Cc_v2.0_26972.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cc_v2.0_26972.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TT85|A0A151TT85_CAJCA (Spermidine synthase OS=Cajanus cajan OX=3821 GN=KK1_009447 PE=4 SV=1) HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0 Query: 14 MFLGNSIPPPRPPTRISLSPKCEQQKTQDDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLWMPYSH 308 MFLGNSIPPPRPPTRISLSPKCEQQKTQDDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLWMPYSH Sbjct: 1 MFLGNSIPPPRPPTRISLSPKCEQQKTQDDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLWMPYSH 295
BLAST of Cc_v2.0_26972.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445G413|A0A445G413_GLYSO (Spermidine synthase OS=Glycine soja OX=3848 GN=D0Y65_045267 PE=4 SV=1) HSP 1 Score: 497.278 bits (1279), Expect = 5.058e-175 Identity = 243/304 (79.93%), Postives = 274/304 (90.13%), Query Frame = 0 Query: 15 FLGNSIPPPRPPTRISLS---------PKCEQQ-KTQDDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLWMPYSH 308 FL NSIP P TR+SLS KC+QQ KTQ+DGIPA++VKILAKFKSRHN+IRVLEVSRKA+HPFRGSRLLLLD PGNIHSISFLFK+LTNTYFDVFATLPP++PPGPLALLGFGAGTAAR+LL HP+A+LH WELDPAV+QVAREYFNLARLERD+++RLFIYVG+AL+A+VPNGFSGIVVDLFSKGSLIPELQDPATW+ LRGRL+K GRIMVNVGGSCVEAENR+RDGKVVM +TL AM+EVFG+ +FV+SLGNRKDDSSLALTGDLP L++WKNRLPGP K Y D+W PYSH Sbjct: 17 FLRNSIPSP---TRVSLSLKTPCSSLTAKCQQQQKTQEDGIPADEVKILAKFKSRHNYIRVLEVSRKAEHPFRGSRLLLLDTPGNIHSISFLFKSLTNTYFDVFATLPPIVPPGPLALLGFGAGTAARLLLLHHPSALLHCWELDPAVIQVAREYFNLARLERDNQDRLFIYVGDALNATVPNGFSGIVVDLFSKGSLIPELQDPATWRMLRGRLRKGGRIMVNVGGSCVEAENRLRDGKVVMEETLGAMKEVFGKKVFVLSLGNRKDDSSLALTGDLPHLEEWKNRLPGPFKCYADMWTPYSH 317
BLAST of Cc_v2.0_26972.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445G411|A0A445G411_GLYSO (Spermidine synthase OS=Glycine soja OX=3848 GN=D0Y65_045267 PE=4 SV=1) HSP 1 Score: 494.582 bits (1272), Expect = 2.124e-174 Identity = 242/304 (79.61%), Postives = 273/304 (89.80%), Query Frame = 0 Query: 15 FLGNSIPPPRPPTRISLS---------PKCEQQ-KTQDDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLWMPYSH 308 FL NSIP P TR+SLS KC+QQ KTQ+DGIPA++VKILAKFKSRHN+IRVLEVSRKA+HPFRGSRLLLLD PGNIHSISFLFK+LTNTYFDVFATLPP++PPGPLALLGFGAGTAAR+LL HP+A+LH WELDPAV+QVAREYFNLARLERD+++RLFIYVG+AL+A+VPNGFSGIVVDLFSKGSLIPELQDPATW+ LRGRL+K GRIMVNVGGSCVEAENR+RDGKVVM +TL AM+EVFG+ +FV+SLGNRKDDSSLALTGDLP L++WKNRLPGP K Y D+W PYS Sbjct: 17 FLRNSIPSP---TRVSLSLKTPCSSLTAKCQQQQKTQEDGIPADEVKILAKFKSRHNYIRVLEVSRKAEHPFRGSRLLLLDTPGNIHSISFLFKSLTNTYFDVFATLPPIVPPGPLALLGFGAGTAARLLLLHHPSALLHCWELDPAVIQVAREYFNLARLERDNQDRLFIYVGDALNATVPNGFSGIVVDLFSKGSLIPELQDPATWRMLRGRLRKGGRIMVNVGGSCVEAENRLRDGKVVMEETLGAMKEVFGKKVFVLSLGNRKDDSSLALTGDLPHLEEWKNRLPGPFKCYADMWTPYSQ 317
BLAST of Cc_v2.0_26972.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1MTD9|I1MTD9_SOYBN (PABS domain-containing protein OS=Glycine max OX=3847 GN=100819757 PE=4 SV=1) HSP 1 Score: 494.582 bits (1272), Expect = 2.124e-174 Identity = 242/304 (79.61%), Postives = 273/304 (89.80%), Query Frame = 0 Query: 15 FLGNSIPPPRPPTRISLS---------PKCEQQ-KTQDDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLWMPYSH 308 FL NSIP P TR+SLS KC+QQ KTQ+DGIPA++VKILAKFKSRHN+IRVLEVSRKA+HPFRGSRLLLLD PGNIHSISFLFK+LTNTYFDVFATLPP++PPGPLALLGFGAGTAAR+LL HP+A+LH WELDPAV+QVAREYFNLARLERD+++RLFIYVG+AL+A+VPNGFSGIVVDLFSKGSLIPELQDPATW+ LRGRL+K GRIMVNVGGSCVEAENR+RDGKVVM +TL AM+EVFG+ +FV+SLGNRKDDSSLALTGDLP L++WKNRLPGP K Y D+W PYS Sbjct: 17 FLRNSIPSP---TRVSLSLKTPCSSLTAKCQQQQKTQEDGIPADEVKILAKFKSRHNYIRVLEVSRKAEHPFRGSRLLLLDTPGNIHSISFLFKSLTNTYFDVFATLPPIVPPGPLALLGFGAGTAARLLLLHHPSALLHCWELDPAVIQVAREYFNLARLERDNQDRLFIYVGDALNATVPNGFSGIVVDLFSKGSLIPELQDPATWRMLRGRLRKGGRIMVNVGGSCVEAENRLRDGKVVMEETLGAMKEVFGKKVFVLSLGNRKDDSSLALTGDLPHLEEWKNRLPGPFKCYADMWTPYSQ 317
BLAST of Cc_v2.0_26972.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3T9Z6|A0A1S3T9Z6_VIGRR (Uncharacterized protein LOC106753307 OS=Vigna radiata var. radiata OX=3916 GN=LOC106753307 PE=4 SV=1) HSP 1 Score: 485.337 bits (1248), Expect = 1.706e-170 Identity = 239/325 (73.54%), Postives = 274/325 (84.31%), Query Frame = 0 Query: 1 MWTKVCWAQIQTPMFLGNSIPPP--RPPTRISLS-----------PKCEQQ-----KTQDDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLWMPYS 307 M T + AQ Q MFL NS P PT ISL+ KC++Q KTQDDGIPAE+VK LAKFKSRHN+IRVLEVSRKA+HPFRGSRLLLLD PGNIHSISFLF +LT TYFDVFATLPP+LP GP+ALLGFGAGTAAR+LLD +P A+LH WELDPAV+QVAREYFNL +LER++++RLFIY+GNAL+A+VPNGFSGIVVDLFSKG LIPELQ+PATW+KLRG+L+K GRIMVNVGGSCVE E+R+RDGKVVM +TLRAM+EVFGE LFV++LGNRKDDSSLALTGDLPP ++WK RLPGPLKSY +WMPYS Sbjct: 1 MRTVISSAQSQPQMFLRNSAPIQVRHTPTGISLALKPPSSSSSLVAKCQKQPQQHQKTQDDGIPAEEVKTLAKFKSRHNYIRVLEVSRKAEHPFRGSRLLLLDGPGNIHSISFLFTSLTKTYFDVFATLPPILPSGPIALLGFGAGTAARLLLDHYPQAILHGWELDPAVIQVAREYFNLGKLERENQQRLFIYIGNALNATVPNGFSGIVVDLFSKGCLIPELQEPATWEKLRGQLRKGGRIMVNVGGSCVEPESRLRDGKVVMQETLRAMKEVFGEELFVLNLGNRKDDSSLALTGDLPPPEEWKKRLPGPLKSYTQMWMPYS 325
BLAST of Cc_v2.0_26972.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3R681|A0A0S3R681_PHAAN (PABS domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G400200 PE=4 SV=1) HSP 1 Score: 478.789 bits (1231), Expect = 6.078e-168 Identity = 241/323 (74.61%), Postives = 275/323 (85.14%), Query Frame = 0 Query: 1 MWTKVCWAQIQTPMFLGNSIPPP--RPPTRISLS---------PKCEQQKTQ-----DDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLWMPYS 307 M T + AQ Q MFL NS P PTRISL+ KC+QQ+ Q DDGIPAE+VKILAKFKSRHN+IRVLEVSRKA+HPFRGSRLLLLD PGNIHSISFLF +LT TYFDVFATLPP+LP GP+ALLGFGAGTAAR+LLD +P AVLH WELDPAV+QVAREYFNL +LER++++RLFIY+GNAL+A+VPNGFSGIVVDLFSKG LIPELQ+PATW+KLRG+L+K GRIMVNVGGSCVE E+R+RDGKVVM +TLRAM+EVFGE LFV++LGNRKDDSSLALTGDLPP ++WK RLPGPLKSY +WMPYS Sbjct: 1 MRTVISSAQSQPQMFLRNSAPVQVRHSPTRISLALKPPSSSLVVKCQQQRQQHQKTQDDGIPAEEVKILAKFKSRHNYIRVLEVSRKAEHPFRGSRLLLLDGPGNIHSISFLFTSLTKTYFDVFATLPPILPSGPIALLGFGAGTAARLLLDHYPQAVLHGWELDPAVIQVAREYFNLGKLERENQQRLFIYIGNALNATVPNGFSGIVVDLFSKGCLIPELQEPATWEKLRGQLRKGGRIMVNVGGSCVEPESRLRDGKVVMQETLRAMKEVFGEELFVLNLGNRKDDSSLALTGDLPPPEEWKKRLPGPLKSYTQMWMPYS 323
BLAST of Cc_v2.0_26972.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MW55|A0A4D6MW55_VIGUN (Spermidine synthase OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g711 PE=4 SV=1) HSP 1 Score: 476.863 bits (1226), Expect = 3.798e-167 Identity = 238/324 (73.46%), Postives = 275/324 (84.88%), Query Frame = 0 Query: 1 MWTKVCWAQIQTPMFLGNSIPPPRPP--TRISLS----------PKCEQQKTQ-----DDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLWMPYS 307 M T + AQ Q MF NS+P P P TRISL+ KC QQ+ Q D+GIPAE+VKILAKFKSRHN+IRVLEVSRKA+H FRGSRLLLLDAPGNIHS+SFLF +LT TYFDVFATLPP+LP GP+ALLGFGAGTAAR+LLDL+P AVLH WELDPAV+QVAREYFNL +LER++++RLFIY+GNAL+A+V NGFSGIVVDLFS+G LIPELQ+PATW+KLRGRL+K GRIMVNVGGSCVE E+R+RDGKVVM +TLRAM+EVFG+ LFV++LGNRKDDSSLALTGDLPP ++WK RLPGPLKSY +WMPYS Sbjct: 1 MRTVILTAQTQPQMFFRNSVPLPLAPKPTRISLALKPLSSSSLVAKCHQQRQQHQKTQDEGIPAEEVKILAKFKSRHNYIRVLEVSRKAEHHFRGSRLLLLDAPGNIHSVSFLFTSLTKTYFDVFATLPPILPSGPIALLGFGAGTAARLLLDLYPNAVLHGWELDPAVIQVAREYFNLGKLERENQQRLFIYIGNALNATVHNGFSGIVVDLFSQGCLIPELQEPATWEKLRGRLRKGGRIMVNVGGSCVEPESRLRDGKVVMEETLRAMKEVFGKELFVLNLGNRKDDSSLALTGDLPPSEEWKKRLPGPLKSYTQMWMPYS 324
BLAST of Cc_v2.0_26972.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6L0L7|A0A4D6L0L7_VIGUN (Spermidine synthase OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g1358 PE=4 SV=1) HSP 1 Score: 474.167 bits (1219), Expect = 4.053e-166 Identity = 231/320 (72.19%), Postives = 268/320 (83.75%), Query Frame = 0 Query: 1 MWTKVCWAQIQTPMFLGNSIP------PPR------PPTRISLSPKCEQQ--KTQDDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLWMPY 306 M T + AQ Q MFL NS P P R PP+ SL K +QQ KTQDDGIPAE+VKIL KFKSRHN+IRVLEVSRKA+HP GSRLLLLD PGNIHSISFLF +LT TYFDVFATLPP+LP GP+ALLGFGAGTAAR+LLD +P AVLH WELDPAV+QVAREYFNL +LER++++RLFIY+GNAL+A+VPNGFSGI+VDLFSKG LIPELQ+PATW+KLRGRL+K GRIMVNVGGSCVE E+R+RDGKVVM +TL AM+EVFG+ LFV++LGNRKDDSSLALTG++PP ++WK +LP PLK Y +WMPY Sbjct: 1 MRTVISTAQTQPQMFLRNSAPLQVRHIPARISLVLKPPSTSSLVAKSQQQHQKTQDDGIPAEEVKILVKFKSRHNYIRVLEVSRKAEHPLSGSRLLLLDGPGNIHSISFLFTSLTKTYFDVFATLPPILPSGPIALLGFGAGTAARLLLDHYPNAVLHGWELDPAVIQVAREYFNLGKLERENQQRLFIYIGNALNATVPNGFSGIIVDLFSKGCLIPELQEPATWEKLRGRLRKGGRIMVNVGGSCVEPESRLRDGKVVMEETLMAMKEVFGKELFVLNLGNRKDDSSLALTGEMPPSEEWKKKLPDPLKCYTQMWMPY 320
BLAST of Cc_v2.0_26972.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TQR4|A0A0L9TQR4_PHAAN (PABS domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan01g232800 PE=4 SV=1) HSP 1 Score: 471.47 bits (1212), Expect = 2.548e-165 Identity = 236/310 (76.13%), Postives = 269/310 (86.77%), Query Frame = 0 Query: 14 MFLGNSIPPP--RPPTRISLS---------PKCEQQKTQ-----DDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLWMPYS 307 MFL NS P PTRISL+ KC+QQ+ Q DDGIPAE+VKILAKFKSRHN+IRVLEVSRKA+HPFRGSRLLLLD PGNIHSISFLF +LT TYFDVFATLPP+LP GP+ALLGFGAGTAAR+LLD +P AVLH WELDPAV+QVAREYFNL +LER++++RLFIY+GNAL+A+VPNGFSGIVVDLFSKG LIPELQ+PATW+KLRG+L+K GRIMVNVGGSCVE E+R+RDGKVVM +TLRAM+EVFGE LFV++LGNRKDDSSLALTGDLPP ++WK RLPGPLKSY +WMPYS Sbjct: 1 MFLRNSAPVQVRHSPTRISLALKPPSSSLVVKCQQQRQQHQKTQDDGIPAEEVKILAKFKSRHNYIRVLEVSRKAEHPFRGSRLLLLDGPGNIHSISFLFTSLTKTYFDVFATLPPILPSGPIALLGFGAGTAARLLLDHYPQAVLHGWELDPAVIQVAREYFNLGKLERENQQRLFIYIGNALNATVPNGFSGIVVDLFSKGCLIPELQEPATWEKLRGQLRKGGRIMVNVGGSCVEPESRLRDGKVVMQETLRAMKEVFGEELFVLNLGNRKDDSSLALTGDLPPPEEWKKRLPGPLKSYTQMWMPYS 310
BLAST of Cc_v2.0_26972.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7CDU4|V7CDU4_PHAVU (PABS domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G203700g PE=4 SV=1) HSP 1 Score: 467.233 bits (1201), Expect = 2.427e-163 Identity = 235/328 (71.65%), Postives = 271/328 (82.62%), Query Frame = 0 Query: 1 MWTKVCWAQIQTPMFLGNSIPPPRPPTRISLSPK---------------------CEQQKTQDDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLWMPYS 307 M T + Q Q FL NSIPPP P R+ L+P +QQKTQD+GIPAE+VKIL KFKSRHN+IRVLEVSRKADHPFRGSRLLLLD PGNIHSISFLF +LT TYFDVFATLPP+LP GP+ALLGFGAGTAAR+LLD +P AVLH WELDPAV+QVAREYF L +LER++++RLFIY+GNAL+A+VPNGFSGIVVDLFSKG LIPELQ+PATW+KLRG+L+K GRIMVNVGGSCVE E+R+RDGKVVM +TLRAM++VFG+ LFV++LGNRKDDSSLALTGDLPP ++WK RLPGPLK Y +WMPYS Sbjct: 1 MRTVLSCPQTQPQRFLRNSIPPPTHPLRLHLTPTRISLSLKLPSSSLLVKCQKQPQQQQKTQDEGIPAEEVKILVKFKSRHNYIRVLEVSRKADHPFRGSRLLLLDGPGNIHSISFLFTSLTKTYFDVFATLPPILPSGPIALLGFGAGTAARLLLDHYPHAVLHGWELDPAVIQVAREYFGLGKLERENQQRLFIYIGNALNATVPNGFSGIVVDLFSKGCLIPELQEPATWEKLRGQLRKGGRIMVNVGGSCVEPESRLRDGKVVMEETLRAMKKVFGKKLFVLNLGNRKDDSSLALTGDLPPPEEWKKRLPGPLKCYTQMWMPYS 328
BLAST of Cc_v2.0_26972.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:25314434-25315423 REVERSE LENGTH=329) HSP 1 Score: 357.066 bits (915), Expect = 2.104e-123 Identity = 185/296 (62.50%), Postives = 233/296 (78.72%), Query Frame = 0 Query: 13 PMFLGNSIPPPRPPTRISLSPKCEQQKTQDDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAV-LHAWELDPAVLQVAREYFNLARLERDHKERLFIYVGNALDASVPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENRMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLP-GPLKSYPDLWMPY 306 P+ L PP+ P I + D+GIPAEDVK +AKFKSRHN+IRV+EVSRK +HP GSRLLLLD PGNIHSISFL KTLT++YFDVFATLPP++PPGP+ +LGFGAG+ AR++L+L+P + +H WELDP+V+ V RE+F L++LERDHK+R+FI +G+AL+ASV GFSGI+VDLFSKGS+I ELQDP W+ L+ RL+ GRIMVNVGG CVEAE+ RDG +VM +TLR M +VFG+ LFV++LGN +DSS+ALTGDLP L WK RLP L+SY D+W+PY Sbjct: 28 PLTLNLRPKPPQNPIFIRTDSHRNKTSADDNGIPAEDVKTIAKFKSRHNYIRVIEVSRKTNHPLAGSRLLLLDNPGNIHSISFLLKTLTDSYFDVFATLPPIIPPGPIGILGFGAGSTARLILELYPPEIAVHGWELDPSVIDVGREFFGLSKLERDHKDRIFINIGDALNASVKTGFSGILVDLFSKGSVIKELQDPQVWEDLKSRLRYRGRIMVNVGGKCVEAEDSDRDGALVMEETLRVMSQVFGDKLFVLTLGN-GNDSSVALTGDLPDLDAWKKRLPRSELRSYVDMWIPY 322
BLAST of Cc_v2.0_26972.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:17989867-17991519 FORWARD LENGTH=333) HSP 1 Score: 164.081 bits (414), Expect = 5.156e-48 Identity = 104/302 (34.44%), Postives = 166/302 (54.97%), Query Frame = 0 Query: 8 AQIQTPMFLGNSIPPPRPPTRISL--SPKCEQQKTQDDGIPAEDVK----ILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHS-ISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLERDHKE--RLFIYVGNALDAS--VPNGFSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENR-----MRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLP 293 +Q P+FL S PR L S E+Q QD E+ + ++ +SR+N I +++ + SR LLLD+ N+HS I+ + T +Y+D FA+LPP++P GP+A+ G G GTAAR++L+L P L WE+D +++ AR+Y L+ LE+ + RL ++V +AL S V ++GI+VDLF+ G ++ +LQ+ W +L RL GRIMVN G E +N + D +++ T++ + E F + + + + LALTG LP L DW +++P Sbjct: 26 SQFSKPLFLNQSQNKPRFSISFCLKQSNHDERQIQQDSAKEEEEEEEEYWVVTAVRSRYNEIVIVDTA--------SSRYLLLDSTKNVHSVINKGGQNWTGSYWDEFASLPPIIPNGPVAIYGLGGGTAARLMLELWPTMQLEGWEIDEILIEKARDYLGLSELEKPTSKGGRLCVHVDDALSPSQDVSGRYAGIIVDLFADGKVLDQLQEVPIWLELASRLMPNGRIMVNCAGIETELQNGKPQLLLDDSAGMLNSTVKILSEAFPGQVCWKRTPDSEGLNFLALTGGLPDLSDWSSKVP 319
BLAST of Cc_v2.0_26972.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:17987591-17989227 FORWARD LENGTH=331) HSP 1 Score: 150.984 bits (380), Expect = 5.173e-43 Identity = 99/309 (32.04%), Postives = 164/309 (53.07%), Query Frame = 0 Query: 8 AQIQTPMFLGNSIPPPRPPTRISLSPKCEQQKT---QDDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHS-ISFLFKTLTNTYFDVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLE--RDHKERLFIYVGNALDASVPNG--FSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAENR-----MRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLW 303 +Q P+F+ + + R S+S +Q ++ Q + E+ ++ KSR+N I +++ SR LLLD+ N+HS I+ + T Y+D A LPP++P GP+A+ G G GTAAR++L+L P+ L WE+D +++ AR+Y L+ LE RL I+V +AL + ++GI+VDLF+ G ++ +LQ+ W +L RL GR+MVN G E +N + D +++ T++ + E F + + + + +ALTG LP L DW +++P L LW Sbjct: 19 SQFSKPLFINQT----QKKLRFSISFCLKQNESGIEQVEEEEEEEFTVVTAVKSRYNEIVIVDT--------FASRYLLLDSTRNVHSVINKGGQNWTGAYWDESACLPPIIPNGPIAIYGLGGGTAARLILELWPSTELEGWEIDEILIEKARDYLGLSELEIPTSKGGRLCIHVDDALSPCQDDSKRYAGIIVDLFADGKVLDQLQEIPMWLELASRLMPNGRLMVNCAGIETEVKNGKPELVLDDLAWMLNSTVKILSEAFPGQVSWKRTPDSEGLNFVALTGGLPDLSDWSSKVPVRLSESVKLW 315
BLAST of Cc_v2.0_26972.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:17987591-17989227 FORWARD LENGTH=349) HSP 1 Score: 141.354 bits (355), Expect = 4.036e-39 Identity = 98/327 (29.97%), Postives = 164/327 (50.15%), Query Frame = 0 Query: 8 AQIQTPMFLGNSIPPPRPPTRISLSPKCEQQKT---QDDGIPAEDVKILAKFKSRHNHIRVLEVSRKADHPFRGSRLLLLDAPGNIHSI----------------SFLFKTLTNTYF---DVFATLPPLLPPGPLALLGFGAGTAARILLDLHPAAVLHAWELDPAVLQVAREYFNLARLE--RDHKERLFIYVGNALDASVPNG--FSGIVVDLFSKGSLIPELQDPATWQKLRGRLKKAGRIMVNVGGSCVEAEN-----RMRDGKVVMHQTLRAMREVFGESLFVMSLGNRKDDSSLALTGDLPPLQDWKNRLPGPLKSYPDLW 303 +Q P+F+ + + R S+S +Q ++ Q + E+ ++ KSR+N I +++ SR LLLD+ N+HS+ +F + +F D A LPP++P GP+A+ G G GTAAR++L+L P+ L WE+D +++ AR+Y L+ LE RL I+V +AL + ++GI+VDLF+ G ++ +LQ+ W +L RL GR+MVN G E +N + D +++ T++ + E F + + + + +ALTG LP L DW +++P L LW Sbjct: 19 SQFSKPLFINQT----QKKLRFSISFCLKQNESGIEQVEEEEEEEFTVVTAVKSRYNEIVIVDT--------FASRYLLLDSTRNVHSVINKGGQNWTGAYWVNVVIVFNFESYQHFCLKDESACLPPIIPNGPIAIYGLGGGTAARLILELWPSTELEGWEIDEILIEKARDYLGLSELEIPTSKGGRLCIHVDDALSPCQDDSKRYAGIIVDLFADGKVLDQLQEIPMWLELASRLMPNGRLMVNCAGIETEVKNGKPELVLDDLAWMLNSTVKILSEAFPGQVSWKRTPDSEGLNFVALTGGLPDLSDWSSKVPVRLSESVKLW 333 The following BLAST results are available for this feature:
BLAST of Cc_v2.0_26972.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Cc_v2.0_26972.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot ) Total hits: 0
BLAST of Cc_v2.0_26972.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11) Total hits: 4
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCajCajn.Asha.2.0.Cc_v2.0_26972.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_26972.1; Name=Cc_v2.0_26972.1; organism=Cajanus cajan; type=mRNA; length=927bpback to top protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_26972.1 >drCajCajn.Asha.2.0.Cc_v2.0_26972.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_26972.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_26972.1; organism=Cajanus cajan; type=polypeptide; length=308bpback to top mRNA from alignment at CcLG11_v2.0:42958608..42959691+ Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>drCajCajn.Asha.2.0.Cc_v2.0_26972.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_26972.1; Name=Cc_v2.0_26972.1; organism=Cajanus cajan; type=mRNA; length=1084bp; location=Sequence derived from: CcLG11_v2.0:42958608..42959691+ (Cajanus cajanback to top Coding sequence (CDS) from alignment at CcLG11_v2.0:42958608..42959691+ >drCajCajn.Asha.2.0.Cc_v2.0_26972.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_26972.1; Name=Cc_v2.0_26972.1; organism=Cajanus cajan; type=CDS; length=927bp; location=Sequence derived from: CcLG11_v2.0:42958608..42959691+ (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|