Cc_v2.0_19428.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cc_v2.0_19428.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151T6L0|A0A151T6L0_CAJCA (FAS1 domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_017202 PE=3 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 2.786e-114 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 Query: 1 MALPSLFILLFLLGFAESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGTSQPTRDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYDN 159 MALPSLFILLFLLGFAESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGTSQPTRDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYDN Sbjct: 1 MALPSLFILLFLLGFAESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGTSQPTRDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYDN 159
BLAST of Cc_v2.0_19428.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VGM8|A0AA86VGM8_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS19368 PE=4 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 7.442e-95 Identity = 136/150 (90.67%), Postives = 143/150 (95.33%), Query Frame = 0 Query: 11 FLLGFAESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGT-SQPTRDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYDN 159 FLLGFAE+Q FTHPFN TDLQAAIGDMRAKSYYGFAMLLQMLNGT SQP RDLTFLMPDDKELS+SSIS+ EV EFLLKHAIPMPLYFNDLSHFPTG LVPSGNSSKMIRIHNRG+GDFFVNNA+IVSANVCLNS+IKCHGVDAII+YDN Sbjct: 82 FLLGFAEAQPFTHPFNHTDLQAAIGDMRAKSYYGFAMLLQMLNGTTSQPNRDLTFLMPDDKELSSSSISVDEVGEFLLKHAIPMPLYFNDLSHFPTGILVPSGNSSKMIRIHNRGKGDFFVNNAKIVSANVCLNSVIKCHGVDAIIDYDN 231
BLAST of Cc_v2.0_19428.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BNR7|V7BNR7_PHAVU (FAS1 domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G141400g PE=3 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 4.498e-92 Identity = 132/155 (85.16%), Postives = 144/155 (92.90%), Query Frame = 0 Query: 6 LFILLFLLGFAESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGTS-QPTRDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYDN 159 LFI+LFLLGFAESQ FTHP N TDLQ AIGDMRAKSYYGFAMLLQMLNGT+ QP RD TFLMPDDK+LS+SSI + EV EFLLKHAIPMPL+FNDLSHFPTGTLVPSGNSS+MIRI+NRG+ DFFVNNA+IVSANVCLNS+IKCHGVDAII+YDN Sbjct: 8 LFIILFLLGFAESQPFTHPINHTDLQVAIGDMRAKSYYGFAMLLQMLNGTTAQPIRDFTFLMPDDKQLSSSSIFVDEVGEFLLKHAIPMPLHFNDLSHFPTGTLVPSGNSSRMIRIYNRGKRDFFVNNAKIVSANVCLNSVIKCHGVDAIIDYDN 162
BLAST of Cc_v2.0_19428.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445IVA9|A0A445IVA9_GLYSO (FAS1 domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_022852 PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 9.957e-92 Identity = 130/145 (89.66%), Postives = 139/145 (95.86%), Query Frame = 0 Query: 16 AESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGTSQPT-RDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYDN 159 ++SQ+F HPFNRTD+QAAIGDMRAKSYYGFAMLLQMLNGTSQP RDLTFLMPDDKELSASSISI EVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGN ++MIRIHNR RGDFFVNNAQIVSANVCL+S+IKCHGVDAIIEYD+ Sbjct: 20 SQSQTFNHPFNRTDIQAAIGDMRAKSYYGFAMLLQMLNGTSQPNNRDLTFLMPDDKELSASSISIDEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNRTQMIRIHNRARGDFFVNNAQIVSANVCLSSVIKCHGVDAIIEYDH 164
BLAST of Cc_v2.0_19428.1 vs. ExPASy TrEMBL (2024)
Match: tr|K7LB82|K7LB82_SOYBN (FAS1 domain-containing protein OS=Glycine max OX=3847 GN=102660981 PE=3 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 9.957e-92 Identity = 130/145 (89.66%), Postives = 139/145 (95.86%), Query Frame = 0 Query: 16 AESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGTSQPT-RDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYDN 159 ++SQ+F HPFNRTD+QAAIGDMRAKSYYGFAMLLQMLNGTSQP RDLTFLMPDDKELSASSISI EVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGN ++MIRIHNR RGDFFVNNAQIVSANVCL+S+IKCHGVDAIIEYD+ Sbjct: 20 SQSQTFNHPFNRTDIQAAIGDMRAKSYYGFAMLLQMLNGTSQPNNRDLTFLMPDDKELSASSISIDEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNRTQMIRIHNRARGDFFVNNAQIVSANVCLSSVIKCHGVDAIIEYDH 164
BLAST of Cc_v2.0_19428.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D5BNI5|A0A9D5BNI5_PEA (FAS1 domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_014775 PE=3 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 8.468e-90 Identity = 126/158 (79.75%), Postives = 142/158 (89.87%), Query Frame = 0 Query: 1 MALPSLFILLFLLGFAESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGTSQPTRDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYD 158 M L LF++LFL GFA+SQ HPFN TDLQAAIGDMRA+S+YGFAMLLQMLNGTSQP+R+LT+LMP D+ELSAS++S E+E+FLL HAI MPLYFNDLSHFPTGTLVPSG S+MIRIHNRGRGD+FVNNAQIVS NVCLNS+IKCHGVDAIIEYD Sbjct: 1 MGLQHLFMILFLFGFAKSQPTIHPFNHTDLQAAIGDMRARSFYGFAMLLQMLNGTSQPSRELTYLMPGDRELSASAMSADEIEDFLLSHAILMPLYFNDLSHFPTGTLVPSGMDSRMIRIHNRGRGDYFVNNAQIVSVNVCLNSVIKCHGVDAIIEYD 158
BLAST of Cc_v2.0_19428.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XE48|A0A1S2XE48_CICAR (Uncharacterized protein LOC101500574 OS=Cicer arietinum OX=3827 GN=LOC101500574 PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 4.537e-88 Identity = 124/142 (87.32%), Postives = 133/142 (93.66%), Query Frame = 0 Query: 17 ESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGTSQPTRDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYD 158 ESQS HPFN TDLQAAIGDMRAKS+YGFAMLLQMLNGTSQPTRD TFLMPDD+ELSAS+IS ++EEFLL HAIPMPLYF DLSHFPTGTLVPSG SS+MIRIHNRGRGDFFVNNAQIVSAN+CL+S+IKCHGVDAIIEYD Sbjct: 17 ESQSTIHPFNHTDLQAAIGDMRAKSFYGFAMLLQMLNGTSQPTRDFTFLMPDDRELSASAISADQIEEFLLSHAIPMPLYFYDLSHFPTGTLVPSGISSRMIRIHNRGRGDFFVNNAQIVSANICLSSVIKCHGVDAIIEYD 158
BLAST of Cc_v2.0_19428.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KNN5|A0A4D6KNN5_VIGUN (FAS1 domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g849 PE=3 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 9.323e-88 Identity = 133/162 (82.10%), Postives = 143/162 (88.27%), Query Frame = 0 Query: 1 MALPS--LFILLFLLGFAESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNG-TSQPTRDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYDN 159 MAL S FI+LFLLGFAESQ FTHPFN TDLQAAI DMRAKSYYGFAMLLQML G T+QP D TFLMPDDK+LS SSIS EV EFLLKHAIPMPLYF+DLSHFPTGTLVPSGN+S+MIRIHNRG+GDFF+NNA+IVSANVCL S IKCHGVDAII+Y N Sbjct: 60 MALLSSCFFIILFLLGFAESQPFTHPFNHTDLQAAIRDMRAKSYYGFAMLLQMLTGKTAQPNGDFTFLMPDDKKLSFSSISADEVGEFLLKHAIPMPLYFSDLSHFPTGTLVPSGNTSQMIRIHNRGKGDFFLNNAKIVSANVCLKSAIKCHGVDAIIDYYN 221
BLAST of Cc_v2.0_19428.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P4CY78|A0A6P4CY78_ARADU (Uncharacterized protein LOC107482822 OS=Arachis duranensis OX=130453 GN=LOC107482822 PE=3 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.395e-87 Identity = 122/151 (80.79%), Postives = 135/151 (89.40%), Query Frame = 0 Query: 8 ILLFLLGFAESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGTSQPTRDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYD 158 +L+ + G+AESQ HPFN TDLQAAI DMR KSYYGFAMLLQMLNGTSQP+ LTFLMPDD+ELS S+I+ E+E+FLL HAIPMPLYFNDLSHFPTGTLVPSG S+KMIRIHNRGRGDFFVNNAQIVSANVCL S+IKCHG+DAIIEYD Sbjct: 1 MLVLVTGYAESQPIFHPFNHTDLQAAISDMRTKSYYGFAMLLQMLNGTSQPSSSLTFLMPDDRELSTSAIAADEIEDFLLSHAIPMPLYFNDLSHFPTGTLVPSGISTKMIRIHNRGRGDFFVNNAQIVSANVCLGSVIKCHGIDAIIEYD 151
BLAST of Cc_v2.0_19428.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3S403|A0A0S3S403_PHAAN (FAS1 domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G092900 PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.037e-86 Identity = 128/162 (79.01%), Postives = 144/162 (88.89%), Query Frame = 0 Query: 1 MALPS--LFILLFLLGFAESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGTS-QPTRDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYDN 159 MAL S FI+LFLLGFAESQ THPFN TDLQ+AI DMRAKSYYGFAMLLQML GT+ QP + TFLMPDDK+LS+SSIS +V +FLLKHAIPMPLYF+DLSHFPTGTL+PSGN+SKMIRIHNRG+GDFF+NNA+IVSANVCL S+IKCHGVDAII+Y N Sbjct: 1 MALISSCFFIILFLLGFAESQPLTHPFNHTDLQSAIRDMRAKSYYGFAMLLQMLTGTTAQPNGEFTFLMPDDKQLSSSSISADQVGDFLLKHAIPMPLYFSDLSHFPTGTLIPSGNTSKMIRIHNRGKGDFFLNNAKIVSANVCLKSVIKCHGVDAIIDYYN 162
BLAST of Cc_v2.0_19428.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:9300422-9301990 FORWARD LENGTH=268) HSP 1 Score: 127.102 bits (318), Expect = 1.820e-36 Identity = 67/165 (40.61%), Postives = 96/165 (58.18%), Query Frame = 0 Query: 5 SLFILLFLLGFAESQSFTH----------PFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGTSQ-PTRDLTFLMPDDKELSASSISIYEVEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIEYD 158 +F +L ++G A + F +N+TDL +A+ DMR +SY GF +LL+ LN T+ D+TFLMP D ++S + I+ +E F+LKH IP L N + HFP TLVP S +M I G +VNNA+IV+ NVC NS I CHG+ +I ++ Sbjct: 83 KVFYMLCVIGLASKRGFNDLPPHLILRHDNYNQTDLISAMTDMRRQSYNGFVILLRFLNDTNYFRNTDITFLMPSDNDISHADITPESLETFILKHTIPAWLMINHMLHFPNRTLVPCSFSDRMFTITKSGGSGIYVNNARIVTPNVCQNSRISCHGISDVISFN 247
BLAST of Cc_v2.0_19428.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:5567084-5567854 FORWARD LENGTH=256) HSP 1 Score: 108.612 bits (270), Expect = 1.930e-29 Identity = 58/153 (37.91%), Postives = 88/153 (57.52%), Query Frame = 0 Query: 7 FILLFLLGFAESQSFTHPFNRTDLQAAIGDMRAKSYYGFAMLLQMLNGTSQP-TRDLTFLMPDDKELSASSISIYE--VEEFLLKHAIPMPLYFNDLSHFPTGTLVPSGNSSKMIRIHNRGRGDFFVNNAQIVSANVCLNSMIKCHGVDAIIE 156 +++ + +Q H N +L AI +M +Y+ F ML+ ML + ++TFLMP DK LS S+I + V EFLL+H+IP L F L+ P G++VPS + I N GR ++F+NN +I+S N+C IKCHG+D I++ Sbjct: 13 MLVIIVTSSTRAQKSPHVPNNHELSIAIEEMEKANYFSFVMLINMLPSVNPRFLANVTFLMPKDKTLSTSNIINQQDSVTEFLLRHSIPSSLLFEHLNLIPNGSIVPSSLPHYTLEISNGGRSNYFLNNVKIISRNICSLGSIKCHGIDGILQ 165 The following BLAST results are available for this feature:
BLAST of Cc_v2.0_19428.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Cc_v2.0_19428.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot ) Total hits: 0
BLAST of Cc_v2.0_19428.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11) Total hits: 2
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCajCajn.Asha.2.0.Cc_v2.0_19428.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19428.1; Name=Cc_v2.0_19428.1; organism=Cajanus cajan; type=mRNA; length=480bpback to top protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_19428.1 >drCajCajn.Asha.2.0.Cc_v2.0_19428.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19428.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_19428.1; organism=Cajanus cajan; type=polypeptide; length=159bpback to top mRNA from alignment at CcLG08_v2.0:52855999..52856816+ Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drCajCajn.Asha.2.0.Cc_v2.0_19428.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19428.1; Name=Cc_v2.0_19428.1; organism=Cajanus cajan; type=mRNA; length=818bp; location=Sequence derived from: CcLG08_v2.0:52855999..52856816+ (Cajanus cajanback to top Coding sequence (CDS) from alignment at CcLG08_v2.0:52855999..52856816+ >drCajCajn.Asha.2.0.Cc_v2.0_19428.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19428.1; Name=Cc_v2.0_19428.1; organism=Cajanus cajan; type=CDS; length=480bp; location=Sequence derived from: CcLG08_v2.0:52855999..52856816+ (Cajanus cajanback to top |