Cc_v2.0_09902.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cc_v2.0_09902.1 vs. ExPASy TrEMBL (2024)
Match: tr|K7LUL2|K7LUL2_SOYBN (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_12G135500 PE=4 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 5.906e-72 Identity = 131/194 (67.53%), Postives = 143/194 (73.71%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMESL-----------------------------------------MMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
P IPNKSLNEIKSVLVS LASHGQLSEALLVYEEIKKAG+NL PKAVI+LIEE T+FNGELDGLLLLL+E+SDLDYWVDGCFKVIMYCIR KNLSSAI+L KQLKDKF+NDEIV E+L ++ +CANAGDLNNARLIWREYE+AGFPYNV YLR
Sbjct: 23 PIIPNKSLNEIKSVLVSALASHGQLSEALLVYEEIKKAGHNLRPKAVITLIEELTKFNGELDGLLLLLEEISDLDYWVDGCFKVIMYCIRNKNLSSAIVLFKQLKDKFKNDEIVTEALFDAVFSLIAVSEFTHLQIGLDLLWAIKDELGLMASRQCLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLR 216
BLAST of Cc_v2.0_09902.1 vs. ExPASy TrEMBL (2024)
Match: tr|K7LUK9|K7LUK9_SOYBN (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_12G135500 PE=4 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 3.721e-71 Identity = 131/194 (67.53%), Postives = 143/194 (73.71%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMESL-----------------------------------------MMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
P IPNKSLNEIKSVLVS LASHGQLSEALLVYEEIKKAG+NL PKAVI+LIEE T+FNGELDGLLLLL+E+SDLDYWVDGCFKVIMYCIR KNLSSAI+L KQLKDKF+NDEIV E+L ++ +CANAGDLNNARLIWREYE+AGFPYNV YLR
Sbjct: 23 PIIPNKSLNEIKSVLVSALASHGQLSEALLVYEEIKKAGHNLRPKAVITLIEELTKFNGELDGLLLLLEEISDLDYWVDGCFKVIMYCIRNKNLSSAIVLFKQLKDKFKNDEIVTEALFDAVFSLIAVSEFTHLQIGLDLLWAIKDELGLMASRQCLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLR 216
BLAST of Cc_v2.0_09902.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9C6WH24|A0A9C6WH24_ARADU (Pentatricopeptide repeat-containing protein At4g04790, mitochondrial isoform X2 OS=Arachis duranensis OX=130453 GN=LOC107477993 PE=4 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 6.914e-71 Identity = 122/194 (62.89%), Postives = 139/194 (71.65%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMESL-----------------------------------------MMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
P+IP KSLNEIKSVLVS LASHGQLSEALLVYEEI KAGYNLEPKAVISLIEEFT+F GELDG+L+LL E+SDLDYWVDGCF+VI+YCI K+LSSAI L K+LKDKFE+DE+V+E L ++ +C NAGDL+NARLIWREYE+AGFPYNV YLR
Sbjct: 333 PNIPAKSLNEIKSVLVSALASHGQLSEALLVYEEINKAGYNLEPKAVISLIEEFTKFKGELDGMLMLLTELSDLDYWVDGCFRVIIYCIHNKHLSSAIDLFKKLKDKFESDELVLEVLFDEVFAAIATSESSNLQIGLDLLWAVKNELGLVPSRQCLDFLLSACTNAGDLSNARLIWREYEVAGFPYNVLSYLR 526
BLAST of Cc_v2.0_09902.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2SNY7|A0A0B2SNY7_GLYSO (Pentatricopeptide repeat-containing protein, mitochondrial OS=Glycine soja OX=3848 GN=glysoja_032645 PE=4 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 1.350e-70 Identity = 129/193 (66.84%), Postives = 145/193 (75.13%), Query Frame = 0 Query: 8 DIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMESL-----------------------------------------MMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
+IPNKSLNEIKSVLVS LASHGQLSEALLVYEEIKKAG+NLEPKAVI+LIEEFT+FNGELDGLLLLL+E++D+DYWVDGCFKVIMYCIR KNLSS ILL KQLKDKF+ND++VME+L ++ +CANAGDLNNARLIWREYE+AGFPYNV YLR
Sbjct: 45 NIPNKSLNEIKSVLVSALASHGQLSEALLVYEEIKKAGHNLEPKAVITLIEEFTKFNGELDGLLLLLEEMNDVDYWVDGCFKVIMYCIRNKNLSSTILLFKQLKDKFKNDDLVMEALFDAVFSLIASSESSHLQIGLDLLWAIKDELGLMPSRQCLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLR 237
BLAST of Cc_v2.0_09902.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6TMM3|C6TMM3_SOYBN (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 1.661e-69 Identity = 131/194 (67.53%), Postives = 143/194 (73.71%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMESL-----------------------------------------MMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
P IPNKSLNEIKSVLVS LASHGQLSEALLVYEEIKKAG+NL PKAVI+LIEE T+FNGELDGLLLLL+E+SDLDYWVDGCFKVIMYCIR KNLSSAI+L KQLKDKF+NDEIV E+L ++ +CANAGDLNNARLIWREYE+AGFPYNV YLR
Sbjct: 173 PIIPNKSLNEIKSVLVSALASHGQLSEALLVYEEIKKAGHNLRPKAVITLIEELTKFNGELDGLLLLLEEISDLDYWVDGCFKVIMYCIRNKNLSSAIVLFKQLKDKFKNDEIVTEALFDAVFSLIAVSEFTHLQIGLDLLWAIKDELGLMASRQCLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLR 366
BLAST of Cc_v2.0_09902.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P4CLG0|A0A6P4CLG0_ARADU (Pentatricopeptide repeat-containing protein At4g04790, mitochondrial isoform X1 OS=Arachis duranensis OX=130453 GN=LOC107477993 PE=4 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 1.737e-69 Identity = 122/194 (62.89%), Postives = 139/194 (71.65%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMESL-----------------------------------------MMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
P+IP KSLNEIKSVLVS LASHGQLSEALLVYEEI KAGYNLEPKAVISLIEEFT+F GELDG+L+LL E+SDLDYWVDGCF+VI+YCI K+LSSAI L K+LKDKFE+DE+V+E L ++ +C NAGDL+NARLIWREYE+AGFPYNV YLR
Sbjct: 490 PNIPAKSLNEIKSVLVSALASHGQLSEALLVYEEINKAGYNLEPKAVISLIEEFTKFKGELDGMLMLLTELSDLDYWVDGCFRVIIYCIHNKHLSSAIDLFKKLKDKFESDELVLEVLFDEVFAAIATSESSNLQIGLDLLWAVKNELGLVPSRQCLDFLLSACTNAGDLSNARLIWREYEVAGFPYNVLSYLR 683
BLAST of Cc_v2.0_09902.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445DZ66|A0A445DZ66_ARAHY (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A03g014995 PE=4 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.419e-69 Identity = 122/194 (62.89%), Postives = 139/194 (71.65%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMESL-----------------------------------------MMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
P+IP KSLNEIKSVLVS LASHGQLSEALLVYEEI KAGYNLEPKAVISLIEEFT+F GELDG+L+LL E+SDLDYWVDGCF+VI+YCI K+LSSAI L K+LKDKFE+DE+V+E L ++ +C NAGDL+NARLIWREYE+AGFPYNV YLR
Sbjct: 592 PNIPAKSLNEIKSVLVSALASHGQLSEALLVYEEINKAGYNLEPKAVISLIEEFTKFKGELDGMLMLLTELSDLDYWVDGCFRVIIYCIHNKHLSSAIDLFKKLKDKFESDELVLEVLFDEVFAAIATSESSNLQIGLDLLWAVKNELGLVPSRQCLDFLLSACTNAGDLSNARLIWREYEVAGFPYNVLSYLR 785
BLAST of Cc_v2.0_09902.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445A4C6|A0A445A4C6_ARAHY (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_B03g066549 PE=4 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.898e-69 Identity = 121/194 (62.37%), Postives = 139/194 (71.65%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMESL-----------------------------------------MMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
P+IP KSLNEIKSVLVS LASHGQLSEALLVYEEI KAGYNLEPKAVISLIEEFT+F GELDG+L+LL E+SDLDYWVDGCF+VI+YC+ K+LSSAI L K+LKDKFE+DE+V+E L ++ +C NAGDL+NARLIWREYE+AGFPYNV YLR
Sbjct: 592 PNIPAKSLNEIKSVLVSALASHGQLSEALLVYEEINKAGYNLEPKAVISLIEEFTKFKGELDGMLMLLTELSDLDYWVDGCFRVIIYCVHNKHLSSAIDLFKKLKDKFESDELVLEVLFDEVFAAIATSESSNLQIGLDLLWAVKNELGLVPSRQCLDFLLSACTNAGDLSNARLIWREYEVAGFPYNVLSYLR 785
BLAST of Cc_v2.0_09902.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445DZB7|A0A445DZB7_ARAHY (Pentacotripeptide-repeat region of PRORP domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A03g014995 PE=4 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 2.937e-68 Identity = 122/194 (62.89%), Postives = 139/194 (71.65%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMESL-----------------------------------------MMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
P+IP KSLNEIKSVLVS LASHGQLSEALLVYEEI KAGYNLEPKAVISLIEEFT+F GELDG+L+LL E+SDLDYWVDGCF+VI+YCI K+LSSAI L K+LKDKFE+DE+V+E L ++ +C NAGDL+NARLIWREYE+AGFPYNV YLR
Sbjct: 681 PNIPAKSLNEIKSVLVSALASHGQLSEALLVYEEINKAGYNLEPKAVISLIEEFTKFKGELDGMLMLLTELSDLDYWVDGCFRVIIYCIHNKHLSSAIDLFKKLKDKFESDELVLEVLFDEVFAAIATSESSNLQIGLDLLWAVKNELGLVPSRQCLDFLLSACTNAGDLSNARLIWREYEVAGFPYNVLSYLR 874
BLAST of Cc_v2.0_09902.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371HUM9|A0A371HUM9_MUCPR (Putative multidrug resistance protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_09510 PE=4 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 6.325e-68 Identity = 134/194 (69.07%), Postives = 144/194 (74.23%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMESL-----------------------------------------MMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
P+IP+KSLNEIKSVLVS LASHGQLSEAL+VYEEIKK G+NLEPKAVISLIEEFTQFNGELD LLLLLKEVSDLDYWVDGCFKVIMY IR KNLSSAILL KQLKDKFENDEIVME+L ++ +CANAGDLNNARLIWREYE+AG+PYNV YLR
Sbjct: 1835 PNIPSKSLNEIKSVLVSALASHGQLSEALIVYEEIKKGGHNLEPKAVISLIEEFTQFNGELDELLLLLKEVSDLDYWVDGCFKVIMYSIRNKNLSSAILLFKQLKDKFENDEIVMEALFDAVFSLIAGSESTHLQIGLDLLWAIKDELGLMTSRQCLDFLLSACANAGDLNNARLIWREYEVAGYPYNVLSYLR 2028
BLAST of Cc_v2.0_09902.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O49711|PP335_ARATH (Pentatricopeptide repeat-containing protein At4g21880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21880 PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 2.368e-27 Identity = 70/194 (36.08%), Postives = 103/194 (53.09%), Query Frame = 0 Query: 8 DIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAIL-LCKQLKDKFENDEIVME-----------------------------------------SLMMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
++P K NE+KSVL+S LAS+G ++EAL +YEE+KK +EPKA++SLIE + N EL L+ L E+ D +W+DG FK+I++ +R N SS+IL L +Q K+ D++ +E ++ +C NA D +A L+W EY+ A PYNV YLR
Sbjct: 592 EVPAKDHNELKSVLISALASNGNITEALSIYEEMKKLRCPVEPKAILSLIEN-SDSNAELGTLVELTHELRDSKFWIDGFFKIIVFAVR-NNRSSSILDLLEQTKNHLSKDDVGVEYWFEEVFKSIAETESSDVKVGLDLVSFMKEELELCPSRKCLDFLLHACVNAKDKQSALLVWEEYQCAELPYNVINYLR 783
BLAST of Cc_v2.0_09902.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6NQ81|PP304_ARATH (Pentatricopeptide repeat-containing protein At4g04790, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g04790 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 3.035e-25 Identity = 63/194 (32.47%), Postives = 102/194 (52.58%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMES-----------------------------------------LMMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
PD+P + NE+KSVL+S LAS G+ ++AL +YEE++KA +++PK++ISLI E++ GEL L+ L ++ D W+DG F++I++ +R K S + L K+ K + I +E+ ++ +C NA DL + L+W+EY+ A FP NV +LR
Sbjct: 571 PDVPAINQNELKSVLISALASRGKWADALHIYEEMRKAECHVDPKSIISLI-EYSDSKGELSTLVQLADDLQDDTSWIDGFFRMILFAVRNKKSSDIVDLLKRNKVRLLKKGIPVEAHFDEVFWAIAETEPSKVHLGMDLLRFMKDELGFVPSRKCLDFLLHACVNAKDLEHGLLVWKEYQSAAFPCNVLSFLR 763
BLAST of Cc_v2.0_09902.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:11605156-11610651 FORWARD LENGTH=843) HSP 1 Score: 113.62 bits (283), Expect = 2.394e-28 Identity = 70/194 (36.08%), Postives = 103/194 (53.09%), Query Frame = 0 Query: 8 DIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAIL-LCKQLKDKFENDEIVME-----------------------------------------SLMMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
++P K NE+KSVL+S LAS+G ++EAL +YEE+KK +EPKA++SLIE + N EL L+ L E+ D +W+DG FK+I++ +R N SS+IL L +Q K+ D++ +E ++ +C NA D +A L+W EY+ A PYNV YLR
Sbjct: 592 EVPAKDHNELKSVLISALASNGNITEALSIYEEMKKLRCPVEPKAILSLIEN-SDSNAELGTLVELTHELRDSKFWIDGFFKIIVFAVR-NNRSSSILDLLEQTKNHLSKDDVGVEYWFEEVFKSIAETESSDVKVGLDLVSFMKEELELCPSRKCLDFLLHACVNAKDKQSALLVWEEYQCAELPYNVINYLR 783
BLAST of Cc_v2.0_09902.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:11605363-11610651 FORWARD LENGTH=799) HSP 1 Score: 113.235 bits (282), Expect = 3.657e-28 Identity = 70/194 (36.08%), Postives = 103/194 (53.09%), Query Frame = 0 Query: 8 DIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAIL-LCKQLKDKFENDEIVME-----------------------------------------SLMMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
++P K NE+KSVL+S LAS+G ++EAL +YEE+KK +EPKA++SLIE + N EL L+ L E+ D +W+DG FK+I++ +R N SS+IL L +Q K+ D++ +E ++ +C NA D +A L+W EY+ A PYNV YLR
Sbjct: 548 EVPAKDHNELKSVLISALASNGNITEALSIYEEMKKLRCPVEPKAILSLIEN-SDSNAELGTLVELTHELRDSKFWIDGFFKIIVFAVR-NNRSSSILDLLEQTKNHLSKDDVGVEYWFEEVFKSIAETESSDVKVGLDLVSFMKEELELCPSRKCLDFLLHACVNAKDKQSALLVWEEYQCAELPYNVINYLR 739
BLAST of Cc_v2.0_09902.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:2435007-2439344 REVERSE LENGTH=817) HSP 1 Score: 107.457 bits (267), Expect = 3.006e-26 Identity = 63/194 (32.47%), Postives = 102/194 (52.58%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMES-----------------------------------------LMMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
PD+P + NE+KSVL+S LAS G+ ++AL +YEE++KA +++PK++ISLI E++ GEL L+ L ++ D W+DG F++I++ +R K S + L K+ K + I +E+ ++ +C NA DL + L+W+EY+ A FP NV +LR
Sbjct: 567 PDVPAINQNELKSVLISALASRGKWADALHIYEEMRKAECHVDPKSIISLI-EYSDSKGELSTLVQLADDLQDDTSWIDGFFRMILFAVRNKKSSDIVDLLKRNKVRLLKKGIPVEAHFDEVFWAIAETEPSKVHLGMDLLRFMKDELGFVPSRKCLDFLLHACVNAKDLEHGLLVWKEYQSAAFPCNVLSFLR 759
BLAST of Cc_v2.0_09902.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:2435007-2439344 REVERSE LENGTH=821) HSP 1 Score: 107.457 bits (267), Expect = 3.069e-26 Identity = 63/194 (32.47%), Postives = 102/194 (52.58%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMES-----------------------------------------LMMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
PD+P + NE+KSVL+S LAS G+ ++AL +YEE++KA +++PK++ISLI E++ GEL L+ L ++ D W+DG F++I++ +R K S + L K+ K + I +E+ ++ +C NA DL + L+W+EY+ A FP NV +LR
Sbjct: 571 PDVPAINQNELKSVLISALASRGKWADALHIYEEMRKAECHVDPKSIISLI-EYSDSKGELSTLVQLADDLQDDTSWIDGFFRMILFAVRNKKSSDIVDLLKRNKVRLLKKGIPVEAHFDEVFWAIAETEPSKVHLGMDLLRFMKDELGFVPSRKCLDFLLHACVNAKDLEHGLLVWKEYQSAAFPCNVLSFLR 763
BLAST of Cc_v2.0_09902.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:2435007-2438728 REVERSE LENGTH=684) HSP 1 Score: 107.071 bits (266), Expect = 4.795e-26 Identity = 63/194 (32.47%), Postives = 102/194 (52.58%), Query Frame = 0 Query: 7 PDIPNKSLNEIKSVLVSTLASHGQLSEALLVYEEIKKAGYNLEPKAVISLIEEFTQFNGELDGLLLLLKEVSDLDYWVDGCFKVIMYCIRIKNLSSAILLCKQLKDKFENDEIVMES-----------------------------------------LMMRSCANAGDLNNARLIWREYEIAGFPYNVKCYLR 159
PD+P + NE+KSVL+S LAS G+ ++AL +YEE++KA +++PK++ISLI E++ GEL L+ L ++ D W+DG F++I++ +R K S + L K+ K + I +E+ ++ +C NA DL + L+W+EY+ A FP NV +LR
Sbjct: 434 PDVPAINQNELKSVLISALASRGKWADALHIYEEMRKAECHVDPKSIISLI-EYSDSKGELSTLVQLADDLQDDTSWIDGFFRMILFAVRNKKSSDIVDLLKRNKVRLLKKGIPVEAHFDEVFWAIAETEPSKVHLGMDLLRFMKDELGFVPSRKCLDFLLHACVNAKDLEHGLLVWKEYQSAAFPCNVLSFLR 626 The following BLAST results are available for this feature:
BLAST of Cc_v2.0_09902.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_09902.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot ) Total hits: 2 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_09902.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCajCajn.Asha.2.0.Cc_v2.0_09902.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09902.1; Name=Cc_v2.0_09902.1; organism=Cajanus cajan; type=mRNA; length=762bpback to top protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_09902.1 >drCajCajn.Asha.2.0.Cc_v2.0_09902.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09902.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_09902.1; organism=Cajanus cajan; type=polypeptide; length=253bpback to top mRNA from alignment at CcLG04_v2.0:15398613..15400798+ Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>drCajCajn.Asha.2.0.Cc_v2.0_09902.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09902.1; Name=Cc_v2.0_09902.1; organism=Cajanus cajan; type=mRNA; length=2186bp; location=Sequence derived from: CcLG04_v2.0:15398613..15400798+ (Cajanus cajanback to top Coding sequence (CDS) from alignment at CcLG04_v2.0:15398613..15400798+ >drCajCajn.Asha.2.0.Cc_v2.0_09902.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_09902.1; Name=Cc_v2.0_09902.1; organism=Cajanus cajan; type=CDS; length=762bp; location=Sequence derived from: CcLG04_v2.0:15398613..15400798+ (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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