.2.0.Ca_v2.0_23072.1.exon2Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_23072.1.exon3drCicArie.Frontier.2.0.Ca_v2.0_23072.1.exon3Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_23072.1.exon4drCicArie.Frontier.2.0.Ca_v2.0_23072.1.exon4Cicer arietinumexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_23072.1.utr5p1drCicArie.Frontier.2.0.Ca_v2.0_23072.1.utr5p1Cicer arietinumfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.cds.Ca_v2.0_23072.1drCicArie.Frontier.2.0.cds.Ca_v2.0_23072.1Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_23072.1drCicArie.Frontier.2.0.cds.Ca_v2.0_23072.1_2Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_23072.1drCicArie.Frontier.2.0.cds.Ca_v2.0_23072.1_3Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_23072.1drCicArie.Frontier.2.0.cds.Ca_v2.0_23072.1_4Cicer arietinumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_23072.1.utr3p1drCicArie.Frontier.2.0.Ca_v2.0_23072.1.utr3p1Cicer arietinumthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_23072.1drCicArie.Frontier.2.0.Ca_v2.0_23072.1Cicer arietinumpolypeptide
drCicArie.Frontier.2.0.Ca_v2.0_23072.1drCicArie.Frontier.2.0.Ca_v2.0_23072.1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:18142863-18144163 REVERSE LENGTH=175)

HSP 1 Score: 72.4034 bits (176), Expect = 2.207e-16
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0 
Query:   73 DTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            D    S  RDA L R+  +KR++LIKAWEE+EK+K EN+A KK S+V  WE S+KAS+EA+LKK E
Sbjct:   46 DKKVGSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIE 111
[Close]
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:8010004-8011624 REVERSE LENGTH=229)

HSP 1 Score: 73.1738 bits (178), Expect = 2.377e-16
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0 
Query:   78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            S  RDA L R+ TEKR++LIKAWEE+EK K EN+A KK S++  WE ++KA++EA+LKK E
Sbjct:  105 SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKME 165
[Close]
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:8010004-8011453 REVERSE LENGTH=201)

HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-16
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0 
Query:   78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            S  RDA L R+ TEKR++LIKAWEE+EK K EN+A KK S++  WE ++KA++EA+LKK E
Sbjct:   77 SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKME 137
[Close]
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:8010004-8011453 REVERSE LENGTH=202)

HSP 1 Score: 72.4034 bits (176), Expect = 3.505e-16
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0 
Query:   78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            S  RDA L R+ TEKR++LIKAWEE+EK K EN+A KK S++  WE ++KA++EA+LKK E
Sbjct:   78 SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKME 138
[Close]
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: REM1.2 | REMORIN 1.2 | chr3:22675403-22676701 REVERSE LENGTH=212)

HSP 1 Score: 67.3958 bits (163), Expect = 3.383e-14
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0 
Query:   78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            S  RD  L  +  EKRL+ ++AWEESEK+KAEN+A KK + V  WE S+KA++EAQLKK E
Sbjct:   88 SLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIE 148
[Close]
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: Rem1.3 | Remorin 1.3 | chr2:18863147-18864576 REVERSE LENGTH=190)

HSP 1 Score: 65.4698 bits (158), Expect = 9.693e-14
Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:   67 EHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLK 135
            EH  KK ++  S  RD  L  +  EK+ + IKAWEESEK+KAENRA KK S V  WE S+KA++EAQL+
Sbjct:   56 EHTPKKASS-GSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLR 123
[Close]
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:23474129-23475300 REVERSE LENGTH=151)

HSP 1 Score: 54.299 bits (129), Expect = 9.771e-10
Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0 
Query:   78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            ++ ++  L  I  EKRLALI AWEE+EK KA+ +AYK+  ++  WE + K ++E  LKK E
Sbjct:   24 ASSQNEKLVEIEKEKRLALIDAWEENEKAKAQTKAYKELCSIESWENNMKTALELDLKKME 84
[Close]
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:23474129-23475420 REVERSE LENGTH=191)

HSP 1 Score: 54.299 bits (129), Expect = 1.670e-9
Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0 
Query:   78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            ++ ++  L  I  EKRLALI AWEE+EK KA+ +AYK+  ++  WE + K ++E  LKK E
Sbjct:   64 ASSQNEKLVEIEKEKRLALIDAWEENEKAKAQTKAYKELCSIESWENNMKTALELDLKKME 124
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy Swiss-Prot (2024)
Match: sp|P93788|REMO_SOLTU (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.068e-18
Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 0 
Query:   47 LVASSLDP-----------KVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            +VA +L P           K +   ++K     D+KK+ + D   RDA L R+ TEKR++LIKAWEESEK+KAEN+A KK SA+  WE S+KA++EA+LKK E
Sbjct:   35 IVAPALPPPAEEKEKPDDSKALVVVETKAPEPADEKKEGSID---RDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKME 134
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FFA5|RMR14_ARATH (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.408e-15
Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0 
Query:   78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            S  RDA L R+ TEKR++LIKAWEE+EK K EN+A KK S++  WE ++KA++EA+LKK E
Sbjct:   78 SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKME 138
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M2D8|Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.298e-13
Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0 
Query:   78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            S  RD  L  +  EKRL+ ++AWEESEK+KAEN+A KK + V  WE S+KA++EAQLKK E
Sbjct:   88 SLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIE 148
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy Swiss-Prot (2024)
Match: sp|O80837|REMO_ARATH (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.433e-13
Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 0 
Query:   67 EHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLK 135
            EH  KK ++  S  RD  L  +  EK+ + IKAWEESEK+KAENRA KK S V  WE S+KA++EAQL+
Sbjct:   56 EHTPKKASS-GSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLR 123
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2YXN6|A0A1S2YXN6_CICAR (Remorin-like isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101500291 PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.023e-93
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 
Query:    1 MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE
Sbjct:    1 MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2YXN8|A0A1S2YXN8_CICAR (Remorin-like isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101500291 PE=3 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 6.496e-89
Identity = 136/138 (98.55%), Postives = 136/138 (98.55%), Query Frame = 0 
Query:    1 MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDST  DAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE
Sbjct:    1 MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDST--DAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 136
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LWF3|A0A8B8LWF3_ABRPR (Remorin-like OS=Abrus precatorius OX=3816 GN=LOC113868558 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.197e-42
Identity = 86/140 (61.43%), Postives = 100/140 (71.43%), Query Frame = 0 
Query:    1 MGEEDSNINKTEPESLDSVPE-ENFTIQENESEKPNTLN-TINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            MGEE SN N+TEP+ L SVPE E   +QEN+SE P+  N  +N + NE   SS+D +V DHAD  +TG          DS  +DA L R+V EKRLALIKAWEESEKTKAENRAYKK SAV LWE+SRKAS+EAQLKK E
Sbjct:    1 MGEESSNQNQTEPQ-LPSVPETEQSPVQENQSETPDPPNAVVNPDPNEKTTSSVDQQVADHADKTDTG----------DSVDKDAMLARVVAEKRLALIKAWEESEKTKAENRAYKKNSAVGLWEDSRKASVEAQLKKIE 129
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4YI18|A0A9D4YI18_PEA (Remorin C-terminal domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_025322 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.152e-41
Identity = 87/144 (60.42%), Postives = 108/144 (75.00%), Query Frame = 0 
Query:    1 MGE---EDSNINKTEPES-LDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVV--DHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            MGE   ED+++NKTE +  LD VPEE   +QE+ES      + +N E ++ V S++D + V  DHA++KET  H D KDT + S+ +D GL +IV EKRLALIKAWE+SEKTKAENRAYKKQSAV LWEES+KASIEAQLKKFE
Sbjct:    1 MGELELEDNSLNKTESQQPLDPVPEERSPLQEHES------DIVNQEPDQSVTSTVDDQKVADDHAENKETENHHDNKDT-KGSSDKDTGLAKIVAEKRLALIKAWEDSEKTKAENRAYKKQSAVGLWEESKKASIEAQLKKFE 137
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|G7KDE5|G7KDE5_MEDTR (Carboxy-terminal region remorin OS=Medicago truncatula OX=3880 GN=11443068 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.155e-39
Identity = 97/155 (62.58%), Postives = 116/155 (74.84%), Query Frame = 0 
Query:    1 MGE-EDSNINKTE-PES---LDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVV--DHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFEVINSWIYACK 148
            MGE E S+INKTE P+    LD VPEE   + E +SE  +T+ +I+ E N+   S+LD + V  DHAD+KETG+HDDKKD    +  RDAGL +IV EKRLALIKAWEESEKTKAENRAYKKQS+V LWEES+K+SIEAQLKKFEVI    + CK
Sbjct:    1 MGESEGSSINKTESPQLQSLLDPVPEELSPVVEKDSETLSTI-SISQEPNQQAISTLDDQKVADDHADNKETGDHDDKKDAKDSTD-RDAGLAKIVAEKRLALIKAWEESEKTKAENRAYKKQSSVGLWEESKKSSIEAQLKKFEVI-IISFCCK 152
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|G7KDE4|G7KDE4_MEDTR (Carboxy-terminal region remorin OS=Medicago truncatula OX=3880 GN=11443068 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.064e-37
Identity = 93/145 (64.14%), Postives = 111/145 (76.55%), Query Frame = 0 
Query:    1 MGE-EDSNINKTE-PES---LDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVV--DHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            MGE E S+INKTE P+    LD VPEE   + E +SE  +T+ +I+ E N+   S+LD + V  DHAD+KETG+HDDKKD    +  RDAGL +IV EKRLALIKAWEESEKTKAENRAYKKQS+V LWEES+K+SIEAQLKKFE
Sbjct:    1 MGESEGSSINKTESPQLQSLLDPVPEELSPVVEKDSETLSTI-SISQEPNQQAISTLDDQKVADDHADNKETGDHDDKKDAKDSTD-RDAGLAKIVAEKRLALIKAWEESEKTKAENRAYKKQSSVGLWEESKKSSIEAQLKKFE 143
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|I3SR01|I3SR01_LOTJA (Remorin C-terminal domain-containing protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.681e-37
Identity = 81/140 (57.86%), Postives = 95/140 (67.86%), Query Frame = 0 
Query:    1 MGEEDSNINKTEPES--LDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            MGEEDSN+NK E ++  +DSV E+   ++E ESEKP  +     E ++ V S +   V D          DD K  T  S  RDA L R+VTEKRLALIKAWEESE+TKAENRAYKKQSAV LWEESRKASIEA+LKK E
Sbjct:    1 MGEEDSNLNKVESQTEFVDSVSEQEPQVEEKESEKPEAVT--QEEPHKEVPSPIVQNVAD----------DDAKKVTGGSVDRDAALARVVTEKRLALIKAWEESERTKAENRAYKKQSAVGLWEESRKASIEAELKKIE 128
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3MN85|A0A2K3MN85_TRIPR (Remorin OS=Trifolium pratense OX=57577 GN=remorin PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.020e-36
Identity = 96/145 (66.21%), Postives = 110/145 (75.86%), Query Frame = 0 
Query:    1 MGE-EDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSL---DPKVV-DHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENR--AYKKQSAVVLWEESRKASIEAQLKKFE 138
            MGE E S++NKTE  SL+ VPEE+  +   ES   + LNTI+ E N+   +S+   D KVV DHAD+KETG+HDDKKDT   +  RD GL +IV EKRLALIKAWEESEKTKAENR  AYKKQSAV LWEESRKASIEAQLKKFE
Sbjct:    1 MGELEGSDLNKTES-SLEVVPEEHSPVLVKES---DALNTISQEPNDQQVTSIVDDDQKVVEDHADNKETGDHDDKKDTKDSTD-RDTGLAKIVAEKRLALIKAWEESEKTKAENRQEAYKKQSAVGLWEESRKASIEAQLKKFE 140
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|V7CK08|V7CK08_PHAVU (Remorin C-terminal domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G155800g PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.673e-31
Identity = 80/142 (56.34%), Postives = 92/142 (64.79%), Query Frame = 0 
Query:    1 MGEEDSNINKTEPES--LDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDP--KVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            MGEE SN  +TE  S  +DSVP     +QE ES+KP+        SNE V S   P  KV DHA  K+T           DS  +D  L R++TEKRLALIKAWEESEKTKAENRAYKK SAV LWE+SRKAS+EA+LKK E
Sbjct:    1 MGEEVSNKTETESHSAVVDSVP----PLQEKESDKPDP-------SNENVTSPSPPVQKVEDHAAEKDT----------EDSVSKDVMLARVLTEKRLALIKAWEESEKTKAENRAYKKHSAVELWEDSRKASVEAELKKIE 121
[Close]
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|K7K561|K7K561_SOYBN (Remorin C-terminal domain-containing protein OS=Glycine max OX=3847 GN=100815301 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.692e-31
Identity = 78/141 (55.32%), Postives = 96/141 (68.09%), Query Frame = 0 
Query:    1 MGEEDSNINKTEPE--SLDSVPEE-NFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
            MGEE S+  KTEPE   +DSVPEE N ++QE E EKP   N      +++   S        A ++E  +H  KKDT  +S  +DA L R+VTEKRLAL+KAWEESEKTKAENRAYK+ SAV  WE+S+KAS+EAQLKK E
Sbjct:    1 MGEEVSS--KTEPELHCVDSVPEEHNSSVQEKELEKPEPPN------DKVTPPS-------PAAAQEVADHASKKDT-EESLDKDAMLARVVTEKRLALVKAWEESEKTKAENRAYKRLSAVGFWEDSKKASVEAQLKKIE 125
The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11)
Total hits: 8
Match NameE-valueIdentityDescription
|2.207e-1657.58Symbols: no symbol available | no full name availa... [more]
|2.377e-1659.02Symbols: no symbol available | no full name availa... [more]
|2.409e-1659.02Symbols: no symbol available | no full name availa... [more]
|3.505e-1659.02Symbols: no symbol available | no full name availa... [more]
|3.383e-1457.38Symbols: REM1.2 | REMORIN 1.2 | chr3:22675403-2267... [more]
|9.693e-1455.07Symbols: Rem1.3 | Remorin 1.3 | chr2:18863147-1886... [more]
|9.771e-1045.90Symbols: no symbol available | no full name availa... [more]
|1.670e-945.90Symbols: no symbol available | no full name availa... [more]
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BLAST of evm.Ca_v2.0_23072 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot )
Total hits: 4
Match NameE-valueIdentityDescription
sp|P93788|REMO_SOLTU2.068e-1847.57Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1[more]
sp|Q9FFA5|RMR14_ARATH3.408e-1559.02Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM... [more]
sp|Q9M2D8|Y3126_ARATH3.298e-1357.38Uncharacterized protein At3g61260 OS=Arabidopsis t... [more]
sp|O80837|REMO_ARATH9.433e-1355.07Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=... [more]
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BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S2YXN6|A0A1S2YXN6_CICAR5.023e-93100.00Remorin-like isoform X1 OS=Cicer arietinum OX=3827... [more]
tr|A0A1S2YXN8|A0A1S2YXN8_CICAR6.496e-8998.55Remorin-like isoform X2 OS=Cicer arietinum OX=3827... [more]
tr|A0A8B8LWF3|A0A8B8LWF3_ABRPR1.197e-4261.43Remorin-like OS=Abrus precatorius OX=3816 GN=LOC11... [more]
tr|A0A9D4YI18|A0A9D4YI18_PEA2.152e-4160.42Remorin C-terminal domain-containing protein OS=Pi... [more]
tr|G7KDE5|G7KDE5_MEDTR1.155e-3962.58Carboxy-terminal region remorin OS=Medicago trunca... [more]
tr|G7KDE4|G7KDE4_MEDTR1.064e-3764.14Carboxy-terminal region remorin OS=Medicago trunca... [more]
tr|I3SR01|I3SR01_LOTJA1.681e-3757.86Remorin C-terminal domain-containing protein OS=Lo... [more]
tr|A0A2K3MN85|A0A2K3MN85_TRIPR1.020e-3666.21Remorin OS=Trifolium pratense OX=57577 GN=remorin ... [more]
tr|V7CK08|V7CK08_PHAVU1.673e-3156.34Remorin C-terminal domain-containing protein OS=Ph... [more]
tr|K7K561|K7K561_SOYBN3.692e-3155.32Remorin C-terminal domain-containing protein OS=Gl... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005516Remorin, C-terminalPFAMPF03763Remorin_Ccoord: 92..139
e-value: 3.3E-7
score: 41.4
NoneNo IPR availablePANTHERPTHR31775OS02G0117200 PROTEINcoord: 20..138

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCicArie.Frontier.2.0.Ca_v2.0_23072.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_23072.1; Name=evm.Ca_v2.0_23072; organism=Cicer arietinum; type=mRNA; length=447bp
ATGGGAGAAGAAGATTCCAACATCAACAAAACCGAACCAGAGTCTCTCGA
CTCTGTTCCTGAAGAGAATTTCACTATTCAGGAAAATGAGTCAGAGAAAC
CAAATACTCTAAACACTATCAACCATGAATCTAATGAACTCGTCGCTTCT
TCACTTGATCCGAAAGTTGTAGATCATGCTGATAGTAAGGAAACAGGGGA
GCATGATGATAAAAAAGATACTACTAGGGACTCAACTGGTAGAGATGCTG
GGCTTACAAGAATTGTAACAGAGAAAAGATTGGCTTTAATTAAAGCATGG
GAAGAAAGTGAAAAGACAAAAGCAGAAAACAGGGCATACAAGAAACAATC
TGCTGTTGTATTGTGGGAAGAAAGCAGGAAAGCATCTATAGAAGCACAAC
TCAAGAAATTTGAGGTGATTAACTCATGGATTTATGCATGTAAATAG
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protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_23072.1

>drCicArie.Frontier.2.0.Ca_v2.0_23072.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_23072.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_23072.1; organism=Cicer arietinum; type=polypeptide; length=148bp
MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVAS
SLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAW
EESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFEVINSWIYACK
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mRNA from alignment at Ca8_v2.0:1839100..1841027+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCicArie.Frontier.2.0.Ca_v2.0_23072.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_23072.1; Name=evm.Ca_v2.0_23072; organism=Cicer arietinum; type=mRNA; length=1928bp; location=Sequence derived from: Ca8_v2.0:1839100..1841027+ (Cicer arietinum
CCCTACGTTTGTCAAACAAAAGCCACCCTGTCAAGTTACTTAACATCACC
ACCTAGTTATTTCCAAATTCCAACAAGGAACATTTTCTTCTACTTAATTA
GTACCATTTTTGCTCTTTGCTTAGTTGCTATATATTCAAAGTTTAATACA
ATCATAATATTCATTAACCCTTGTCATAAACCAATTAGCTATCTTTCTTT
GCTATTATCAACCAACTTTTGAAGAAAACAGAAAAAATCATGGGAGAAGA
AGATTCCAACATCAACAAAACCGAACCAGAGTCTCTCGACTCTGTTCCTG
AAGAGAATTTCACTATTCAGGAAAATGAGTCAGAGAAACCAAATACTCTA
AACACTATCAACCATGAATCTAATGAACTCGTCGCTTCTTCACTTGATCC
GAGTAGTTATCTCACTCTTCTAACCAAATTTTACATATCTAATACTTAAC
AACGTGATTAAAGACATATTTTATCTTTATTCGTCTCTTAATTCTATCCT
ATTTGAGTTTTACACTTTTGAGTATTTTATATTTAATGATTTAAGGTGTG
GTCAGTACTTAAAGATATGAAATTTTTTGTACAATTTATTATTTAAAACA
ATATTGGTTGATTTTATTATTTTCATTCATATAGGCAAGAATGAatttgt
atagtctatatatagtactttcatttatttatttattCAACCCATCATGT
TTTTTCATACAGAAGTTGTAGATCATGCTGATAGTAAGGAAACAGGGGAG
CATGATGATAAAAAAGATACTACTAGGGACTCAACTGGTAGAGGTCATTT
TCTAAAATTTTAGTATAATTTTTTTTTGTATGCATAATAGATAGGTAATT
TTTATTTAATTTTTCATTTTATTTCATGATTTCATCAGATGCTGGGCTTA
CAAGAATTGTAACAGAGAAAAGATTGGCTTTAATTAAAGCATGGGAAGAA
AGTGAAAAGACAAAAGCAGAAAACAGGCAAGTGACCATCATATAACATAA
TCTATTAAATTAAATCTATGACTATCTTACTGTTCTTATAAATACACACC
CTTCATGTTTCAATTTGATACTTTTAAGAATGAATTTATCTTCACTCATT
TATCAGGCATCCTATTATCCTATTATTTTAGTAAGAAATTGCTTATATGT
GTGTGTGGACCACAAAATATGATTTATTTTTTTGCCAATATTTAAATCTC
GATAGTTTATGTTTTTTTAATTAGGAAATATAAATCACTTATCTATCTTA
GATTTTCTGCAAGTTCATTATATCTTTTTTCTTTTTTCTGCAAATTCATT
AGAAACGTGTTTAGCAAGAAAACGTTGGTGTACAATTTTGACGTGTATAC
TAGTTTGAAGCTATTTGACTATAATTACAAAACTTTGCCATTAAGAATTG
TTACAAGTAAGTTAATTGTTGAGTAATTTTGTTTTCTAAAACATCGTTTT
ATTTCATATGAAATTTCTTTGGCATTTGCATGACTTTGAAGTGTGGAATG
GACCTTGAAAAATTGAAACTAGTTTAAAATTAATGCATACTTCACTTGCA
TAACATACCCATTTAGATAAAATTTTCAATTTCCCTATCCATTTTGAAAA
CTAAGCTTGATGAAAGTTGAAACTTTCACACAGGGCATACAAGAAACAAT
CTGCTGTTGTATTGTGGGAAGAAAGCAGGAAAGCATCTATAGAAGCACAA
CTCAAGAAATTTGAGGTGATTAACTCATGGATTTATGCATGTAAATAGTT
GTCATAAGTAGCCACTGAGGGGTTGGAACTTATTTAATGCATCAATGAGA
CTGTTTTTCTTTTAAAAGATtagtattttgaaataaaatataaataaaaa
taatatcgaaaaagttgatgtatgtgatcttaatttttaatcagatatat
caatttttctgattactacttttgttta
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Coding sequence (CDS) from alignment at Ca8_v2.0:1839100..1841027+

>drCicArie.Frontier.2.0.Ca_v2.0_23072.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_23072.1; Name=evm.Ca_v2.0_23072; organism=Cicer arietinum; type=CDS; length=447bp; location=Sequence derived from: Ca8_v2.0:1839100..1841027+ (Cicer arietinum
ATGGGAGAAGAAGATTCCAACATCAACAAAACCGAACCAGAGTCTCTCGA
CTCTGTTCCTGAAGAGAATTTCACTATTCAGGAAAATGAGTCAGAGAAAC
CAAATACTCTAAACACTATCAACCATGAATCTAATGAACTCGTCGCTTCT
TCACTTGATCCGAAAGTTGTAGATCATGCTGATAGTAAGGAAACAGGGGA
GCATGATGATAAAAAAGATACTACTAGGGACTCAACTGGTAGAGATGCTG
GGCTTACAAGAATTGTAACAGAGAAAAGATTGGCTTTAATTAAAGCATGG
GAAGAAAGTGAAAAGACAAAAGCAGAAAACAGGGCATACAAGAAACAATC
TGCTGTTGTATTGTGGGAAGAAAGCAGGAAAGCATCTATAGAAGCACAAC
TCAAGAAATTTGAGGTGATTAACTCATGGATTTATGCATGTAAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005516Remorin_C