Cc_v2.0_08440.1

Transcript Overview
NameCc_v2.0_08440.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_08440.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length411
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG03_v2.0chromosomeCcLG03_v2.0:51944272..51945648 +Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjccaL117Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0406Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL366Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0660Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0832Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL1075Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL178Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL282Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR394Pisum sativum Cameor genome v1aPisum sativum
ccavrvR363Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR340Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR381Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccapvR391Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR362Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavssR367Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR407Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0791Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR345Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR353Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR296Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavuR302Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR427Vigna umbellata FF25 genome v1.0Vigna umbellata
ccccaL0981Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL0986Cajanus cajan Asha genome v1.0Cajanus cajan
ccavunR252Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR257Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR388Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR398Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigun07g156400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
jg3094.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vum_08G01286.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun06g114000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Va02G053670.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.006G103000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun07g156400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.Ca_v2.0_08863Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Va09G047820.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.007G188600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr06.1568Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_014657524.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_10130Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_05G01114.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_31702Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
PvulFLAVERTChr07.1212Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigun06g114000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_007168Cajanus cajan Asha genome v1.0Cajanus cajan
rna-KK1_011058Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_08440drCajCajn.Asha.2.0.Cc_v2.0_08440Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_08440.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_08440.1.exon1Cajanus cajanexon
Cc_v2.0_08440.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_08440.1.exon2Cajanus cajanexon
Cc_v2.0_08440.1.exon3drCajCajn.Asha.2.0.Cc_v2.0_08440.1.exon3Cajanus cajanexon
Cc_v2.0_08440.1.exon4drCajCajn.Asha.2.0.Cc_v2.0_08440.1.exon4Cajanus cajanexon
Cc_v2.0_08440.1.exon5drCajCajn.Asha.2.0.Cc_v2.0_08440.1.exon5Cajanus cajanexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_08440.1.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_08440.1.utr5p1Cajanus cajanfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_08440.1drCajCajn.Asha.2.0.cds.Cc_v2.0_08440.1Cajanus cajanCDS
cds.Cc_v2.0_08440.1drCajCajn.Asha.2.0.cds.Cc_v2.0_08440.1_2Cajanus cajanCDS
cds.Cc_v2.0_08440.1drCajCajn.Asha.2.0.cds.Cc_v2.0_08440.1_3Cajanus cajanCDS
cds.Cc_v2.0_08440.1drCajCajn.Asha.2.0.cds.Cc_v2.0_08440.1_4Cajanus cajanCDS
cds.Cc_v2.0_08440.1drCajCajn.Asha.2.0.cds.Cc_v2.0_08440.1_5Cajanus cajanCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_08440.1.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_08440.1.utr3p1Cajanus cajanthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_08440.1drCajCajn.Asha.2.0.Cc_v2.0_08440.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_08440.1drCajCajn.Asha.2.0.Cc_v2.0_08440.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_08440.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TXL3|A0A151TXL3_CAJCA (Uncharacterized protein At2g34160 family OS=Cajanus cajan OX=3821 GN=KK1_011058 PE=4 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 6.174e-92
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:    1 MPTTATASLSPKSNLEVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANTESKPSANDNDKKSQI 136
            MPTTATASLSPKSNLEVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANTESKPSANDNDKKSQI
Sbjct:    1 MPTTATASLSPKSNLEVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANTESKPSANDNDKKSQI 136
[Close]
BLAST of Cc_v2.0_08440.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LDT4|A0A8B8LDT4_ABRPR (Uncharacterized protein At2g34160 OS=Abrus precatorius OX=3816 GN=LOC113863519 PE=4 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 2.065e-69
Identity = 105/126 (83.33%), Postives = 118/126 (93.65%), Query Frame = 0 
Query:    4 TATASLSPKSNLEVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANTESKPSAND 129
            T  A+++P  N ++ESP+KNRIQVSNTKKPLFFYVNLAKRYIQQ NEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSS+ MKDE+KGRLVQKAKIEI+LGKSEKFDNLMA A+TES+P+A+D
Sbjct:    3 TVAAAVTP--NTDLESPKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMAPASTESEPAADD 126
[Close]
BLAST of Cc_v2.0_08440.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BQ65|V7BQ65_PHAVU (DNA/RNA-binding protein Alba-like domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G103000g PE=4 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 4.396e-69
Identity = 111/136 (81.62%), Postives = 120/136 (88.24%), Query Frame = 0 
Query:    1 MPTTA---TASLSPKSNLEVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANTESKPSANDNDKK 133
            MPT A      +   ++ E+ESP+KNRIQVSNTKKPLFFYVNLAKRYIQQR+EVVLSALGMAITTVVTIAEILKNNGLATEKKV TSSISMKDESKGRLVQKAKIEI+L KSEKFDNLMA  NTESK +AND+DKK
Sbjct:   83 MPTVAAPPVPQIQSTTDHEIESPKKNRIQVSNTKKPLFFYVNLAKRYIQQRDEVVLSALGMAITTVVTIAEILKNNGLATEKKVSTSSISMKDESKGRLVQKAKIEIVLEKSEKFDNLMAPTNTESKSAANDSDKK 218
[Close]
BLAST of Cc_v2.0_08440.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371FI27|A0A371FI27_MUCPR (DNA/RNA-binding protein Alba-like domain-containing protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_41825 PE=4 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.172e-67
Identity = 104/124 (83.87%), Postives = 113/124 (91.13%), Query Frame = 0 
Query:    1 MPTTATASLSPKSNLEVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANTESK 124
            MPT A    +  +NLE+ESP+KNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNG ATEKKV TSS+SMKDE+KGRLVQKAKIEI+L KSEKFDNLMA A+TES+
Sbjct:    1 MPTVAAPVPTNTTNLEIESPKKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGFATEKKVSTSSVSMKDENKGRLVQKAKIEIVLEKSEKFDNLMAHASTESE 124
[Close]
BLAST of Cc_v2.0_08440.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TEB3|A0A1S3TEB3_VIGRR (Uncharacterized protein At2g34160 OS=Vigna radiata var. radiata OX=3916 GN=LOC106754582 PE=4 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 2.869e-66
Identity = 106/136 (77.94%), Postives = 116/136 (85.29%), Query Frame = 0 
Query:    1 MPTTATASLSPKSNL---EVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANTESKPSANDNDKK 133
            MPT A   +    N    E+ESP+KNRIQVSNTKKPLFFYVNLAKRYIQQR+EVVLSALGMAITTVVTIAEILKNNG ATEKKV TSS+SMKDE+KGRLVQKAKIEI+L KSEKFDNLMA  NTESK +AN+  K+
Sbjct:    1 MPTVAAPPVPQIQNTTDHEIESPKKNRIQVSNTKKPLFFYVNLAKRYIQQRDEVVLSALGMAITTVVTIAEILKNNGFATEKKVSTSSVSMKDENKGRLVQKAKIEIVLEKSEKFDNLMAPTNTESKSAANEKSKQ 136
[Close]
BLAST of Cc_v2.0_08440.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KJS0|A0A4D6KJS0_VIGUN (Uncharacterized conserved protein UCP030333 OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g1248 PE=4 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 3.856e-65
Identity = 107/137 (78.10%), Postives = 118/137 (86.13%), Query Frame = 0 
Query:    1 MPTTATASLSPKSNL---EVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMA-SANTESKPSANDNDKK 133
            MPT A   +    N    E+ESP+KNRIQVSNTKKPLFFYVNLAKRYIQQR+EVVLSALGMAITTVVTIAEILKNNG ATEKKV TSS+SMKDE+KGRLVQKAKIEI+L KSEKFDNLMA + NTESK  AN+++KK
Sbjct:    1 MPTVAAPPVPQIQNTNDHEIESPKKNRIQVSNTKKPLFFYVNLAKRYIQQRDEVVLSALGMAITTVVTIAEILKNNGFATEKKVSTSSVSMKDENKGRLVQKAKIEIVLEKSEKFDNLMAPTTNTESKTGANESNKK 137
[Close]
BLAST of Cc_v2.0_08440.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9VLM9|A0A0L9VLM9_PHAAN (DNA/RNA-binding protein Alba-like domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0073710 PE=4 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.288e-64
Identity = 104/131 (79.39%), Postives = 113/131 (86.26%), Query Frame = 0 
Query:    1 MPTTATASLSPKSNL---EVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANTESKPSAN 128
            MPT A   +    N    E+ESP+KNRIQVSNTKKPLFFYVNLAKRYIQQR+EVVLSALGMAITTVVTIAEILKNNG ATEKKV TSS+SMKDE+KGRLVQKAKIEI+L KSEKFD+LMA  NTESK +AN
Sbjct:    1 MPTVAAPPVPQIQNTTDHEIESPKKNRIQVSNTKKPLFFYVNLAKRYIQQRDEVVLSALGMAITTVVTIAEILKNNGFATEKKVSTSSVSMKDENKGRLVQKAKIEIVLEKSEKFDSLMAPTNTESKSAAN 131
[Close]
BLAST of Cc_v2.0_08440.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1JRN9|I1JRN9_SOYBN (DNA/RNA-binding protein Alba-like domain-containing protein OS=Glycine max OX=3847 GN=100799167 PE=4 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.327e-64
Identity = 103/133 (77.44%), Postives = 115/133 (86.47%), Query Frame = 0 
Query:    1 MPTTATASL--SPKSNLEVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANTESKPSANDND 131
            MPTT   S+  +  +N  VESP+KN+IQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGM ITTVVTIAEILKNNGLA EKKV TSS++MKDE+KGRLVQKAKIEI+L K+EKFD+L A ANTESK  A D+D
Sbjct:    1 MPTTVAVSVPQNQNTNHGVESPKKNKIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMGITTVVTIAEILKNNGLAIEKKVSTSSVTMKDETKGRLVQKAKIEIVLEKTEKFDSLTAVANTESKVVAADDD 133
[Close]
BLAST of Cc_v2.0_08440.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2RI34|A0A0B2RI34_GLYSO (DNA/RNA-binding protein Alba-like domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_008160 PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.011e-63
Identity = 102/133 (76.69%), Postives = 115/133 (86.47%), Query Frame = 0 
Query:    1 MPTTATASL--SPKSNLEVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANTESKPSANDND 131
            MPTT   S+  +  +N  VESP+KN+IQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGM ITTVVTIAEILKNNGLA EKKV TSS++MKDE+KGRLVQKAKIEI+L K+EKFD+L A ANTES+  A D+D
Sbjct:    1 MPTTVAVSVPQNQNTNHGVESPKKNKIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMGITTVVTIAEILKNNGLAIEKKVSTSSVTMKDETKGRLVQKAKIEIVLEKTEKFDSLTAVANTESEVVAADDD 133
[Close]
BLAST of Cc_v2.0_08440.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151U5B5|A0A151U5B5_CAJCA (Uncharacterized protein At2g34160 family OS=Cajanus cajan OX=3821 GN=KK1_007168 PE=4 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.415e-63
Identity = 99/115 (86.09%), Postives = 106/115 (92.17%), Query Frame = 0 
Query:   18 ESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANT--ESKPSANDN 130
            ESP+KNRIQVSNTKKPLFFYVNLAKRYIQQ NEV LSALGMAI TVVTIAEILKNNGLATEKKVLTS++ MKDE+KGRLVQKAKIEI+LGKSEKFDNLMA ANT   SK +A+DN
Sbjct:   11 ESPKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAIATVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDNLMAPANTTDASKAAADDN 125
[Close]
BLAST of Cc_v2.0_08440.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O22969|Y2416_ARATH (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.718e-53
Identity = 80/113 (70.80%), Postives = 96/113 (84.96%), Query Frame = 0 
Query:   14 NLEVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANTESKPS 126
            NL  +S +KNRIQVSNTKKPLFFYVNLAKRY+QQ N+V LSALGMAI TVVT+ EILKNNG A EKK++TS++ +KD+++GR VQKAKIEI L KSEKFD LMA+AN E + +
Sbjct:   12 NLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKEDA 124
[Close]
BLAST of Cc_v2.0_08440.1 vs. Araport11
Match: | (Symbols: DAN1 | D NUCLDUO1-ACTIVATEEIC ACID BINDING PROTEIN 1 | chr3:1255660-1256739 REVERSE LENGTH=164)

HSP 1 Score: 176.792 bits (447), Expect = 1.429e-57
Identity = 84/100 (84.00%), Postives = 96/100 (96.00%), Query Frame = 0 
Query:   17 VESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLM 116
            VE+ +KNRIQVSNTKKPLFFYVNLAKRYIQQ NEV LSALGMAITTVVTI+EILKNNGLATEKKVLTS++ MKDE+KG++VQKAKIEI+LGKS+KFD+L+
Sbjct:   32 VETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEILKNNGLATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLV 131
[Close]
BLAST of Cc_v2.0_08440.1 vs. Araport11
Match: | (Symbols: IRP7, ALBA2 | NVOLVED IN rRNA PROCESSING 7 | chr2:14426283-14427220 FORWARD LENGTH=130)

HSP 1 Score: 167.162 bits (422), Expect = 2.835e-54
Identity = 80/113 (70.80%), Postives = 96/113 (84.96%), Query Frame = 0 
Query:   14 NLEVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLMASANTESKPS 126
            NL  +S +KNRIQVSNTKKPLFFYVNLAKRY+QQ N+V LSALGMAI TVVT+ EILKNNG A EKK++TS++ +KD+++GR VQKAKIEI L KSEKFD LMA+AN E + +
Sbjct:   12 NLATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKEDA 124
[Close]
BLAST of Cc_v2.0_08440.1 vs. Araport11
Match: | (Symbols: ALBA1, IRP5 | INVOLVED IN rRNA PROCESSING 5 | chr1:10223461-10224592 REVERSE LENGTH=130)

HSP 1 Score: 161.384 bits (407), Expect = 5.677e-52
Identity = 77/103 (74.76%), Postives = 90/103 (87.38%), Query Frame = 0 
Query:   14 NLEVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNEVVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKAKIEIILGKSEKFDNLM 116
            NL V++ +KNRIQVSNTKKPLFFYVNLAKRY+QQ  +V LSALGMAI TVVT+AEILKNNG A EKK++TS++ +KD+S+GR VQKAKIEI L KSEKFD LM
Sbjct:   12 NLAVDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGFAVEKKIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELM 114
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_08440.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151TXL3|A0A151TXL3_CAJCA6.174e-92100.00Uncharacterized protein At2g34160 family OS=Cajanu... [more]
tr|A0A8B8LDT4|A0A8B8LDT4_ABRPR2.065e-6983.33Uncharacterized protein At2g34160 OS=Abrus precato... [more]
tr|V7BQ65|V7BQ65_PHAVU4.396e-6981.62DNA/RNA-binding protein Alba-like domain-containin... [more]
tr|A0A371FI27|A0A371FI27_MUCPR3.172e-6783.87DNA/RNA-binding protein Alba-like domain-containin... [more]
tr|A0A1S3TEB3|A0A1S3TEB3_VIGRR2.869e-6677.94Uncharacterized protein At2g34160 OS=Vigna radiata... [more]
tr|A0A4D6KJS0|A0A4D6KJS0_VIGUN3.856e-6578.10Uncharacterized conserved protein UCP030333 OS=Vig... [more]
tr|A0A0L9VLM9|A0A0L9VLM9_PHAAN1.288e-6479.39DNA/RNA-binding protein Alba-like domain-containin... [more]
tr|I1JRN9|I1JRN9_SOYBN2.327e-6477.44DNA/RNA-binding protein Alba-like domain-containin... [more]
tr|A0A0B2RI34|A0A0B2RI34_GLYSO1.011e-6376.69DNA/RNA-binding protein Alba-like domain-containin... [more]
tr|A0A151U5B5|A0A151U5B5_CAJCA2.415e-6386.09Uncharacterized protein At2g34160 family OS=Cajanu... [more]
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BLAST of Cc_v2.0_08440.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 1
Match NameE-valueIdentityDescription
sp|O22969|Y2416_ARATH2.718e-5370.80Uncharacterized protein At2g34160 OS=Arabidopsis t... [more]
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BLAST of Cc_v2.0_08440.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
|1.429e-5784.00Symbols: DAN1 | D NUCLDUO1-ACTIVATEEIC ACID BINDIN... [more]
|2.835e-5470.80Symbols: IRP7, ALBA2 | NVOLVED IN rRNA PROCESSING ... [more]
|5.677e-5274.76Symbols: ALBA1, IRP5 | INVOLVED IN rRNA PROCESSING... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.110.20:FF:000005coord: 21..135
e-value: 2.3E-49
score: 168.1
IPR036882Alba-like domain superfamilyGENE3D3.30.110.20coord: 21..133
e-value: 4.1E-50
score: 170.5
IPR036882Alba-like domain superfamilySUPERFAMILY82704AlbA-likecoord: 22..117
IPR014560Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-relatedPIRSFPIRSF030333UCP030333_Albacoord: 2..135
e-value: 2.9E-59
score: 192.2
IPR014560Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-relatedPANTHERPTHR31947DNA/RNA-BINDING PROTEIN ALBA 3coord: 5..129
IPR002775DNA/RNA-binding protein Alba-likePFAMPF01918Albacoord: 23..85
e-value: 6.9E-10
score: 49.9

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_08440.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_08440.1; Name=Cc_v2.0_08440.1; organism=Cajanus cajan; type=mRNA; length=411bp
ATGCCCACCACAGCTACTGCATCTCTATCCCCAAAAAGTAACCTTGAAGT
TGAATCCCCAAGGAAGAATAGAATTCAGGTTTCCAACACTAAGAAACCCC
TATTCTTTTACGTCAATCTTGCCAAGAGGTATATACAACAACGTAATGAA
GTTGTGCTTTCTGCTCTTGGAATGGCTATAACTACAGTTGTTACAATTGC
TGAGATTTTGAAGAATAATGGGCTTGCTACTGAGAAGAAAGTTTTGACAT
CTTCAATCAGCATGAAGGATGAGAGCAAAGGTCGTTTGGTGCAAAAGGCT
AAGATTGAAATTATTCTGGGAAAATCTGAGAAGTTTGACAATCTGATGGC
TTCTGCCAACACTGAATCAAAACCAAGTGCTAATGACAATGACAAGAAAT
CACAAATATAG
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_08440.1

>drCajCajn.Asha.2.0.Cc_v2.0_08440.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_08440.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_08440.1; organism=Cajanus cajan; type=polypeptide; length=136bp
MPTTATASLSPKSNLEVESPRKNRIQVSNTKKPLFFYVNLAKRYIQQRNE
VVLSALGMAITTVVTIAEILKNNGLATEKKVLTSSISMKDESKGRLVQKA
KIEIILGKSEKFDNLMASANTESKPSANDNDKKSQI
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mRNA from alignment at CcLG03_v2.0:51944272..51945648+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_08440.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_08440.1; Name=Cc_v2.0_08440.1; organism=Cajanus cajan; type=mRNA; length=1377bp; location=Sequence derived from: CcLG03_v2.0:51944272..51945648+ (Cajanus cajan
atagaatataatagaatagaataATAATCACAATGCCCACCACAGCTACT
GCATCTCTATCCCCAAAAAGTAACCTTGAAGTTGAATCCCCAAGGAAGAA
TAGAATTCAGGTTTCCAACACTAAGAAACCCCTATTCTTTTACGTCAATC
TTGCCAAGGTACTATCATTTTTTTCAATTTCCTTATTCTTTTACATTACT
TAATTCCTAATCCAAGCAATGCACATTGTTTTTCTTTATTTTTTTCATTT
ATTAACCTCTCTCTTCTTTAAATGCTCTCATTGCTTAGATCTGCAACTAA
GAAAAGTAACACTATTCTTTATGCAATCATTGAATTTGTTGCTTTGATAA
TTTATCAATCTCAATTGCTCATACAATTTTCACAGGCTTTGTTGTTTTTA
TTCTTAATACTAAAAAAGTATTTTCTTAACAAAATGACAACATATAGAAA
GTTCACCGGTGATTATGTGCATAATGCTAAAATTGAAATAGTTTCTCCTT
TGACACAGAGGTATATACAACAACGTAATGAAGTTGTGCTTTCTGCTCTT
GGAATGGGTATTTCCTCTCAAACTTTTCTTTCATCAAAAGATCTTTCTTC
TTTGAATGTATTAATTTATAAACTCAAGATTTTCTATGCTATTTACTCCA
TATCATGTGTAGTTTTGAGGACATTTGTATATTCATGTTCATTAAGTTAG
TGTGTACCTCTCTACAGCTATAACTACAGTTGTTACAATTGCTGAGATTT
TGAAGAATAATGGGCTTGCTACTGAGAAGAGTAAGATTTATCTTGTTATG
CTAATGTCTCAATTACAAGATGATTAATTGTAGCTATCCTAATCAATATT
GTGGGATGAAGCAGAAGTTTTGACATCTTCAATCAGCATGAAGGATGAGA
GCAAAGGTCGTTTGGTGCAAAAGGCTAAGGTGGGTTCCAAGTGGATTTTA
GTTTTAGTTTCTAGCAACTTTATTTGGACCTATTATGGTAATTTTGATGA
CTTTTTCATTATTTTATAGATTGAAATTATTCTGGGAAAATCTGAGAAGT
TTGACAATCTGATGGCTTCTGCCAACACTGAATCAAAACCAAGTGCTAAT
GACAATGACAAGAAATCACAAATATAGGAGAGTCTGGCCAATGTGCACCT
TATGTAGTTAACTTTGAGTTTCTCTTAGTGCTATTTACATCCATAGACGT
ACATAGGAGACAAGTTAGATAATTGTTTTTGTTGTTTTAATCCATGAGAA
AAATAGTCATCAAGTTACAATGATAAGCCACCACTGAGTGAGTCAAACAT
ATATAAATTCCCATATATACGATGATTGCAAGATCCTTAAGTTGATTAAT
TACTTTTTATTTTTTCTTATTCGCCTT
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Coding sequence (CDS) from alignment at CcLG03_v2.0:51944272..51945648+

>drCajCajn.Asha.2.0.Cc_v2.0_08440.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_08440.1; Name=Cc_v2.0_08440.1; organism=Cajanus cajan; type=CDS; length=411bp; location=Sequence derived from: CcLG03_v2.0:51944272..51945648+ (Cajanus cajan
ATGCCCACCACAGCTACTGCATCTCTATCCCCAAAAAGTAACCTTGAAGT
TGAATCCCCAAGGAAGAATAGAATTCAGGTTTCCAACACTAAGAAACCCC
TATTCTTTTACGTCAATCTTGCCAAGAGGTATATACAACAACGTAATGAA
GTTGTGCTTTCTGCTCTTGGAATGGCTATAACTACAGTTGTTACAATTGC
TGAGATTTTGAAGAATAATGGGCTTGCTACTGAGAAGAAAGTTTTGACAT
CTTCAATCAGCATGAAGGATGAGAGCAAAGGTCGTTTGGTGCAAAAGGCT
AAGATTGAAATTATTCTGGGAAAATCTGAGAAGTTTGACAATCTGATGGC
TTCTGCCAACACTGAATCAAAACCAAGTGCTAATGACAATGACAAGAAAT
CACAAATATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036882Alba-like_dom_sf
IPR014560UCP030333_Alba
IPR002775DNA/RNA-bd_Alba-like
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding