XM_058886511.1

Transcript Overview
NameXM_058886511.1
Unique NamedrVicVill.AUMerit.1.0.rna-XM_058886511.1
TypemRNA
OrganismVicia villosa (vetch)
Sequence length516
References
External references for this mRNA
DatabaseAccession
GeneID131614987
GenBankXM_058886511.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
LG6chromosomeLG6:150587225..150588915 -Vicia villosa cv. AU Merit genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjvvaL331Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvvaL0470Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvvaL409Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvvaL422Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvvaL506Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvvaL514Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvvaL0668Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvvaL0732Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvvaL0742Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvvaL0898Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvvaL0899Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvvaL1203Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
pvvvaL070Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvvaL095Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vasvvaL114Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvvaL500Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvvaL509Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvvaL728Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvvaL730Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vasvvaL797Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvvaL801Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vrvvvaL307Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvvaL463Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvvaL596Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvvaL804Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvvaL629Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vvavvaL073Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaL049Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vumvvaL114Vigna umbellata FF25 genome v1.0Vigna umbellata
vumvvaL199Vigna umbellata FF25 genome v1.0Vigna umbellata
vumvvaL204Vigna umbellata FF25 genome v1.0Vigna umbellata
vumvvaL616Vigna umbellata FF25 genome v1.0Vigna umbellata
vssvvaL645Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvvaL649Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvvaL642Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvvaL656Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvvaL887Vicia sativa cv. Studenica genome v1.0Vicia sativa

Orthologs
Gene/TranscriptAssemblySpecies
Va03G079280.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.5g172160.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vum_04G02835.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigan.04G378800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_014639735.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg31181.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.001G221000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LOC131614987drVicVill.AUMerit.1.0.gene-LOC131614987Vicia villosagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_058886511.1-4drVicVill.AUMerit.1.0.exon-XM_058886511.1-4Vicia villosaexon
exon-XM_058886511.1-3drVicVill.AUMerit.1.0.exon-XM_058886511.1-3Vicia villosaexon
exon-XM_058886511.1-2drVicVill.AUMerit.1.0.exon-XM_058886511.1-2Vicia villosaexon
exon-XM_058886511.1-1drVicVill.AUMerit.1.0.exon-XM_058886511.1-1Vicia villosaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
XP_058742494.1drVicVill.AUMerit.1.0.cds-XP_058742494.1_4Vicia villosaCDS
XP_058742494.1drVicVill.AUMerit.1.0.cds-XP_058742494.1_3Vicia villosaCDS
XP_058742494.1drVicVill.AUMerit.1.0.cds-XP_058742494.1_2Vicia villosaCDS
XP_058742494.1drVicVill.AUMerit.1.0.cds-XP_058742494.1Vicia villosaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVicVill.AUMerit.1.0.rna-XM_058886511.1drVicVill.AUMerit.1.0.rna-XM_058886511.1Vicia villosapolypeptide
drVicVill.AUMerit.1.0.rna-XM_058886511.1drVicVill.AUMerit.1.0.rna-XM_058886511.1-proteinVicia villosapolypeptide


Homology
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4XQ55|A0A9D4XQ55_PEA (Uncharacterized protein OS=Pisum sativum OX=3888 GN=KIW84_030744 PE=4 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 3.515e-77
Identity = 148/171 (86.55%), Postives = 157/171 (91.81%), Query Frame = 0
Query:    1 MSGSSDEEISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIELLND 171
            MSGSSDEEISNGNRDGYQRGGSDGDDDEDEEE RKKK NR RVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLS+SSSLTA SSRN+NVSSRGKVVI+HG+D  SSS +A R+GFGCKFCFSRPSV+EN DGSPSSDPNDPKFTHSM++SLIENNDF SKECN  IE L D
Sbjct:    1 MSGSSDEEISNGNRDGYQRGGSDGDDDEDEEEYRKKK-NRGRVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSSSSSLTAASSRNVNVSSRGKVVIIHGNDTDSSSNTATRNGFGCKFCFSRPSVLENPDGSPSSDPNDPKFTHSMLKSLIENNDFYSKECNTLIESLID 170          
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|Q2HUY8|Q2HUY8_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11427224 PE=4 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.930e-60
Identity = 118/174 (67.82%), Postives = 141/174 (81.03%), Query Frame = 0
Query:    1 MSGSSD-EEISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSS----RNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIELL 169
            MS SSD EEISN  R+GY+RGGSDGDD++DEE+   KKK + R  F FGKRLVL QF+KAKNQIRRVRS+K LLS+SSS T  ++    RN+NVSSRGKVVI+ G+   S++    R+GFGCKFCFSRP+V+EN +GS SSDPNDPKFTHSM++SL+E NDFCSKECNPHIE L
Sbjct:    1 MSASSDDEEISN--RNGYERGGSDGDDEQDEEDATGKKK-KHRTKFDFGKRLVLNQFSKAKNQIRRVRSKKHLLSSSSSSTTITTASFYRNVNVSSRGKVVIIQGEGHNSTT---TRNGFGCKFCFSRPNVLENPNGSTSSDPNDPKFTHSMLKSLLEKNDFCSKECNPHIESL 168          
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MC35|A0A4D6MC35_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g3093 PE=4 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.131e-36
Identity = 87/170 (51.18%), Postives = 110/170 (64.71%), Query Frame = 0
Query:    1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIE 167
            MSG S+EE    S+ +R GY+ GGSD    +D E  + + + R RV  GFGK +V+ QF KAK QIRRVRSRK+LL        G SR  N    GKV++VHGD          R G GC FCFSRP V+E+ + SP+SDPNDP FT +M+R+LI+ NDF SKECNPH++
Sbjct:    1 MSGCSEEEGISFSDADRRGYE-GGSD----DDSEMGKSQLRRRRRVS-GFGK-VVVHQFAKAKKQIRRVRSRKSLL--------GKSRPGN--EEGKVIVVHGD-----CSGGRRRGNGCGFCFSRPKVLESPNESPTSDPNDPNFTQAMLRTLIDKNDFYSKECNPHLD 148          
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445FK38|A0A445FK38_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_052274 PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.621e-32
Identity = 80/169 (47.34%), Postives = 107/169 (63.31%), Query Frame = 0
Query:    1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMEN-SDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPH 165
            MSG SDEE    S  +R  Y+ G    DDD +  ++ + + +R R+  GFGK +V+ QFTKAK Q+RR+RSR +LL+ S                GKVVIV        +G + RSG  C+FCFSRP V+E+ ++ SPSSDPNDP FTH+M+R+L++ NDF SKECNPH
Sbjct:    1 MSGCSDEEEISFSESDRHRYEGGSDGDDDDSEIRKN-EHRSSRRRMGSGFGK-VVVHQFTKAKKQVRRIRSRTSLLAKSEE--------------GKVVIV-------EAGVSGRSG--CRFCFSRPKVLESPNEESPSSDPNDPNFTHAMLRTLMDKNDFYSKECNPH 144          
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9U967|A0A0L9U967_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g270000 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.578e-32
Identity = 82/171 (47.95%), Postives = 109/171 (63.74%), Query Frame = 0
Query:    1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARV-DFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIE 167
            MSG S+EE    S+ +R GY+ GGSD    +D E  + + + R RV DFG   ++V+RQF KAK QIRRVRSRK+LL+         SR  N    GKV++V GD  G   G+         FCFSRP V+E+ + SP+SDPNDP FT +M+R+L++ NDF SKECNPH++
Sbjct:    1 MSGCSEEEGVSFSDADRRGYE-GGSD----DDSEMGKSQLRRRRRVSDFG---KVVVRQFAKAKKQIRRVRSRKSLLA--------KSRQGN--EEGKVIVVDGDSGGRRRGNGC------GFCFSRPKVLESPNESPTSDPNDPNFTQAMLRTLMDKNDFYSKECNPHLD 147          
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0L2S1|A0A8T0L2S1_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0057030 PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.712e-32
Identity = 82/171 (47.95%), Postives = 109/171 (63.74%), Query Frame = 0
Query:    1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARV-DFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIE 167
            MSG S+EE    S+ +R GY+ GGSD    +D E  + + + R RV DFG   ++V+RQF KAK QIRRVRSRK+LL+         SR  N    GKV++V GD  G   G+         FCFSRP V+E+ + SP+SDPNDP FT +M+R+L++ NDF SKECNPH++
Sbjct:   11 MSGCSEEEGVSFSDADRRGYE-GGSD----DDSEMGKSQLRRRRRVSDFG---KVVVRQFAKAKKQIRRVRSRKSLLA--------KSRQGN--EEGKVIVVDGDSGGRRRGNGC------GFCFSRPKVLESPNESPTSDPNDPNFTQAMLRTLMDKNDFYSKECNPHLD 157          
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RZZ8|A0A0S3RZZ8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G378800 PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.873e-32
Identity = 82/171 (47.95%), Postives = 109/171 (63.74%), Query Frame = 0
Query:    1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARV-DFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIE 167
            MSG S+EE    S+ +R GY+ GGSD    +D E  + + + R RV DFG   ++V+RQF KAK QIRRVRSRK+LL+         SR  N    GKV++V GD  G   G+         FCFSRP V+E+ + SP+SDPNDP FT +M+R+L++ NDF SKECNPH++
Sbjct:   13 MSGCSEEEGVSFSDADRRGYE-GGSD----DDSEMGKSQLRRRRRVSDFG---KVVVRQFAKAKKQIRRVRSRKSLLA--------KSRQGN--EEGKVIVVDGDSGGRRRGNGC------GFCFSRPKVLESPNESPTSDPNDPNFTQAMLRTLMDKNDFYSKECNPHLD 159          
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1NBL7|I1NBL7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=102664744 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.181e-32
Identity = 80/169 (47.34%), Postives = 106/169 (62.72%), Query Frame = 0
Query:    1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMEN-SDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPH 165
            MSG SDEE    S  +R  Y+ G    DDD +  ++ + + +R R+   FGK +V+RQFTKAK Q+RR+RSR +LL+ S                GKVVIV        +G + RSG  C+FCFSRP V+E+ ++ SPSSDPNDP FTH M+R+L++ NDF SKECNPH
Sbjct:    1 MSGCSDEEEISFSESDRHRYEGGSDGDDDDSEIRKN-EHRSSRRRMGSAFGK-VVVRQFTKAKKQVRRIRSRTSLLAKSEE--------------GKVVIVE-------AGVSGRSG--CRFCFSRPKVLESPNEESPSSDPNDPNFTHGMLRTLMDKNDFYSKECNPH 144          
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SCS9|A0AA86SCS9_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS2442 PE=4 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.831e-32
Identity = 76/170 (44.71%), Postives = 102/170 (60.00%), Query Frame = 0
Query:    1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIE 167
            MS  S EE    S+ +R GY+ GGSD D +  + + R +     R   GFGK +V+ QF KAK +IR VRSRK+LL+ S S           +  GK++ V GD            G GC+FCF RP V+E+ + SP+SDPNDP FTH+M+R+L+E NDF S ECNPH++
Sbjct:    1 MSACSQEEGVSFSDADRRGYE-GGSDDDSEIGKSQLRSR-----RTGSGFGK-VVVHQFAKAKKKIRGVRSRKSLLAKSRS----------GNDEGKLIGVDGD-----VSERRWRGNGCRFCFLRPKVLESPNESPTSDPNDPNFTHAMLRTLMEKNDFYSHECNPHLD 148          
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TN76|A0A1S3TN76_VIGRR (Uncharacterized protein LOC106757138 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757138 PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.331e-31
Identity = 79/170 (46.47%), Postives = 105/170 (61.76%), Query Frame = 0
Query:    1 MSGSSDEE---ISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKRLVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHGDDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRSLIENNDFCSKECNPHIE 167
            MSG S+EE    S+ +  GY+ GGSD    +D E  + + + R RV  GFGK +V+ QF KAK QIRRVRSRK+LL+ S             +  GKV++V             R G GC FCFSRP V+E+ + SP+SDPNDP FT +M+R+L++ NDF SKECNPH++
Sbjct:    1 MSGCSEEEGVSFSDADHRGYE-GGSD----DDSEMGKSQLRRRRRVS-GFGK-VVVHQFAKAKKQIRRVRSRKSLLAKSHP----------GNEEGKVIVV-----AGDGSGGRRRGNGCGFCFSRPKVLESPNESPTSDPNDPNFTQAMLRTLMDKNDFYSKECNPHLD 148          
BLAST of XM_058886511.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:9304105-9304509 FORWARD LENGTH=134)

HSP 1 Score: 47.3654 bits (111), Expect = 4.052e-7
Identity = 17/27 (62.96%), Postives = 22/27 (81.48%), Query Frame = 0
Query:  139 NDPKFTHSMMRSLIENNDFCSKECNPH 165
            ND +F+H M+R ++E NDFCS ECNPH
Sbjct:  107 NDERFSHEMLRVMLETNDFCSDECNPH 133          
The following BLAST results are available for this feature:
BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A9D4XQ55|A0A9D4XQ55_PEA3.515e-7786.55Uncharacterized protein OS=Pisum sativum OX=3888 G... [more]
tr|Q2HUY8|Q2HUY8_MEDTR5.930e-6067.82Uncharacterized protein OS=Medicago truncatula OX=... [more]
tr|A0A4D6MC35|A0A4D6MC35_VIGUN8.131e-3651.18Uncharacterized protein OS=Vigna unguiculata OX=39... [more]
tr|A0A445FK38|A0A445FK38_GLYSO1.621e-3247.34Uncharacterized protein OS=Glycine soja OX=3848 GN... [more]
tr|A0A0L9U967|A0A0L9U967_PHAAN2.578e-3247.95Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A8T0L2S1|A0A8T0L2S1_PHAAN2.712e-3247.95Uncharacterized protein OS=Phaseolus angularis OX=... [more]
tr|A0A0S3RZZ8|A0A0S3RZZ8_PHAAN2.873e-3247.95Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|I1NBL7|I1NBL7_SOYBN3.181e-3247.34Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0AA86SCS9|A0AA86SCS9_9FABA6.831e-3244.71Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A1S3TN76|A0A1S3TN76_VIGRR2.331e-3146.47Uncharacterized protein LOC106757138 OS=Vigna radi... [more]
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BLAST of XM_058886511.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of XM_058886511.1 vs. Araport11
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|4.052e-762.96Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia villosa cv. AU Merit genome v1.0
Date Performed: 2024-08-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35123OS07G0633900 PROTEIN-RELATEDcoord: 6..166

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVicVill.AUMerit.1.0.rna-XM_058886511.1 ID=drVicVill.AUMerit.1.0.rna-XM_058886511.1; Name=XM_058886511.1; organism=Vicia villosa; type=mRNA; length=516bp
ATGTCTGGTTCTTCCGATGAAGAGATCTCAAACGGTAATCGCGACGGTTA
CCAACGAGGAGGAAGTGACGGCGATGACGACGAAGATGAAGAAGAGGATC
GAAAGAAGAAGAAGAATCGTGCGAGAGTTGATTTTGGTTTTGGAAAGAGG
TTGGTACTTCGTCAATTTACCAAAGCGAAGAATCAAATTCGGAGAGTTAG
AAGCAGAAAGGCTCTTCTTTCGGCTTCGTCGTCGTTGACTGCGGGGTCTT
CGAGGAATTTGAATGTGAGTAGTAGAGGTAAGGTGGTGATTGTTCATGGT
GATGATTTTGGTAGTAGTAGTGGTAGTGCTGCTCGGAGTGGGTTTGGTTG
TAAGTTTTGTTTTTCGCGTCCTAGTGTAATGGAAAATTCTGATGGGTCTC
CTAGTAGTGATCCTAATGATCCGAAGTTTACTCATTCTATGATGAGGAGT
TTGATAGAAAACAATGATTTTTGTTCCAAAGAATGCAATCCCCATATTGA
ATTATTAAATGATTGA
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protein sequence of drVicVill.AUMerit.1.0.rna-XM_058886511.1

>drVicVill.AUMerit.1.0.rna-XM_058886511.1 ID=drVicVill.AUMerit.1.0.rna-XM_058886511.1; Name=drVicVill.AUMerit.1.0.rna-XM_058886511.1; organism=Vicia villosa; type=polypeptide; length=171bp
MSGSSDEEISNGNRDGYQRGGSDGDDDEDEEEDRKKKKNRARVDFGFGKR
LVLRQFTKAKNQIRRVRSRKALLSASSSLTAGSSRNLNVSSRGKVVIVHG
DDFGSSSGSAARSGFGCKFCFSRPSVMENSDGSPSSDPNDPKFTHSMMRS
LIENNDFCSKECNPHIELLND
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mRNA from alignment at LG6:150587225..150588915-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVicVill.AUMerit.1.0.rna-XM_058886511.1 ID=drVicVill.AUMerit.1.0.rna-XM_058886511.1; Name=XM_058886511.1; organism=Vicia villosa; type=mRNA; length=1691bp; location=Sequence derived from: LG6:150587225..150588915- (Vicia villosa
ATGGTGAAGAAGAATAATAAGAGCAATGGAAGTGGCAAGATGGTAGACGC AAAGGCTATGGCGCCGGTTAGTATGGGCAAAGCCAAAACTATTGCAATTC TCGGTGCTGACAAAGAAAAGTCAGCTGCTATGGTAGGTGCTCAGAAAGTG AAGAGTGGAACCTCTGCTGGATTCAAATGGATCAAGAATCTGTGTAAGAA AAAGAAGTAAGAACAAAAAAAAACTCACTCATTTCCTTGGACTTTTGGAC AGTTTCATATCATGTCTTTGTTAAATACACCATTGGTGCTCAACTATAGT GATTGATTATAATGATTTGGTTTTTAATTTGGAGTACAGAAGTTCATAAT AGCTTTGTTTTCTATATTTCTGGATTTATAATCATAGATAAATTTTACAT TTTTACTTTTATGTCATTTCTGCCACAATGTTCAAATTTTAGGGGGAATT ACAAGTGATGCTTGATCTGATAAACTGATTAATTTGGATTGAATCAATCT ATAAAATGCGTTGGGATGGTTTTTTATGCATTCTAATCTAAACTGAATTT TATAGGGTTCATATCTCTTCCAGTACTGTGTAATTTATCTAATTTGTGTT CTCTTTGTAACCTTTCTTGGCAGGGAATTAGAGCAGGGACCAAGAAACAG AGGTATGAGAAAATTAGTGAAAAAAGGTTTTTACATCAATTTAAGTAAGT TAAATTTTTATGCAGTTGTTTTAGTGCTTATATCATCCACTCCTTCATAA CCTATACTAAGAATTTACGCTCACAGGCCTTGTGTCAAGGTTATCCAACA GAAATTGCTTCATACTTCCATCACTGCCGCTCATTAAGGATTGATGATAA GCCAGATGTGCGTACCAGACCATGTATTGTTGTCATCTTAAGCTATATTT TTATGTGGCCTAACAATTCTCCCTTTATATGATTTTGATCGTTTTTAGGA TATTGGAGGACGTGATATCCAAAAACAGGAAATTTGCGAGGCTGTAAAGT TACCTCTCACACATCACAATTTATACAAGCAAATTGGTATTGATACTCCT CGAGGTGTTTTACTATGCGGCCCCCTTGGAACTAGTAAAATAATGCTTGC CAAAGCTGATGCTAATCATACCACTGCCGCCTTTATCAGGGTTATGGGCT CTGAGTTTGTGCAGAAGTATCTTGGTGAGGTATGAATTTGTCATTTGTGG TTGAAGTGATGGTGACAATGTTGTACTTAGCTGTCCCTGTTTGCTTTTGA AGATTATGTGTTTCAGCTTCTTAATTTTCAATATTACTGTGTTTTTGTAT GTATTTTTTTTCAAAAAGGTTTATCATTGATAAATATTTTATTAGGATTA CTTAAAAGAAAATTTGTATTAAATAAAATTAGAATATATAGTTTTTTTGT ACAAGGGATAAGAAATAAATTGAAGTTGTCTGATTTTCTACATTTCTAAA AAGTATGAAAATGATGTTATCTCTTTTTGAAGAGTACATGCCATATCTCT TTTTGTAGAACATGTATTTCGATTCAGTGGAGGATCAAAGTTTTTCGATT GCCTCAAAGTGTTGTGTTATGCTTTGTAATCAGATATTGCAGCTGCAATT TAACTACATAAAGGAGTATCAAATGTTAGGGGGAAAGTACATTAAGTTGC TTCAGAATGTTGATACTGCACAAACTTGTGAGATAGCATAA
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Coding sequence (CDS) from alignment at LG6:150587225..150588915-

>drVicVill.AUMerit.1.0.rna-XM_058886511.1 ID=drVicVill.AUMerit.1.0.rna-XM_058886511.1; Name=XM_058886511.1; organism=Vicia villosa; type=CDS; length=687bp; location=Sequence derived from: LG6:150587225..150588915- (Vicia villosa
ATGGTGAAGAAGAATAATAAGAGCAATGGAAGTGGCAAGATGGTAGACGC
AAAGGCTATGGCGCCGGTTAGTATGGGCAAAGCCAAAACTATTGCAATTC
TCGGTGCTGACAAAGAAAAGTCAGCTGCTATGGTAGGTGCTCAGAAAGTG
AAGAGTGGAACCTCTGCTGGATTCAAATGGATCAAGAATCTGTGTAAGAA
AAAGAATTGTTTTAGTGCTTATATCATCCACTCCTTCATAACCTATACTA
AGAATTTACGCTCACAGGCCTTGTGTCAAGGTTATCCAACAGAAATTGCT
TCATACTTCCATCACTGCCGCTCATTAAGGATTGATGATAAGCCAGATGA
TATTGGAGGACGTGATATCCAAAAACAGGAAATTTGCGAGGCTGTAAAGT
TACCTCTCACACATCACAATTTATACAAGCAAATTGGTATTGATACTCCT
CGAGGTGTTTTACTATGCGGCCCCCTTGGAACTAGTAAAATAATGCTTGC
CAAAGCTGATGCTAATCATACCACTGCCGCCTTTATCAGGGTTATGGGCT
CTGAGTTTGTGCAGAAGTATCTTGGTGAGATATTGCAGCTGCAATTTAAC
TACATAAAGGAGTATCAAATGTTAGGGGGAAAGTACATTAAGTTGCTTCA
GAATGTTGATACTGCACAAACTTGTGAGATAGCATAA
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