Cc_v2.0_09884.1

Transcript Overview
NameCc_v2.0_09884.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_09884.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length549
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG04_v2.0chromosomeCcLG04_v2.0:15158677..15163357 +Cajanus cajan cv. Asha genome v2.0n/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_09884drCajCajn.Asha.2.0.Cc_v2.0_09884Cajanus cajangene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_09884.1drCajCajn.Asha.2.0.cds.Cc_v2.0_09884.1Cajanus cajanCDS
cds.Cc_v2.0_09884.1drCajCajn.Asha.2.0.cds.Cc_v2.0_09884.1_2Cajanus cajanCDS
cds.Cc_v2.0_09884.1drCajCajn.Asha.2.0.cds.Cc_v2.0_09884.1_3Cajanus cajanCDS
cds.Cc_v2.0_09884.1drCajCajn.Asha.2.0.cds.Cc_v2.0_09884.1_4Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_09884.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_09884.1.exon1Cajanus cajanexon
Cc_v2.0_09884.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_09884.1.exon2Cajanus cajanexon
Cc_v2.0_09884.1.exon3drCajCajn.Asha.2.0.Cc_v2.0_09884.1.exon3Cajanus cajanexon
Cc_v2.0_09884.1.exon4drCajCajn.Asha.2.0.Cc_v2.0_09884.1.exon4Cajanus cajanexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_09884.1.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_09884.1.utr3p1Cajanus cajanthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_09884.1drCajCajn.Asha.2.0.Cc_v2.0_09884.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_09884.1drCajCajn.Asha.2.0.Cc_v2.0_09884.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_09884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151SKC7|A0A151SKC7_CAJCA (Cyclic nucleotide-gated ion channel 4 OS=Cajanus cajan OX=3821 GN=KK1_001513 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.315e-41
Identity = 72/74 (97.30%), Postives = 73/74 (98.65%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASH +
Sbjct:  192 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAA 265
[Close]
BLAST of Cc_v2.0_09884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2SSJ6|A0A0B2SSJ6_GLYSO (Cyclic nucleotide-gated ion channel 4 OS=Glycine soja OX=3848 GN=glysoja_036617 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 4.120e-40
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            IVLWVAIPSLLEKGSV LVMTVFLIIFLFQYLPKI+HSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASH +
Sbjct:   89 IVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAA 162
[Close]
BLAST of Cc_v2.0_09884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KFF7|A0A445KFF7_GLYSO (Cyclic nucleotide-gated ion channel 4 OS=Glycine soja OX=3848 GN=D0Y65_015945 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.165e-40
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            IVLWVAIPSLLEKGSV LVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASH +
Sbjct:  199 IVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAA 272
[Close]
BLAST of Cc_v2.0_09884.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1KEI2|I1KEI2_SOYBN (Cyclic nucleotide-binding domain-containing protein OS=Glycine max OX=3847 GN=100796761 PE=3 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 4.165e-40
Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            IVLWVAIPSLLEKGSV LVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASH +
Sbjct:  199 IVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAA 272
[Close]
BLAST of Cc_v2.0_09884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6LFV5|A0A4D6LFV5_VIGUN (Cyclic nucleotide gated channel OS=Vigna unguiculata OX=3917 GN=DEO72_LG3g1924 PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.313e-40
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            IVLWVAIPSLLEKGSV LVMTVFLIIFLFQYLPKI+HSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASH +
Sbjct:  187 IVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAA 260
[Close]
BLAST of Cc_v2.0_09884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA87B974|A0AA87B974_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS30953 PE=4 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 8.600e-40
Identity = 70/72 (97.22%), Postives = 71/72 (98.61%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASH 170
            IVLWVAIPSLLEKGSV LVMTVFLIIFLFQYLPKI+HSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASH
Sbjct:  187 IVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASH 258
[Close]
BLAST of Cc_v2.0_09884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TJQ3|A0A1S3TJQ3_VIGRR (Cyclic nucleotide-gated ion channel 4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106756202 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.901e-40
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            IVLWVAIPSLLEKGSV LVMTVFLIIFLFQYLPKI+HSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASH +
Sbjct:  183 IVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAA 256
[Close]
BLAST of Cc_v2.0_09884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9V4W4|A0A0L9V4W4_PHAAN (Cyclic nucleotide-gated ion channel 4 OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0246010 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.611e-40
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            IVLWVAIPSLLEKGSV LVMTVFLIIFLFQYLPKI+HSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASH +
Sbjct:  187 IVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAA 260
[Close]
BLAST of Cc_v2.0_09884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445HPZ5|A0A445HPZ5_GLYSO (Cyclic nucleotide-gated ion channel 4 isoform A OS=Glycine soja OX=3848 GN=D0Y65_034252 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.062e-39
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            IVLWVAIPSLLEKGSV LVMTVFLIIFLFQYLPKI+HSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASH +
Sbjct:  198 IVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAA 271
[Close]
BLAST of Cc_v2.0_09884.1 vs. ExPASy TrEMBL (2024)
Match: tr|K7LUJ8|K7LUJ8_SOYBN (Cyclic nucleotide-binding domain-containing protein OS=Glycine max OX=3847 GN=100783341 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.062e-39
Identity = 70/74 (94.59%), Postives = 72/74 (97.30%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            IVLWVAIPSLLEKGSV LVMTVFLIIFLFQYLPKI+HSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASH +
Sbjct:  198 IVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAA 271
[Close]
BLAST of Cc_v2.0_09884.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q94AS9|CNGC4_ARATH (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana OX=3702 GN=CNGC4 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 7.863e-28
Identity = 55/74 (74.32%), Postives = 65/74 (87.84%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            +VLWV IPSLL++GSV LV++V L+ FLFQYLPKI+HS+ HLRR   LSGYIFGTVWWGIALNMIAYFVA+H +
Sbjct:  202 VVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGYIFGTVWWGIALNMIAYFVAAHAA 275
[Close]
BLAST of Cc_v2.0_09884.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O65718|CNGC2_ARATH (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana OX=3702 GN=CNGC2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.774e-19
Identity = 43/73 (58.90%), Postives = 60/73 (82.19%), Query Frame = 0 
Query:  100 VLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            V W+ +P L+ +  V L+MT+ L+IFLFQ+LPKI+H +C +RR Q ++GYIFGT+WWG ALN+IAYF+ASHV+
Sbjct:  235 VFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVTGYIFGTIWWGFALNLIAYFIASHVA 307
[Close]
BLAST of Cc_v2.0_09884.1 vs. Araport11
Match: | (Symbols: DND2, HLM1, ATCNGC4, CNGC4 | cyclic nucleotide-gated cation channel 4, "DEFENSE, NO DEATH 2" | chr5:22025684-22029971 REVERSE LENGTH=694)

HSP 1 Score: 112.464 bits (280), Expect = 7.954e-29
Identity = 55/74 (74.32%), Postives = 65/74 (87.84%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            +VLWV IPSLL++GSV LV++V L+ FLFQYLPKI+HS+ HLRR   LSGYIFGTVWWGIALNMIAYFVA+H +
Sbjct:  202 VVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGYIFGTVWWGIALNMIAYFVAAHAA 275
[Close]
BLAST of Cc_v2.0_09884.1 vs. Araport11
Match: | (Symbols: DND2, HLM1, ATCNGC4, CNGC4 | cyclic nucleotide-gated cation channel 4, "DEFENSE, NO DEATH 2" | chr5:22025684-22029971 REVERSE LENGTH=694)

HSP 1 Score: 112.464 bits (280), Expect = 7.954e-29
Identity = 55/74 (74.32%), Postives = 65/74 (87.84%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            +VLWV IPSLL++GSV LV++V L+ FLFQYLPKI+HS+ HLRR   LSGYIFGTVWWGIALNMIAYFVA+H +
Sbjct:  202 VVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGYIFGTVWWGIALNMIAYFVAAHAA 275
[Close]
BLAST of Cc_v2.0_09884.1 vs. Araport11
Match: | (Symbols: DND2, HLM1, ATCNGC4, CNGC4 | cyclic nucleotide-gated cation channel 4, "DEFENSE, NO DEATH 2" | chr5:22025684-22029971 REVERSE LENGTH=694)

HSP 1 Score: 112.464 bits (280), Expect = 7.954e-29
Identity = 55/74 (74.32%), Postives = 65/74 (87.84%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            +VLWV IPSLL++GSV LV++V L+ FLFQYLPKI+HS+ HLRR   LSGYIFGTVWWGIALNMIAYFVA+H +
Sbjct:  202 VVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGYIFGTVWWGIALNMIAYFVAAHAA 275
[Close]
BLAST of Cc_v2.0_09884.1 vs. Araport11
Match: | (Symbols: DND2, HLM1, ATCNGC4, CNGC4 | cyclic nucleotide-gated cation channel 4, "DEFENSE, NO DEATH 2" | chr5:22025684-22029971 REVERSE LENGTH=689)

HSP 1 Score: 112.079 bits (279), Expect = 8.396e-29
Identity = 55/74 (74.32%), Postives = 65/74 (87.84%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            +VLWV IPSLL++GSV LV++V L+ FLFQYLPKI+HS+ HLRR   LSGYIFGTVWWGIALNMIAYFVA+H +
Sbjct:  202 VVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGYIFGTVWWGIALNMIAYFVAAHAA 275
[Close]
BLAST of Cc_v2.0_09884.1 vs. Araport11
Match: | (Symbols: CNGC2, DND1, ATCNGC2 | CYCLIC NUCLEOTIDE GATED CHANNEL 2, DEFENSE NO DEATH 1, CYCLIC NUCLEOTIDE-GATED CHANNEL 2 | chr5:5003460-5006512 REVERSE LENGTH=725)

HSP 1 Score: 87.4261 bits (215), Expect = 3.431e-20
Identity = 43/73 (58.90%), Postives = 60/73 (82.19%), Query Frame = 0 
Query:  100 VLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            V W+ +P L+ +  V L+MT+ L+IFLFQ+LPKI+H +C +RR Q ++GYIFGT+WWG ALN+IAYF+ASHV+
Sbjct:  234 VFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVTGYIFGTIWWGFALNLIAYFIASHVA 306
[Close]
BLAST of Cc_v2.0_09884.1 vs. Araport11
Match: | (Symbols: CNGC2, DND1, ATCNGC2 | CYCLIC NUCLEOTIDE GATED CHANNEL 2, DEFENSE NO DEATH 1, CYCLIC NUCLEOTIDE-GATED CHANNEL 2 | chr5:5003460-5006763 REVERSE LENGTH=726)

HSP 1 Score: 87.4261 bits (215), Expect = 3.815e-20
Identity = 43/73 (58.90%), Postives = 60/73 (82.19%), Query Frame = 0 
Query:  100 VLWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHVS 172
            V W+ +P L+ +  V L+MT+ L+IFLFQ+LPKI+H +C +RR Q ++GYIFGT+WWG ALN+IAYF+ASHV+
Sbjct:  235 VFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKVTGYIFGTIWWGFALNLIAYFIASHVA 307
[Close]
BLAST of Cc_v2.0_09884.1 vs. Araport11
Match: | (Symbols: ATCNGC15, CNGC15 | cyclic nucleotide-gated channel 15 | chr2:12049989-12052453 FORWARD LENGTH=678)

HSP 1 Score: 49.6766 bits (117), Expect = 3.334e-7
Identity = 26/74 (35.14%), Postives = 42/74 (56.76%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVML-VMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHV 171
            +++W+ IP+L  +GS M     V   I +FQY+P++F      R+    +G +  T W G A N++ Y +ASHV
Sbjct:  184 VLIWIIIPNL--RGSPMTNTKNVLRFIIIFQYVPRMFLIFPLSRQIIKATGVVTETAWAGAAYNLMLYMLASHV 255
[Close]
BLAST of Cc_v2.0_09884.1 vs. Araport11
Match: | (Symbols: ATCNGC15, CNGC15 | cyclic nucleotide-gated channel 15 | chr2:12050186-12052453 FORWARD LENGTH=638)

HSP 1 Score: 49.6766 bits (117), Expect = 3.726e-7
Identity = 26/74 (35.14%), Postives = 42/74 (56.76%), Query Frame = 0 
Query:   99 IVLWVAIPSLLEKGSVML-VMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHV 171
            +++W+ IP+L  +GS M     V   I +FQY+P++F      R+    +G +  T W G A N++ Y +ASHV
Sbjct:  144 VLIWIIIPNL--RGSPMTNTKNVLRFIIIFQYVPRMFLIFPLSRQIIKATGVVTETAWAGAAYNLMLYMLASHV 215
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_09884.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151SKC7|A0A151SKC7_CAJCA1.315e-4197.30Cyclic nucleotide-gated ion channel 4 OS=Cajanus c... [more]
tr|A0A0B2SSJ6|A0A0B2SSJ6_GLYSO4.120e-4094.59Cyclic nucleotide-gated ion channel 4 OS=Glycine s... [more]
tr|A0A445KFF7|A0A445KFF7_GLYSO4.165e-4095.95Cyclic nucleotide-gated ion channel 4 OS=Glycine s... [more]
tr|I1KEI2|I1KEI2_SOYBN4.165e-4095.95Cyclic nucleotide-binding domain-containing protei... [more]
tr|A0A4D6LFV5|A0A4D6LFV5_VIGUN5.313e-4094.59Cyclic nucleotide gated channel OS=Vigna unguicula... [more]
tr|A0AA87B974|A0AA87B974_9FABA8.600e-4097.22Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A1S3TJQ3|A0A1S3TJQ3_VIGRR8.901e-4094.59Cyclic nucleotide-gated ion channel 4 OS=Vigna rad... [more]
tr|A0A0L9V4W4|A0A0L9V4W4_PHAAN9.611e-4094.59Cyclic nucleotide-gated ion channel 4 OS=Phaseolus... [more]
tr|A0A445HPZ5|A0A445HPZ5_GLYSO1.062e-3994.59Cyclic nucleotide-gated ion channel 4 isoform A OS... [more]
tr|K7LUJ8|K7LUJ8_SOYBN1.062e-3994.59Cyclic nucleotide-binding domain-containing protei... [more]
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BLAST of Cc_v2.0_09884.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 2
Match NameE-valueIdentityDescription
sp|Q94AS9|CNGC4_ARATH7.863e-2874.32Cyclic nucleotide-gated ion channel 4 OS=Arabidops... [more]
sp|O65718|CNGC2_ARATH3.774e-1958.90Cyclic nucleotide-gated ion channel 2 OS=Arabidops... [more]
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BLAST of Cc_v2.0_09884.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 8
Match NameE-valueIdentityDescription
|7.954e-2974.32Symbols: DND2, HLM1, ATCNGC4, CNGC4 | cyclic nucle... [more]
|7.954e-2974.32Symbols: DND2, HLM1, ATCNGC4, CNGC4 | cyclic nucle... [more]
|7.954e-2974.32Symbols: DND2, HLM1, ATCNGC4, CNGC4 | cyclic nucle... [more]
|8.396e-2974.32Symbols: DND2, HLM1, ATCNGC4, CNGC4 | cyclic nucle... [more]
|3.431e-2058.90Symbols: CNGC2, DND1, ATCNGC2 | CYCLIC NUCLEOTIDE ... [more]
|3.815e-2058.90Symbols: CNGC2, DND1, ATCNGC2 | CYCLIC NUCLEOTIDE ... [more]
|3.334e-735.14Symbols: ATCNGC15, CNGC15 | cyclic nucleotide-gate... [more]
|3.726e-735.14Symbols: ATCNGC15, CNGC15 | cyclic nucleotide-gate... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45651CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATEDcoord: 99..171
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_09884.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09884.1; Name=Cc_v2.0_09884.1; organism=Cajanus cajan; type=mRNA; length=549bp
ATGACTTCAGTCAAGATAGCTTTTGTAGCTGTCCTTCTTACTATAATGGC
TTGCAGTGGACTTGGTTTTCAGGGGATACCAAGAATGCCAAACCTTAAGC
AATGTGAAGAACATGATGAATGCAACTTGATATCGGCTAGTTGTGAAGGA
ATACCAATTTGTTATGAGGGTGGTTGCATGTGTTTCCAAAACAAAGGAAT
TGCAGTACGAAATTGTGAAGTAAACAGTCAATATTGCATGTTTTGTTCGG
AGCAATTCATTGGTGGTCATAAGTATTGCAACTCTGATAACATGATTGTG
CTTTGGGTGGCAATCCCCTCCTTGTTGGAGAAAGGTTCAGTTATGTTGGT
GATGACAGTGTTCTTAATTATATTTCTCTTCCAATACCTTCCCAAAATTT
TTCATTCTGTGTGCCATCTTCGACGGACGCAAAACCTCTCTGGCTACATT
TTTGGAACAGTATGGTGGGGAATCGCCCTTAACATGATCGCATATTTTGT
TGCTTCCCATGTAAGTGATCACACCTTGCTTTTCACTCTTAGTTTTTAA
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_09884.1

>drCajCajn.Asha.2.0.Cc_v2.0_09884.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09884.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_09884.1; organism=Cajanus cajan; type=polypeptide; length=182bp
MTSVKIAFVAVLLTIMACSGLGFQGIPRMPNLKQCEEHDECNLISASCEG
IPICYEGGCMCFQNKGIAVRNCEVNSQYCMFCSEQFIGGHKYCNSDNMIV
LWVAIPSLLEKGSVMLVMTVFLIIFLFQYLPKIFHSVCHLRRTQNLSGYI
FGTVWWGIALNMIAYFVASHVSDHTLLFTLSF
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mRNA from alignment at CcLG04_v2.0:15158677..15163357+

Legend: CDSexonpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_09884.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09884.1; Name=Cc_v2.0_09884.1; organism=Cajanus cajan; type=mRNA; length=4681bp; location=Sequence derived from: CcLG04_v2.0:15158677..15163357+ (Cajanus cajan
ATGACTTCAGTCAAGATAGCTTTTGTAGCTGTCCTTCTTACTATAATGGC
TTGCAGTGGTATTTTCCTTGGACATCTTCACCTTTGAATGatttatttat
ttattttctatatttatattatCATTACGAATTATTCATCAAATTTGTCA
TCGATTAATCTTTATCAAGAAATCTAATGGACTACATTTAATATAATAAA
ATCTTTTATTTTATCCATTTTTTTTATCATTAAGATTCAAACTTAAAATT
TTATGGAAAGAAATGAACTTAAATATATCTTTAATTAATGACTTATTAGT
CATGTGTACATATATATATATTTCTAGGAAAGTAACAATATTAATTACTA
AATTCTATGTTTATGTTTTATTTGCAGGACTTGGTTTTCAGGGGATACCA
AGAATGCCAAACCTTAAGCAATGTGAAGAACATGATGAATGCAACTTGAT
ATCGGCTAGTTGTGAAGGAATACCAATTTGTTATGAGGGTGGTTGCATGT
GTTTCCAAAACAAAGGAATTGCAGTACGAAATTGTGAAGTAAACAGTCAA
TGTGAGAAATTTTGCATTCCATCATGTGATACGGCTTATTGTGATGAGAA
AATAAAACAATGTGTATGCCCTTGTAATTAACAAAAGGGACATGTTTGAG
ATTTAATGAATAATGATTGATATATTTAGGAATGATACCATAAATCTATA
ATAATAAGATTAATGATTAATTGGTTTTTTAATTTTATTGAAGTTCATTA
TCTTTATATGTGTAAAAATAGATTTATTTCATATTGACCATATTAGTTTG
TTTTTTTTTAATGTTAAAGGTTTTGTTATTTTGATCCCTTATGATCCAAT
GTGTTTTCATTAGAAGTAAAATTTGTGAATTGAAAATTTATTATGTATAT
AAAGATGTCGTGACATTCTCTAAATGAATATCTTAGAATTTAATTAAATA
AAGACAATTATGTAAATGACATTCGATCCAAACAAAAATAAAGTATTTAA
AGAAAAATTGAAATAAATCTCATTCATTTTCGTAGTGTAAAATAAGGTCA
AATGATCTCAAACATAACAACAATATAAGCATTATATTCAATCATAATCA
AGAGATGTATGTCTAATATTCAAATGGAATTGTGCATGTGGCATCATTTA
AAAAACACATGTCACTCGAAATCTCATAAAGTAGTCTAGAAGTGTAGTCT
AGAAGTATGTACATGTCTATAAAAAAAGTTGTCTAGCCAAAGATGTCTTC
CATCAAACACTCTCACTAAGAGAATAAAGATCCCCAGCGTGTCAAGGTCA
TGTGATCACCCTAGGTCCACCTATACTCACCATAGAGTGTTATTAAGGTT
CCAAAACCAAACGAACCCCCGAGTTATGAATACATTGATCACTAAAGCAC
CTTTTTAACACTAGATTCCACACCTATACCTCAACCTTTTAAAACATTTT
CCAATAACCACAACCTTATAAATGTGCCAAGTTATTGATCATACCATTGA
TAAACAATAATTAATGATATATTATAGTTTAATATCTGTATTGGTTCACT
CTCATCCTTAGAGAGCTACATCTAGTATTCAACAACCCACTAagaattat
gttttgtgatctttataagaattgtaaccataaatgttagtttttcaata
tcgttggaatcacacaaaaaagaagtctaaaactcaagatatgattaaat
tagtgagtagagatcaaattgtcataattaggttgaaatactacgatttt
ttaattcttaaaaatagtagatgatataattaactcttgagatcaacata
taagttgtagataattattttaaatttctaacaaaattaagatcaacttg
atatcatatatatatatatatagctctagatatgacatttggatcacacg
atgtcttagaaggttaagttgtggaaatgtagtttgtaatgaggataatg
aataactttatcctttaagtgttCTAGTAGTGTACCTTTTGAATCCTCTC
TCTTtatatatatatatatatatCGGGTTTAGGCCATATGAGGTCAAATA
ATTAAGTTACGAAAATATAGTTTGTGAGTGGTGATAGTGCATTGTCTTAC
ACTTTAAGTGTTGGATCTTATGAATGATTTTACTCTAATGTTTGATTCTG
ATTGAAGTATTTTAGTGCCATGACTTTGGATCATGATTTATAATATTAAT
Agtacacgctagggtgcatcaggatagcgatgttagccaaattacaacag
gtgcacacaattggaaaaattatagctcccaaagtaattatccccaaggt
catgaattcccaaacttttacaataggtggaccttccctaatgacatatt
ctatacccatcacaaaaataaatgatgcacatgatgcatgtcataccaca
ttctatgcatattcatactcgacacattcatcataacatactcatatagt
atactcatcaattgtatcatatACTTATTAATAACGAAGCAAGTACAAAT
GGCTAGAAAATTTCACTAAGACTTTCACATGACTAAGTTAAACTAAGATT
TCACATTGTATGACCATCACATGATCCACACACACAAGCACATCATGTCA
CCATCAAGTATACATCAATTACAAATTCCTGATATTTAAAGTCAAATCTT
AACCTAGTCATTCAACTCATCATTTAATCATTCTTGTATCACtagtatat
cctcctagtgtaaagtgttgtgatgacttggctcgacatgttctcccaag
ctactcctattgaccttcagacaacaattgacaattgacaattattttac
tagcgctacatgtatgtagcttaggattttactgtgtccattgcattatc
ataaagcataatgagtatatcttaaatgaatgtaaattgtgaatgtgata
tatgtaggaatgtgtaacttttggaagatgcgttgatatctattaatctt
actcccttttcttttgtggttttttggtgtatgcttgtaagtgagattca
tcatgaggatgacgaagccagaaacgaggtctagaccttgtattaatgta
ctttgataggatgtgacattggaaaaatagctaggaatttatgttttcaa
ttaattgttaaagttagacttacttctattGAATTGGTATTAGGTGTTAA
TTATTATTTTGTTGTAATAACcaatgcttttaaaattggaccgattatta
aattggtctaagcacttattcaagattcaattgttcaatatcgtgatcaa
attaatattaataaaattattattattattattattgaAGAAGCTACCCC
AGAAAAAAAAGTCGATGTTTTTATTTTTGTGTCAAACTTTTGAATTGTGA
ATGTGTTTTCATTTTCCATTTTAGTTGTTTGCACTGTAGCAAAGGAAAAT
TTGAAGAGAGGATTTTGTCATTATTATTAGAAGCTAACACACGGCACTTA
TATGATATGTTCTGATCTGCATAACATGCGTTGCTTGTTGTTTGAAATTA
CATTGAAAAAGAAAACAAGGAACAGCAAAACATGTTGCAGTCTGTTACAT
CAAACCATGATGGGAGCCACAGTTTTAGATGCAGCCAATTTGATTCTTGT
CTGATCAGAATTTCATATGGCATGTATATGCATAGCGTGGTCCCCTAAAA
ATCTGTACAAGATTGCATGTTTTGTTCGGAGCAATTCATTGGTGGTCATA
AGTATTGCAACTCTGATAACATGGTACATATATATGTCATTTGGCTTTTG
TTCATTATTCAATGTTTGATCTTAATTTTTTTAAGAACTTACCTATACAT
GAGGAGAAAAAAGGAGGAGGGCCAGGGAAAAGTATTGCtaaacataaaaa
taattaaaatatatatatatatatatatctatGGACTATGGCATTAAATG
AGAAACAACCAAAAAAGAATTGAAATGATTCAAGTAGTGATAGACTCGAT
CGAAACCTTTAAAACGGTGGTTAGAAAATTGAGGACTGTACTGCTCGAGG
CGTCACACCATCGACCCAATGGTTGATCGGCAATTATTCAATTTGGAGAA
TATTCTTTAGTTTGAGGGATTGTGTACCATTCAAGTTGTCATGACCATAA
TATTTTGTTTTAAAAGGAAATGATCGATGTATTATCATTAAATTTATATA
TTATTTATGGATATATAAAACCTAGCTTAATTTGGATTTGATTATATTGA
ATGAGGAATTTAAAAATTTATATGGTTTTCAGATTGTGCTTTGGGTGGCA
ATCCCCTCCTTGTTGGAGAAAGGTTCAGTTATGTTGGTGATGACAGTGTT
CTTAATTATATTTCTCTTCCAATACCTTCCCAAAATTTTTCATTCTGTGT
GCCATCTTCGACGGACGCAAAACCTCTCTGGCTACATTTTTGGAACAGTA
TGGTGGGGAATCGCCCTTAACATGATCGCATATTTTGTTGCTTCCCATGT
AAGTGATCACACCTTGCTTTTCACTCTTAGTTTTTAATTGACTTCATGCA
TTTTGAACTTGCCTTCTAAAATCAACATGATCAACATATAATCTTCTTCC
CTTACACTTTTTAATATCATTAAACTGTCCAAAATTTTGGATTAATATCA
ATAAAGCTATGATTATGGAGAAAAAAGAAGAATAAAGGGATAATTGAATC
AAAAGGAGGTTTATTGATGTAAAAAAGAAGA
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Coding sequence (CDS) from alignment at CcLG04_v2.0:15158677..15163357+

>drCajCajn.Asha.2.0.Cc_v2.0_09884.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09884.1; Name=Cc_v2.0_09884.1; organism=Cajanus cajan; type=CDS; length=549bp; location=Sequence derived from: CcLG04_v2.0:15158677..15163357+ (Cajanus cajan
ATGACTTCAGTCAAGATAGCTTTTGTAGCTGTCCTTCTTACTATAATGGC
TTGCAGTGGACTTGGTTTTCAGGGGATACCAAGAATGCCAAACCTTAAGC
AATGTGAAGAACATGATGAATGCAACTTGATATCGGCTAGTTGTGAAGGA
ATACCAATTTGTTATGAGGGTGGTTGCATGTGTTTCCAAAACAAAGGAAT
TGCAGTACGAAATTGTGAAGTAAACAGTCAATATTGCATGTTTTGTTCGG
AGCAATTCATTGGTGGTCATAAGTATTGCAACTCTGATAACATGATTGTG
CTTTGGGTGGCAATCCCCTCCTTGTTGGAGAAAGGTTCAGTTATGTTGGT
GATGACAGTGTTCTTAATTATATTTCTCTTCCAATACCTTCCCAAAATTT
TTCATTCTGTGTGCCATCTTCGACGGACGCAAAACCTCTCTGGCTACATT
TTTGGAACAGTATGGTGGGGAATCGCCCTTAACATGATCGCATATTTTGT
TGCTTCCCATGTAAGTGATCACACCTTGCTTTTCACTCTTAGTTTTTAA
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