Cc_v2.0_08296.2

Transcript Overview
NameCc_v2.0_08296.2
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_08296.2
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length582
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG03_v2.0chromosomeCcLG03_v2.0:50403693..50406478 +Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjccaL117Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0400Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL366Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0607Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0660Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL538Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0831Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0836Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL1075Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL178Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL186Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR329Pisum sativum Cameor genome v1aPisum sativum
carccaL282Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR394Pisum sativum Cameor genome v1aPisum sativum
ccavrvR285Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR363Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR340Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR381Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR359Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR399Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR362Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavssR367Vicia sativa cv. Studenica genome v1.0Vicia sativa
carccaL578Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavssR397Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR407Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavuR265Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR345Vigna umbellata FF25 genome v1.0Vigna umbellata
ccccaL0797Cajanus cajan Asha genome v1.0Cajanus cajan
ccavuR296Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavuR302Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR427Vigna umbellata FF25 genome v1.0Vigna umbellata
ccccaL0964Cajanus cajan Asha genome v1.0Cajanus cajan
ccavunR252Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR257Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR388Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR405Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.5g177360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat3g011680.1Pisum sativum Cameor genome v1aPisum sativum
jg31061.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_08296drCajCajn.Asha.2.0.Cc_v2.0_08296Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_08296.2.exon1drCajCajn.Asha.2.0.Cc_v2.0_08296.2.exon1Cajanus cajanexon
Cc_v2.0_08296.2.exon2drCajCajn.Asha.2.0.Cc_v2.0_08296.2.exon2Cajanus cajanexon
Cc_v2.0_08296.2.exon3drCajCajn.Asha.2.0.Cc_v2.0_08296.2.exon3Cajanus cajanexon
Cc_v2.0_08296.2.exon4drCajCajn.Asha.2.0.Cc_v2.0_08296.2.exon4Cajanus cajanexon
Cc_v2.0_08296.2.exon5drCajCajn.Asha.2.0.Cc_v2.0_08296.2.exon5Cajanus cajanexon
Cc_v2.0_08296.2.exon6drCajCajn.Asha.2.0.Cc_v2.0_08296.2.exon6Cajanus cajanexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_08296.2.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_08296.2.utr5p1Cajanus cajanfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_08296.2drCajCajn.Asha.2.0.cds.Cc_v2.0_08296.2Cajanus cajanCDS
cds.Cc_v2.0_08296.2drCajCajn.Asha.2.0.cds.Cc_v2.0_08296.2_2Cajanus cajanCDS
cds.Cc_v2.0_08296.2drCajCajn.Asha.2.0.cds.Cc_v2.0_08296.2_3Cajanus cajanCDS
cds.Cc_v2.0_08296.2drCajCajn.Asha.2.0.cds.Cc_v2.0_08296.2_4Cajanus cajanCDS
cds.Cc_v2.0_08296.2drCajCajn.Asha.2.0.cds.Cc_v2.0_08296.2_5Cajanus cajanCDS
cds.Cc_v2.0_08296.2drCajCajn.Asha.2.0.cds.Cc_v2.0_08296.2_6Cajanus cajanCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_08296.2.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_08296.2.utr3p1Cajanus cajanthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_08296.2drCajCajn.Asha.2.0.Cc_v2.0_08296.2Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_08296.2drCajCajn.Asha.2.0.Cc_v2.0_08296.2-proteinCajanus cajanpolypeptide


Homology
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TVU2|A0A151TVU2_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_010429 PE=4 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 2.844e-124
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
Query:    1 MAASSSSLSSSDDSSPHRRRRHHRHRRDRDKDKDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
            MAASSSSLSSSDDSSPHRRRRHHRHRRDRDKDKDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct:    1 MAASSSSLSSSDDSSPHRRRRHHRHRRDRDKDKDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193          
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445FKJ0|A0A445FKJ0_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_052349 PE=4 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 2.858e-63
Identity = 134/161 (83.23%), Postives = 141/161 (87.58%), Query Frame = 0
Query:   33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
            KDSLKIRKK+KSQSQSRGKRRR+H+ HSS S S S    YS S         +SSDSEHETSHRS RHK+SDRPKKNKEK++SKSHRHK QKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct:   31 KDSLKIRKKSKSQSQSRGKRRRRHYHHSSDSYSSSSLSDYSRSE--------SSSDSEHETSHRSKRHKKSDRPKKNKEKDQSKSHRHKWQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 183          
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|I1NBV0|I1NBV0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100811105 PE=4 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 2.858e-63
Identity = 134/161 (83.23%), Postives = 141/161 (87.58%), Query Frame = 0
Query:   33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
            KDSLKIRKK+KSQSQSRGKRRR+H+ HSS S S S    YS S         +SSDSEHETSHRS RHK+SDRPKKNKEK++SKSHRHK QKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct:   31 KDSLKIRKKSKSQSQSRGKRRRRHYHHSSDSYSSSSLSDYSRSE--------SSSDSEHETSHRSKRHKKSDRPKKNKEKDQSKSHRHKWQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 183          
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LG39|A0A445LG39_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_008027 PE=4 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.774e-61
Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 0
Query:   33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
            KDSLKIRKK+KSQSQSRG+RRR+HHRHSS SDS S S     S       SE+SSDSEHETSHRS RHK+SDRPKKNKEK+RSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct:   31 KDSLKIRKKSKSQSQSRGERRRRHHRHSSDSDSYSSSSLSDYSR------SESSSDSEHETSHRSKRHKKSDRPKKNKEKDRSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 185          
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|C6T1E5|C6T1E5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100500332 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.970e-60
Identity = 138/161 (85.71%), Postives = 144/161 (89.44%), Query Frame = 0
Query:   33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
            KDSLKIRKK+KSQSQSRG+RRR+HHRHSS SDS S S     S       SE+SSDSEHETSHRS RHK+SDRPKKNKEK+RSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLG DKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct:   31 KDSLKIRKKSKSQSQSRGERRRRHHRHSSDSDSYSSSSLSDYSR------SESSSDSEHETSHRSKRHKKSDRPKKNKEKDRSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGHDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 185          
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KQ44|A0A4D6KQ44_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g1415 PE=4 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 2.311e-58
Identity = 141/161 (87.58%), Postives = 147/161 (91.30%), Query Frame = 0
Query:   33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
            KDS KIRKKTKSQS  RGKRRR+   H   S+SDSDSDS+SSSS+SD SRSE+SSDSE E SHRS RHKRSDRPKKNKEK+RSKSH HKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct:   31 KDSFKIRKKTKSQS--RGKRRRR--HHHHFSNSDSDSDSHSSSSLSDYSRSESSSDSEREASHRSKRHKRSDRPKKNKEKDRSKSHHHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 187          
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9VD13|A0A0L9VD13_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0075180 PE=4 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.616e-56
Identity = 138/162 (85.19%), Postives = 143/162 (88.27%), Query Frame = 0
Query:   32 DKDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
            DKDSLKIRKKTKSQS  RGKRRR+HH HSS+SDSDS S S  S      SRSE+SSDSE E SHRS RHKRSDRPKKNKEK+RSKSH HKRQKHKVKEKQHDER SSPVQLSKFLGRDKDD VRRSAVSGKKILLKLEK+KEDKVAESKRNELLNFLNASFD
Sbjct:   30 DKDSLKIRKKTKSQS--RGKRRRRHHHHSSNSDSDSHSSSSVSDY----SRSESSSDSEREASHRSKRHKRSDRPKKNKEKDRSKSHHHKRQKHKVKEKQHDERRSSPVQLSKFLGRDKDDDVRRSAVSGKKILLKLEKSKEDKVAESKRNELLNFLNASFD 185          
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1J7IF00|A0A1J7IF00_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_01049 PE=4 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.672e-56
Identity = 123/162 (75.93%), Postives = 134/162 (82.72%), Query Frame = 0
Query:   32 DKDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
            +KDSLKIRKK+KS +     +RR  HRHSS SDS S S    SS       SE+SS+SEHET+HRS RHK+SDR KKNKEK+RSKSHRHKRQKHK+KEKQH ER SSPVQLSKFLGRDKDD VRRSAVSGKKILLKL+KTKEDK AESKRNELLNFLNASFD
Sbjct:   34 NKDSLKIRKKSKSHT-----KRRYRHRHSSDSDSYSSSSLSDSSR------SESSSESEHETTHRSKRHKKSDRSKKNKEKDRSKSHRHKRQKHKLKEKQHGERISSPVQLSKFLGRDKDDSVRRSAVSGKKILLKLDKTKEDKAAESKRNELLNFLNASFD 184          
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VHV3|A0A1S3VHV3_VIGRR (Splicing regulatory glutamine/lysine-rich protein 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775138 PE=4 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.845e-56
Identity = 140/161 (86.96%), Postives = 145/161 (90.06%), Query Frame = 0
Query:   33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
            KDSLKIRKKTKSQS  RGKRRR+HH HSS+SDSDSDS S SS S    SRSE+SSDSE E SHRS RHKRSDRPKKNKEK+RSKSH HKRQKHK KEKQHDER SSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEK+KEDKVAESKRNELLNFLNASFD
Sbjct:   31 KDSLKIRKKTKSQS--RGKRRRRHHHHSSNSDSDSDSHSSSSVSDY--SRSESSSDSEREASHRSKRHKRSDRPKKNKEKDRSKSHHHKRQKHKEKEKQHDERRSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKSKEDKVAESKRNELLNFLNASFD 187          
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|V7BLX9|V7BLX9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G088300g PE=4 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 5.617e-55
Identity = 131/161 (81.37%), Postives = 141/161 (87.58%), Query Frame = 0
Query:   33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
            KDSLKIRKKTKSQS+ + +          H    S+SDS+SSSS+SD SRSE+SSDSEHETSHRS RHKRSDRPKKNKEK+RSKSH HKR KHKVKEKQHDER+SSPVQLSKFLGRDK+DGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct:   31 KDSLKIRKKTKSQSRGKRR--------RRHHHHSSNSDSHSSSSVSDYSRSESSSDSEHETSHRSKRHKRSDRPKKNKEKDRSKSHHHKRPKHKVKEKQHDERNSSPVQLSKFLGRDKNDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 183          
BLAST of Cc_v2.0_08296.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:9875068-9876442 REVERSE LENGTH=177)

HSP 1 Score: 120.939 bits (302), Expect = 1.502e-34
Identity = 71/98 (72.45%), Postives = 84/98 (85.71%), Query Frame = 0
Query:   96 RSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
            +S RHK+ ++PKK K+KERSKSHRHKR K++ ++K   E SS PV+LSKFL RDKDDG RRSAVSGKKILLK++K+KEDK AESKRNELL FLNASFD
Sbjct:   80 KSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKKGEGEGSSGPVKLSKFLNRDKDDGERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNASFD 177          
BLAST of Cc_v2.0_08296.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:9875068-9876442 REVERSE LENGTH=177)

HSP 1 Score: 120.939 bits (302), Expect = 1.502e-34
Identity = 71/98 (72.45%), Postives = 84/98 (85.71%), Query Frame = 0
Query:   96 RSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
            +S RHK+ ++PKK K+KERSKSHRHKR K++ ++K   E SS PV+LSKFL RDKDDG RRSAVSGKKILLK++K+KEDK AESKRNELL FLNASFD
Sbjct:   80 KSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKKGEGEGSSGPVKLSKFLNRDKDDGERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNASFD 177          
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151TVU2|A0A151TVU2_CAJCA2.844e-124100.00Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|A0A445FKJ0|A0A445FKJ0_GLYSO2.858e-6383.23Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|I1NBV0|I1NBV0_SOYBN2.858e-6383.23Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A445LG39|A0A445LG39_GLYSO1.774e-6186.34Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|C6T1E5|C6T1E5_SOYBN2.970e-6085.71Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A4D6KQ44|A0A4D6KQ44_VIGUN2.311e-5887.58Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0A0L9VD13|A0A0L9VD13_PHAAN1.616e-5685.19Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A1J7IF00|A0A1J7IF00_LUPAN1.672e-5675.93Uncharacterized protein OS=Lupinus angustifolius O... [more]
tr|A0A1S3VHV3|A0A1S3VHV3_VIGRR7.845e-5686.96Splicing regulatory glutamine/lysine-rich protein ... [more]
tr|V7BLX9|V7BLX9_PHAVU5.617e-5581.37Uncharacterized protein OS=Phaseolus vulgaris OX=3... [more]
back to top
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Cc_v2.0_08296.2 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|1.502e-3472.45Symbols: no symbol available | no full name availa... [more]
|1.502e-3472.45Symbols: no symbol available | no full name availa... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35760SI:CH211-22I13.2coord: 1..193

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_08296.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_08296.2; Name=Cc_v2.0_08296.2; organism=Cajanus cajan; type=mRNA; length=582bp
ATGGCGGCCTCTTCGTCCTCTCTCTCTTCCTCCGACGACTCTTCTCCTCA
CCGCCGCAGGCGTCATCACCGCCATCGCCGAGACCGTGACAAGGATAAAG
ACTCTCTCAAGATCCGAAAGAAGACCAAATCCCAATCCCAATCCCGCGGA
AAACGACGCCGTAAGCATCACCGCCATTCttcccattccgattccgattc
tgattccgattcATACTCTTCCTCCTCCATCTCAGATCTCTCCAGAAGTG
AAACCTCTTCTGATAGTGAGCATGAAACATCTCATCGTTCAAATAGGCAC
AAAAGGAGCGACAGACCAAAGAAGAATAAGGAAAAGGAACGAAGTAAAAG
CCACCGCCATAAGCGACAGAAGCATAAAGTAAAAGAGAAGCAGCATGATG
AGAGGAGTAGCAGCCCTGTGCAGCTTTCCAAGTTTTTAGGGCGTGACAAA
GATGATGGTGTCCGTCGAAGTGCTGTATCTGGCAAGAAGATTCTTCTGAA
ACTTGAAAAGACAAAGGAAGATAAGGTGGCTGAAAGCAAGAGAAATGAAC
TGCTGAACTTTTTAAATGCTAGTTTTGATTAG
back to top

protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_08296.2

>drCajCajn.Asha.2.0.Cc_v2.0_08296.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_08296.2; Name=drCajCajn.Asha.2.0.Cc_v2.0_08296.2; organism=Cajanus cajan; type=polypeptide; length=193bp
MAASSSSLSSSDDSSPHRRRRHHRHRRDRDKDKDSLKIRKKTKSQSQSRG
KRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRH
KRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDK
DDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
back to top

mRNA from alignment at CcLG03_v2.0:50403693..50406478+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_08296.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_08296.2; Name=Cc_v2.0_08296.2; organism=Cajanus cajan; type=mRNA; length=2786bp; location=Sequence derived from: CcLG03_v2.0:50403693..50406478+ (Cajanus cajan
TCGGTGTGTGTTGGGCTCGGGTCAATCTAAAGGCAAACCCTCGCTTGCAA GTCGCAAGTTTGTGATGGCGGCCTCTTCGTCCTCTCTCTCTTCCTCCGAC GACTCTTCTCCTCACCGCCGCAGGCGTCATCACCGCCATCGCCGAGACCG TGACAAGGATAAAGACTCTCTCAAGATCCGAAAGAAGACCAAATCCCAAT CCCAATCCCGCGGAAAACGACGCCGTAAGCATCACCGCCATTCttcccat tccgattccgattctgattccgattcATACTCTTCCTCCTCCATCTCAGA TCTCTCCAGGTTCCATATAACCCTTGCATAACTGATGACAGACGCATttc ttttaattatattattttgtattattattatcatgtatGTGCTATGCTTC AAAGGCAAATTCAATACGATTTATGGACCTTGCAATTTTCGTAGCTTTGT GTTCTCACATCCTTTAGGATCCGTGAATCTTAGTTTATCATAAAAATACA ATTAATAATTTCCGACCATTGTAAGGGAGACAGCGTATATAAAAATACTA GTTTATTAGAATTTTTTCGCTGTCTTAGGGCCTAGTGGATGTTTATTACA GCAGAATTGATGTTTATGGAATTGGGGAATGGGATGGATGTTCATGTTCC AACATTTTGATCTCTCATGCAATCCGTTTTGTTCCATTTCATCTTGTCAT TTTTTTTGTGCGTGGTGTTTGGTAATGATGGGAATTGTGAAATGGAATCA TACTGATGAAAATTTATCGGAAAATGGATTTTGAAAACGCTTGCCATTGA CCGAGCTTATTCTCACTCTCCTTTGCGTGTATCCTTCCTTCCCCCTTTAC CACATTTCGCATATTGAGTTTCTTCTTTACATATCTGATTGTTATATTAT TCATTCATTTGTTGTCCCGTATTTACTATGGATTTTGAAAGATGATTTCT CCAAAATGTTTAATGTTTTATAAATTGTGTGCCTTATACAAGACACCAAA TCATTTTGCATTAGTTACTTTACTTTCAGTGTAGCTGCTTGTTTGTACTA TATGTTATTGATTTTAAAAATTTGCATGTTAATAACTTAATGAGTGGATT AATTTTACTTTATCATAATATTTTGTTCACTATATCACTTCAGAAGTGAA ACCTCTTCTGATAGTGAGCATGAAACATCTCATCGTTCAAATAGGCACAA AAGGAGCGACAGACCAAAGAAGGTGATTTGTTGGTAACACACTTTTTCTT AATTTATAATCTTGTCCATTTACCTCACATCCCCCCTTTACCCATTTACC CTCCAGAATAAGGAAAAGGAACGAAGTAAAAGCCACCGCCATAAGCGACA GAAGCATAAAGTAAAAGAGGTAGGTCACTTTTTCATACCTTGTTTATTGT CTTCTATTGGCTTGTTCAAAATCATTTGGTATTCTTCATATTTAAAGTTT CTAACTTGAGTGGCCTTGTAATGTCTACTATGCACGAGGGCTTGTTTCGT CTAAATCATCACCGTCCTTGTAAACTTGAATCAGCATATTTAATAATAAT TACCGGAAGTTTTGCTACATGGATTCTTATTTAAATCCATGATTTACTTT AGACACACCCATATAGTTTTGTATTATTCTATCTTCTTCTGTAGCTTGAA AACATTGGTTTGAAATCATTGGTTCTGAATGAACTAATAATGCATTAGTA TATAACAGCAAATTATTTATCTTGCTGCAAACTTGCAGACTTTTCCATAT ACAAAGTTTTTACATTCCAGTCTGAGATGCTTATGATACTTTCTGCCTAT TTTATGTATTGGCTCTTTGAAATTGGAGCTGGGATCTGTGACATGTTTGG GCGCTTCATTGACTTGCTTGGATGTTGTTTCTTGGTGGGGTTTGTCCTGG CAATGGGAGCTTTATATAGAAGCAGCATGATGAGAGGAGTAGCAGCCCTG TGCAGCTTTCCAAGGTTTTTATTGTAATCTAGCTCAACAATTCAATGCAT TTACTTGCTTCCATGGTTTTTTTATTTTCCTAGCTTTTTGTACTTGAACA GTTTTTAGGGCGTGACAAAGATGATGGTGTCCGTCGAAGTGCTGTATCTG GCAAGAAGGTATGGATGTGTTATTTGATTGTACCTTTGTTTTGGTCCCTG TTATTGGCCGTAACCTCTCTTGATTTTTTTTATTTTTATTTTTTAAGATT CTTCTGAAACTTGAAAAGACAAAGGAAGATAAGGTGGCTGAAAGCAAGAG AAATGAACTGCTGAACTTTTTAAATGCTAGTTTTGATTAGCATTGAGAAG TTATGGAGTTGATAGGGGGTACCACAAAATCTGCATAGAACCAAATTTAT TTACATGGCTGCATAAGTTATTTTTCCATTATAAGAACGAGGCAGCCTAC CACTTCCCTTGGGGAGGGGAATATATTGATGTCGTGCTTACCTTTGAAAG ACATTAAGATTAGTGGGTTTCTCTTTTGTGAGATTTGCTGAGTTTTTGTA GGATGAGAAGATTTTGACCCAGCAGATTCCATACATGGTATTTTGAGATT GGGGTAATCATTGTGTTATGAGCCAAGattattatttttttttaaatttt tttttgtgttgtttatttAGTCACATATGACTGAGTTGTTGTTCCCCTCT TTTACCTCGATATTTTTTCTGAAAATAGGTTTGGATCGAATTGCATCAAC ATAAGGATCTTAGGTTTTTAATTAATGGCATCCCCTGTTACCTTGGAATG GAGCAACGTGTTCTCTCGATATATGATTACTTATCC
back to top

Coding sequence (CDS) from alignment at CcLG03_v2.0:50403693..50406478+

>drCajCajn.Asha.2.0.Cc_v2.0_08296.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_08296.2; Name=Cc_v2.0_08296.2; organism=Cajanus cajan; type=CDS; length=582bp; location=Sequence derived from: CcLG03_v2.0:50403693..50406478+ (Cajanus cajan
ATGGCGGCCTCTTCGTCCTCTCTCTCTTCCTCCGACGACTCTTCTCCTCA
CCGCCGCAGGCGTCATCACCGCCATCGCCGAGACCGTGACAAGGATAAAG
ACTCTCTCAAGATCCGAAAGAAGACCAAATCCCAATCCCAATCCCGCGGA
AAACGACGCCGTAAGCATCACCGCCATTCttcccattccgattccgattc
tgattccgattcATACTCTTCCTCCTCCATCTCAGATCTCTCCAGAAGTG
AAACCTCTTCTGATAGTGAGCATGAAACATCTCATCGTTCAAATAGGCAC
AAAAGGAGCGACAGACCAAAGAAGAATAAGGAAAAGGAACGAAGTAAAAG
CCACCGCCATAAGCGACAGAAGCATAAAGTAAAAGAGAAGCAGCATGATG
AGAGGAGTAGCAGCCCTGTGCAGCTTTCCAAGTTTTTAGGGCGTGACAAA
GATGATGGTGTCCGTCGAAGTGCTGTATCTGGCAAGAAGATTCTTCTGAA
ACTTGAAAAGACAAAGGAAGATAAGGTGGCTGAAAGCAAGAGAAATGAAC
TGCTGAACTTTTTAAATGCTAGTTTTGATTAG
back to top