Cc_v2.0_19473.1

Transcript Overview


Name	Cc_v2.0_19473.1
Unique Name	drCajCajn.Asha.2.0.Cc_v2.0_19473.1
Type	mRNA
Organism	Cajanus cajan (pigeon pea)
Sequence length	792

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
CcLG08_v2.0	chromosome	CcLG08_v2.0:53453552..53454623 +	Cajanus cajan cv. Asha genome v2.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cajanus cajan cv. Asha genome v2.0	2024-06-26
InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0	2024-07-30
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL	2024-07-30
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot	2024-07-30
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11	2024-07-30

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
anccaL0050	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjccaL137	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anccaL0222	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjccaL291	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anccaL0413	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccaL0575	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccaL0849	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
carccaL066	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
ccapsR677	Pisum sativum Cameor genome v1a	Pisum sativum
ccapsR713	Pisum sativum Cameor genome v1a	Pisum sativum
ccapsR715	Pisum sativum Cameor genome v1a	Pisum sativum
carccaL616	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
ccavrvR613	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccavrvR656	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccavfhR659	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccapvR748	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccavfhR695	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccapvR782	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccavssR722	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccccaL0080	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccavssR778	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccccaL0659	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccavumR698	Vigna umbellata FF25 genome v1.0	Vigna umbellata
ccavuR568	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccavuR594	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccavumR753	Vigna umbellata FF25 genome v1.0	Vigna umbellata
ccavunR489	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
ccavunR516	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
ccapvfR777	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
ccapvfR801	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
Phvul.003G081900.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Vfaba.Hedin2.R1.4g242600.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
rna-XM_014652049.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
rna-XM_014662285.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Va01G100580.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vigun06g157300.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
evm.Ca_v2.0_00697	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
rna-TanjilR_27198	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Psat4g004280.1	Pisum sativum Cameor genome v1a	Pisum sativum
Vigun06g157300.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
Phvul.006G145400.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
jg20869.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vfaba.Hedin2.R1.1g448800.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
PvulFLAVERTChr06.1826	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
rna-TanjilR_09363	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
jg39081.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vigun03g443500.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
PvulFLAVERTChr03.1000501	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Vum_01G04144.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Va09G054930.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vigun03g443500.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
Vum_05G00722.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
rna-KK1_004574	Cajanus cajan Asha genome v1.0	Cajanus cajan
rna-KK1_017265	Cajanus cajan Asha genome v1.0	Cajanus cajan

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Cc_v2.0_19473	drCajCajn.Asha.2.0.Cc_v2.0_19473	Cajanus cajan	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cc_v2.0_19473.1.exon1	drCajCajn.Asha.2.0.Cc_v2.0_19473.1.exon1	Cajanus cajan	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cc_v2.0_19473.1.utr5p1	drCajCajn.Asha.2.0.Cc_v2.0_19473.1.utr5p1	Cajanus cajan	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds.Cc_v2.0_19473.1	drCajCajn.Asha.2.0.cds.Cc_v2.0_19473.1	Cajanus cajan	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cc_v2.0_19473.1.utr3p1	drCajCajn.Asha.2.0.Cc_v2.0_19473.1.utr3p1	Cajanus cajan	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drCajCajn.Asha.2.0.Cc_v2.0_19473.1	drCajCajn.Asha.2.0.Cc_v2.0_19473.1	Cajanus cajan	polypeptide
drCajCajn.Asha.2.0.Cc_v2.0_19473.1	drCajCajn.Asha.2.0.Cc_v2.0_19473.1-protein	Cajanus cajan	polypeptide

Homology

[Close]

BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151T6Q8|A0A151T6Q8_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_017265 PE=4 SV=1)

HSP 1 Score: 528.48 bits (1360), Expect = 0.000e+0
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0

Query:    1 MPLSPKGTNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLLKKPNLEPPIRQPSPSITEPPSSSSSSKRWKDIFKKSDKKNTQDKEKAKKKERKTGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPPQKPKPRRSKATAAGSTARVLNLNVPMCIGYKNHLSCRSDDNSAIGGSAAAANGGNIFNLRNLFAKKCVVTSH 263
            MPLSPKGTNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLLKKPNLEPPIRQPSPSITEPPSSSSSSKRWKDIFKKSDKKNTQDKEKAKKKERKTGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPPQKPKPRRSKATAAGSTARVLNLNVPMCIGYKNHLSCRSDDNSAIGGSAAAANGGNIFNLRNLFAKKCVVTSH
Sbjct:    1 MPLSPKGTNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLLKKPNLEPPIRQPSPSITEPPSSSSSSKRWKDIFKKSDKKNTQDKEKAKKKERKTGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPPQKPKPRRSKATAAGSTARVLNLNVPMCIGYKNHLSCRSDDNSAIGGSAAAANGGNIFNLRNLFAKKCVVTSH 263

[Close]

BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BNX2|V7BNX2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G145400g PE=4 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 2.822e-120
Identity = 211/311 (67.85%), Postives = 225/311 (72.35%), Query Frame = 0

Query:    3 LSPKGTNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLLKKPNLEPPIRQPS-------------------------PSITEPPSSSSSSKRWKDIFKKSDKKNTQD---KEKAKKKERKTGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPPQKPKPRRSKATAAGSTARVLNLNVPMCIGYKNHLSCRSDDNSAIGGSAAAA----------------------NGGNIFNLRNLFAKKCVVTSH 263
            LSP  TNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLL  PN   P  Q S                           +TEP SSSS+SKRW+DIF+K+DKKNT++   KEK KK+ERK+GTS TSAELNINIWPFSRSRSAGNA TRPK FAGAP TRKVNSAPCSRSNSAGESKSRKWPSSPGR GVHVGRSSPVWQ RR K SDP   PK RRSK +  G TARVLNLNVPMCIGY++HLSCRSD+NSA+G S   A                       GGNIFNLRNLF KKCVVTSH
Sbjct:    9 LSPNTTNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLL--PNKPHPSPQASTFTPPIHEPEPDPEPGSPPDPEPSPSILTEPTSSSSASKRWRDIFRKTDKKNTENIEEKEKGKKRERKSGTSATSAELNINIWPFSRSRSAGNAGTRPKFFAGAPLTRKVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRSSPVWQVRR-KTSDP---PKSRRSKVSGGGGTARVLNLNVPMCIGYRHHLSCRSDENSAVGVSGGGAITNGNSSNSNNNSNGGGNDGGGGGGNIFNLRNLFTKKCVVTSH 313

[Close]

BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9VE55|A0A0L9VE55_PHAAN (DUF4005 domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0069520 PE=4 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 5.179e-119
Identity = 204/311 (65.59%), Postives = 225/311 (72.35%), Query Frame = 0

Query:    3 LSPKGTNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLL--------KKPNLEPPIRQPSPS-------------ITEPPSSSSSSKRWKDIFKKSDKKNTQDKEKAKKKERK---TGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPPQKPKPRRSKATAAGSTARVLNLNVPMCIGYKNHLSCRSDDNSAIGGSAAAA--------------------------NGGNIFNLRNLFAKKCVVTSH 263
            LSP  TNCNSPEFEFWMLRNPSFPQP+LLSADELFVDGVLLPLHLL        K     PPI +P P              +TEP +SSS+SKRW+DIF+K+DKKNT++ E  +K +++   +GTS +SAELNINIWPFSRSRSAGNA TRPKLFAGAP TRKVNSAPCSRSNSAGESKSRKWPSSPGR GVHVGRSSPVWQ RR K SDP   PK RRSK T  G TARVLNLNVPMCIGY++HLSCRSD+NSA+G S                              +GGNIFNLRNLF KKCVVTSH
Sbjct:    8 LSPNATNCNSPEFEFWMLRNPSFPQPHLLSADELFVDGVLLPLHLLPNKPHPSPKASTFTPPIHEPDPEPGSPPDPEPSPSILTEPTTSSSTSKRWRDIFRKTDKKNTENTEDKEKGKKRERKSGTSASSAELNINIWPFSRSRSAGNAGTRPKLFAGAPLTRKVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRSSPVWQVRR-KTSDP---PKSRRSKVTGGGGTARVLNLNVPMCIGYRHHLSCRSDENSAVGVSGGGVLTSGNSSTTNNNNNTHNSNSGGNDGGSGGNIFNLRNLFTKKCVVTSH 314

[Close]

BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3S3U9|A0A0S3S3U9_PHAAN (DUF4005 domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G088400 PE=4 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 8.503e-119
Identity = 204/311 (65.59%), Postives = 225/311 (72.35%), Query Frame = 0

Query:    3 LSPKGTNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLL--------KKPNLEPPIRQPSPS-------------ITEPPSSSSSSKRWKDIFKKSDKKNTQDKEKAKKKERK---TGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPPQKPKPRRSKATAAGSTARVLNLNVPMCIGYKNHLSCRSDDNSAIGGSAAAA--------------------------NGGNIFNLRNLFAKKCVVTSH 263
            LSP  TNCNSPEFEFWMLRNPSFPQP+LLSADELFVDGVLLPLHLL        K     PPI +P P              +TEP +SSS+SKRW+DIF+K+DKKNT++ E  +K +++   +GTS +SAELNINIWPFSRSRSAGNA TRPKLFAGAP TRKVNSAPCSRSNSAGESKSRKWPSSPGR GVHVGRSSPVWQ RR K SDP   PK RRSK T  G TARVLNLNVPMCIGY++HLSCRSD+NSA+G S                              +GGNIFNLRNLF KKCVVTSH
Sbjct:   59 LSPNATNCNSPEFEFWMLRNPSFPQPHLLSADELFVDGVLLPLHLLPNKPHPSPKASTFTPPIHEPDPEPGSPPDPEPSPSILTEPTTSSSTSKRWRDIFRKTDKKNTENTEDKEKGKKRERKSGTSASSAELNINIWPFSRSRSAGNAGTRPKLFAGAPLTRKVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRSSPVWQVRR-KTSDP---PKSRRSKVTGGGGTARVLNLNVPMCIGYRHHLSCRSDENSAVGVSGGGVLTSGNSSTTNNNNNTHNSNSGGNDGGSGGNIFNLRNLFTKKCVVTSH 365

[Close]

BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VHE2|A0A1S3VHE2_VIGRR (Uncharacterized protein LOC106775202 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775202 PE=4 SV=2)

HSP 1 Score: 348.977 bits (894), Expect = 1.629e-116
Identity = 200/311 (64.31%), Postives = 222/311 (71.38%), Query Frame = 0

Query:    3 LSPKGTNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLL--------KKPNLEPPIRQPSPS-------------ITEPPSSSSSSKRWKDIFKKSDKKNTQDKEKAKKKERK---TGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPPQKPKPRRSKATAAGSTARVLNLNVPMCIGYKNHLSCRSDDN--------------------------SAIGGSAAAANGGNIFNLRNLFAKKCVVTSH 263
            LSP  TNCNSPEFEFWMLRNPSFPQP+LLSADELFVDGVLLPLHLL        K     PPI +P P              +TEP +SSS+SKRW+DIF+K+DKKNT++ E  +K +++   +GTS +SAELNINIWPFSRSRSAGNA TRPKLFAGAP TRKVNSAPCSRSNSAGESKSRKWPSSPGR GVHVGRSSPVWQ RR K SDP   PK RRSK T  G  ARVLNLNVPMCIGY++HLSCRSD+N                          ++  G     +GGNIFNLRNLF KKCVVTSH
Sbjct:   87 LSPNTTNCNSPEFEFWMLRNPSFPQPHLLSADELFVDGVLLPLHLLPNKPHPSPKASTFTPPIHEPDPEPGSPPDPEPSPSILTEPTTSSSASKRWRDIFRKTDKKNTENTEDKEKGKKRERKSGTSASSAELNINIWPFSRSRSAGNAGTRPKLFAGAPLTRKVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRSSPVWQVRR-KTSDP---PKSRRSKVTGGGGNARVLNLNVPMCIGYRHHLSCRSDENGTVGVSGGGVITSGNSSTTTNNNNTHNSNSGGNDGGSGGNIFNLRNLFTKKCVVTSH 393

[Close]

BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KKR9|A0A4D6KKR9_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g802 PE=4 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 4.116e-116
Identity = 197/310 (63.55%), Postives = 215/310 (69.35%), Query Frame = 0

Query:    3 LSPKGTNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLL--------KKPNLEPPIRQPSPSITEPPSSSSSS-------------KRWKDIFKKSDKKNTQDKEKAKKKERK---TGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPPQKPKPRRSKATAAGSTARVLNLNVPMCIGYKNHLSCRSDDNSAIG--GSAAAANGGN-----------------------IFNLRNLFAKKCVVTSH 263
            LSP  TNCNSPEFEFWMLRNPSFPQP+LLSADELFVDGVLLPLHLL        K     PPI +P P    PP    S              KRW+DIF+K+DKKNT++ E  +K +++   +GTS +SAELNINIWPFSRSRSAGNA TRPKLFAGAP TRKVNSAPCSRSNSAGESKSRKWPSSPGR GVHVGRSSPVWQ RR K SDP   PK RRSK    G T RVLNLNVPMCIGY++HLSCRSD+NSA+G  G     NG +                       IFNLRNLF KKCVVTSH
Sbjct:    8 LSPNATNCNSPEFEFWMLRNPSFPQPHLLSADELFVDGVLLPLHLLPNKPHPSPKASTFTPPIHEPDPEPGSPPDPEPSPSILTESTTSSSASKRWRDIFRKTDKKNTENAEDKEKGKKRERKSGTSASSAELNINIWPFSRSRSAGNAGTRPKLFAGAPLTRKVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRSSPVWQVRR-KTSDP---PKSRRSKVAVGGGTTRVLNLNVPMCIGYRHHLSCRSDENSAVGVSGGGVITNGNSSTSINNNTHNSNSGGNDGGSGGNIFNLRNLFTKKCVVTSH 313

[Close]

BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GS12|A0A445GS12_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_040591 PE=4 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 1.972e-115
Identity = 192/287 (66.90%), Postives = 214/287 (74.56%), Query Frame = 0

Query:   10 CNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLL-------KKPNLEPPIRQPSPSITEPPSSSSSS----KRWKDIFKKSDKKNTQDKEKAKKKERK-----TGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPPQKPKPRRSKATAAGSTARVLNLNVPMCIGYKNHLSCRSDDNSAIG-----------------GSAAAANGGNIFNLRNLFAKKCVVTSH 263
            CNSPEFEFWML+NPSFPQPNLLSADELFVDG LLPLHLL       +  N   PI +P PS +   S+S+++    KRWKDIFKKSDKKN +     +K++ K     + +  +SAELNINIWPFSRSRSAGNA TRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGR GVHVGRSSPVWQ RR  +++PPQKPK RRSK TA G TARVLNLNVPMCIGY++HLSCRSD+NSA                   G     +GGNIFNLRNLF KKC VTSH
Sbjct:   73 CNSPEFEFWMLQNPSFPQPNLLSADELFVDGFLLPLHLLPNKPHPPQASNFITPIHEPEPSPSITESTSTTTFSSSKRWKDIFKKSDKKNAETNNNEEKEKAKKKERKSASGASSAELNINIWPFSRSRSAGNAGTRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRSSPVWQVRRKNSNEPPQKPKARRSKVTAGGGTARVLNLNVPMCIGYRHHLSCRSDENSAAAVTNGNSNNNSTTNNNNSGGNDGGSGGNIFNLRNLFTKKCAVTSH 359

[Close]

BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
Match: tr|K7MAT8|K7MAT8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G112200 PE=4 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 1.972e-115
Identity = 192/287 (66.90%), Postives = 214/287 (74.56%), Query Frame = 0

Query:   10 CNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLL-------KKPNLEPPIRQPSPSITEPPSSSSSS----KRWKDIFKKSDKKNTQDKEKAKKKERK-----TGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPPQKPKPRRSKATAAGSTARVLNLNVPMCIGYKNHLSCRSDDNSAIG-----------------GSAAAANGGNIFNLRNLFAKKCVVTSH 263
            CNSPEFEFWML+NPSFPQPNLLSADELFVDG LLPLHLL       +  N   PI +P PS +   S+S+++    KRWKDIFKKSDKKN +     +K++ K     + +  +SAELNINIWPFSRSRSAGNA TRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGR GVHVGRSSPVWQ RR  +++PPQKPK RRSK TA G TARVLNLNVPMCIGY++HLSCRSD+NSA                   G     +GGNIFNLRNLF KKC VTSH
Sbjct:   73 CNSPEFEFWMLQNPSFPQPNLLSADELFVDGFLLPLHLLPNKPHPPQASNFITPIHEPEPSPSITESTSTTTFSSSKRWKDIFKKSDKKNAETNNNEEKEKAKKKERKSASGASSAELNINIWPFSRSRSAGNAGTRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRSSPVWQVRRKNSNEPPQKPKARRSKVTAGGGTARVLNLNVPMCIGYRHHLSCRSDENSAAAVTNGNSNNNSTTNNNNSGGNDGGSGGNIFNLRNLFTKKCAVTSH 359

[Close]

BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VK51|A0AA86VK51_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS19321 PE=4 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 3.251e-112
Identity = 203/312 (65.06%), Postives = 221/312 (70.83%), Query Frame = 0

Query:    3 LSPKGTNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLL--------KKPNLEPPIRQPSPSI-------------TEPPSSSSSS---KRWKDIFKKSDKKNTQDKEKAKKKERK---TGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPPQKPKPRRSKATAAGSTARVLNLNVPMCIGYKNHLSCRSDDNSAIG------------------------GSAAAANGGNIFNLRNLFAKKCVVTSH 263
            LSP  TNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLL        K     PPI +  P +             TEP SSSSSS   KRW+DIF+KSDKKN+++ E+ +K +++   +GT+ TSAELNINIWPFSRSRSAGNA TRPKLFAG P TRKVNSAPCSRSNSAGESKSRKWPSSPGR GVHVGRSSPVWQ RR KN DP   PK RRSK    G TARVLNLNVPMCIGY+ +LSCRSD+NSA+G                        G      GGNIFNLRNLF KKCVVTSH
Sbjct:    8 LSPNRTNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLLPNKPQPSPKASTFTPPIHEHDPELASPPDPEPSPSILTEPTSSSSSSSTSKRWRDIFRKSDKKNSENNEEKEKGKKRERKSGTATTSAELNINIWPFSRSRSAGNAGTRPKLFAGTPVTRKVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRSSPVWQVRR-KNPDP---PKSRRSKVAGGGGTARVLNLNVPMCIGYRPNLSCRSDENSAVGVSGGGGTNGNSNNNNNNNNTHNSNGGNDGGGGGNIFNLRNLFTKKCVVTSH 315

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BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86V8E9|A0AA86V8E9_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS10250 PE=4 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 5.063e-107
Identity = 185/283 (65.37%), Postives = 207/283 (73.14%), Query Frame = 0

Query:   10 CNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLLKKPNLEPPIR----QPSPSITEPPSSSSSSKRWKDIFKKSDKKNTQDKEKAKKKERKTGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPP-----QKPKPRRSKATAAGSTAR--VLNLNVPMCIGYKNHLSCRSDDNSAIGGSAAAAN------------------GGNIFNLRNLFAKKCVVTSH 263
            C SPEFEFWM+RNPSFPQPN+LSADELFV+GVLLPLHLL KP           +PSP+IT+  S+++SSKRWKDIFK   KKN +    AKKKE+K+G +P SAELNINIWPFSRSRSAGNA TRPKLF  AP TRK NSAPCSRSNSAGESKSRKWPSSPGR GVHVGRSSPVWQ RRGKN +PP      KPK RRSK      T+   VLNLNVPMCIGY++HL+CRSD+NSAI  S A+ N                  GG +F LR+LF KK VV SH
Sbjct:   19 CASPEFEFWMVRNPSFPQPNILSADELFVNGVLLPLHLLNKPQPPQQPPDPELEPSPAITDSSSAATSSKRWKDIFK---KKNAESNNDAKKKEKKSGVAP-SAELNINIWPFSRSRSAGNAGTRPKLF--APSTRKSNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRSSPVWQVRRGKNPEPPPLNHDNKPKSRRSKLGGGLGTSNTMVLNLNVPMCIGYRHHLTCRSDENSAIRVSDASDNIPRSDSNSGNSNPVHANAGGKLFTLRSLFTKKSVVASH 295

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BLAST of Cc_v2.0_19473.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:11742102-11743265 REVERSE LENGTH=387)

HSP 1 Score: 229.95 bits (585), Expect = 1.531e-73
Identity = 154/322 (47.83%), Postives = 187/322 (58.07%), Query Frame = 0

Query:    3 LSPKGT-----NCNS--PEFEFWMLRNPSFPQPN--LLSADELFVDGVLLPLHLLK-------KPNLEPPIRQPSPS----ITEPPSS------------SSSSKRWKDIFKKSDKK--------NTQDKEKAKKKERKTGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSRSNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNS-------DPP-------QKPKPRRSKATAAGSTARVLNLNVPMCIGYKNHLSCRSDDNSAIGGSAAAAN-------------GGNIFNLRNLFAKK 257
            LSP G+     +C+S  PEFEFW L N SFPQ +  LLSADELF DGVLLPL LL         PN+      PSPS    ITE  S             ++ SKRW+DIF+KS+ K            KEK K     +  S + AELNINIWPFSRSRSAGN  TRP++  GAP TRKV+SAPCSRSNS GESKSRKWPSSP R GVH+GR+SPVWQ RRG  +       +P        + P+ R+ K     + A+VLNLNVPMCIGY++ LSCR++++S  G S   ++                +F  RNLF KK
Sbjct:   64 LSPCGSQRRRSSCDSNPPEFEFWRLTNSSFPQADSDLLSADELFHDGVLLPLDLLSVKSELQSDPNIAECDPDPSPSTGSLITEQKSDLEPGLGSELTRETTVSKRWRDIFRKSETKPPGKKEKVKENKKEKKKTGSGPSSGSGSGAELNINIWPFSRSRSAGNNVTRPRMSFGAPTTRKVSSAPCSRSNSTGESKSRKWPSSPSRNGVHLGRNSPVWQVRRGGGAPVGKTIPEPMGRVVGKREIPETRKGKTVIESNKAKVLNLNVPMCIGYRSRLSCRTEESSGGGNSNIGSDNNNNNNANANNPNPNGLFGFRNLFIKK 385

The following BLAST results are available for this feature:

BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
BLAST of Cc_v2.0_19473.1 vs. Araport11

BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
tr\|A0A151T6Q8\|A0A151T6Q8_CAJCA	0.000e+0	100.00	Uncharacterized protein OS=Cajanus cajan OX=3821 G...	[more]
tr\|V7BNX2\|V7BNX2_PHAVU	2.822e-120	67.85	Uncharacterized protein OS=Phaseolus vulgaris OX=3...	[more]
tr\|A0A0L9VE55\|A0A0L9VE55_PHAAN	5.179e-119	65.59	DUF4005 domain-containing protein OS=Phaseolus ang...	[more]
tr\|A0A0S3S3U9\|A0A0S3S3U9_PHAAN	8.503e-119	65.59	DUF4005 domain-containing protein OS=Vigna angular...	[more]
tr\|A0A1S3VHE2\|A0A1S3VHE2_VIGRR	1.629e-116	64.31	Uncharacterized protein LOC106775202 OS=Vigna radi...	[more]
tr\|A0A4D6KKR9\|A0A4D6KKR9_VIGUN	4.116e-116	63.55	Uncharacterized protein OS=Vigna unguiculata OX=39...	[more]
tr\|A0A445GS12\|A0A445GS12_GLYSO	1.972e-115	66.90	Uncharacterized protein OS=Glycine soja OX=3848 GN...	[more]
tr\|K7MAT8\|K7MAT8_SOYBN	1.972e-115	66.90	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]
tr\|A0AA86VK51\|A0AA86VK51_9FABA	3.251e-112	65.06	Uncharacterized protein OS=Sphenostylis stenocarpa...	[more]
tr\|A0AA86V8E9\|A0AA86V8E9_9FABA	5.063e-107	65.37	Uncharacterized protein OS=Sphenostylis stenocarpa...	[more]

BLAST of Cc_v2.0_19473.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

BLAST of Cc_v2.0_19473.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
\|	1.531e-73	47.83	Symbols: no symbol available \| no full name availa...	[more]

InterPro

Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35132	SERINE/ARGININE REPETITIVE MATRIX-LIKE PROTEIN	coord: 8..258

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at CcLG08_v2.0:53453552..53454623+
coding sequence from alignment at CcLG08_v2.0:53453552..53454623+

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_19473.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19473.1; Name=Cc_v2.0_19473.1; organism=Cajanus cajan; type=mRNA; length=792bp
ATGCCACTCTCTCCCAAAGGAACTAATTGCAACTCACCAGAATTCGAGTT
CTGGATGCTCCGAAACCCCTCTTTCCCACAGCCTAATCTTCTCTCCGCCG
ACGAACTCTTCGTCGACGGCGTACTGCTTCCTCTCCACCTTCTCAAAAAA
CCCAACCTAGAACCTCCGATCCGCCAACCCTCTCCATCCATAACCGAACc
cccctcctcctcctcctcctccAAGCGCTGGAAAGATATATTCAAAAaaa
gtgataagaaaaacacgcaagacaaagagaaagcaaaaaagaaagagaGA
AAAACCGGAACTTCACCCACTTCCGCGGAATTGAACATCAATATATGGCC
TTTTTCGCGGAGCAGGTCTGCCGGAAACGCGGCAACCCGACCCAAATTAT
TCGCCGGAGCTCCGCCCACCCGGAAGGTCAACAGCGCGCCCTGCTCCCGG
AGCAACTCCGCCGGCGAGTCCAAGTCCAGGAAGTGGCCCAGCAGTCCGGG
CCGCCCCGGCGTCCACGTGGGCCGGAGCAGCCCAGTCTGGCAGGCCCGCC
GCGGAAAAAACTCCGATCCTCCCCAGAAGCCCAAACCTCGCCGGAGCAAA
GCCACCGCCGCGGGTTCCACCGCCAGGGTTTTGAATCTGAACGTTCCCAT
GTGCATTGGCTACAAAAACCACCTAAGCTGCCGAAGCGACGATAACAGCG
CCATTGGTGGGAGCGCCGCCGCCGCCAATGGGGGTAATATTTTTAACCTG
CGCAACCTCTTCGCTAAAAAATGCGTAGTAACTTCTCACTAG

protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_19473.1

>drCajCajn.Asha.2.0.Cc_v2.0_19473.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19473.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_19473.1; organism=Cajanus cajan; type=polypeptide; length=263bp
MPLSPKGTNCNSPEFEFWMLRNPSFPQPNLLSADELFVDGVLLPLHLLKK
PNLEPPIRQPSPSITEPPSSSSSSKRWKDIFKKSDKKNTQDKEKAKKKER
KTGTSPTSAELNINIWPFSRSRSAGNAATRPKLFAGAPPTRKVNSAPCSR
SNSAGESKSRKWPSSPGRPGVHVGRSSPVWQARRGKNSDPPQKPKPRRSK
ATAAGSTARVLNLNVPMCIGYKNHLSCRSDDNSAIGGSAAAANGGNIFNL
RNLFAKKCVVTSH

mRNA from alignment at CcLG08_v2.0:53453552..53454623+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>drCajCajn.Asha.2.0.Cc_v2.0_19473.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19473.1; Name=Cc_v2.0_19473.1; organism=Cajanus cajan; type=mRNA; length=1072bp; location=Sequence derived from: CcLG08_v2.0:53453552..53454623+ (Cajanus cajan
GAAATAATGTTTAGTATGGCACATGGTGATGGACCCAACCCCCTCCCTTA
AAATCTATGCTATCTCTTTCCCTTCCCCTGATTCATTCCTCTTTCTCTCT
TAAATGTAGGGTCTTTTTCTCCCCACGCTCTCTCATCCAACAAACAAAGA
AGTGAAGAACCTTCTCCTACTCTTTCTCTCACCCCTCACCCCTCACCCCT
CACCCACCGCTACAAAACGCAAACCCTTATCCTCCCCAATTCTCACATCA
TGCCACTCTCTCCCAAAGGAACTAATTGCAACTCACCAGAATTCGAGTTC
TGGATGCTCCGAAACCCCTCTTTCCCACAGCCTAATCTTCTCTCCGCCGA
CGAACTCTTCGTCGACGGCGTACTGCTTCCTCTCCACCTTCTCAAAAAAC
CCAACCTAGAACCTCCGATCCGCCAACCCTCTCCATCCATAACCGAACcc
ccctcctcctcctcctcctccAAGCGCTGGAAAGATATATTCAAAAaaag
tgataagaaaaacacgcaagacaaagagaaagcaaaaaagaaagagaGAA
AAACCGGAACTTCACCCACTTCCGCGGAATTGAACATCAATATATGGCCT
TTTTCGCGGAGCAGGTCTGCCGGAAACGCGGCAACCCGACCCAAATTATT
CGCCGGAGCTCCGCCCACCCGGAAGGTCAACAGCGCGCCCTGCTCCCGGA
GCAACTCCGCCGGCGAGTCCAAGTCCAGGAAGTGGCCCAGCAGTCCGGGC
CGCCCCGGCGTCCACGTGGGCCGGAGCAGCCCAGTCTGGCAGGCCCGCCG
CGGAAAAAACTCCGATCCTCCCCAGAAGCCCAAACCTCGCCGGAGCAAAG
CCACCGCCGCGGGTTCCACCGCCAGGGTTTTGAATCTGAACGTTCCCATG
TGCATTGGCTACAAAAACCACCTAAGCTGCCGAAGCGACGATAACAGCGC
CATTGGTGGGAGCGCCGCCGCCGCCAATGGGGGTAATATTTTTAACCTGC
GCAACCTCTTCGCTAAAAAATGCGTAGTAACTTCTCACTAGTGTTACttt
ttttttcttttttttttttttt

Coding sequence (CDS) from alignment at CcLG08_v2.0:53453552..53454623+

>drCajCajn.Asha.2.0.Cc_v2.0_19473.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19473.1; Name=Cc_v2.0_19473.1; organism=Cajanus cajan; type=CDS; length=792bp; location=Sequence derived from: CcLG08_v2.0:53453552..53454623+ (Cajanus cajan
ATGCCACTCTCTCCCAAAGGAACTAATTGCAACTCACCAGAATTCGAGTT
CTGGATGCTCCGAAACCCCTCTTTCCCACAGCCTAATCTTCTCTCCGCCG
ACGAACTCTTCGTCGACGGCGTACTGCTTCCTCTCCACCTTCTCAAAAAA
CCCAACCTAGAACCTCCGATCCGCCAACCCTCTCCATCCATAACCGAACc
cccctcctcctcctcctcctccAAGCGCTGGAAAGATATATTCAAAAaaa
gtgataagaaaaacacgcaagacaaagagaaagcaaaaaagaaagagaGA
AAAACCGGAACTTCACCCACTTCCGCGGAATTGAACATCAATATATGGCC
TTTTTCGCGGAGCAGGTCTGCCGGAAACGCGGCAACCCGACCCAAATTAT
TCGCCGGAGCTCCGCCCACCCGGAAGGTCAACAGCGCGCCCTGCTCCCGG
AGCAACTCCGCCGGCGAGTCCAAGTCCAGGAAGTGGCCCAGCAGTCCGGG
CCGCCCCGGCGTCCACGTGGGCCGGAGCAGCCCAGTCTGGCAGGCCCGCC
GCGGAAAAAACTCCGATCCTCCCCAGAAGCCCAAACCTCGCCGGAGCAAA
GCCACCGCCGCGGGTTCCACCGCCAGGGTTTTGAATCTGAACGTTCCCAT
GTGCATTGGCTACAAAAACCACCTAAGCTGCCGAAGCGACGATAACAGCG
CCATTGGTGGGAGCGCCGCCGCCGCCAATGGGGGTAATATTTTTAACCTG
CGCAACCTCTTCGCTAAAAAATGCGTAGTAACTTCTCACTAG

Search form

Cc_v2.0_19473.1