evm.Ca_v2.0_23072
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:18142863-18144163 REVERSE LENGTH=175) HSP 1 Score: 72.4034 bits (176), Expect = 2.207e-16 Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0 Query: 73 DTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
D S RDA L R+ +KR++LIKAWEE+EK+K EN+A KK S+V WE S+KAS+EA+LKK E
Sbjct: 46 DKKVGSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIE 111
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:8010004-8011624 REVERSE LENGTH=229) HSP 1 Score: 73.1738 bits (178), Expect = 2.377e-16 Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0 Query: 78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
S RDA L R+ TEKR++LIKAWEE+EK K EN+A KK S++ WE ++KA++EA+LKK E
Sbjct: 105 SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKME 165
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:8010004-8011453 REVERSE LENGTH=201) HSP 1 Score: 72.7886 bits (177), Expect = 2.409e-16 Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0 Query: 78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
S RDA L R+ TEKR++LIKAWEE+EK K EN+A KK S++ WE ++KA++EA+LKK E
Sbjct: 77 SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKME 137
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:8010004-8011453 REVERSE LENGTH=202) HSP 1 Score: 72.4034 bits (176), Expect = 3.505e-16 Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0 Query: 78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
S RDA L R+ TEKR++LIKAWEE+EK K EN+A KK S++ WE ++KA++EA+LKK E
Sbjct: 78 SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKME 138
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: REM1.2 | REMORIN 1.2 | chr3:22675403-22676701 REVERSE LENGTH=212) HSP 1 Score: 67.3958 bits (163), Expect = 3.383e-14 Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0 Query: 78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
S RD L + EKRL+ ++AWEESEK+KAEN+A KK + V WE S+KA++EAQLKK E
Sbjct: 88 SLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIE 148
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: Rem1.3 | Remorin 1.3 | chr2:18863147-18864576 REVERSE LENGTH=190) HSP 1 Score: 65.4698 bits (158), Expect = 9.693e-14 Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 67 EHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLK 135
EH KK ++ S RD L + EK+ + IKAWEESEK+KAENRA KK S V WE S+KA++EAQL+
Sbjct: 56 EHTPKKASS-GSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLR 123
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:23474129-23475300 REVERSE LENGTH=151) HSP 1 Score: 54.299 bits (129), Expect = 9.771e-10 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0 Query: 78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
++ ++ L I EKRLALI AWEE+EK KA+ +AYK+ ++ WE + K ++E LKK E
Sbjct: 24 ASSQNEKLVEIEKEKRLALIDAWEENEKAKAQTKAYKELCSIESWENNMKTALELDLKKME 84
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:23474129-23475420 REVERSE LENGTH=191) HSP 1 Score: 54.299 bits (129), Expect = 1.670e-9 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0 Query: 78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
++ ++ L I EKRLALI AWEE+EK KA+ +AYK+ ++ WE + K ++E LKK E
Sbjct: 64 ASSQNEKLVEIEKEKRLALIDAWEENEKAKAQTKAYKELCSIESWENNMKTALELDLKKME 124
BLAST of evm.Ca_v2.0_23072 vs. ExPASy Swiss-Prot (2024)
Match: sp|P93788|REMO_SOLTU (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.068e-18 Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 0 Query: 47 LVASSLDP-----------KVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
+VA +L P K + ++K D+KK+ + D RDA L R+ TEKR++LIKAWEESEK+KAEN+A KK SA+ WE S+KA++EA+LKK E
Sbjct: 35 IVAPALPPPAEEKEKPDDSKALVVVETKAPEPADEKKEGSID---RDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKME 134
BLAST of evm.Ca_v2.0_23072 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FFA5|RMR14_ARATH (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.408e-15 Identity = 36/61 (59.02%), Postives = 48/61 (78.69%), Query Frame = 0 Query: 78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
S RDA L R+ TEKR++LIKAWEE+EK K EN+A KK S++ WE ++KA++EA+LKK E
Sbjct: 78 SVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKME 138
BLAST of evm.Ca_v2.0_23072 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M2D8|Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.298e-13 Identity = 35/61 (57.38%), Postives = 45/61 (73.77%), Query Frame = 0 Query: 78 STGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
S RD L + EKRL+ ++AWEESEK+KAEN+A KK + V WE S+KA++EAQLKK E
Sbjct: 88 SLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIE 148
BLAST of evm.Ca_v2.0_23072 vs. ExPASy Swiss-Prot (2024)
Match: sp|O80837|REMO_ARATH (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.433e-13 Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 0 Query: 67 EHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLK 135
EH KK ++ S RD L + EK+ + IKAWEESEK+KAENRA KK S V WE S+KA++EAQL+
Sbjct: 56 EHTPKKASS-GSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLR 123
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2YXN6|A0A1S2YXN6_CICAR (Remorin-like isoform X1 OS=Cicer arietinum OX=3827 GN=LOC101500291 PE=3 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 5.023e-93 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 Query: 1 MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE
Sbjct: 1 MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2YXN8|A0A1S2YXN8_CICAR (Remorin-like isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101500291 PE=3 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 6.496e-89 Identity = 136/138 (98.55%), Postives = 136/138 (98.55%), Query Frame = 0 Query: 1 MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDST DAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE
Sbjct: 1 MGEEDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDST--DAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 136
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LWF3|A0A8B8LWF3_ABRPR (Remorin-like OS=Abrus precatorius OX=3816 GN=LOC113868558 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.197e-42 Identity = 86/140 (61.43%), Postives = 100/140 (71.43%), Query Frame = 0 Query: 1 MGEEDSNINKTEPESLDSVPE-ENFTIQENESEKPNTLN-TINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
MGEE SN N+TEP+ L SVPE E +QEN+SE P+ N +N + NE SS+D +V DHAD +TG DS +DA L R+V EKRLALIKAWEESEKTKAENRAYKK SAV LWE+SRKAS+EAQLKK E
Sbjct: 1 MGEESSNQNQTEPQ-LPSVPETEQSPVQENQSETPDPPNAVVNPDPNEKTTSSVDQQVADHADKTDTG----------DSVDKDAMLARVVAEKRLALIKAWEESEKTKAENRAYKKNSAVGLWEDSRKASVEAQLKKIE 129
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4YI18|A0A9D4YI18_PEA (Remorin C-terminal domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_025322 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 2.152e-41 Identity = 87/144 (60.42%), Postives = 108/144 (75.00%), Query Frame = 0 Query: 1 MGE---EDSNINKTEPES-LDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVV--DHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
MGE ED+++NKTE + LD VPEE +QE+ES + +N E ++ V S++D + V DHA++KET H D KDT + S+ +D GL +IV EKRLALIKAWE+SEKTKAENRAYKKQSAV LWEES+KASIEAQLKKFE
Sbjct: 1 MGELELEDNSLNKTESQQPLDPVPEERSPLQEHES------DIVNQEPDQSVTSTVDDQKVADDHAENKETENHHDNKDT-KGSSDKDTGLAKIVAEKRLALIKAWEDSEKTKAENRAYKKQSAVGLWEESKKASIEAQLKKFE 137
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|G7KDE5|G7KDE5_MEDTR (Carboxy-terminal region remorin OS=Medicago truncatula OX=3880 GN=11443068 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.155e-39 Identity = 97/155 (62.58%), Postives = 116/155 (74.84%), Query Frame = 0 Query: 1 MGE-EDSNINKTE-PES---LDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVV--DHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFEVINSWIYACK 148
MGE E S+INKTE P+ LD VPEE + E +SE +T+ +I+ E N+ S+LD + V DHAD+KETG+HDDKKD + RDAGL +IV EKRLALIKAWEESEKTKAENRAYKKQS+V LWEES+K+SIEAQLKKFEVI + CK
Sbjct: 1 MGESEGSSINKTESPQLQSLLDPVPEELSPVVEKDSETLSTI-SISQEPNQQAISTLDDQKVADDHADNKETGDHDDKKDAKDSTD-RDAGLAKIVAEKRLALIKAWEESEKTKAENRAYKKQSSVGLWEESKKSSIEAQLKKFEVI-IISFCCK 152
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|G7KDE4|G7KDE4_MEDTR (Carboxy-terminal region remorin OS=Medicago truncatula OX=3880 GN=11443068 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.064e-37 Identity = 93/145 (64.14%), Postives = 111/145 (76.55%), Query Frame = 0 Query: 1 MGE-EDSNINKTE-PES---LDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVV--DHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
MGE E S+INKTE P+ LD VPEE + E +SE +T+ +I+ E N+ S+LD + V DHAD+KETG+HDDKKD + RDAGL +IV EKRLALIKAWEESEKTKAENRAYKKQS+V LWEES+K+SIEAQLKKFE
Sbjct: 1 MGESEGSSINKTESPQLQSLLDPVPEELSPVVEKDSETLSTI-SISQEPNQQAISTLDDQKVADDHADNKETGDHDDKKDAKDSTD-RDAGLAKIVAEKRLALIKAWEESEKTKAENRAYKKQSSVGLWEESKKSSIEAQLKKFE 143
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|I3SR01|I3SR01_LOTJA (Remorin C-terminal domain-containing protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.681e-37 Identity = 81/140 (57.86%), Postives = 95/140 (67.86%), Query Frame = 0 Query: 1 MGEEDSNINKTEPES--LDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
MGEEDSN+NK E ++ +DSV E+ ++E ESEKP + E ++ V S + V D DD K T S RDA L R+VTEKRLALIKAWEESE+TKAENRAYKKQSAV LWEESRKASIEA+LKK E
Sbjct: 1 MGEEDSNLNKVESQTEFVDSVSEQEPQVEEKESEKPEAVT--QEEPHKEVPSPIVQNVAD----------DDAKKVTGGSVDRDAALARVVTEKRLALIKAWEESERTKAENRAYKKQSAVGLWEESRKASIEAELKKIE 128
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3MN85|A0A2K3MN85_TRIPR (Remorin OS=Trifolium pratense OX=57577 GN=remorin PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.020e-36 Identity = 96/145 (66.21%), Postives = 110/145 (75.86%), Query Frame = 0 Query: 1 MGE-EDSNINKTEPESLDSVPEENFTIQENESEKPNTLNTINHESNELVASSL---DPKVV-DHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENR--AYKKQSAVVLWEESRKASIEAQLKKFE 138
MGE E S++NKTE SL+ VPEE+ + ES + LNTI+ E N+ +S+ D KVV DHAD+KETG+HDDKKDT + RD GL +IV EKRLALIKAWEESEKTKAENR AYKKQSAV LWEESRKASIEAQLKKFE
Sbjct: 1 MGELEGSDLNKTES-SLEVVPEEHSPVLVKES---DALNTISQEPNDQQVTSIVDDDQKVVEDHADNKETGDHDDKKDTKDSTD-RDTGLAKIVAEKRLALIKAWEESEKTKAENRQEAYKKQSAVGLWEESRKASIEAQLKKFE 140
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|V7CK08|V7CK08_PHAVU (Remorin C-terminal domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G155800g PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.673e-31 Identity = 80/142 (56.34%), Postives = 92/142 (64.79%), Query Frame = 0 Query: 1 MGEEDSNINKTEPES--LDSVPEENFTIQENESEKPNTLNTINHESNELVASSLDP--KVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
MGEE SN +TE S +DSVP +QE ES+KP+ SNE V S P KV DHA K+T DS +D L R++TEKRLALIKAWEESEKTKAENRAYKK SAV LWE+SRKAS+EA+LKK E
Sbjct: 1 MGEEVSNKTETESHSAVVDSVP----PLQEKESDKPDP-------SNENVTSPSPPVQKVEDHAAEKDT----------EDSVSKDVMLARVLTEKRLALIKAWEESEKTKAENRAYKKHSAVELWEDSRKASVEAELKKIE 121
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Match: tr|K7K561|K7K561_SOYBN (Remorin C-terminal domain-containing protein OS=Glycine max OX=3847 GN=100815301 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.692e-31 Identity = 78/141 (55.32%), Postives = 96/141 (68.09%), Query Frame = 0 Query: 1 MGEEDSNINKTEPE--SLDSVPEE-NFTIQENESEKPNTLNTINHESNELVASSLDPKVVDHADSKETGEHDDKKDTTRDSTGRDAGLTRIVTEKRLALIKAWEESEKTKAENRAYKKQSAVVLWEESRKASIEAQLKKFE 138
MGEE S+ KTEPE +DSVPEE N ++QE E EKP N +++ S A ++E +H KKDT +S +DA L R+VTEKRLAL+KAWEESEKTKAENRAYK+ SAV WE+S+KAS+EAQLKK E
Sbjct: 1 MGEEVSS--KTEPELHCVDSVPEEHNSSVQEKELEKPEPPN------DKVTPPS-------PAAAQEVADHASKKDT-EESLDKDAMLARVVTEKRLALVKAWEESEKTKAENRAYKRLSAVGFWEDSKKASVEAQLKKIE 125 The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_23072 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11) Total hits: 8 Position : 0 Zoom : x 1
BLAST of evm.Ca_v2.0_23072 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot ) Total hits: 4 Position : 0 Zoom : x 1
BLAST of evm.Ca_v2.0_23072 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCicArie.Frontier.2.0.Ca_v2.0_23072.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_23072.1; Name=evm.Ca_v2.0_23072; organism=Cicer arietinum; type=mRNA; length=447bpback to top protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_23072.1 >drCicArie.Frontier.2.0.Ca_v2.0_23072.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_23072.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_23072.1; organism=Cicer arietinum; type=polypeptide; length=148bpback to top mRNA from alignment at Ca8_v2.0:1839100..1841027+ Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drCicArie.Frontier.2.0.Ca_v2.0_23072.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_23072.1; Name=evm.Ca_v2.0_23072; organism=Cicer arietinum; type=mRNA; length=1928bp; location=Sequence derived from: Ca8_v2.0:1839100..1841027+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca8_v2.0:1839100..1841027+ >drCicArie.Frontier.2.0.Ca_v2.0_23072.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_23072.1; Name=evm.Ca_v2.0_23072; organism=Cicer arietinum; type=CDS; length=447bp; location=Sequence derived from: Ca8_v2.0:1839100..1841027+ (Cicer arietinumback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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