Cc_v2.0_19422.1

Transcript Overview
NameCc_v2.0_19422.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_19422.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length462
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG08_v2.0chromosomeCcLG08_v2.0:52767792..52769017 -Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjccaL137Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccaL143Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0222Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL291Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0413Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0575Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0850Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL066Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL418Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR677Pisum sativum Cameor genome v1aPisum sativum
ccapsR713Pisum sativum Cameor genome v1aPisum sativum
carccaL616Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavrvR613Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR656Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR659Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavfhR695Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR782Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR722Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0080Cajanus cajan Asha genome v1.0Cajanus cajan
ccavssR749Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0128Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR698Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR568Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR747Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR594Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR753Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavunR489Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR516Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigun03g439400.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
evm.Ca_v2.0_00743Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Va01G100050.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.1g445000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun06g152400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vum_05G00769.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Phvul.006G140600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun06g152400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat1g173400.1Pisum sativum Cameor genome v1aPisum sativum
Va09G054170.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg39182.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_022783011.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_014661907.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_27164Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun03g439400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_017192Cajanus cajan Asha genome v1.0Cajanus cajan
rna-KK1_026059Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_19422drCajCajn.Asha.2.0.Cc_v2.0_19422Cajanus cajangene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_19422.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19422.1Cajanus cajanCDS
cds.Cc_v2.0_19422.1drCajCajn.Asha.2.0.cds.Cc_v2.0_19422.1_2Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_19422.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_19422.1.exon2Cajanus cajanexon
Cc_v2.0_19422.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_19422.1.exon1Cajanus cajanexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_19422.1drCajCajn.Asha.2.0.Cc_v2.0_19422.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_19422.1drCajCajn.Asha.2.0.Cc_v2.0_19422.1-proteinCajanus cajanpolypeptide


Homology
BLAST of Cc_v2.0_19422.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151T6K2|A0A151T6K2_CAJCA (DUF4408 domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_017192 PE=4 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 1.222e-100
Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 0
Query:    1 MAKKAKTSLMKNSSDSDDFDDQFQPSNILSETNSRVSDMVVVPLVESFESPENVPLIEEYNEEDSEGDEDQEEGTLCSKTEGSESEGYVSQEMKEGELESEVEEAEYDEHGETTMTTNEELVNTEELNRKFEEFIRKMKEEIRIEAQRQLIAV 153
            +A  AKTSLMKNSSDSDDFDDQFQPSNILSETNSRVSDMVVVPLVESFESPENVPLIEEYNEEDSEGDEDQEEGTLCSKTEGSESEGYVSQEMKEGELESEVEEAEYDEHGETTMTTNEELVNTEELNRKFEEFIRKMKEEIRIEAQRQLIAV
Sbjct:   19 LAFVAKTSLMKNSSDSDDFDDQFQPSNILSETNSRVSDMVVVPLVESFESPENVPLIEEYNEEDSEGDEDQEEGTLCSKTEGSESEGYVSQEMKEGELESEVEEAEYDEHGETTMTTNEELVNTEELNRKFEEFIRKMKEEIRIEAQRQLIAV 171          
BLAST of Cc_v2.0_19422.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86T4A5|A0AA86T4A5_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS19375 PE=4 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.523e-44
Identity = 106/162 (65.43%), Postives = 122/162 (75.31%), Query Frame = 0
Query:    1 MAKKAKTSLMKNSSDSDDFDDQFQPSNILSETNSRVSDMVVVPLVESFESPENVPLI-------EEYNEEDSEGDEDQEEGTLCSKTEGSESEGYV-SQEMKEGELESEVEEAEYDEHGETTMTTN-EELVNTEELNRKFEEFIRKMKEEIRIEAQRQLIAV 153
            +A  AKT LM NSSDSD   DQ  PSN+     + VSDMVV PL+ESF SPEN+ L+       EEYNEE SE DEDQE+  LC+KTEG ESEGY+  +E+ EGE ESEVE A+ D+  ETT TTN EEL+NT+ELNRKFEEFIRKM+EEIRIEAQRQLIAV
Sbjct:   79 LAFVAKTLLM-NSSDSDF--DQLLPSNLSETKTTTVSDMVVAPLMESFASPENILLVVDEQKGQEEYNEEVSE-DEDQEQEILCAKTEGRESEGYIREEEITEGESESEVEVAQDDDLAETTSTTNNEELLNTDELNRKFEEFIRKMREEIRIEAQRQLIAV 236          
BLAST of Cc_v2.0_19422.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BSS4|V7BSS4_PHAVU (DUF4408 domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G140600g PE=4 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.685e-42
Identity = 97/162 (59.88%), Postives = 112/162 (69.14%), Query Frame = 0
Query:    1 MAKKAKTSLMKNSSDSDDFDDQFQPSNILSETNSRVSDMVVVPLVESFESPENVPLI-------EEYNEEDSEGDEDQEEGTLCSKTEGSESEGYVSQEMKEGELESE-VEEAEYDEHGETTMTTN-EELVNTEELNRKFEEFIRKMKEEIRIEAQRQLIAV 153
            +A  AKT+L+ NSSDSD   D+  PSN+     + VSDMVV PLVE F SPENV L+       EEY+EE  E   DQE+ TLC+KTEG ES GY+++E  E       VE A  DE  E T TTN EEL+NT+ELNRKFEEFIRKMKEEIRIEAQRQLIAV
Sbjct:   80 LAFVAKTALV-NSSDSDF--DKLLPSNLSETKTTTVSDMVVAPLVEGFASPENVCLVVEEQKGPEEYSEEVYE---DQEQNTLCTKTEGRESGGYITEEEIEEGESDSEVEVAVDDELAEATTTTNNEELLNTDELNRKFEEFIRKMKEEIRIEAQRQLIAV 235          
BLAST of Cc_v2.0_19422.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KKV1|A0A4D6KKV1_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g857 PE=4 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 3.102e-37
Identity = 103/162 (63.58%), Postives = 117/162 (72.22%), Query Frame = 0
Query:    1 MAKKAKTSLMKNSSDSDDFDDQFQPSNILSETNSRVSDMVVVPLVESFESPENVPLI-------EEYNEEDSEGDEDQEEGTLCSKTEGSESEGYVSQE-MKEGELESEVEEAEYDEHGETTMTTNEELVNT-EELNRKFEEFIRKMKEEIRIEAQRQLIAV 153
            +A  AKTSLM +SSDSD   DQ  PSN+     + VSDMVV PLVESF SPENV L+       EEY+EE SE DEDQE+ T   KTEG ESEGY++ E +KEGE +SEVE A  DE  ETT TTN E +   +ELNRKFEEFIRKMKEEIRIEA+RQLIAV
Sbjct:   80 LAFVAKTSLM-SSSDSDF--DQLLPSNLSETKTTTVSDMVVAPLVESFASPENVCLVVEEQQGQEEYSEEVSE-DEDQEQDT---KTEGRESEGYITDEDIKEGESDSEVEMALDDELAETTTTTNNEELLNTDELNRKFEEFIRKMKEEIRIEARRQLIAV 234          
BLAST of Cc_v2.0_19422.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3S402|A0A0S3S402_PHAAN (DUF4408 domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.05G093700 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 7.959e-37
Identity = 104/162 (64.20%), Postives = 117/162 (72.22%), Query Frame = 0
Query:    1 MAKKAKTSLMKNSSDSDDFDDQFQPSNILSETNSRVSDMVVVPLVESFESPENVPLI-------EEYNEEDSEGDEDQEEGTLCSKTEGSESEGYVSQE-MKEGELESEVEEAEYDEHGETTMTTNEELVNT-EELNRKFEEFIRKMKEEIRIEAQRQLIAV 153
            +A  AK SLM NSSDSD FD   QPS++     + VSDMVV PLVESF SPENV L+       EEY EE SE DEDQE+ T   KTEG ESEGY+++E +KEGE +SEVE A  DE  ETT TTN E +   +ELNRKFEEFIRKMKEEIRIEAQRQLIAV
Sbjct:   80 LAFVAKMSLM-NSSDSD-FD---QPSDLSETKTTTVSDMVVAPLVESFASPENVCLVVEEQHGQEEYTEEVSE-DEDQEQDT---KTEGRESEGYITEEEIKEGESDSEVEMALDDELAETTTTTNNEELLNTDELNRKFEEFIRKMKEEIRIEAQRQLIAV 232          
BLAST of Cc_v2.0_19422.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9VE56|A0A0L9VE56_PHAAN (DUF4408 domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0070020 PE=4 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 7.959e-37
Identity = 104/162 (64.20%), Postives = 117/162 (72.22%), Query Frame = 0
Query:    1 MAKKAKTSLMKNSSDSDDFDDQFQPSNILSETNSRVSDMVVVPLVESFESPENVPLI-------EEYNEEDSEGDEDQEEGTLCSKTEGSESEGYVSQE-MKEGELESEVEEAEYDEHGETTMTTNEELVNT-EELNRKFEEFIRKMKEEIRIEAQRQLIAV 153
            +A  AK SLM NSSDSD FD   QPS++     + VSDMVV PLVESF SPENV L+       EEY EE SE DEDQE+ T   KTEG ESEGY+++E +KEGE +SEVE A  DE  ETT TTN E +   +ELNRKFEEFIRKMKEEIRIEAQRQLIAV
Sbjct:   80 LAFVAKMSLM-NSSDSD-FD---QPSDLSETKTTTVSDMVVAPLVESFASPENVCLVVEEQHGQEEYTEEVSE-DEDQEQDT---KTEGRESEGYITEEEIKEGESDSEVEMALDDELAETTTTTNNEELLNTDELNRKFEEFIRKMKEEIRIEAQRQLIAV 232          
BLAST of Cc_v2.0_19422.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A4P7M0|A0A6A4P7M0_LUPAL (DUF4408 domain-containing protein OS=Lupinus albus OX=3870 GN=Lalb_Chr18g0057151 PE=4 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.528e-30
Identity = 87/162 (53.70%), Postives = 102/162 (62.96%), Query Frame = 0
Query:    1 MAKKAKTSLMKNSSDSDDFDDQF-QPSNILSETNSRVSDMVVVPLVESFESPENVPLIEE--------YNEEDSEGDEDQEEGTLCSKTEGSESEGYVSQEMKEGELESEVEEAEYDEHGETTMTTNEELVNTEELNRKFEEFIRKMKEEIRIEAQRQLIAV 153
            +A  AKTSL   SS +  FD +F Q S  LSE N+ VS    VP   S E  EN PL+ E         NEE  E  E+QE  TL + TEG ++E Y+       E ESEVE+   DE  +TTMT NE+L+NT+ELNRKFEEFIRKMKEEIRIEAQRQLIAV
Sbjct:   77 LAFIAKTSLKNPSSPTSVFDLEFNQESLNLSEINAPVS----VPFRSS-EFQENAPLMVEEQVLEQAKCNEEVLEASEEQENETLYALTEGKDNESYIE------ETESEVED---DEVADTTMTINEQLINTDELNRKFEEFIRKMKEEIRIEAQRQLIAV 224          
BLAST of Cc_v2.0_19422.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A394B9Z6|A0A394B9Z6_LUPAN (DUF4408 domain-containing protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_27164 PE=4 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.928e-30
Identity = 84/157 (53.50%), Postives = 101/157 (64.33%), Query Frame = 0
Query:    1 MAKKAKTSLMKNSSDSDDFDDQFQPSNI-LSETNSRVSDMVVVPLVESFESPENVPLIEE---YNEEDSEGDEDQEEGTLCSKTEGSESEGYVSQEMKEGELESEVEEAEYDEHGETTMTTNEELVNTEELNRKFEEFIRKMKEEIRIEAQRQLIAV 153
            +A  AKTSLM  S  +  FD +F   ++ LSE N+     V VP   S E  E VPL+ E    NEE  +  E+QE+ TL + TEG ++E Y+       E ESEVE   YDE  +TTM  NEEL+NT+ELNRKFEEFIRKMKEEIRIEAQRQLIAV
Sbjct:   78 LAFIAKTSLMNPSPPTSAFDLEFNEESLNLSEINNAP---VFVPFRSS-EFQETVPLMVEKQVLNEEVLDAAEEQEDETLYTLTEGKDNESYIE------ETESEVE---YDEVEDTTMKINEELINTDELNRKFEEFIRKMKEEIRIEAQRQLIAV 221          
BLAST of Cc_v2.0_19422.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8K7N4|A0A8B8K7N4_ABRPR (Uncharacterized protein LOC113853023 OS=Abrus precatorius OX=3816 GN=LOC113853023 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.174e-28
Identity = 88/161 (54.66%), Postives = 108/161 (67.08%), Query Frame = 0
Query:    1 MAKKAKTSLMKNSSDSDDFDDQFQPSNILSETNSRVSDMVVVPLVESFESPENVPLIEEYNEE-------DSEGDEDQEEGTLCSKTEGSESEGYVSQEMKEGELESEVEE-AEYDEHGETTMTTNEELVNTEELNRKFEEFIRKMKEEIRIEAQRQLIAV 153
            +A  AK+SL ++ SDSD +  Q Q SN LSET + VSD VVV L  S ES ENVPL++E   +       +    EDQEE T   K+EG ESE Y+++E  E        E A+ DE  E+ +T+NEELVNT+ELN+KFEEFIRKMKEEIRIEAQRQLIAV
Sbjct:   81 LAFLAKSSL-QSVSDSDFY--QLQASN-LSETKAPVSDTVVVSLGSS-ESQENVPLMDEAQAKWQEEYSEEYSEAEDQEEST---KSEGKESEVYIAEEEDEEGEIESEVEVAQDDELEESIITSNEELVNTDELNKKFEEFIRKMKEEIRIEAQRQLIAV 233          
BLAST of Cc_v2.0_19422.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445GSF7|A0A445GSF7_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_040642 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.940e-25
Identity = 88/158 (55.70%), Postives = 102/158 (64.56%), Query Frame = 0
Query:    5 AKTSLMKNSSDSDDFDDQFQPSNILSETNSRVSDMVVVPLVESFESPENVPL-IEE-------YNEEDSEGDEDQEEGTLCS-KTEGSESEGYVSQEMKEGELESEVEEAEYDEHGETTMTTNEELVNTEELNRKFEEFIRKMKEEIRIEAQRQLIAV 153
            AKTSLM  SS SD FD      N+     + VS+M VV L  SFESPENVPL +EE       YNEE SE  E QEE  LCS KTEG ESE ++++E +  E + E E          T+TTNE+LVNT +L +KFEEFIRKMKEEIRIEAQRQLI V
Sbjct:   54 AKTSLMI-SSYSDSFD---HLQNLFETKPTIVSNMDVVHL-GSFESPENVPLGVEEQVKLQEEYNEEVSEEGEYQEEAILCSTKTEGKESEAHITEEEEIEEEDEEGETK--------TITTNEDLVNTNDLTKKFEEFIRKMKEEIRIEAQRQLIVV 198          
BLAST of Cc_v2.0_19422.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:4223008-4223613 FORWARD LENGTH=201)

HSP 1 Score: 50.8322 bits (120), Expect = 3.899e-8
Identity = 22/29 (75.86%), Postives = 27/29 (93.10%), Query Frame = 0
Query:  125 EELNRKFEEFIRKMKEEIRIEAQRQLIAV 153
            EE+N+KF+EFIRKMKEE+RIEA+R LI V
Sbjct:  173 EEMNKKFDEFIRKMKEELRIEAKRHLILV 201          
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_19422.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151T6K2|A0A151T6K2_CAJCA1.222e-10098.04DUF4408 domain-containing protein OS=Cajanus cajan... [more]
tr|A0AA86T4A5|A0AA86T4A5_9FABA3.523e-4465.43Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|V7BSS4|V7BSS4_PHAVU3.685e-4259.88DUF4408 domain-containing protein OS=Phaseolus vul... [more]
tr|A0A4D6KKV1|A0A4D6KKV1_VIGUN3.102e-3763.58Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0A0S3S402|A0A0S3S402_PHAAN7.959e-3764.20DUF4408 domain-containing protein OS=Vigna angular... [more]
tr|A0A0L9VE56|A0A0L9VE56_PHAAN7.959e-3764.20DUF4408 domain-containing protein OS=Phaseolus ang... [more]
tr|A0A6A4P7M0|A0A6A4P7M0_LUPAL2.528e-3053.70DUF4408 domain-containing protein OS=Lupinus albus... [more]
tr|A0A394B9Z6|A0A394B9Z6_LUPAN7.928e-3053.50DUF4408 domain-containing protein OS=Lupinus angus... [more]
tr|A0A8B8K7N4|A0A8B8K7N4_ABRPR1.174e-2854.66Uncharacterized protein LOC113853023 OS=Abrus prec... [more]
tr|A0A445GSF7|A0A445GSF7_GLYSO1.940e-2555.70Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
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BLAST of Cc_v2.0_19422.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Cc_v2.0_19422.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|3.899e-875.86Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34947TRANSMEMBRANE PROTEINcoord: 7..151

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_19422.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19422.1; Name=Cc_v2.0_19422.1; organism=Cajanus cajan; type=mRNA; length=462bp
ATGGCAAAGAAAGCCAAGACCTCACTCATGAAGAATTCTTCAGATTCTGA
TGATTTTGATGACCAGTTTCAACCTTCCAATATTCTGTCAGAGACAAATT
CAAGGGTTTCTGACATGGTGGTTGTCCCTTTGGTGGAAAGTTTTGAGTCC
CCAGAGAATGTTCCTCTCATagaggaatacaatgaagaagattcagaagg
tgatgaagatcaagaagaagGTACCTTGTGTAGCAAAACCGAAGGAAGCG
AAAGTGAAGGTTATGTTTCACAAGAGATGAAAGAAGGAGAATTAGAAAGT
GAGGTTGAGGAGGCAGAATATGATGAACATGGAGAAACAACAATGACAAC
AAATGAAGAGCTAGTGAACACAGAAGAACTGAACAGAAAGTTTGAAGAGT
TCATAAGGAAAATGAAAGAAGAGATCAGAATTGAAGCTCAAAGACAGCTT
ATTGCAGTTTAA
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_19422.1

>drCajCajn.Asha.2.0.Cc_v2.0_19422.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19422.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_19422.1; organism=Cajanus cajan; type=polypeptide; length=153bp
MAKKAKTSLMKNSSDSDDFDDQFQPSNILSETNSRVSDMVVVPLVESFES
PENVPLIEEYNEEDSEGDEDQEEGTLCSKTEGSESEGYVSQEMKEGELES
EVEEAEYDEHGETTMTTNEELVNTEELNRKFEEFIRKMKEEIRIEAQRQL
IAV
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mRNA from alignment at CcLG08_v2.0:52767792..52769017-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_19422.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19422.1; Name=Cc_v2.0_19422.1; organism=Cajanus cajan; type=mRNA; length=1226bp; location=Sequence derived from: CcLG08_v2.0:52767792..52769017- (Cajanus cajan
ATGGCAAAGAAAGGTGACACCTAGAACCTTCTCTTCATTTCCAAACCACA TTATTTATTTATTTTCAATTATTTCTTCCAAAATATTACATTGAGTAATT CATGTCTCTTTTTTCTTGGTCTACGTTGTTATCTACTAATTAATGCCAAA GTTTGGGATTCATCAGAACTCAATTTCAAAAATTCCAATAATGTTATATA CCCCGCGTGTAATTATGACGAGCTTTGAAAACCTTCTTGTTCATATCTTT CCCGTATCGTACGATCCATAAAAATTAGGCCAAATGGCTACTGTACGTGG CAACCAAAGAAACCATTATAGATTATTTAGGGTTAGTAATAGTAGTATAA ATAGATGTGAGCTTATAGTTCAGTCTTCACATAACACCACAGGACTACAC ATCTCATCATTTCATCACTCCAAAGTCCAAAGCAATCTTCACACTTTCTC TCACAAATTTTTCTCAGTACCTTTTTTTATTTTTTGTTTTTTATTTTTAG CCTTCTATTAATTTAAGCTCTTTGATGGATCAAAATCAAAATGAGGGTCA GGTTCTGATGAAAGTTATAATAAACAACAAACATTTTTTGAATAGAACTT TGCAGTTTGTTCTCTCAGTTTCAGTGTTTTGTGTTTTTGTTTGGTACTCT TCCGGCTTTTCCATACATCCTCAGTCTTTCAGTGCATACTTCTCCACGTG CCTTCTCTCCATGTTCACTCACACCCTTGAAAGGAAAATCATGTTTCTCA TTTGCAATGGAATCCTTGCATTTGTAGCCAAGACCTCACTCATGAAGAAT TCTTCAGATTCTGATGATTTTGATGACCAGTTTCAACCTTCCAATATTCT GTCAGAGACAAATTCAAGGGTTTCTGACATGGTGGTTGTCCCTTTGGTGG AAAGTTTTGAGTCCCCAGAGAATGTTCCTCTCATAGAGGAATACAATGAA GAAGATTCAGAAGGTGATGAAGATCAAGAAGAAGGTACCTTGTGTAGCAA AACCGAAGGAAGCGAAAGTGAAGGTTATGTTTCACAAGAGATGAAAGAAG GAGAATTAGAAAGTGAGGTTGAGGAGGCAGAATATGATGAACATGGAGAA ACAACAATGACAACAAATGAAGAGCTAGTGAACACAGAAGAACTGAACAG AAAGTTTGAAGAGTTCATAAGGAAAATGAAAGAAGAGATCAGAATTGAAG CTCAAAGACAGCTTATTGCAGTTTAA
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Coding sequence (CDS) from alignment at CcLG08_v2.0:52767792..52769017-

>drCajCajn.Asha.2.0.Cc_v2.0_19422.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_19422.1; Name=Cc_v2.0_19422.1; organism=Cajanus cajan; type=CDS; length=462bp; location=Sequence derived from: CcLG08_v2.0:52767792..52769017- (Cajanus cajan
ATGGCAAAGAAAGCCAAGACCTCACTCATGAAGAATTCTTCAGATTCTGA
TGATTTTGATGACCAGTTTCAACCTTCCAATATTCTGTCAGAGACAAATT
CAAGGGTTTCTGACATGGTGGTTGTCCCTTTGGTGGAAAGTTTTGAGTCC
CCAGAGAATGTTCCTCTCATAGAGGAATACAATGAAGAAGATTCAGAAGG
TGATGAAGATCAAGAAGAAGGTACCTTGTGTAGCAAAACCGAAGGAAGCG
AAAGTGAAGGTTATGTTTCACAAGAGATGAAAGAAGGAGAATTAGAAAGT
GAGGTTGAGGAGGCAGAATATGATGAACATGGAGAAACAACAATGACAAC
AAATGAAGAGCTAGTGAACACAGAAGAACTGAACAGAAAGTTTGAAGAGT
TCATAAGGAAAATGAAAGAAGAGATCAGAATTGAAGCTCAAAGACAGCTT
ATTGCAGTTTAA
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