Cc_v2.0_19476.1

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_19476.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19476.1; Name=Cc_v2.0_19476.1; organism=Cajanus cajan; type=mRNA; length=912bp
ATGGCGTCACGGGACAACAAGAAGCAATCCAAGGCCTCCAGTAGCCGAGC
AGGCCGAATCCGCACGCTctccgatctgaatcgtccctccgccgactccg
acagcgactccgaTGGCCCCCAGGAGTACTACACCGGCGGGGAGAAGAGT
GGAATGCTTGTCCAGGATCCTTCAAAGGGAAATGATGTGGATGCAATTTT
CAATCAAGCTAGGCAACTTGGTGCTGTTGAAAGGCCTCTTGATCAGCTTC
AGGAGCCTCCAAGGTCAACTAGCTTTGCTGGAACTGGCAGGTTACTCTCG
GGGGAAACTACACAATCTACTAACCAGCAACCTGAGGCAGTTGTTCACAA
CATTATTTTCTGGAGTAATGGTTTCACTGTAAATGATGGACCTCTGAGGA
GATTGGACGATCCTGAAAATGCCTCATTTTTAgagAGCATAAAAAAATCT
GAGTGTCCCAAAGAACTTGAACCTGCAGATAGGAGGTCATCTGTTAATGT
TAACCTCATAAGGAGGAATGAGAACTGTCCCGAACCCGAAAAGCAGCATG
TTCCATTTCAGGGAGTGGGAAGAACTCTTGGAAGCAGCTCTTCATCAATG
ACTCCTGATCCAACTGTTGCCTCAACACCTCTCAATGCAGCGCCAACTCC
TTCTGCTGGCCTGGTAGTTGATCAATCATTGCCATCAACATCAATACAAC
TCAGGTTGGCTGATGGAACCCGCTTGATATCACATTTTAATAATCACCAC
ACTATCCGCGACATCCGTGCCTTCATTGATGCATCTAGACCTGGGGGCCG
ACAGGCTTATCAACTTCAGCTGATGGGTTTCCCCCCAAAGGTTCTAGCTG
ATGAAACTCAGACTATAGAGCAGGCAGGACTAGCAAATTCAGTTGTGATA
CAGAAATTCTAG
back to top

protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_19476.1

>drCajCajn.Asha.2.0.Cc_v2.0_19476.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19476.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_19476.1; organism=Cajanus cajan; type=polypeptide; length=303bp
MASRDNKKQSKASSSRAGRIRTLSDLNRPSADSDSDSDGPQEYYTGGEKS
GMLVQDPSKGNDVDAIFNQARQLGAVERPLDQLQEPPRSTSFAGTGRLLS
GETTQSTNQQPEAVVHNIIFWSNGFTVNDGPLRRLDDPENASFLESIKKS
ECPKELEPADRRSSVNVNLIRRNENCPEPEKQHVPFQGVGRTLGSSSSSM
TPDPTVASTPLNAAPTPSAGLVVDQSLPSTSIQLRLADGTRLISHFNNHH
TIRDIRAFIDASRPGGRQAYQLQLMGFPPKVLADETQTIEQAGLANSVVI
QKF
back to top

mRNA from alignment at CcLG08_v2.0:53490555..53494763+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_19476.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19476.1; Name=Cc_v2.0_19476.1; organism=Cajanus cajan; type=mRNA; length=4209bp; location=Sequence derived from: CcLG08_v2.0:53490555..53494763+ (Cajanus cajan
AAAtatttattgtttattatttatttagtagtaatagattatatatttTG TAAGAAAAAAGTGAAGTATAAGCAGGAGCGTGTGAATTTAAATAAGAAAA GAAAAATAATTGAATGAGATGATTTTTATGTAACCGATCGATTACAGTAG CGCAGCGTGGTATTTAGGCTTCTTAAGAAGAAGACAGATCGTAAGTGGTA ACTACTTGGCAACGACGCGACGCAAAGCATTGGAGTGAGTGACATCAACG TAGCTCTCTCTCCATTGCGCCACCGAATACGAGACGCTGTCCCTTCTCCT CTCAAATCTTAATCGCCATGGCGTCACGGGACAACAAGAAGCAATCCAAG GCCTCCAGTAGCCGAGCAGGCCGAATCCGCACGCTctccgatctgaatcg tccctccgccgactccgacagcgactccgaTGGCCCCCAGGAGTACTACA CCGGCGGGGAGAAGAGGTATAATTATCCATACATTATATGAGAACAGGCG CTGATTCCATAATaaacgaaaacagcacaattcaaaacaaaatcaaaaca CGCTTTATCGCGGTAGCAACTTCTGTGTTTCACTTTGTGTGCGTAAATGT GTTGCATGATATATTGCCTTACATGCTATTGCTGAATGAATTATTAGAGT TGACTGAAATCAAGCTACCGGTCAAAGAACTAGGTTAGGTTAGGTTTTAG GAACAGTTTTTTTTTTCTTCTTCCAATCGTGTAAAATTTTAGCATGATTT TGTGTATTTTTGAAATTAGAGTTACAAtttgtgctgctgtgtttcagttt gtcttctaaatgattatgttttggtgtcgttattgttttgttttgtttat cttctaatggttgaggattgtgattgttttgtgtttgtTGATTGCTCTTG CCTGGGTTAAGTTGATTGATGTACGTACCCTTGTGCTGCCACACTTATTA GCATACTGCTTTATAAGTAAAAGGTTTTTCAAATAGAAATAAGTGGTTAG ATTTCAGTTTATTCTTTTGTGCTTTTACTTGTACAAAGTGTTTTCAGAAT TTCCTCAACCTCATTGTTTGGTGGAAGGATTGAAAGCATTTGAAAACTTG TCTAAAGGCATTAAAAACAATAAAATCATGCTTTTGATGAGAGCTTTTAC AGTTTTACTTTGAAGCTGTTTTGCTTATATTTGGGTTACTTTTTTCTGGT TTAGGTGTTGGGCTTTTGAAAGCCTATTTAGTTCCAGCTCAACTTGCTAA AAGAATGGGATGAGGAAAAGAAAAAACAAAACTCAAAGAGATGTGTTTTT ATTATTTTGTGATTTCTTTTTTTGTACAAATAGACATTCTCTTTGCTCCT CCCAGGTTTTATAGCAATGCTACTGCATTTTGATATCCTTTGAAGTGAGT CTATAATGACATGTAAAGATTTATGTGATGACTGATGACGTTAAGCATTG CCCACTTGATGATTCCTTTAAGCTATTTTAAGTTCTCAAAATTTGAATTT ATCAAACTATATAACTTAGTTCCTTAAACATATAGATAGGGATAGTGACA tatatctatatttatatttttttaatgattttttttatatAGTATGTAAA ATATTCACTTTTAAGCTGTGTTTGGATGGATGGAGAAGAATGAAAAAAGG TACTTAACCCATTTTTAGAGACCTTTTAAGGTAACGAAGTGGAATGATTG AGCATGGGGACCCAAACTAGTCCTTACCGTTTAAGACAGTCATCTACAGT TTTAACTCAACACCTTAACAATAGAATCGTACCTTTCCACTTCATCAGTC CATGCAATTCCAAACAACTCCACTTCATCCTCTTCAAAATTCAAAAATGT AGCCTTATGCTTCACATGTATGCTTTACTTTTCTAGAACTTAAAACACCT TATAGTAAAAAGTCACTTTTGACTACCCTGTTGAAAGTCTTTGGACATTT GGATATTGAAAGTTGGCTTAAAGGAGGTGTATAATTGTGTTGATTTAATA AGGTTAGTGCATCTGCAAACACACTTTCTAAGTTTAATGTGCATATACAA TTTACTGGTGTCTCTAATTTTTCACAAGATTTACGGATGCAAATGTCTAT TTTCAGTTGGTTTTATGATTTGATTATTTTCTTCTGGATATTTAACAATT GCACATTATATCTCCAGTGGAATGCTTGTCCAGGATCCTTCAAAGGGAAA TGATGTGGATGCAATTTTCAATCAAGCTAGGCAACTTGGTGCTGTTGAAA GGCCTCTTGATCAGCTTCAGGAGCCTCCAAGGTCAACTAGCTTTGCTGGA ACTGGCAGGTTACTCTCGGGGGAAACTACACAATCTACTAACCAGCAACC TGAGGCAGTTGTTCACAACATTATTTTCTGGAGTAATGGTTTCACTGTAA ATGATGGACCTCTGAGGAGATTGGACGATCCTGAAAATGCCTCATTTTTA gaggtgatggtattttagtttcttattccattaaagatttgtttagctca aaggagggaagggggttagaaattttgtttggttaagaggaaaacagggg agataactctttacttgtttgatttaagtgggggaggaaagggattttaa aaactaatttatatttgtacccttattatttaaaatttagaagcataaat aagaatgttttagacattatatagatgaggaggggttttgctctcctact cctctcctaaaaattgaatgaaacaacaataagttttaaaaataaaataa aaatctctctcctctcccctccaaccaaacattatgtAATGGATTGAAGG GTAAAATAATTTGGAAGTGATGAGGTTGCCTTCCTGAAAAGGCAAATCCT GATGTCATAGAAGATTGAGTTTTTGGTGAACATTGTTCAGAAATACTGGA ACATATCTATATATTTCAGTTATAGCTTTACTTTTATTATTTATTTAAAT CCTTTCTGAAATTCTGCATTTGTTATATAAGTATTCTGGTGAGTTGCTTT CATAATCCATTGACAAGACCATGTAAGAATCTGCCGGAAATGTATTTGTG CTACTATTATTTTTTTTATTGGTTACATGAAGTGGTTTCATCGTGTTTAT GATATTTGCTATTTTTTAATGCAGAGCATAAAAAAATCTGAGTGTCCCAA AGAACTTGAACCTGCAGATAGGAGGTCATCTGTTAATGTTAACCTCATAA GGAGGAATGAGAACTGTCCCGTAAGTTTTCTGTCAGGGTTCTTTGGATTG TCTCTGTCCAATTTACTATTAAACCATGATGAATTTTGTTGGCTTTGTTC ATTAAATTTGGAGATTCTAACGTTTTGAATTTAGAAATGCAATCCAGGTC TTTTGTTATGCGCAAATAGTGAATTCACATTTTATTCATGCATACAGGAA CCCGAAAAGCAGCATGTTCCATTTCAGGGAGTGGGAAGAACTCTTGGAAG CAGCTCTTCATCAATGACTCCTGATCCAACTGTTGCCTCAACACCTCTCA ATGCAGCGCCAACTCCTTCTGCTGGCCTGGTAGTTGATCAATCATTGCCA TCAACATCAATACAACTCAGGTTGGCTGATGGAACCCGCTTGATATCACA TTTTAATAATCACCACACTATCCGCGACATCCGTGCCTTCATTGATGCAT CTAGACCTGGGGGCCGACAGGCTTATCAACTTCAGCTGATGGGTTTCCCC CCAAAGGTTCTAGCTGATGAAACTCAGACTATAGAGCAGGCAGGACTAGC AAATTCAGTTGTGATACAGAAATTCTAGCAACATGCTACATCATGCCATT AGTCTTTGCTGGCTAAATGCTGCATTGAAGGGAACCAGTTTTATTGGGGG CTTCTGGACGTGAGGTACTGTTATTTACAAAAACAGATAGGAAAACCCCA ATGTTGCGGGGGACATTTTCTTTTAATTGCTCAAAGTTTACCAAGTAATC TATTTGCTTTAAGACCAGTTGGATGGTTTAGCTTTGGACCTAATTCTTTA TCTTATGATGATTGTGTTGTGTCCACTTTCTAGCCGGGCCTTGTGACTGA ACTTGATATTATATGGAACACTTCACTGAAATGTCAGATAACCTTCAGTC ACACGTCAGTTTTTGAATATGTTAAACCAACTACCAAGTGTGGTTATATT ATATTTCATCTAAAATAAACAAAGTTGCAGCATACGTTGGCTTTGACTCT GTAAGCATA
back to top

Coding sequence (CDS) from alignment at CcLG08_v2.0:53490555..53494763+

>drCajCajn.Asha.2.0.Cc_v2.0_19476.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19476.1; Name=Cc_v2.0_19476.1; organism=Cajanus cajan; type=CDS; length=912bp; location=Sequence derived from: CcLG08_v2.0:53490555..53494763+ (Cajanus cajan
ATGGCGTCACGGGACAACAAGAAGCAATCCAAGGCCTCCAGTAGCCGAGC
AGGCCGAATCCGCACGCTctccgatctgaatcgtccctccgccgactccg
acagcgactccgaTGGCCCCCAGGAGTACTACACCGGCGGGGAGAAGAGT
GGAATGCTTGTCCAGGATCCTTCAAAGGGAAATGATGTGGATGCAATTTT
CAATCAAGCTAGGCAACTTGGTGCTGTTGAAAGGCCTCTTGATCAGCTTC
AGGAGCCTCCAAGGTCAACTAGCTTTGCTGGAACTGGCAGGTTACTCTCG
GGGGAAACTACACAATCTACTAACCAGCAACCTGAGGCAGTTGTTCACAA
CATTATTTTCTGGAGTAATGGTTTCACTGTAAATGATGGACCTCTGAGGA
GATTGGACGATCCTGAAAATGCCTCATTTTTAgagAGCATAAAAAAATCT
GAGTGTCCCAAAGAACTTGAACCTGCAGATAGGAGGTCATCTGTTAATGT
TAACCTCATAAGGAGGAATGAGAACTGTCCCGAACCCGAAAAGCAGCATG
TTCCATTTCAGGGAGTGGGAAGAACTCTTGGAAGCAGCTCTTCATCAATG
ACTCCTGATCCAACTGTTGCCTCAACACCTCTCAATGCAGCGCCAACTCC
TTCTGCTGGCCTGGTAGTTGATCAATCATTGCCATCAACATCAATACAAC
TCAGGTTGGCTGATGGAACCCGCTTGATATCACATTTTAATAATCACCAC
ACTATCCGCGACATCCGTGCCTTCATTGATGCATCTAGACCTGGGGGCCG
ACAGGCTTATCAACTTCAGCTGATGGGTTTCCCCCCAAAGGTTCTAGCTG
ATGAAACTCAGACTATAGAGCAGGCAGGACTAGCAAATTCAGTTGTGATA
CAGAAATTCTAG
back to top