XM_058886511.1
Transcript Overview
References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XQ55|A0A9D4XQ55_PEA (Uncharacterized protein OS=Pisum sativum OX=3888 GN=KIW84_030744 PE=4 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 3.515e-77 Identity = 148/171 (86.55%), Postives = 157/171 (91.81%), Query Frame = 0 Query: 1 MSGSSDEEISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIELLND 171 MSGSSDEEISNGNRDGYQRGGSDGDDDEDEEE RKKK NR RVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLS+SSSLTA SSRN+NVSSRGKVVI+HG+D SSS +A R+GFGCKFCFSRPSV+EN DGSPSSDPNDPKFTHSM++SLIENNDF SKECN IE L D Sbjct: 1 MSGSSDEEISNGNRDGYQRGGSDGDDDEDEEEYRKKK-NRGRVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSSSSSLTAASSRNVNVSSRGKVVIIHGNDTDSSSNTATRNGFGCKFCFSRPSVLENPDGSPSSDPNDPKFTHSMLKSLIENNDFYSKECNTLIESLID 170
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|Q2HUY8|Q2HUY8_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11427224 PE=4 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 5.930e-60 Identity = 118/174 (67.82%), Postives = 141/174 (81.03%), Query Frame = 0 Query: 1 MSGSSD-EEISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSS----RNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIELL 169 MS SSD EEISN R+GY+RGGSDGDD++DEE+ KKK + R F FGKRLVL QF+KAKNQIRRVRS+K LLS+SSS T ++ RN+NVSSRGKVVI+ G+ S++ R+GFGCKFCFSRP+V+EN +GS SSDPNDPKFTHSM++SL+E NDFCSKECNPHIE L Sbjct: 1 MSASSDDEEISN--RNGYERGGSDGDDEQDEEDATGKKK-KHRTKFDFGKRLVLNQFSKAKNQIRRVRSKKHLLSSSSSSTTITTASFYRNVNVSSRGKVVIIQGEGHNSTT---TRNGFGCKFCFSRPNVLENPNGSTSSDPNDPKFTHSMLKSLLEKNDFCSKECNPHIESL 168
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MC35|A0A4D6MC35_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g3093 PE=4 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 8.131e-36 Identity = 87/170 (51.18%), Postives = 110/170 (64.71%), Query Frame = 0 Query: 1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIE 167 MSG S+EE S+ +R GY+ GGSD +D E + + + R RV GFGK +V+ QF KAK QIRRVRSRK+LL G SR N GKV++VHGD R G GC FCFSRP V+E+ + SP+SDPNDP FT +M+R+LI+ NDF SKECNPH++ Sbjct: 1 MSGCSEEEGISFSDADRRGYE-GGSD----DDSEMGKSQLRRRRRVS-GFGK-VVVHQFAKAKKQIRRVRSRKSLL--------GKSRPGN--EEGKVIVVHGD-----CSGGRRRGNGCGFCFSRPKVLESPNESPTSDPNDPNFTQAMLRTLIDKNDFYSKECNPHLD 148
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445FK38|A0A445FK38_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_052274 PE=4 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.621e-32 Identity = 80/169 (47.34%), Postives = 107/169 (63.31%), Query Frame = 0 Query: 1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMEN-SDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPH 165 MSG SDEE S +R Y+ G DDD + ++ + + +R R+ GFGK +V+ QFTKAK Q+RR+RSR +LL+ S GKVVIV +G + RSG C+FCFSRP V+E+ ++ SPSSDPNDP FTH+M+R+L++ NDF SKECNPH Sbjct: 1 MSGCSDEEEISFSESDRHRYEGGSDGDDDDSEIRKN-EHRSSRRRMGSGFGK-VVVHQFTKAKKQVRRIRSRTSLLAKSEE--------------GKVVIV-------EAGVSGRSG--CRFCFSRPKVLESPNEESPSSDPNDPNFTHAMLRTLMDKNDFYSKECNPH 144
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9U967|A0A0L9U967_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g270000 PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.578e-32 Identity = 82/171 (47.95%), Postives = 109/171 (63.74%), Query Frame = 0 Query: 1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARV-DFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIE 167 MSG S+EE S+ +R GY+ GGSD +D E + + + R RV DFG ++V+RQF KAK QIRRVRSRK+LL+ SR N GKV++V GD G G+ FCFSRP V+E+ + SP+SDPNDP FT +M+R+L++ NDF SKECNPH++ Sbjct: 1 MSGCSEEEGVSFSDADRRGYE-GGSD----DDSEMGKSQLRRRRRVSDFG---KVVVRQFAKAKKQIRRVRSRKSLLA--------KSRQGN--EEGKVIVVDGDSGGRRRGNGC------GFCFSRPKVLESPNESPTSDPNDPNFTQAMLRTLMDKNDFYSKECNPHLD 147
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0L2S1|A0A8T0L2S1_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0057030 PE=4 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.712e-32 Identity = 82/171 (47.95%), Postives = 109/171 (63.74%), Query Frame = 0 Query: 1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARV-DFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIE 167 MSG S+EE S+ +R GY+ GGSD +D E + + + R RV DFG ++V+RQF KAK QIRRVRSRK+LL+ SR N GKV++V GD G G+ FCFSRP V+E+ + SP+SDPNDP FT +M+R+L++ NDF SKECNPH++ Sbjct: 11 MSGCSEEEGVSFSDADRRGYE-GGSD----DDSEMGKSQLRRRRRVSDFG---KVVVRQFAKAKKQIRRVRSRKSLLA--------KSRQGN--EEGKVIVVDGDSGGRRRGNGC------GFCFSRPKVLESPNESPTSDPNDPNFTQAMLRTLMDKNDFYSKECNPHLD 157
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RZZ8|A0A0S3RZZ8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G378800 PE=4 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.873e-32 Identity = 82/171 (47.95%), Postives = 109/171 (63.74%), Query Frame = 0 Query: 1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARV-DFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIE 167 MSG S+EE S+ +R GY+ GGSD +D E + + + R RV DFG ++V+RQF KAK QIRRVRSRK+LL+ SR N GKV++V GD G G+ FCFSRP V+E+ + SP+SDPNDP FT +M+R+L++ NDF SKECNPH++ Sbjct: 13 MSGCSEEEGVSFSDADRRGYE-GGSD----DDSEMGKSQLRRRRRVSDFG---KVVVRQFAKAKKQIRRVRSRKSLLA--------KSRQGN--EEGKVIVVDGDSGGRRRGNGC------GFCFSRPKVLESPNESPTSDPNDPNFTQAMLRTLMDKNDFYSKECNPHLD 159
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1NBL7|I1NBL7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102664744 PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.181e-32 Identity = 80/169 (47.34%), Postives = 106/169 (62.72%), Query Frame = 0 Query: 1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMEN-SDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPH 165 MSG SDEE S +R Y+ G DDD + ++ + + +R R+ FGK +V+RQFTKAK Q+RR+RSR +LL+ S GKVVIV +G + RSG C+FCFSRP V+E+ ++ SPSSDPNDP FTH M+R+L++ NDF SKECNPH Sbjct: 1 MSGCSDEEEISFSESDRHRYEGGSDGDDDDSEIRKN-EHRSSRRRMGSAFGK-VVVRQFTKAKKQVRRIRSRTSLLAKSEE--------------GKVVIVE-------AGVSGRSG--CRFCFSRPKVLESPNEESPSSDPNDPNFTHGMLRTLMDKNDFYSKECNPH 144
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SCS9|A0AA86SCS9_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS2442 PE=4 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 6.831e-32 Identity = 76/170 (44.71%), Postives = 102/170 (60.00%), Query Frame = 0 Query: 1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIE 167 MS S EE S+ +R GY+ GGSD D + + + R + R GFGK +V+ QF KAK +IR VRSRK+LL+ S S + GK++ V GD G GC+FCF RP V+E+ + SP+SDPNDP FTH+M+R+L+E NDF S ECNPH++ Sbjct: 1 MSACSQEEGVSFSDADRRGYE-GGSDDDSEIGKSQLRSR-----RTGSGFGK-VVVHQFAKAKKKIRGVRSRKSLLAKSRS----------GNDEGKLIGVDGD-----VSERRWRGNGCRFCFLRPKVLESPNESPTSDPNDPNFTHAMLRTLMEKNDFYSHECNPHLD 148
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TN76|A0A1S3TN76_VIGRR (Uncharacterized protein LOC106757138 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757138 PE=4 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.331e-31 Identity = 79/170 (46.47%), Postives = 105/170 (61.76%), Query Frame = 0 Query: 1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIE 167 MSG S+EE S+ + GY+ GGSD +D E + + + R RV GFGK +V+ QF KAK QIRRVRSRK+LL+ S + GKV++V R G GC FCFSRP V+E+ + SP+SDPNDP FT +M+R+L++ NDF SKECNPH++ Sbjct: 1 MSGCSEEEGVSFSDADHRGYE-GGSD----DDSEMGKSQLRRRRRVS-GFGK-VVVHQFAKAKKQIRRVRSRKSLLAKSHP----------GNEEGKVIVV-----AGDGSGGRRRGNGCGFCFSRPKVLESPNESPTSDPNDPNFTQAMLRTLMDKNDFYSKECNPHLD 148
BLAST of XM_058886511.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:9304105-9304509 FORWARD LENGTH=134) HSP 1 Score: 47.3654 bits (111), Expect = 4.052e-7 Identity = 17/27 (62.96%), Postives = 22/27 (81.48%), Query Frame = 0 Query: 139 NDPKFTHSMMRSLIENNDFCSKECNPH 165 ND +F+H M+R ++E NDFCS ECNPH Sbjct: 107 NDERFSHEMLRVMLETNDFCSDECNPH 133 The following BLAST results are available for this feature:
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt Swissprot) Total hits: 0
BLAST of XM_058886511.1 vs. Araport11
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs arabidopsis Araport11) Total hits: 1
InterPro
Analysis Name: InterProScan Analysis for Vicia villosa cv. AU Merit genome v1.0
Date Performed: 2024-08-12
Sequences
The
following sequences are available for this feature:
mRNA sequence >drVicVill.AUMerit.1.0.rna-XM_058886511.1 ID=drVicVill.AUMerit.1.0.rna-XM_058886511.1; Name=XM_058886511.1; organism=Vicia villosa; type=mRNA; length=516bpback to top protein sequence of drVicVill.AUMerit.1.0.rna-XM_058886511.1 >drVicVill.AUMerit.1.0.rna-XM_058886511.1 ID=drVicVill.AUMerit.1.0.rna-XM_058886511.1; Name=drVicVill.AUMerit.1.0.rna-XM_058886511.1; organism=Vicia villosa; type=polypeptide; length=171bpback to top mRNA from alignment at LG6:150587225..150588915- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>drVicVill.AUMerit.1.0.rna-XM_058886511.1 ID=drVicVill.AUMerit.1.0.rna-XM_058886511.1; Name=XM_058886511.1; organism=Vicia villosa; type=mRNA; length=1691bp; location=Sequence derived from: LG6:150587225..150588915- (Vicia villosaback to top Coding sequence (CDS) from alignment at LG6:150587225..150588915- >drVicVill.AUMerit.1.0.rna-XM_058886511.1 ID=drVicVill.AUMerit.1.0.rna-XM_058886511.1; Name=XM_058886511.1; organism=Vicia villosa; type=CDS; length=687bp; location=Sequence derived from: LG6:150587225..150588915- (Vicia villosaback to top |