evm.Ca_v2.0_17402

Transcript Overview
Nameevm.Ca_v2.0_17402
Unique NamedrCicArie.Frontier.2.0.Ca_v2.0_17402.1
TypemRNA
OrganismCicer arietinum (chickpea)
Sequence length459
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Ca6_v2.0chromosomeCa6_v2.0:18886945..18890667 +Cicer arietinum cv. CDC Frontier genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
carccaR452Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carccaR480Cajanus cajan cv. Asha genome v2.0Cajanus cajan
carvumR613Vigna umbellata FF25 genome v1.0Vigna umbellata
carvumR630Vigna umbellata FF25 genome v1.0Vigna umbellata
carvvaR516Vicia villosa cv. AU Merit genome v1.0Vicia villosa
carvvaR529Vicia villosa cv. AU Merit genome v1.0Vicia villosa
carvasR604Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvasR623Vigna angularis cv. Shumari genome v1.a1Vigna angularis
carvstR613Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvstR632Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
carvunR404Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carvunR443Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
carpvfR569Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
carpvfR614Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr11.1000908Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigun11g072800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
XM_058874565.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_06G00635.1Vigna umbellata FF25 genome v1.0Vigna umbellata
XM_058874554.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigan.06G099200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.06G111300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
evm.Ca_v2.0_17402drCicArie.Frontier.2.0.Ca_v2.0_17402Cicer arietinumgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.cds.Ca_v2.0_17402.1drCicArie.Frontier.2.0.cds.Ca_v2.0_17402.1Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_17402.1drCicArie.Frontier.2.0.cds.Ca_v2.0_17402.1_2Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_17402.1drCicArie.Frontier.2.0.cds.Ca_v2.0_17402.1_3Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_17402.1drCicArie.Frontier.2.0.cds.Ca_v2.0_17402.1_4Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_17402.1drCicArie.Frontier.2.0.cds.Ca_v2.0_17402.1_5Cicer arietinumCDS
drCicArie.Frontier.2.0.cds.Ca_v2.0_17402.1drCicArie.Frontier.2.0.cds.Ca_v2.0_17402.1_6Cicer arietinumCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_17402.1.exon1drCicArie.Frontier.2.0.Ca_v2.0_17402.1.exon1Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_17402.1.exon2drCicArie.Frontier.2.0.Ca_v2.0_17402.1.exon2Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_17402.1.exon3drCicArie.Frontier.2.0.Ca_v2.0_17402.1.exon3Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_17402.1.exon4drCicArie.Frontier.2.0.Ca_v2.0_17402.1.exon4Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_17402.1.exon5drCicArie.Frontier.2.0.Ca_v2.0_17402.1.exon5Cicer arietinumexon
drCicArie.Frontier.2.0.Ca_v2.0_17402.1.exon6drCicArie.Frontier.2.0.Ca_v2.0_17402.1.exon6Cicer arietinumexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCicArie.Frontier.2.0.Ca_v2.0_17402.1drCicArie.Frontier.2.0.Ca_v2.0_17402.1Cicer arietinumpolypeptide
drCicArie.Frontier.2.0.Ca_v2.0_17402.1drCicArie.Frontier.2.0.Ca_v2.0_17402.1-proteinCicer arietinumpolypeptide


Homology
[Close]
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: ORRM2 | | chr5:22171332-22172656 FORWARD LENGTH=156)

HSP 1 Score: 158.303 bits (399), Expect = 4.226e-50
Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 0 
Query:   47 PARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQY--VNNMSQ 147
            PAR  AEP+TNLFVSGLSKRTT+E LR  F +FGEV  A+VVTDRVSGYSKGFGFV+YAT+ED+AKGI GMDGKFLDGWVIFAEYARPR     Y   NNMS+
Sbjct:   47 PARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDGKFLDGWVIFAEYARPREQSQSYQPQNNMSR 149
[Close]
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:15743112-15744504 REVERSE LENGTH=142)

HSP 1 Score: 101.679 bits (252), Expect = 5.090e-28
Identity = 48/73 (65.75%), Postives = 57/73 (78.08%), Query Frame = 0 
Query:   58 LFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAE 130
            LFVSGLS+ TT E+L++ F  FG++V ARV+TDR SG SKGFGFV YATIEDA K    M+ KFLDGWVIF +
Sbjct:   36 LFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAEKAKAEMNAKFLDGWVIFVD 108
[Close]
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: ORRM6 | Organelle RNA Recognition Motif Protein 6 | chr1:27643801-27645386 REVERSE LENGTH=181)

HSP 1 Score: 93.9745 bits (232), Expect = 1.102e-24
Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 0 
Query:   54 PNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
            P T L+VSGLS RTT + LR+ F++FG ++H  +V D+V+   KGF F++Y T E+A K I+GM GKFLDG VIF E A+ R
Sbjct:   75 PKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQGMHGKFLDGRVIFVEEAKTR 156
[Close]
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:15743112-15744504 REVERSE LENGTH=167)

HSP 1 Score: 87.4261 bits (215), Expect = 3.223e-22
Identity = 48/98 (48.98%), Postives = 57/98 (58.16%), Query Frame = 0 
Query:   58 LFVSGLSKRTTTERLREEFQKFGEVVH-------------------------ARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAE 130
            LFVSGLS+ TT E+L++ F  FG++V                          ARV+TDR SG SKGFGFV YATIEDA K    M+ KFLDGWVIF +
Sbjct:   36 LFVSGLSRLTTNEKLQDAFASFGQLVDGNVTLGFLNPIYIEHQINRFCFHVAARVITDRDSGRSKGFGFVTYATIEDAEKAKAEMNAKFLDGWVIFVD 133
[Close]
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: S-RBP11 | small RNA-binding protein 11 | chr5:1878497-1879515 FORWARD LENGTH=146)

HSP 1 Score: 77.0258 bits (188), Expect = 1.667e-18
Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 0 
Query:   56 TNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPG 139
            + LF+ GLS  TT + L E F K G+VV A++V DRVS  SKGFGFV +A+ ++A K +   +G+ L+G  IF +YA+ +   G
Sbjct:   34 SKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALMEFNGQQLNGRTIFVDYAKAKQSLG 117
[Close]
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: RBGA1, GR-RBP6 | RNA-binding glycine-rich protein A1, glycine-rich RNA-binding protein 6 | chr1:6415226-6416283 FORWARD LENGTH=155)

HSP 1 Score: 73.9442 bits (180), Expect = 3.480e-17
Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 0 
Query:   42 PRGAAPARQMAEPNTNL-----FVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVI 127
            PR    +  M + N +L     FV GLS  T  E L+E F  FG++V A VV DR SG S+GFGFV Y +IE A   ++ M  K LDG +I
Sbjct:   17 PRALQASNAMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRII 107
[Close]
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP31 | "ARABIDOPSIS THALIANA RNA BINDING PROTEIN, APPROXIMATELY 31 KD", 31-kDa RNA binding protein | chr4:12766223-12767952 REVERSE LENGTH=329)

HSP 1 Score: 75.485 bits (184), Expect = 1.044e-16
Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 0 
Query:    4 SCDPVLIKIEGGTKSTLKGFTFTLNPMALTMRAAAAAAPRGAAPAR--QMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPP 137
            S D     +E   +  L G   T+N           AAPRG+ P R  ++ EP   ++V  L       RL + F + G+VV ARVV DR +G S+GFGFV  + +++  + I  +DG+ L+G  I    A  RPP
Sbjct:  200 SVDEAETAVEKFNRYDLNGRLLTVN----------KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPP 325
[Close]
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP31 | "ARABIDOPSIS THALIANA RNA BINDING PROTEIN, APPROXIMATELY 31 KD", 31-kDa RNA binding protein | chr4:12766223-12767952 REVERSE LENGTH=329)

HSP 1 Score: 75.485 bits (184), Expect = 1.044e-16
Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 0 
Query:    4 SCDPVLIKIEGGTKSTLKGFTFTLNPMALTMRAAAAAAPRGAAPAR--QMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPP 137
            S D     +E   +  L G   T+N           AAPRG+ P R  ++ EP   ++V  L       RL + F + G+VV ARVV DR +G S+GFGFV  + +++  + I  +DG+ L+G  I    A  RPP
Sbjct:  200 SVDEAETAVEKFNRYDLNGRLLTVN----------KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPP 325
[Close]
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: ORRM1 | Organelle RRM protein 1 | chr3:7331739-7333749 FORWARD LENGTH=374)

HSP 1 Score: 75.485 bits (184), Expect = 1.477e-16
Identity = 31/79 (39.24%), Postives = 54/79 (68.35%), Query Frame = 0 
Query:   58 LFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRP 136
            LF++GLS  T+ + LR  F+ FGE+V  +++ D++S  SKG+ F++Y T E A   ++ M+GK ++GW+I  + A+ +P
Sbjct:  284 LFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKIINGWMIVVDVAKTKP 362
[Close]
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:16912511-16913250 REVERSE LENGTH=102)

HSP 1 Score: 70.0922 bits (170), Expect = 2.706e-16
Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 0 
Query:   55 NTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYAR 133
            +  LFVS LS  TT + LR+ F  FG++  AR++ D  +   KGFGF+ + + +DA K ++ +DGK +DG +IF E A+
Sbjct:    6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKSLDGKIVDGRLIFVEVAK 84
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FIU6|ORRM2_ARATH (Organelle RRM domain-containing protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ORRM2 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.054e-49
Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 0 
Query:   47 PARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQY--VNNMSQ 147
            PAR  AEP+TNLFVSGLSKRTT+E LR  F +FGEV  A+VVTDRVSGYSKGFGFV+YAT+ED+AKGI GMDGKFLDGWVIFAEYARPR     Y   NNMS+
Sbjct:   47 PARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDGKFLDGWVIFAEYARPREQSQSYQPQNNMSR 149
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FX45|ORRM6_ARATH (Organelle RRM domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ORRM6 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.064e-23
Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 0 
Query:   54 PNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
            P T L+VSGLS RTT + LR+ F++FG ++H  +V D+V+   KGF F++Y T E+A K I+GM GKFLDG VIF E A+ R
Sbjct:   75 PKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQGMHGKFLDGRVIFVEEAKTR 156
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FFZ6|RBP11_ARATH (Small RNA-binding protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=S-RBP11 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.611e-17
Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 0 
Query:   56 TNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPG 139
            + LF+ GLS  TT + L E F K G+VV A++V DRVS  SKGFGFV +A+ ++A K +   +G+ L+G  IF +YA+ +   G
Sbjct:   34 SKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALMEFNGQQLNGRTIFVDYAKAKQSLG 117
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|P08199|NUCL_MESAU (Nucleolin OS=Mesocricetus auratus OX=10036 GN=NCL PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.267e-16
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0 
Query:   42 PRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
            PRG+  AR  ++P+  LFV GLS+ TT E L+E F+     V AR+VTDR +G SKGFGFV + + EDA    E M+   +DG  +  ++A+P+
Sbjct:  560 PRGSPNAR--SQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 648
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|P13383|NUCL_RAT (Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 2.496e-16
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0 
Query:   42 PRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
            PRG+  AR  ++P+  LFV GLS+ TT E L+E F+     V AR+VTDR +G SKGFGFV + + EDA    E M+   +DG  +  ++A+P+
Sbjct:  563 PRGSPNAR--SQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 651
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FZ84|RBG6_ARATH (Small ribosomal subunit protein mS86 OS=Arabidopsis thaliana OX=3702 GN=RBG6 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.367e-16
Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 0 
Query:   42 PRGAAPARQMAEPNTNL-----FVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVI 127
            PR    +  M + N +L     FV GLS  T  E L+E F  FG++V A VV DR SG S+GFGFV Y +IE A   ++ M  K LDG +I
Sbjct:   17 PRALQASNAMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRII 107
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q4R4J7|NUCL_MACFA (Nucleolin OS=Macaca fascicularis OX=9541 GN=NCL PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 4.953e-16
Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 0 
Query:   42 PRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
            PRG+  AR  ++P+  LFV GLS+ TT E L+E F      V AR+VTDR +G SKGFGFV + + EDA    E M+   +DG  +  ++A+P+
Sbjct:  561 PRGSPNAR--SQPSKTLFVKGLSEDTTEETLKESFDG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 649
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|P19338|NUCL_HUMAN (Nucleolin OS=Homo sapiens OX=9606 GN=NCL PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 5.049e-16
Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 0 
Query:   42 PRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
            PRG+  AR  ++P+  LFV GLS+ TT E L+E F      V AR+VTDR +G SKGFGFV + + EDA    E M+   +DG  +  ++A+P+
Sbjct:  560 PRGSPNAR--SQPSKTLFVKGLSEDTTEETLKESFDG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 648
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5RF26|NUCL_PONAB (Nucleolin OS=Pongo abelii OX=9601 GN=NCL PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 5.051e-16
Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 0 
Query:   42 PRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
            PRG+  AR  ++P+  LFV GLS+ TT E L+E F      V AR+VTDR +G SKGFGFV + + EDA    E M+   +DG  +  ++A+P+
Sbjct:  562 PRGSPNAR--SQPSKTLFVKGLSEDTTEETLKESFDG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 650
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q04836|CP31A_ARATH (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.026e-15
Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 0 
Query:    4 SCDPVLIKIEGGTKSTLKGFTFTLNPMALTMRAAAAAAPRGAAPAR--QMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPP 137
            S D     +E   +  L G   T+N           AAPRG+ P R  ++ EP   ++V  L       RL + F + G+VV ARVV DR +G S+GFGFV  + +++  + I  +DG+ L+G  I    A  RPP
Sbjct:  200 SVDEAETAVEKFNRYDLNGRLLTVN----------KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPP 325
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3EB24|A0A1S3EB24_CICAR (Organelle RRM domain-containing protein 2, mitochondrial OS=Cicer arietinum OX=3827 GN=LOC101513189 PE=4 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 1.160e-80
Identity = 123/145 (84.83%), Postives = 123/145 (84.83%), Query Frame = 0 
Query:   30 MALTMRAAAAAAPRG----------------------AAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
            MALTMRAAAAAAPRG                      AAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH
Sbjct:    1 MALTMRAAAAAAPRGLRRLFCTNPTSSSPSXXXXXSGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 145
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4ZWT5|A0A9D4ZWT5_PEA (Organelle RRM domain-containing protein 2 OS=Pisum sativum OX=3888 GN=KIW84_073537 PE=4 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 3.136e-68
Identity = 101/114 (88.60%), Postives = 107/114 (93.86%), Query Frame = 0 
Query:   38 AAAAPRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVR 151
            A+  P GA  ARQMA+PNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYAT+EDAAKGIEGMDGKFLDGWVIFAEYARPRPPPG+ VNNM++QY R
Sbjct:   34 ASTPPSGATSARQMADPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGEAVNNMTKQYGR 147
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LLC5|A0A8B8LLC5_ABRPR (Organelle RRM domain-containing protein 2, mitochondrial OS=Abrus precatorius OX=3816 GN=LOC113865668 PE=4 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.215e-64
Identity = 100/113 (88.50%), Postives = 102/113 (90.27%), Query Frame = 0 
Query:   42 PRGA--APARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
            P GA  APARQ AEPNTNLFVSGLSKRTTTERLREEF KFGEVVHARVVTDRVSGYSKGFGFV+YATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPP  YVNN + QY R 
Sbjct:   31 PSGASPAPARQTAEPNTNLFVSGLSKRTTTERLREEFSKFGEVVHARVVTDRVSGYSKGFGFVKYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPRDYVNNNNPQYGRQ 143
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445E9L1|A0A445E9L1_ARAHY (RRM domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g006165 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.243e-64
Identity = 96/109 (88.07%), Postives = 101/109 (92.66%), Query Frame = 0 
Query:   44 GAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
            GA PAR MAEPNTNLFVSGLSKRTT+E+LR+EF KFGEVVHARVVTDRVSGYSKGFGFV+YAT+EDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQ  NNM  QY RH
Sbjct:   38 GAQPARPMAEPNTNLFVSGLSKRTTSEKLRDEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPENNMPPQYGRH 146
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445E6B1|A0A445E6B1_ARAHY (RRM domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g005270 PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 3.178e-63
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0 
Query:   44 GAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
            GA PAR MAEPNTNLFVSGLSKRTT+E+LR+EF KFGEVVHARVVTDRVSGYSKGFGFV+YAT+EDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQ  NNM  QY R 
Sbjct:   38 GAQPARPMAEPNTNLFVSGLSKRTTSEKLRDEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPENNMPPQYGRQ 146
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P4CHI0|A0A6P4CHI0_ARADU (Organelle RRM domain-containing protein 2, mitochondrial OS=Arachis duranensis OX=130453 GN=LOC107475743 PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 3.178e-63
Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0 
Query:   44 GAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
            GA PAR MAEPNTNLFVSGLSKRTT+E+LR+EF KFGEVVHARVVTDRVSGYSKGFGFV+YAT+EDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQ  NNM  QY R 
Sbjct:   38 GAQPARPMAEPNTNLFVSGLSKRTTSEKLRDEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPENNMPPQYGRQ 146
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|I1KED0|I1KED0_SOYBN (RRM domain-containing protein OS=Glycine max OX=3847 GN=100784609 PE=4 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 7.891e-63
Identity = 98/113 (86.73%), Postives = 100/113 (88.50%), Query Frame = 0 
Query:   42 PRGAAPA--RQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
            P GA PA  R  AEPNTNLFVSGLSKRT TERLREEF KFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQ +N+ S QY R 
Sbjct:   33 PPGATPAPTRPTAEPNTNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPLNSNSSQYGRQ 145
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KEL2|A0A445KEL2_GLYSO (Organelle RRM domain-containing protein 2, mitochondrial OS=Glycine soja OX=3848 GN=D0Y65_015864 PE=4 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 8.708e-63
Identity = 98/113 (86.73%), Postives = 100/113 (88.50%), Query Frame = 0 
Query:   42 PRGAAPA--RQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
            P GA PA  R  AEPNTNLFVSGLSKRT TERLREEF KFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQ +N+ S QY R 
Sbjct:   33 PPGATPAPTRPTAEPNTNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPLNSNSSQYGRQ 145
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2R2S3|A0A0B2R2S3_GLYSO (Glycine-rich RNA-binding protein 2 OS=Glycine soja OX=3848 GN=glysoja_039321 PE=4 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.224e-62
Identity = 98/113 (86.73%), Postives = 100/113 (88.50%), Query Frame = 0 
Query:   42 PRGAAPA--RQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
            P GA PA  R  AEPNTNLFVSGLSKRT TERLREEF KFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQ +N+ S QY R 
Sbjct:   31 PPGATPAPTRPTAEPNTNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPLNSNSSQYGRQ 143
[Close]
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6PSW2|A0A2Z6PSW2_TRISU (RRM domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_94280 PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.370e-62
Identity = 91/110 (82.73%), Postives = 99/110 (90.00%), Query Frame = 0 
Query:   42 PRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVR 151
            P GA   R MA+P+TNLFVSGL+KRTTTE LRE FQKFGEVVHARV+TDRVSGYSKGFGFVQYAT+EDAAKGIEGMDGKFLDGWVIFAEYARPRPPPG+  NN ++QY R
Sbjct:   37 PSGATSTRAMADPSTNLFVSGLNKRTTTENLREAFQKFGEVVHARVITDRVSGYSKGFGFVQYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGEAANNTTKQYGR 146
The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|4.226e-5075.73Symbols: ORRM2 | | chr5:22171332-22172656 FORWARD... [more]
|5.090e-2865.75Symbols: no symbol available | no full name availa... [more]
|1.102e-2453.66Symbols: ORRM6 | Organelle RNA Recognition Motif P... [more]
|3.223e-2248.98Symbols: no symbol available | no full name availa... [more]
|1.667e-1845.24Symbols: S-RBP11 | small RNA-binding protein 11 | ... [more]
|3.480e-1745.05Symbols: RBGA1, GR-RBP6 | RNA-binding glycine-rich... [more]
|1.044e-1634.56Symbols: ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP... [more]
|1.044e-1634.56Symbols: ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP... [more]
|1.477e-1639.24Symbols: ORRM1 | Organelle RRM protein 1 | chr3:73... [more]
|2.706e-1641.77Symbols: no symbol available | no full name availa... [more]
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BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot )
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9FIU6|ORRM2_ARATH4.054e-4975.73Organelle RRM domain-containing protein 2, mitocho... [more]
sp|Q9FX45|ORRM6_ARATH1.064e-2353.66Organelle RRM domain-containing protein 6, chlorop... [more]
sp|Q9FFZ6|RBP11_ARATH1.611e-1745.24Small RNA-binding protein 11, chloroplastic OS=Ara... [more]
sp|P08199|NUCL_MESAU2.267e-1644.68Nucleolin OS=Mesocricetus auratus OX=10036 GN=NCL ... [more]
sp|P13383|NUCL_RAT2.496e-1644.68Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=... [more]
sp|Q9FZ84|RBG6_ARATH3.367e-1645.05Small ribosomal subunit protein mS86 OS=Arabidopsi... [more]
sp|Q4R4J7|NUCL_MACFA4.953e-1644.68Nucleolin OS=Macaca fascicularis OX=9541 GN=NCL PE... [more]
sp|P19338|NUCL_HUMAN5.049e-1644.68Nucleolin OS=Homo sapiens OX=9606 GN=NCL PE=1 SV=3[more]
sp|Q5RF26|NUCL_PONAB5.051e-1644.68Nucleolin OS=Pongo abelii OX=9601 GN=NCL PE=2 SV=3[more]
sp|Q04836|CP31A_ARATH1.026e-1534.5631 kDa ribonucleoprotein, chloroplastic OS=Arabido... [more]
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BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A1S3EB24|A0A1S3EB24_CICAR1.160e-8084.83Organelle RRM domain-containing protein 2, mitocho... [more]
tr|A0A9D4ZWT5|A0A9D4ZWT5_PEA3.136e-6888.60Organelle RRM domain-containing protein 2 OS=Pisum... [more]
tr|A0A8B8LLC5|A0A8B8LLC5_ABRPR1.215e-6488.50Organelle RRM domain-containing protein 2, mitocho... [more]
tr|A0A445E9L1|A0A445E9L1_ARAHY2.243e-6488.07RRM domain-containing protein OS=Arachis hypogaea ... [more]
tr|A0A445E6B1|A0A445E6B1_ARAHY3.178e-6387.16RRM domain-containing protein OS=Arachis hypogaea ... [more]
tr|A0A6P4CHI0|A0A6P4CHI0_ARADU3.178e-6387.16Organelle RRM domain-containing protein 2, mitocho... [more]
tr|I1KED0|I1KED0_SOYBN7.891e-6386.73RRM domain-containing protein OS=Glycine max OX=38... [more]
tr|A0A445KEL2|A0A445KEL2_GLYSO8.708e-6386.73Organelle RRM domain-containing protein 2, mitocho... [more]
tr|A0A0B2R2S3|A0A0B2R2S3_GLYSO1.224e-6286.73Glycine-rich RNA-binding protein 2 OS=Glycine soja... [more]
tr|A0A2Z6PSW2|A0A2Z6PSW2_TRISU9.370e-6282.73RRM domain-containing protein OS=Trifolium subterr... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.70.330:FF:000417coord: 37..147
e-value: 4.6E-56
score: 189.2
NoneNo IPR availablePANTHERPTHR48029NUCLEOLAR PROTEIN 8coord: 52..134
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 58..124
e-value: 7.3E-16
score: 69.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 56..134
score: 18.563835
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 33..141
e-value: 4.6E-29
score: 103.4
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 40..148

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCicArie.Frontier.2.0.Ca_v2.0_17402.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_17402.1; Name=evm.Ca_v2.0_17402; organism=Cicer arietinum; type=mRNA; length=459bp
ATGAGTGAGTCATGTGACCCAGTACTCATCAAGATTGAAGGAGGTACAAA
GAGCACTTTAAAGGGTTTTACTTTTACCTTAAACCCCATGGCTTTGACGA
TGAGGGCTGCAGCGGCGGCGGCTCCCCGCGGAGCTGCTCCCGCCCGACAG
ATGGCTGAGCCCAACACCAACCTCTTCGTCTCTGGGCTTAGCAAACGTAC
TACAACAGAGAGGCTGCGGGAAGAATTTCAAAAGTTTGGTGAAGTTGTTC
ATGCAAGGGTGGTAACTGATCGAGTCTCAGGTTACTCTAAGGGGTTTGGC
TTTGTGCAATATGCTACTATAGAAGATGCTGCTAAGGGCATTGAAGGCAT
GGATGGCAAGTTTTTGGATGGCTGGGTTATATTTGCAGAGTATGCAAGAC
CAAGACCACCACCTGGACAATATGTAAATAATATGTCTCAACAGTATGTA
CGACATTAA
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protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_17402.1

>drCicArie.Frontier.2.0.Ca_v2.0_17402.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_17402.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_17402.1; organism=Cicer arietinum; type=polypeptide; length=152bp
MSESCDPVLIKIEGGTKSTLKGFTFTLNPMALTMRAAAAAAPRGAAPARQ
MAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFG
FVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYV
RH
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mRNA from alignment at Ca6_v2.0:18886945..18890667+

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCicArie.Frontier.2.0.Ca_v2.0_17402.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_17402.1; Name=evm.Ca_v2.0_17402; organism=Cicer arietinum; type=mRNA; length=3723bp; location=Sequence derived from: Ca6_v2.0:18886945..18890667+ (Cicer arietinum
ATGAGTGAGTCATGTGACCCAGTACTCATCAAGATTGAAGGAGGTACAAA
GAGCACTTTAAAGGTATAAGACCATTTATTTTTGTGGATATACTAAAAAT
TTATTAAGATACAAAAAGCCCAATGACCATGAGCAGTTTAAAGTTTAAAG
ACCATTTAAGTTTTTGCATACACTAAAAATTTATTAAGAAAAAAAAGTAC
TTAGGCCCAATGACCATCAGTAAAAGGAAATATTGAACTTTTTATAGGGT
AATGTAAGggtgtttttttctctcactcttcaatattatcaaatatataa
aatatatgtttgcatattggtcgattcatatatgtaaaatatatctttaa
gttaatcgatccaaacaaaatttaaaaacttttaggaagacttgagggta
aaaaaataagttttAATGCTTTGACCACAAATTTGTCACGGAAAGCACTA
GAAATTGCATCAAAAATCATCGTGTAATCTGAAAAAGTCTATTATCATAT
GAAAGTGTAAAAAAAATTTatatttaaacatctttaatttttctatactt
atttaagaccctatttaatctttatttatctcttcttattacatcacaaa
catacgacttcaaacatactattacatctatttctatctcttttaaagag
tagagcaaatatatagatatcAAAATCTTTTTAATAATAAATGTTTTAAA
aaatttaaattaaaatcttcatatatatatatatatttaaatttaATGCA
CTAATATTTTCCATTGAATATAATATAACATGGATGTAATACCTTTTCTA
TATTTAGTATTAATATTAGACacaagtaaagtataacaatcctttagtgt
gacatgttatttatcttacattaaaattgatataagtaattaatttttta
agaaatgcgGCCATATAATACGAAACTCATTGATTaaaatacaaaaataa
ataatttaaaatgaagaaacaaaaaGCCATTTAGGTTATTTGATGAGACA
ATGAATAACCCACCGCCACAACACAAGTATTGTATTTAGCATTTTATATA
CAAAATCGCAGTAGACGATTTCTGATATTCTCCTTCATTGCTTCTCTTTC
CACTCACCCAGGGTTTTACTTTTACCTTAAACCCCATGGCTTTGACGATG
AGGGCTGCAGCGGCGGCGGCTCCCCGCGGTTTGCGCCGCCTTTTCTGCAC
TAACCCAACCTCTTCTTCTCCCTCTTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAGGAGCTG
CTCCCGCCCGACAGATGGCTGAGCCCAACACCAACCTCTTCGTCTCTGGT
CCGTCTTTCCCTTCTCAATTCTCTTCTTCAAAACATATCCTTGTTGTTGT
TGCTGTGGTTAATTAGATGCTAACTGTGAATTAAATGTGTATATTTTGAT
ATTATTGAGCTTTGATTTCAAGTATAGGTTTTCATTTTATTTATACAAAT
CCGAATTTTCCAAGATCTTATATTTTTTTCTTTCATTATACTTATAGGCT
ATGTATTAATCTCTTATTCCCTTGTGGTTGGATATTTCGAATCATCTGAA
TAACTtgtctagtattaaatatgtatatgtatatTCAACATTGTCATGGC
TAGTGTTAACTATCTCTGAGACAGATTTACACATATGACACATTTGTTAA
GAAAAAACACCAGCTGCGAGGTTTACACACCTGCAAAAAGTAATTTTTAT
GCTTCCTGAGTACTTCCTTAGAAAGAACCTTTTCCATGTTGGTTTGTGAA
TAAGAAAGCTTCTAATTGTACTGCAAGAGAAATCTATGGGTATAAGTAGA
AACGAGAGAGGCTTTAATGCTTTTAAGTTCTTAACTATGTTTATGTAAAT
TGTGTAGTTGTATAAAGTAAAGATTAGACAGATAATATAATCTAGAGAAA
GCCTCTAAGAAAGGAACATTCCCTAGTCCATGCTCAAGTGTCTACTCAGA
ACTTATTAGTATCATCAGCAAACCCAAAAGAGACCTATGGTCTAACAGGA
ACATATTTGTTAGCAGAAATCTCTAGAAAGATTAGAGTGAGTAACATTGT
TTGATTGTAGTGTTGACTTGATGCCCTAGTTATTTTCATTTTATCCCACA
CCTTCTCTAGATTACACGGTTTGGTGACACCAAAGAGGGCTGTAACCGTT
TGTGGCCCCAAAGCAATGTTTTTGACTCCCCAAATTCCCAGACTCAATCC
CCTTGATTTTTTCCTCTCTCAACAGACTATTCGTGCTACAATTGTCATTT
TCAAGTTTTAATCCCCTCTTCCTTCCCTTCCATATATAAAAATAAAATTG
TCTATTGCATTGCTAAAGTAGGGCCTTTTCCCAATGCAATCTGTTACTTG
TAATATTCAGTTGACTGTTGATTTTTGTTGTGGCTTAAACTTTCAGGGCT
TAGCAAACGTACTACAACAGAGAGGCTGCGGGAAGAATTTCAAAAGTTTG
GTGAAGTTGTTCATGGTTTGTTCTCCATATTTTAACATTTGTACTGTTCA
GCTATCTATGTTTTTGTTATGTAATGATGTCTTGAAAATCTGCTCTGAAA
CAATAATGGTTTTCTATCTGCTGATTTCAGCAAGGGTGGTAACTGATCGA
GTCTCAGGTTACTCTAAGGGGTTTGGCTTTGTGCAATATGCTACTATAGA
AGATGCTGCTAAGGGCATTGAAGGCATGGATGGCAAGGTAAGGTTTATTA
TACCTGCACCTCTATGGGAACCCTGGGAAGTGTAtttatttttgtcttgg
atttgtctcttcatttttatatttatGCAGAATAAGAATTCAATATGACC
ACCTAAGATAAACTGAAATTACCTACACGGCATCATATTCACATCATATT
AGAAGATTGAACTCTAATTGCTTGACATCGCCAACAATGCATTCACTGTT
CTTGAAGCACAAGTTTGCATGGTCCTTCACTTGTGTTTTGTCTTGGATTT
GTCTCTTCATTTGTATATTTATGAAGAATAGATAAACTTAAATTAGGTAC
ACGGCAACATATTCACATCACATTAGAAGATTGAACTCTAATTGCTTGAG
ATTGCCAACAATGCATTCACTGTTCTTGAAGCACAAGTTTGCATGGACCT
TTACTTGAGTTTGTCATAAATCTCATTTACTATTATTCGAACTCAATTTT
TCCCTTCTCCTCTTCACATGAAATTCAATGATTTAACTCTTCAATATTAT
GAGTATTTGTTTAATCACCCCGAACCTGTAAATCATTTATCAATTACTAA
TCTCAACTAAATATGCATTGTTTGGCGTTACAACTCTAATGTTTCTGAGA
GTTTTGTTGACAATTGGTTGTTGTTTTAATGAGCTTTTCATAACCTCAGT
CTTGTTTATGTCTGGAAAACCTTTCTATGTTCTTCTACAAATTTGATGCC
ATGGTTGCTCTCTATTTTTCTTGCCGAAGTTTCTTTTTAAATAATGCTGA
CTGATGCTTCCCTTTGCTATACAGTTTTTGGATGGCTGGGTTATATTTGC
AGAGTATGCAAGACCAAGACCACCACCTGGACAATATGTAAATAATATGT
CTCAACAGTATGTACGACATTAA
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Coding sequence (CDS) from alignment at Ca6_v2.0:18886945..18890667+

>drCicArie.Frontier.2.0.Ca_v2.0_17402.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_17402.1; Name=evm.Ca_v2.0_17402; organism=Cicer arietinum; type=CDS; length=459bp; location=Sequence derived from: Ca6_v2.0:18886945..18890667+ (Cicer arietinum
ATGAGTGAGTCATGTGACCCAGTACTCATCAAGATTGAAGGAGGTACAAA
GAGCACTTTAAAGGGTTTTACTTTTACCTTAAACCCCATGGCTTTGACGA
TGAGGGCTGCAGCGGCGGCGGCTCCCCGCGGAGCTGCTCCCGCCCGACAG
ATGGCTGAGCCCAACACCAACCTCTTCGTCTCTGGGCTTAGCAAACGTAC
TACAACAGAGAGGCTGCGGGAAGAATTTCAAAAGTTTGGTGAAGTTGTTC
ATGCAAGGGTGGTAACTGATCGAGTCTCAGGTTACTCTAAGGGGTTTGGC
TTTGTGCAATATGCTACTATAGAAGATGCTGCTAAGGGCATTGAAGGCAT
GGATGGCAAGTTTTTGGATGGCTGGGTTATATTTGCAGAGTATGCAAGAC
CAAGACCACCACCTGGACAATATGTAAATAATATGTCTCAACAGTATGTA
CGACATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding