Cc_v2.0_09855.1

Transcript Overview
NameCc_v2.0_09855.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_09855.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length429
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG04_v2.0chromosomeCcLG04_v2.0:14384408..14387715 +Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjccaL080Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccaL126Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0254Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL626Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL1030Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL1080Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL043Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL045Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR423Pisum sativum Cameor genome v1aPisum sativum
ccapsR442Pisum sativum Cameor genome v1aPisum sativum
ccavrvR386Vigna radiata cv. VC1973A genome v6.0Vigna radiata
carccaL480Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavrvR396Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR383Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR445Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccapvR449Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR449Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR482Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccapvR490Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR413Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR420Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR428Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavumR460Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR371Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR476Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR484Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR387Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavuR391Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccccaL1163Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL1336Cajanus cajan Asha genome v1.0Cajanus cajan
ccavunR319Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR330Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR455Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR465Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR487Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR494Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.011G128800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.Ca_v2.0_02169Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Psat5g249920.1Pisum sativum Cameor genome v1aPisum sativum
Vigun11g087500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.6g073720.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat7g163600.1Pisum sativum Cameor genome v1aPisum sativum
Vigun11g087500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va05G041800.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg44333.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun05g207600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.005G094400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.Ca_v2.0_17451Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Va08G045400.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_07G00854.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vum_06G00751.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg8496.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_014638672.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigun05g207600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
PvulFLAVERTChr11.1000819Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr05.1000723Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_024113Cajanus cajan Asha genome v1.0Cajanus cajan
rna-KK1_033405Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_09855drCajCajn.Asha.2.0.Cc_v2.0_09855Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_09855.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_09855.1.exon1Cajanus cajanexon
Cc_v2.0_09855.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_09855.1.exon2Cajanus cajanexon
Cc_v2.0_09855.1.exon3drCajCajn.Asha.2.0.Cc_v2.0_09855.1.exon3Cajanus cajanexon
Cc_v2.0_09855.1.exon4drCajCajn.Asha.2.0.Cc_v2.0_09855.1.exon4Cajanus cajanexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_09855.1.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_09855.1.utr5p1Cajanus cajanfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_09855.1drCajCajn.Asha.2.0.cds.Cc_v2.0_09855.1Cajanus cajanCDS
cds.Cc_v2.0_09855.1drCajCajn.Asha.2.0.cds.Cc_v2.0_09855.1_2Cajanus cajanCDS
cds.Cc_v2.0_09855.1drCajCajn.Asha.2.0.cds.Cc_v2.0_09855.1_3Cajanus cajanCDS
cds.Cc_v2.0_09855.1drCajCajn.Asha.2.0.cds.Cc_v2.0_09855.1_4Cajanus cajanCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_09855.1.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_09855.1.utr3p1Cajanus cajanthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_09855.1drCajCajn.Asha.2.0.Cc_v2.0_09855.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_09855.1drCajCajn.Asha.2.0.Cc_v2.0_09855.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TL30|A0A151TL30_CAJCA (Multiprotein-bridging factor 1a OS=Cajanus cajan OX=3821 GN=KK1_002153 PE=4 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 4.956e-97
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6T1P5|C6T1P5_SOYBN (HTH cro/C1-type domain-containing protein OS=Glycine max OX=3847 GN=100500420 PE=2 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.134e-94
Identity = 138/142 (97.18%), Postives = 141/142 (99.30%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            MSGVGP+SQDWEPVVLRKK PTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLD+DTENLAHEKVPTELKKA+MQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct:    1 MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDDDTENLAHEKVPTELKKAIMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2RI55|A0A0B2RI55_GLYSO (Multiprotein-bridging factor 1b OS=Glycine soja OX=3848 GN=D0Y65_034199 PE=4 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.134e-94
Identity = 138/142 (97.18%), Postives = 141/142 (99.30%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            MSGVGP+SQDWEPVVLRKK PTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLD+DTENLAHEKVPTELKKA+MQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct:    1 MSGVGPLSQDWEPVVLRKKAPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDDDTENLAHEKVPTELKKAIMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371GM81|A0A371GM81_MUCPR (Multiprotein-bridging factor 1b OS=Mucuna pruriens OX=157652 GN=MBF1B PE=4 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.921e-93
Identity = 135/142 (95.07%), Postives = 141/142 (99.30%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            MSGVGPISQDWEPVVLRKKPP AAAKKDEKAVNAARRSGA+IETLKKYNAGTNKAASSSTSLNTKRLDED+ENLAH+KVPTELK+A+MQARM+KKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct:    1 MSGVGPISQDWEPVVLRKKPPNAAAKKDEKAVNAARRSGADIETLKKYNAGTNKAASSSTSLNTKRLDEDSENLAHDKVPTELKRAIMQARMEKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86T9F6|A0AA86T9F6_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS16816 PE=4 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 4.345e-92
Identity = 132/142 (92.96%), Postives = 141/142 (99.30%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            MSGVGP+SQDWEPVVLRKK PTAAA+KDEKAVNAARR+GAEI+T+KKYNAGTNKAASSSTSLNTKRLD+DTENLAH++VPTELKKA+MQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct:    1 MSGVGPLSQDWEPVVLRKKAPTAAARKDEKAVNAARRTGAEIDTIKKYNAGTNKAASSSTSLNTKRLDDDTENLAHDRVPTELKKAIMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RR76|A0A151RR76_CAJCA (Multiprotein-bridging factor 1b OS=Cajanus cajan OX=3821 GN=KK1_033405 PE=4 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 1.045e-91
Identity = 131/142 (92.25%), Postives = 141/142 (99.30%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            MSGVGP+SQDWEPVVLRKK PTAAA+KDEKAVNAARRSGAEI+T+KK+NAGTNKAASSSTSLNTKRLD+DTENLAH++VPTELKKA+MQARMDKKLTQAQLAQ+INEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct:    1 MSGVGPLSQDWEPVVLRKKAPTAAARKDEKAVNAARRSGAEIDTVKKFNAGTNKAASSSTSLNTKRLDDDTENLAHDRVPTELKKAIMQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6NCX0|A0A4D6NCX0_VIGUN (Putative transcription factor OS=Vigna unguiculata OX=3917 GN=DEO72_LG10g990 PE=4 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 1.870e-91
Identity = 130/142 (91.55%), Postives = 141/142 (99.30%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            MSGVGP+SQDWEPVVLRKK PTAAA+KDEKAVNAARRSGA+I+T+KKYNAGTNK+ASSSTSLNTKRLD+DTENLAH++VPTELKKA+MQARMDKKLTQAQLAQLINEKPQ+IQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct:    1 MSGVGPLSQDWEPVVLRKKAPTAAARKDEKAVNAARRSGADIDTIKKYNAGTNKSASSSTSLNTKRLDDDTENLAHDRVPTELKKAIMQARMDKKLTQAQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SB06|A0A0S3SB06_PHAAN (HTH cro/C1-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G113400 PE=4 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 7.055e-91
Identity = 133/142 (93.66%), Postives = 137/142 (96.48%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            MSG GPISQDWEPVVLRKK PTAAAK DEKAVNAARR+GA+IET KKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKA+MQARMDKKLTQAQLAQ+INEKPQVIQEYESGKAIPNQQIIGKLERALG KLRGKK
Sbjct:    1 MSGAGPISQDWEPVVLRKKAPTAAAKTDEKAVNAARRAGADIETQKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAIMQARMDKKLTQAQLAQVINEKPQVIQEYESGKAIPNQQIIGKLERALGTKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V547|A0A0L9V547_PHAAN (Multiprotein-bridging factor OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0245590 PE=4 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 7.055e-91
Identity = 133/142 (93.66%), Postives = 137/142 (96.48%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            MSG GPISQDWEPVVLRKK PTAAAK DEKAVNAARR+GA+IET KKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKA+MQARMDKKLTQAQLAQ+INEKPQVIQEYESGKAIPNQQIIGKLERALG KLRGKK
Sbjct:    1 MSGAGPISQDWEPVVLRKKAPTAAAKTDEKAVNAARRAGADIETQKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAIMQARMDKKLTQAQLAQVINEKPQVIQEYESGKAIPNQQIIGKLERALGTKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VV63|A0A1S3VV63_VIGRR (Multiprotein-bridging factor 1b OS=Vigna radiata var. radiata OX=3916 GN=LOC106778492 PE=4 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.059e-90
Identity = 128/142 (90.14%), Postives = 141/142 (99.30%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            MSGVGP+SQDWEPVVLRKK PT+AA+KDEKAVNAARRSGA+I+T+KKYNAGTNK+ASSSTSLNTKRLD+DTENLAH++VPTELKKA+MQARMDKKLTQ+QLAQLINEKPQ+IQEYESGKAIPNQQIIGKLERALGAKLRGKK
Sbjct:    1 MSGVGPLSQDWEPVVLRKKAPTSAARKDEKAVNAARRSGADIDTIKKYNAGTNKSASSSTSLNTKRLDDDTENLAHDRVPTELKKAIMQARMDKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SJI8|MBF1A_ARATH (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.012e-86
Identity = 119/142 (83.80%), Postives = 134/142 (94.37%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            M+G+GPI+QDWEPVV+RKKP  AAAK+DEK VNAARRSGA+IET++K+NAGTNKAASS TSLNTK LD+DTENL HE+VPTELKKA+MQAR DKKLTQ+QLAQ+INEKPQVIQEYESGKAIPNQQI+ KLERALGAKLRGKK
Sbjct:    1 MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LXT3|MBF1B_ARATH (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 3.061e-84
Identity = 115/142 (80.99%), Postives = 135/142 (95.07%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            M+G+GPI+QDWEPVV+RK+ P AAAK+DEK VNAARRSGA+IET++K+NAG+NKAASS TSLNTK+LD+DTENL+H++VPTELKKA+MQAR +KKLTQ+QLA LINEKPQVIQEYESGKAIPNQQI+ KLERALGAKLRGKK
Sbjct:    1 MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LV58|MBF1C_ARATH (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.457e-43
Identity = 69/139 (49.64%), Postives = 104/139 (74.82%), Query Frame = 0 
Query:    5 GPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTS--LNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
            G ++QDWEPVVL K    +   +D KAVNAA R+G  ++T+KK++AG+NK   S+    +NTK+L+E+TE  A ++V  E++  + +AR++KK++QA LA+ INE+ QV+QEYE+GKA+PNQ ++ K+E+ LG KLRGK
Sbjct:    7 GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGK 145
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6GPQ6|EDF1_XENLA (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.648e-43
Identity = 73/133 (54.89%), Postives = 95/133 (71.43%), Query Frame = 0 
Query:   10 DWEPV-VLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
            DW+ V VLRKK PTAA  K ++A+ AA+R G E+ET KK++AG NK    + + NT +LD +TE L H++VP E+ K + Q R  K +TQ  LA  INEKPQVI +YE GKAIPN Q++GK+ER +G KLRGK
Sbjct:    5 DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNK--QHTITRNTAKLDRETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMGKIERVIGLKLRGK 135
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O60869|EDF1_HUMAN (Endothelial differentiation-related factor 1 OS=Homo sapiens OX=9606 GN=EDF1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.179e-42
Identity = 74/133 (55.64%), Postives = 95/133 (71.43%), Query Frame = 0 
Query:   10 DWEPV-VLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
            DW+ V VLRKK PTAA  K ++A+ AA+R G ++ET KK+ AG NK    S + NT +LD +TE L H++V  E+ K + Q R  K LTQ  LA  INEKPQVI +YESG+AIPN Q++GK+ERA+G KLRGK
Sbjct:    5 DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRGK 135
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q3T0V7|EDF1_BOVIN (Endothelial differentiation-related factor 1 OS=Bos taurus OX=9913 GN=EDF1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 5.179e-42
Identity = 74/133 (55.64%), Postives = 95/133 (71.43%), Query Frame = 0 
Query:   10 DWEPV-VLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
            DW+ V VLRKK PTAA  K ++A+ AA+R G ++ET KK+ AG NK    S + NT +LD +TE L H++V  E+ K + Q R  K LTQ  LA  INEKPQVI +YESG+AIPN Q++GK+ERA+G KLRGK
Sbjct:    5 DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRGK 135
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5ZMC0|EDF1_CHICK (Endothelial differentiation-related factor 1 homolog OS=Gallus gallus OX=9031 GN=EDF1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 7.927e-42
Identity = 73/133 (54.89%), Postives = 95/133 (71.43%), Query Frame = 0 
Query:   10 DWEPV-VLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
            DW+ V VLRKK P+AA  K ++AV AA+R G ++ET KK+ AG NK      + NT +LD +TE L H++VP E+ K + Q R  K +TQ  LA  INEKPQVI +YESG+AIPN Q++GK+ERA+G KLRGK
Sbjct:    5 DWDTVTVLRKKGPSAAQAKSKQAVLAAQRRGEDVETSKKWAAGQNK--QHFITKNTAKLDRETEELHHDRVPLEVGKVIQQGRQSKGMTQKDLATKINEKPQVIADYESGRAIPNNQVMGKIERAIGLKLRGK 135
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P69736|EDF1_RAT (Endothelial differentiation-related factor 1 OS=Rattus norvegicus OX=10116 GN=Edf1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.577e-41
Identity = 73/133 (54.89%), Postives = 95/133 (71.43%), Query Frame = 0 
Query:   10 DWEPV-VLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
            DW+ V VLRKK PTAA  K ++A+ AA+R G ++ET KK+ AG NK    S + NT +LD +TE L H++V  E+ K + + R  K LTQ  LA  INEKPQVI +YESG+AIPN Q++GK+ERA+G KLRGK
Sbjct:    5 DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRGK 135
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9JMG1|EDF1_MOUSE (Endothelial differentiation-related factor 1 OS=Mus musculus OX=10090 GN=Edf1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 2.577e-41
Identity = 73/133 (54.89%), Postives = 95/133 (71.43%), Query Frame = 0 
Query:   10 DWEPV-VLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
            DW+ V VLRKK PTAA  K ++A+ AA+R G ++ET KK+ AG NK    S + NT +LD +TE L H++V  E+ K + + R  K LTQ  LA  INEKPQVI +YESG+AIPN Q++GK+ERA+G KLRGK
Sbjct:    5 DWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNK--QHSITKNTAKLDRETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRGK 135
[Close]
BLAST of Cc_v2.0_09855.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6PBY3|EDF1_DANRE (Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=edf1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 5.811e-41
Identity = 69/132 (52.27%), Postives = 92/132 (69.70%), Query Frame = 0 
Query:   10 DWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
            DW+ V + +K  +AA  K ++AV AA+R G  +ET KK+ AG NK      + NT +LD +TE L+H++VP E+ K + Q R +K LTQ  LA  INEKPQ+I EYE GKAIPN Q++GK+ERA+G KLRGK
Sbjct:    5 DWDTVTVLRKKGSAAQSKSKQAVTAAQRKGEAVETSKKWAAGQNK--QHVVTKNTAKLDRETEELSHQRVPLEVGKVIQQGRQNKGLTQKDLATKINEKPQIIAEYECGKAIPNNQVMGKIERAIGLKLRGK 134
[Close]
BLAST of Cc_v2.0_09855.1 vs. Araport11
Match: | (Symbols: MBF1A, ATMBF1A | ARABIDOPSIS THALIANA MULTIPROTEIN BRIDGING FACTOR 1A, multiprotein bridging factor 1A | chr2:17774972-17776116 FORWARD LENGTH=142)

HSP 1 Score: 251.521 bits (641), Expect = 2.104e-87
Identity = 119/142 (83.80%), Postives = 134/142 (94.37%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            M+G+GPI+QDWEPVV+RKKP  AAAK+DEK VNAARRSGA+IET++K+NAGTNKAASS TSLNTK LD+DTENL HE+VPTELKKA+MQAR DKKLTQ+QLAQ+INEKPQVIQEYESGKAIPNQQI+ KLERALGAKLRGKK
Sbjct:    1 MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. Araport11
Match: | (Symbols: MBF1B, ATMBF1B | multiprotein bridging factor 1B, MULTIPROTEIN BRIDGING FACTOR 1B | chr3:21707367-21708625 FORWARD LENGTH=142)

HSP 1 Score: 246.128 bits (627), Expect = 3.199e-85
Identity = 115/142 (80.99%), Postives = 135/142 (95.07%), Query Frame = 0 
Query:    1 MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 142
            M+G+GPI+QDWEPVV+RK+ P AAAK+DEK VNAARRSGA+IET++K+NAG+NKAASS TSLNTK+LD+DTENL+H++VPTELKKA+MQAR +KKLTQ+QLA LINEKPQVIQEYESGKAIPNQQI+ KLERALGAKLRGKK
Sbjct:    1 MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGTSLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKAIPNQQILSKLERALGAKLRGKK 142
[Close]
BLAST of Cc_v2.0_09855.1 vs. Araport11
Match: | (Symbols: MBF1C, ATMBF1C | multiprotein bridging factor 1C | chr3:8918755-8919201 FORWARD LENGTH=148)

HSP 1 Score: 143.28 bits (360), Expect = 1.518e-44
Identity = 69/139 (49.64%), Postives = 104/139 (74.82%), Query Frame = 0 
Query:    5 GPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSSTS--LNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQLAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGK 141
            G ++QDWEPVVL K    +   +D KAVNAA R+G  ++T+KK++AG+NK   S+    +NTK+L+E+TE  A ++V  E++  + +AR++KK++QA LA+ INE+ QV+QEYE+GKA+PNQ ++ K+E+ LG KLRGK
Sbjct:    7 GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVPNQAVLAKMEKVLGVKLRGK 145
[Close]
BLAST of Cc_v2.0_09855.1 vs. Araport11
Match: | (Symbols: MBF1C, ATMBF1C | multiprotein bridging factor 1C | chr3:8918755-8919169 FORWARD LENGTH=97)

HSP 1 Score: 73.559 bits (179), Expect = 9.774e-18
Identity = 38/89 (42.70%), Postives = 60/89 (67.42%), Query Frame = 0 
Query:    5 GPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNAGTNKAASSST--SLNTKRLDEDTENLAHEKVPTELKKAVMQAR 91
            G ++QDWEPVVL K    +   +D KAVNAA R+G  ++T+KK++AG+NK   S+    +NTK+L+E+TE  A ++V  E++  + + R
Sbjct:    7 GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVINTKKLEEETEPAAMDRVKAEVRLCLRRWR 95
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_09855.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151TL30|A0A151TL30_CAJCA4.956e-97100.00Multiprotein-bridging factor 1a OS=Cajanus cajan O... [more]
tr|C6T1P5|C6T1P5_SOYBN1.134e-9497.18HTH cro/C1-type domain-containing protein OS=Glyci... [more]
tr|A0A0B2RI55|A0A0B2RI55_GLYSO1.134e-9497.18Multiprotein-bridging factor 1b OS=Glycine soja OX... [more]
tr|A0A371GM81|A0A371GM81_MUCPR2.921e-9395.07Multiprotein-bridging factor 1b OS=Mucuna pruriens... [more]
tr|A0AA86T9F6|A0AA86T9F6_9FABA4.345e-9292.96Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A151RR76|A0A151RR76_CAJCA1.045e-9192.25Multiprotein-bridging factor 1b OS=Cajanus cajan O... [more]
tr|A0A4D6NCX0|A0A4D6NCX0_VIGUN1.870e-9191.55Putative transcription factor OS=Vigna unguiculata... [more]
tr|A0A0S3SB06|A0A0S3SB06_PHAAN7.055e-9193.66HTH cro/C1-type domain-containing protein OS=Vigna... [more]
tr|A0A0L9V547|A0A0L9V547_PHAAN7.055e-9193.66Multiprotein-bridging factor OS=Phaseolus angulari... [more]
tr|A0A1S3VV63|A0A1S3VV63_VIGRR1.059e-9090.14Multiprotein-bridging factor 1b OS=Vigna radiata v... [more]
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BLAST of Cc_v2.0_09855.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q9SJI8|MBF1A_ARATH2.012e-8683.80Multiprotein-bridging factor 1a OS=Arabidopsis tha... [more]
sp|Q9LXT3|MBF1B_ARATH3.061e-8480.99Multiprotein-bridging factor 1b OS=Arabidopsis tha... [more]
sp|Q9LV58|MBF1C_ARATH1.457e-4349.64Multiprotein-bridging factor 1c OS=Arabidopsis tha... [more]
sp|Q6GPQ6|EDF1_XENLA4.648e-4354.89Endothelial differentiation-related factor 1 homol... [more]
sp|O60869|EDF1_HUMAN5.179e-4255.64Endothelial differentiation-related factor 1 OS=Ho... [more]
sp|Q3T0V7|EDF1_BOVIN5.179e-4255.64Endothelial differentiation-related factor 1 OS=Bo... [more]
sp|Q5ZMC0|EDF1_CHICK7.927e-4254.89Endothelial differentiation-related factor 1 homol... [more]
sp|P69736|EDF1_RAT2.577e-4154.89Endothelial differentiation-related factor 1 OS=Ra... [more]
sp|Q9JMG1|EDF1_MOUSE2.577e-4154.89Endothelial differentiation-related factor 1 OS=Mu... [more]
sp|Q6PBY3|EDF1_DANRE5.811e-4152.27Endothelial differentiation-related factor 1 homol... [more]
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BLAST of Cc_v2.0_09855.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
|2.104e-8783.80Symbols: MBF1A, ATMBF1A | ARABIDOPSIS THALIANA MUL... [more]
|3.199e-8580.99Symbols: MBF1B, ATMBF1B | multiprotein bridging fa... [more]
|1.518e-4449.64Symbols: MBF1C, ATMBF1C | multiprotein bridging fa... [more]
|9.774e-1842.70Symbols: MBF1C, ATMBF1C | multiprotein bridging fa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:1.10.260.40:FF:000018coord: 71..142
e-value: 4.7E-39
score: 133.8
NoneNo IPR availablePANTHERPTHR10245ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1coord: 7..141
IPR001387Cro/C1-type helix-turn-helix domainPFAMPF01381HTH_3coord: 88..138
e-value: 1.5E-8
score: 45.8
IPR001387Cro/C1-type helix-turn-helix domainPROSITEPS50943HTH_CROC1coord: 89..141
score: 12.358723
IPR001387Cro/C1-type helix-turn-helix domainCDDcd00093HTH_XREcoord: 85..135
e-value: 4.28988E-9
score: 47.933
IPR010982Lambda repressor-like, DNA-binding domain superfamilyGENE3D1.10.260.40coord: 71..142
e-value: 1.5E-28
score: 100.1
IPR010982Lambda repressor-like, DNA-binding domain superfamilySUPERFAMILY47413lambda repressor-like DNA-binding domainscoord: 81..138
IPR013729Multiprotein bridging factor 1, N-terminalPFAMPF08523MBF1coord: 9..79
e-value: 2.0E-21
score: 87.5

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_09855.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09855.1; Name=Cc_v2.0_09855.1; organism=Cajanus cajan; type=mRNA; length=429bp
ATGTCCGGTGTGGGCCCTATTTCTCAGGATTGGGAACCCGTCGTCCTCCG
CAAGAAACCTCCCACCGCCGCCGCCAAGAAGGACGAGAAAGCCGTCAACG
CCGCCCGCCGCTCCGGCGCCGAAATCGAAACCCTCAAAAAATATAATGCT
GGGACAAATAAAGCAGCCTCTAGCAGCACTTCCTTGAACACTAAGAGGCT
GGACGAGGATACAGAGAATCTAGCTCATGAGAAGGTACCGACTGAACTTA
AGAAGGCTGTAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAG
CTTGCTCAACTGATCAACGAGAAGCCTCAAGTGATCCAGGAGTATGAGTC
AGGGAAGGCCATTCCAAACCAGCAGATAATTGGCAAGTTGGAAAGAGCCT
TAGGGGCTAAACTGCGTGGCAAGAAATAA
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_09855.1

>drCajCajn.Asha.2.0.Cc_v2.0_09855.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09855.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_09855.1; organism=Cajanus cajan; type=polypeptide; length=142bp
MSGVGPISQDWEPVVLRKKPPTAAAKKDEKAVNAARRSGAEIETLKKYNA
GTNKAASSSTSLNTKRLDEDTENLAHEKVPTELKKAVMQARMDKKLTQAQ
LAQLINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK
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mRNA from alignment at CcLG04_v2.0:14384408..14387715+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_09855.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09855.1; Name=Cc_v2.0_09855.1; organism=Cajanus cajan; type=mRNA; length=3308bp; location=Sequence derived from: CcLG04_v2.0:14384408..14387715+ (Cajanus cajan
AAAAAAAGGTAGCAACTGTGCTTTGTTGGCTTCGAGATTTTGGATAAGGA
ATTAAGAAAGAAAATAATTTTCCGAAGCAATCTGAATCTCATCTCATCTT
CCATTTCCATCATCTTCAATTTCTTCGCCAACGAACCCTAACCATGTCCG
GTGTGGGCCCTATTTCTCAGGATTGGGAACCCGTCGTCCTCCGCAAGAAA
CCTCCCACCGCCGCCGCCAAGAAGGACGAGAAAGCCGTCAACGCCGCCCG
CCGCTCCGGCGCCGAAATCGAAACCCTCAAAAAATGTCCGTTCCCAAAAC
CTTCAACCATCAAATAGATTATGTTGTTCATCGCGTGTTAATTATTTCGC
TAATCTGTATTTCCTCTAACGAATTCATCAATTTGTTGTCCTTGTCCGCA
TCTTTTAAATCTCGGATCTGAACGTGTTTTCTTGTGATTATTGCAGCTCG
CTTTGATGATTTGGTGTTGAGGCAGCAGATTTAATTTGCAAATTAAATCT
TTTAAAGGGTTAGGAAAAAAATTGAATTTGATAATTGTTTAGTTTGGAAA
AAAAAAAAGGGGTTCTTAAAACAAGAGCTAAATGATTTCTCATAGAGTGG
TTACGGATGTGTTTTTTTGTGCGTGCTTGTTTTTATCTTTATTTGTTGAT
AAGCTTTATTCTTTGGGTGGTTTTTCAGTGGTGATTGTTCAATTGTTGGT
GTGACAGATAATGCTGGGACAAATAAAGCAGCCTCTAGCAGCACTTCCTT
GAACACTAAGAGGCTGGACGAGGATACAGAGAATCTAGCTCGTGAGTATT
ACACCATATAGATAGAGAACTAGTTTATTTTTTTCACGTTTTCTACCATT
GAAAGAACCTGAGTGTTAGGTGCATATGCTTTTTAAAGGATTAAATGAGT
TTTAGTCTTTTAACTTTTGTCAATTTTTTTTAGTCCCTGCAAATTTTTTA
TATGAACAAAAAAATTTGATGTCATAGGCCAAAATGTTAACGGGAGAaaa
attcaaggactaaaaagtgaaaatccacaaaagttcgaaaattaaaatta
acaaaattTTGTACAGGGACTAAAAACAAAAGTCGACAAAAGTTCATGGA
CTAAAAACATAGATGAATTATGTATTGTCTTTGGACTTTTACTAAATTAT
GGAGGTTCTATCGTTTTTGTGATTAGTAATAATCTAATGGATAGATTGAA
GCATTTGAATTGAGCTGGAGGTACGACTGTCTCACCATCATGATAACTAA
AAATGTACTACctccatcccaatatataatgccctttttacttttttgcc
tgtccctttttgtaagacccttttctaattgtcacttgtattaatatatc
ttctttaaaatatccttatttaattaacaattttttgaaacaaaagatta
taaatatttgaaattaattggatagaaattctctcgaattaggattggag
aagataaataaacacatagatatctctctcttccaatgttaattaattag
gtgagaaatgattaaatagaaagagtgaatgttacttttggaaaagtagt
ttaaattattgacaaatttaatgctcttaactatattaactaattttctt
aaagggtataatttagttgaaagataattagggacaaaggtagtatTTAC
AAGTTTCAACTGTTAGCTTTTGGAGTTTTATGACAAAATGCTTGGTGGTG
TTAATTATTATAGATGTTATATAGAATCATTCATGCATCTTCACAAAACA
ACTTACCATTTTGGGGTAATTGGTTTTTGACATGGTATGTATCAAAACCT
CTATGACCAAGTGATCTAGAGTTTGATTCTTGCTGTTCTCATTCTTCTAA
TAAAAAGTTGAATTTCTGCTCAAGGTAAGGGAGCTGATCATGAATCATGT
TTAAAACTCGGATCTTTCGTGAGGGTGTGTTATAGATATGATAGCAAATC
ATTAATGTATATTCACCTAATAGCTATAAAACATTTATATAATTCACCTA
ATAGCTTAAGCTTTTGAGATAGTTCATGACATTATTAAATATCGAGTTTT
AACATAATCGCTAGGAAATTCATAATCTTTTGGTAGGTTTTAGTTTTATT
TTCTTGTTTGATTTAGTCACTAAAATTTAAGTTATGGAAATCGATGTTAG
TTCTTTATCCTAAGCACAAATAAGAAAATGTATGTGTAACATGTTAGAGA
AATGATGACGTAGATAACTAGATTCAAATATGAGGAGAAAATTTATGATA
CTAACCCCCTCCCCTTGTCCCCCAAACAAAATATAGATTTTTTTGAAAAG
GGATTCACCCCTTTATTGCACTGTATACCGCTTTTAAGTTGAATGATACT
AGTTTTTCAAAATTTACCATTATAATTTGAGTTGTGCATGCATTATGTTT
CTCATCATTCACTTGATATGCTCCTATATGTATTTTGAGTAGATGAATCT
TTTTCTTTTCTTTTGCTTCTGCTTGATAAGATGTGGGACTGCTCTGGGTC
ACAGGTCATTAATTATGTATAGGTTTTTGATAATAAAAAAAAAATCCCTG
GGCTTTGATGAGCATACACATGGTTGGGCCTGGTACTCTCTTGGTTTTCA
TTTGTTTCTGATTTTGCATTCAATAGTATCATACTCTGTTTAATAGATGG
GAGAATTATGGCAAGCAGTAGCACTATTGTTATTCCAGTTTTAGATTTCT
TAAACCAAAATTAAAGCATCTGATGCATTTTCTGTCTCATCTTGAGGATA
TTGTTTTTAACTTTTACTATTAAATATTCTTTAATGGCATCTCTTCCTAC
CTTGGTGCACATATGATGTGACTGGACTTTTGTGTGCAGATGAGAAGGTA
CCGACTGAACTTAAGAAGGCTGTAATGCAAGCTAGGATGGACAAGAAACT
CACTCAGGCTCAGCTTGCTCAAGTATTGCTCTACCCCTAGCAGAAACAAA
ATTGAATATATTATTGAGCTCATTATTTTCAAATTATTACTTAGGCATTA
TGAATGATGTGCATTGTTACTTGCAGCTGATCAACGAGAAGCCTCAAGTG
ATCCAGGAGTATGAGTCAGGGAAGGCCATTCCAAACCAGCAGATAATTGG
CAAGTTGGAAAGAGCCTTAGGGGCTAAACTGCGTGGCAAGAAATAAGGAA
CCTAATGTCATGGTTGTGCTTGTAGTTTGGTTTGCATGATATGGGAGTGG
ATTGTGTTTGCTCGTTAAATGTGTATATGTAAGACAGATAAATGGTTGTG
AGGATCTGTGGCTTTCACTTGTTCGAATAAATAAAATTGCATTTTCATTA
TAAATCCT
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Coding sequence (CDS) from alignment at CcLG04_v2.0:14384408..14387715+

>drCajCajn.Asha.2.0.Cc_v2.0_09855.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09855.1; Name=Cc_v2.0_09855.1; organism=Cajanus cajan; type=CDS; length=429bp; location=Sequence derived from: CcLG04_v2.0:14384408..14387715+ (Cajanus cajan
ATGTCCGGTGTGGGCCCTATTTCTCAGGATTGGGAACCCGTCGTCCTCCG
CAAGAAACCTCCCACCGCCGCCGCCAAGAAGGACGAGAAAGCCGTCAACG
CCGCCCGCCGCTCCGGCGCCGAAATCGAAACCCTCAAAAAATATAATGCT
GGGACAAATAAAGCAGCCTCTAGCAGCACTTCCTTGAACACTAAGAGGCT
GGACGAGGATACAGAGAATCTAGCTCATGAGAAGGTACCGACTGAACTTA
AGAAGGCTGTAATGCAAGCTAGGATGGACAAGAAACTCACTCAGGCTCAG
CTTGCTCAACTGATCAACGAGAAGCCTCAAGTGATCCAGGAGTATGAGTC
AGGGAAGGCCATTCCAAACCAGCAGATAATTGGCAAGTTGGAAAGAGCCT
TAGGGGCTAAACTGCGTGGCAAGAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001387Cro/C1-type_HTH
IPR010982Lambda_DNA-bd_dom_sf
IPR013729MBF1_N
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding