evm.Ca_v2.0_17402
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: ORRM2 | | chr5:22171332-22172656 FORWARD LENGTH=156) HSP 1 Score: 158.303 bits (399), Expect = 4.226e-50 Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 0 Query: 47 PARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQY--VNNMSQ 147
PAR AEP+TNLFVSGLSKRTT+E LR F +FGEV A+VVTDRVSGYSKGFGFV+YAT+ED+AKGI GMDGKFLDGWVIFAEYARPR Y NNMS+
Sbjct: 47 PARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDGKFLDGWVIFAEYARPREQSQSYQPQNNMSR 149
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:15743112-15744504 REVERSE LENGTH=142) HSP 1 Score: 101.679 bits (252), Expect = 5.090e-28 Identity = 48/73 (65.75%), Postives = 57/73 (78.08%), Query Frame = 0 Query: 58 LFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAE 130
LFVSGLS+ TT E+L++ F FG++V ARV+TDR SG SKGFGFV YATIEDA K M+ KFLDGWVIF +
Sbjct: 36 LFVSGLSRLTTNEKLQDAFASFGQLVDARVITDRDSGRSKGFGFVTYATIEDAEKAKAEMNAKFLDGWVIFVD 108
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: ORRM6 | Organelle RNA Recognition Motif Protein 6 | chr1:27643801-27645386 REVERSE LENGTH=181) HSP 1 Score: 93.9745 bits (232), Expect = 1.102e-24 Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 0 Query: 54 PNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
P T L+VSGLS RTT + LR+ F++FG ++H +V D+V+ KGF F++Y T E+A K I+GM GKFLDG VIF E A+ R
Sbjct: 75 PKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQGMHGKFLDGRVIFVEEAKTR 156
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:15743112-15744504 REVERSE LENGTH=167) HSP 1 Score: 87.4261 bits (215), Expect = 3.223e-22 Identity = 48/98 (48.98%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 58 LFVSGLSKRTTTERLREEFQKFGEVVH-------------------------ARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAE 130
LFVSGLS+ TT E+L++ F FG++V ARV+TDR SG SKGFGFV YATIEDA K M+ KFLDGWVIF +
Sbjct: 36 LFVSGLSRLTTNEKLQDAFASFGQLVDGNVTLGFLNPIYIEHQINRFCFHVAARVITDRDSGRSKGFGFVTYATIEDAEKAKAEMNAKFLDGWVIFVD 133
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: S-RBP11 | small RNA-binding protein 11 | chr5:1878497-1879515 FORWARD LENGTH=146) HSP 1 Score: 77.0258 bits (188), Expect = 1.667e-18 Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 0 Query: 56 TNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPG 139
+ LF+ GLS TT + L E F K G+VV A++V DRVS SKGFGFV +A+ ++A K + +G+ L+G IF +YA+ + G
Sbjct: 34 SKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALMEFNGQQLNGRTIFVDYAKAKQSLG 117
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: RBGA1, GR-RBP6 | RNA-binding glycine-rich protein A1, glycine-rich RNA-binding protein 6 | chr1:6415226-6416283 FORWARD LENGTH=155) HSP 1 Score: 73.9442 bits (180), Expect = 3.480e-17 Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 0 Query: 42 PRGAAPARQMAEPNTNL-----FVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVI 127
PR + M + N +L FV GLS T E L+E F FG++V A VV DR SG S+GFGFV Y +IE A ++ M K LDG +I
Sbjct: 17 PRALQASNAMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRII 107
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP31 | "ARABIDOPSIS THALIANA RNA BINDING PROTEIN, APPROXIMATELY 31 KD", 31-kDa RNA binding protein | chr4:12766223-12767952 REVERSE LENGTH=329) HSP 1 Score: 75.485 bits (184), Expect = 1.044e-16 Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 0 Query: 4 SCDPVLIKIEGGTKSTLKGFTFTLNPMALTMRAAAAAAPRGAAPAR--QMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPP 137
S D +E + L G T+N AAPRG+ P R ++ EP ++V L RL + F + G+VV ARVV DR +G S+GFGFV + +++ + I +DG+ L+G I A RPP
Sbjct: 200 SVDEAETAVEKFNRYDLNGRLLTVN----------KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPP 325
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: ATRBP33, ATRBP31, CP31A, RBP31, CP33a, CP31 | "ARABIDOPSIS THALIANA RNA BINDING PROTEIN, APPROXIMATELY 31 KD", 31-kDa RNA binding protein | chr4:12766223-12767952 REVERSE LENGTH=329) HSP 1 Score: 75.485 bits (184), Expect = 1.044e-16 Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 0 Query: 4 SCDPVLIKIEGGTKSTLKGFTFTLNPMALTMRAAAAAAPRGAAPAR--QMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPP 137
S D +E + L G T+N AAPRG+ P R ++ EP ++V L RL + F + G+VV ARVV DR +G S+GFGFV + +++ + I +DG+ L+G I A RPP
Sbjct: 200 SVDEAETAVEKFNRYDLNGRLLTVN----------KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPP 325
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: ORRM1 | Organelle RRM protein 1 | chr3:7331739-7333749 FORWARD LENGTH=374) HSP 1 Score: 75.485 bits (184), Expect = 1.477e-16 Identity = 31/79 (39.24%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 58 LFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRP 136
LF++GLS T+ + LR F+ FGE+V +++ D++S SKG+ F++Y T E A ++ M+GK ++GW+I + A+ +P
Sbjct: 284 LFITGLSFYTSEKTLRAAFEGFGELVEVKIIMDKISKRSKGYAFLEYTTEEAAGTALKEMNGKIINGWMIVVDVAKTKP 362
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:16912511-16913250 REVERSE LENGTH=102) HSP 1 Score: 70.0922 bits (170), Expect = 2.706e-16 Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 0 Query: 55 NTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYAR 133
+ LFVS LS TT + LR+ F FG++ AR++ D + KGFGF+ + + +DA K ++ +DGK +DG +IF E A+
Sbjct: 6 SAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKSLDGKIVDGRLIFVEVAK 84
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FIU6|ORRM2_ARATH (Organelle RRM domain-containing protein 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=ORRM2 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.054e-49 Identity = 78/103 (75.73%), Postives = 86/103 (83.50%), Query Frame = 0 Query: 47 PARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQY--VNNMSQ 147
PAR AEP+TNLFVSGLSKRTT+E LR F +FGEV A+VVTDRVSGYSKGFGFV+YAT+ED+AKGI GMDGKFLDGWVIFAEYARPR Y NNMS+
Sbjct: 47 PARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGIAGMDGKFLDGWVIFAEYARPREQSQSYQPQNNMSR 149
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FX45|ORRM6_ARATH (Organelle RRM domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ORRM6 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.064e-23 Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 0 Query: 54 PNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
P T L+VSGLS RTT + LR+ F++FG ++H +V D+V+ KGF F++Y T E+A K I+GM GKFLDG VIF E A+ R
Sbjct: 75 PKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQGMHGKFLDGRVIFVEEAKTR 156
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FFZ6|RBP11_ARATH (Small RNA-binding protein 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=S-RBP11 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.611e-17 Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 0 Query: 56 TNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPG 139
+ LF+ GLS TT + L E F K G+VV A++V DRVS SKGFGFV +A+ ++A K + +G+ L+G IF +YA+ + G
Sbjct: 34 SKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQIVMDRVSDRSKGFGFVTFASADEAQKALMEFNGQQLNGRTIFVDYAKAKQSLG 117
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|P08199|NUCL_MESAU (Nucleolin OS=Mesocricetus auratus OX=10036 GN=NCL PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 2.267e-16 Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0 Query: 42 PRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
PRG+ AR ++P+ LFV GLS+ TT E L+E F+ V AR+VTDR +G SKGFGFV + + EDA E M+ +DG + ++A+P+
Sbjct: 560 PRGSPNAR--SQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 648
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|P13383|NUCL_RAT (Nucleolin OS=Rattus norvegicus OX=10116 GN=Ncl PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 2.496e-16 Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 0 Query: 42 PRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
PRG+ AR ++P+ LFV GLS+ TT E L+E F+ V AR+VTDR +G SKGFGFV + + EDA E M+ +DG + ++A+P+
Sbjct: 563 PRGSPNAR--SQPSKTLFVKGLSEDTTEETLKESFEG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 651
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FZ84|RBG6_ARATH (Small ribosomal subunit protein mS86 OS=Arabidopsis thaliana OX=3702 GN=RBG6 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.367e-16 Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 0 Query: 42 PRGAAPARQMAEPNTNL-----FVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVI 127
PR + M + N +L FV GLS T E L+E F FG++V A VV DR SG S+GFGFV Y +IE A ++ M K LDG +I
Sbjct: 17 PRALQASNAMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRII 107
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q4R4J7|NUCL_MACFA (Nucleolin OS=Macaca fascicularis OX=9541 GN=NCL PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 4.953e-16 Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 0 Query: 42 PRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
PRG+ AR ++P+ LFV GLS+ TT E L+E F V AR+VTDR +G SKGFGFV + + EDA E M+ +DG + ++A+P+
Sbjct: 561 PRGSPNAR--SQPSKTLFVKGLSEDTTEETLKESFDG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 649
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|P19338|NUCL_HUMAN (Nucleolin OS=Homo sapiens OX=9606 GN=NCL PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 5.049e-16 Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 0 Query: 42 PRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
PRG+ AR ++P+ LFV GLS+ TT E L+E F V AR+VTDR +G SKGFGFV + + EDA E M+ +DG + ++A+P+
Sbjct: 560 PRGSPNAR--SQPSKTLFVKGLSEDTTEETLKESFDG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 648
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5RF26|NUCL_PONAB (Nucleolin OS=Pongo abelii OX=9601 GN=NCL PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 5.051e-16 Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 0 Query: 42 PRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPR 135
PRG+ AR ++P+ LFV GLS+ TT E L+E F V AR+VTDR +G SKGFGFV + + EDA E M+ +DG + ++A+P+
Sbjct: 562 PRGSPNAR--SQPSKTLFVKGLSEDTTEETLKESFDG---SVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPK 650
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q04836|CP31A_ARATH (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.026e-15 Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 0 Query: 4 SCDPVLIKIEGGTKSTLKGFTFTLNPMALTMRAAAAAAPRGAAPAR--QMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPP 137
S D +E + L G T+N AAPRG+ P R ++ EP ++V L RL + F + G+VV ARVV DR +G S+GFGFV + +++ + I +DG+ L+G I A RPP
Sbjct: 200 SVDEAETAVEKFNRYDLNGRLLTVN----------KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPP 325
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3EB24|A0A1S3EB24_CICAR (Organelle RRM domain-containing protein 2, mitochondrial OS=Cicer arietinum OX=3827 GN=LOC101513189 PE=4 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 1.160e-80 Identity = 123/145 (84.83%), Postives = 123/145 (84.83%), Query Frame = 0 Query: 30 MALTMRAAAAAAPRG----------------------AAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
MALTMRAAAAAAPRG AAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH
Sbjct: 1 MALTMRAAAAAAPRGLRRLFCTNPTSSSPSXXXXXSGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 145
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4ZWT5|A0A9D4ZWT5_PEA (Organelle RRM domain-containing protein 2 OS=Pisum sativum OX=3888 GN=KIW84_073537 PE=4 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 3.136e-68 Identity = 101/114 (88.60%), Postives = 107/114 (93.86%), Query Frame = 0 Query: 38 AAAAPRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVR 151
A+ P GA ARQMA+PNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYAT+EDAAKGIEGMDGKFLDGWVIFAEYARPRPPPG+ VNNM++QY R
Sbjct: 34 ASTPPSGATSARQMADPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGEAVNNMTKQYGR 147
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LLC5|A0A8B8LLC5_ABRPR (Organelle RRM domain-containing protein 2, mitochondrial OS=Abrus precatorius OX=3816 GN=LOC113865668 PE=4 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.215e-64 Identity = 100/113 (88.50%), Postives = 102/113 (90.27%), Query Frame = 0 Query: 42 PRGA--APARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
P GA APARQ AEPNTNLFVSGLSKRTTTERLREEF KFGEVVHARVVTDRVSGYSKGFGFV+YATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPP YVNN + QY R
Sbjct: 31 PSGASPAPARQTAEPNTNLFVSGLSKRTTTERLREEFSKFGEVVHARVVTDRVSGYSKGFGFVKYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPRDYVNNNNPQYGRQ 143
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445E9L1|A0A445E9L1_ARAHY (RRM domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g006165 PE=4 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 2.243e-64 Identity = 96/109 (88.07%), Postives = 101/109 (92.66%), Query Frame = 0 Query: 44 GAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
GA PAR MAEPNTNLFVSGLSKRTT+E+LR+EF KFGEVVHARVVTDRVSGYSKGFGFV+YAT+EDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQ NNM QY RH
Sbjct: 38 GAQPARPMAEPNTNLFVSGLSKRTTSEKLRDEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPENNMPPQYGRH 146
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445E6B1|A0A445E6B1_ARAHY (RRM domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A02g005270 PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 3.178e-63 Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0 Query: 44 GAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
GA PAR MAEPNTNLFVSGLSKRTT+E+LR+EF KFGEVVHARVVTDRVSGYSKGFGFV+YAT+EDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQ NNM QY R
Sbjct: 38 GAQPARPMAEPNTNLFVSGLSKRTTSEKLRDEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPENNMPPQYGRQ 146
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P4CHI0|A0A6P4CHI0_ARADU (Organelle RRM domain-containing protein 2, mitochondrial OS=Arachis duranensis OX=130453 GN=LOC107475743 PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 3.178e-63 Identity = 95/109 (87.16%), Postives = 100/109 (91.74%), Query Frame = 0 Query: 44 GAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
GA PAR MAEPNTNLFVSGLSKRTT+E+LR+EF KFGEVVHARVVTDRVSGYSKGFGFV+YAT+EDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQ NNM QY R
Sbjct: 38 GAQPARPMAEPNTNLFVSGLSKRTTSEKLRDEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPENNMPPQYGRQ 146
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|I1KED0|I1KED0_SOYBN (RRM domain-containing protein OS=Glycine max OX=3847 GN=100784609 PE=4 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 7.891e-63 Identity = 98/113 (86.73%), Postives = 100/113 (88.50%), Query Frame = 0 Query: 42 PRGAAPA--RQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
P GA PA R AEPNTNLFVSGLSKRT TERLREEF KFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQ +N+ S QY R
Sbjct: 33 PPGATPAPTRPTAEPNTNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPLNSNSSQYGRQ 145
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KEL2|A0A445KEL2_GLYSO (Organelle RRM domain-containing protein 2, mitochondrial OS=Glycine soja OX=3848 GN=D0Y65_015864 PE=4 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 8.708e-63 Identity = 98/113 (86.73%), Postives = 100/113 (88.50%), Query Frame = 0 Query: 42 PRGAAPA--RQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
P GA PA R AEPNTNLFVSGLSKRT TERLREEF KFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQ +N+ S QY R
Sbjct: 33 PPGATPAPTRPTAEPNTNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPLNSNSSQYGRQ 145
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2R2S3|A0A0B2R2S3_GLYSO (Glycine-rich RNA-binding protein 2 OS=Glycine soja OX=3848 GN=glysoja_039321 PE=4 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.224e-62 Identity = 98/113 (86.73%), Postives = 100/113 (88.50%), Query Frame = 0 Query: 42 PRGAAPA--RQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVRH 152
P GA PA R AEPNTNLFVSGLSKRT TERLREEF KFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQ +N+ S QY R
Sbjct: 31 PPGATPAPTRPTAEPNTNLFVSGLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQPLNSNSSQYGRQ 143
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6PSW2|A0A2Z6PSW2_TRISU (RRM domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_94280 PE=4 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 9.370e-62 Identity = 91/110 (82.73%), Postives = 99/110 (90.00%), Query Frame = 0 Query: 42 PRGAAPARQMAEPNTNLFVSGLSKRTTTERLREEFQKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGQYVNNMSQQYVR 151
P GA R MA+P+TNLFVSGL+KRTTTE LRE FQKFGEVVHARV+TDRVSGYSKGFGFVQYAT+EDAAKGIEGMDGKFLDGWVIFAEYARPRPPPG+ NN ++QY R
Sbjct: 37 PSGATSTRAMADPSTNLFVSGLNKRTTTENLREAFQKFGEVVHARVITDRVSGYSKGFGFVQYATLEDAAKGIEGMDGKFLDGWVIFAEYARPRPPPGEAANNTTKQYGR 146 The following BLAST results are available for this feature:
BLAST of evm.Ca_v2.0_17402 vs. Araport11
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs arabidopsis Araport11) Total hits: 10 Position : 0 Zoom : x 1
BLAST of evm.Ca_v2.0_17402 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt Swissprot ) Total hits: 10 Position : 0 Zoom : x 1
BLAST of evm.Ca_v2.0_17402 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-26 (Blastp of Cicer arietinum cv. CDC Frontier v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Cicer arietinum cv. CDC Frontier genome v2.0
Date Performed: 2024-07-26 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCicArie.Frontier.2.0.Ca_v2.0_17402.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_17402.1; Name=evm.Ca_v2.0_17402; organism=Cicer arietinum; type=mRNA; length=459bpback to top protein sequence of drCicArie.Frontier.2.0.Ca_v2.0_17402.1 >drCicArie.Frontier.2.0.Ca_v2.0_17402.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_17402.1; Name=drCicArie.Frontier.2.0.Ca_v2.0_17402.1; organism=Cicer arietinum; type=polypeptide; length=152bpback to top mRNA from alignment at Ca6_v2.0:18886945..18890667+ Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>drCicArie.Frontier.2.0.Ca_v2.0_17402.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_17402.1; Name=evm.Ca_v2.0_17402; organism=Cicer arietinum; type=mRNA; length=3723bp; location=Sequence derived from: Ca6_v2.0:18886945..18890667+ (Cicer arietinumback to top Coding sequence (CDS) from alignment at Ca6_v2.0:18886945..18890667+ >drCicArie.Frontier.2.0.Ca_v2.0_17402.1 ID=drCicArie.Frontier.2.0.Ca_v2.0_17402.1; Name=evm.Ca_v2.0_17402; organism=Cicer arietinum; type=CDS; length=459bp; location=Sequence derived from: Ca6_v2.0:18886945..18890667+ (Cicer arietinumback to top |