XM_058928884.1

Transcript Overview
NameXM_058928884.1
Unique NamedrVicVill.AUMerit.1.0.rna-XM_058928884.1
TypemRNA
OrganismVicia villosa (vetch)
Sequence length822
References
External references for this mRNA
DatabaseAccession
GeneID131659732
GenBankXM_058928884.1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
LG3chromosomeLG3:201908935..201909619 -Vicia villosa cv. AU Merit genome v1.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjvvaL073Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvvaL0293Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvvaL348Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carvvaL355Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
anvvaL0648Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
psvvaL520Pisum sativum Cameor genome v1aPisum sativum
psvvaL546Pisum sativum Cameor genome v1aPisum sativum
carvvaL602Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
avjvvaL685Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvvaL1097Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
pvvvaL178Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvvaL545Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vasvvaL618Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvvaL679Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vfhvvaL224Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvvaL433Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vfhvvaL512Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vuvvaL016Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvvaL152Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvvaL620Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvvaL684Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vumvvaL753Vigna umbellata FF25 genome v1.0Vigna umbellata
vssvvaL738Vicia sativa cv. Studenica genome v1.0Vicia sativa
vumvvaL812Vigna umbellata FF25 genome v1.0Vigna umbellata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LOC131659732drVicVill.AUMerit.1.0.gene-LOC131659732Vicia villosagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
exon-XM_058928884.1-2drVicVill.AUMerit.1.0.exon-XM_058928884.1-2Vicia villosaexon
exon-XM_058928884.1-1drVicVill.AUMerit.1.0.exon-XM_058928884.1-1Vicia villosaexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
XP_058784867.1drVicVill.AUMerit.1.0.cds-XP_058784867.1_2Vicia villosaCDS
XP_058784867.1drVicVill.AUMerit.1.0.cds-XP_058784867.1Vicia villosaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVicVill.AUMerit.1.0.rna-XM_058928884.1drVicVill.AUMerit.1.0.rna-XM_058928884.1Vicia villosapolypeptide
drVicVill.AUMerit.1.0.rna-XM_058928884.1drVicVill.AUMerit.1.0.rna-XM_058928884.1-proteinVicia villosapolypeptide


Homology
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4X1Z5|A0A9D4X1Z5_PEA (SRR1-like domain-containing protein OS=Pisum sativum OX=3888 GN=KIW84_056113 PE=3 SV=1)

HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0
Identity = 259/278 (93.17%), Postives = 268/278 (96.40%), Query Frame = 0
Query:    1 MAASAKSLT-----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
            MAASAKSLT     TDGDWTVILPRRGRQRRKDTEVE+ISEEKQEPWAPTDSQKDPIRETALMQKMERYI+KIENSQFY TF+DQIETS+LDYFHIVLGSET MQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGC+VMSINEHGKREAVKPTMFFMPHCEAELY+NLLQANWKPSFLNNMVLFGNSFEEYE +VSLCKNSPVLNSVKHILAAR FTNEIKIEKIP+DYYNAFHDSSWH FSPVHE+ELQFINS
Sbjct:    1 MAASAKSLTNSNCTTDGDWTVILPRRGRQRRKDTEVERISEEKQEPWAPTDSQKDPIRETALMQKMERYISKIENSQFYHTFKDQIETSILDYFHIVLGSETNMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCTVMSINEHGKREAVKPTMFFMPHCEAELYSNLLQANWKPSFLNNMVLFGNSFEEYEQHVSLCKNSPVLNSVKHILAARRFTNEIKIEKIPDDYYNAFHDSSWHIFSPVHETELQFINS 278          
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|G7IYV5|G7IYV5_MEDTR (Putative sensitivity To Red Light Reduced-like, SRR1 OS=Medicago truncatula OX=3880 GN=11419761 PE=3 SV=1)

HSP 1 Score: 476.478 bits (1225), Expect = 1.924e-168
Identity = 230/278 (82.73%), Postives = 248/278 (89.21%), Query Frame = 0
Query:    1 MAASAKSLT-----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
            MA+SAK+LT     TD DWTV+LPRRGRQ+RK  EV KI EEKQEPWAPTDSQ DP RETALMQKMER+I+KIENSQFYQTFRDQ+ETSVLDY   VLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRD N IG+IEVFDPI+SVTES VLEALGCSVMSINEHGKREA+KPTMFFMPHCEAELY NLL+ANWKP+ L NMVLFGNSFE YE +VSLCK SPV+  V HILAARSFTNE+KIE + +DYYNAFHDSSWHFFSPVHE+ELQ INS
Sbjct:    1 MASSAKTLTNSNCTTDEDWTVVLPRRGRQKRKAPEV-KILEEKQEPWAPTDSQTDPGRETALMQKMERHISKIENSQFYQTFRDQVETSVLDYIPKVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDFNWIGSIEVFDPIISVTESHVLEALGCSVMSINEHGKREALKPTMFFMPHCEAELYCNLLRANWKPNLLKNMVLFGNSFEAYEQHVSLCKTSPVMYLVGHILAARSFTNEVKIETVSDDYYNAFHDSSWHFFSPVHETELQLINS 277          
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2Z3M5|A0A1S2Z3M5_CICAR (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cicer arietinum OX=3827 GN=LOC101514238 PE=3 SV=1)

HSP 1 Score: 471.855 bits (1213), Expect = 1.467e-166
Identity = 224/278 (80.58%), Postives = 243/278 (87.41%), Query Frame = 0
Query:    1 MAASAKSLT-----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
            MAASAK+LT     T GDWTV+LPRRG+QRRK  EV KI EEKQEPWAPTDSQ DP +ETALMQKMERYI +I NSQFY TFRDQI+TSV DYF  VLGS+T MQMVIYGIGSI+LYEPP LQLSIAMLMKRD N IG+IEVFDPILSVTESRVLE LGCSVMSINEHGKREA+KPTMFFMPHCEAELYNNLL+ANWKP+ L NMVLFGNSFE YE +VSLCKNSP+ NS+ +ILA RSF NE +IE I +DYYNAFHDSSWHFFS VHE+ELQFINS
Sbjct:    1 MAASAKTLTNTNCTTSGDWTVVLPRRGKQRRKVAEVGKILEEKQEPWAPTDSQTDPGKETALMQKMERYINRIGNSQFYHTFRDQIQTSVFDYFRTVLGSDTKMQMVIYGIGSIDLYEPPRLQLSIAMLMKRDFNWIGSIEVFDPILSVTESRVLETLGCSVMSINEHGKREALKPTMFFMPHCEAELYNNLLRANWKPNLLKNMVLFGNSFETYEQHVSLCKNSPIQNSLGYILAVRSFANEFRIETISDDYYNAFHDSSWHFFSAVHETELQFINS 278          
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3PNL0|A0A2K3PNL0_TRIPR (Protein sensitivity to red light reduced 1-like OS=Trifolium pratense OX=57577 GN=L195_g013589 PE=3 SV=1)

HSP 1 Score: 458.759 bits (1179), Expect = 1.882e-161
Identity = 220/278 (79.14%), Postives = 239/278 (85.97%), Query Frame = 0
Query:    1 MAASAKSLT-----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
            MAASAK+LT     TD DWTV+LPRRGRQ+RK TEV +I EEKQEPW PTDSQ DP RE  LMQKME YI+KI NSQFY TF DQI+TS LD FH VLGSET MQMVIYGIGSIELYEPPCLQLSIAMLMKRD N IGNIEVFDPILS TESRVLEALGC+VMSINEHGKREA+KPTMFFMPHCEAELY NLL+ANWK + L NMVLFGNSFE YE +++LCK + + NS+ HILAARSFT+E KIE I +DYY AFHDSSWHFFSPVHE+ELQFINS
Sbjct:    1 MAASAKTLTNSNCTTDEDWTVVLPRRGRQKRKITEVGRILEEKQEPWTPTDSQTDPSREAPLMQKMEDYISKIGNSQFYHTFSDQIQTSALDSFHKVLGSETKMQMVIYGIGSIELYEPPCLQLSIAMLMKRDFNWIGNIEVFDPILSATESRVLEALGCTVMSINEHGKREALKPTMFFMPHCEAELYINLLRANWKLNLLKNMVLFGNSFEAYEEHLALCKYTSIPNSIGHILAARSFTSEFKIETISDDYYKAFHDSSWHFFSPVHETELQFINS 278          
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6NRC7|A0A2Z6NRC7_TRISU (SRR1-like domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_118950 PE=3 SV=1)

HSP 1 Score: 458.759 bits (1179), Expect = 2.268e-161
Identity = 216/278 (77.70%), Postives = 239/278 (85.97%), Query Frame = 0
Query:    1 MAASAKSLT-----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
            MAASAK+ T     TD DWTV+LPRRGRQ+RK TE+  + EEKQEPW PTDSQ DP RE  LMQKME YI+KI NS FY TF DQI+TSVLDYFH VLGSET MQMVIYGIGSI+LYEPPCLQLSIAMLMKRD N IGNIEVFDP+LS TESRVLEALGC+VMSINEHGKREA+KPTMFFMPHCEAELY NLL+ANWKP+ L NMVLFGNSFE YE +++LCK + + NS+ HILAARSFT+E KIE I +DYY AFHDSSWHFF+PVHE+ELQFINS
Sbjct:    1 MAASAKTFTNSNCTTDEDWTVVLPRRGRQKRKITEIGSVLEEKQEPWTPTDSQTDPSREKTLMQKMEDYISKIGNSLFYHTFSDQIQTSVLDYFHKVLGSETKMQMVIYGIGSIQLYEPPCLQLSIAMLMKRDFNWIGNIEVFDPVLSATESRVLEALGCTVMSINEHGKREALKPTMFFMPHCEAELYINLLRANWKPNLLKNMVLFGNSFEAYEEHLALCKYTSIPNSIGHILAARSFTSEFKIETISDDYYKAFHDSSWHFFAPVHETELQFINS 278          
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A392N6X9|A0A392N6X9_9FABA (Protein SENSITIVITY TO RED LIGHT REDUCED 1-like OS=Trifolium medium OX=97028 GN=A2U01_0015875 PE=3 SV=1)

HSP 1 Score: 457.603 bits (1176), Expect = 5.757e-161
Identity = 220/278 (79.14%), Postives = 240/278 (86.33%), Query Frame = 0
Query:    1 MAASAKSLT-----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
            MAASAK+LT     TD DWTV+LPR GRQ+RK TEV +I EEKQEPW PTDSQ DP RETALMQKME YI+KI NSQFY TF DQI+TS LD FH VLGSET MQMVIYGIGSIELYEPP LQLSIAMLMKRD N IGNIEVFDPILS TESRVLEALGC+VMSINEHGKREA+KPTMFFMPHCEAELY NLL+ANWKP+ L NMVLFGNSFE YE +++LCK + + NS+ HILAARSFT+E KIE I +DYY AFHDSSWHFF+PVHE+ELQFINS
Sbjct:    1 MAASAKTLTNSNCTTDEDWTVVLPRCGRQKRKITEVGRILEEKQEPWTPTDSQTDPSRETALMQKMEDYISKIGNSQFYHTFSDQIQTSALDSFHKVLGSETKMQMVIYGIGSIELYEPPRLQLSIAMLMKRDFNWIGNIEVFDPILSATESRVLEALGCTVMSINEHGKREALKPTMFFMPHCEAELYINLLRANWKPNLLKNMVLFGNSFEAYEEHLALCKYTSIPNSIGHILAARSFTSEFKIETISDDYYKAFHDSSWHFFTPVHETELQFINS 278          
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LJ14|A0A8B8LJ14_ABRPR (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Abrus precatorius OX=3816 GN=LOC113865570 PE=3 SV=1)

HSP 1 Score: 452.595 bits (1163), Expect = 5.483e-159
Identity = 212/278 (76.26%), Postives = 239/278 (85.97%), Query Frame = 0
Query:    1 MAASAKSLTTD-----GDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
            MAAS KSLT D     GDWTV+LPRRGRQRRK T+V  I EEKQE W PTDSQ DPIRET LMQKME+ I KI +S+FY TFRDQIETSVLDYFH VLGSE  M M+IYGIGSIELYEPPCLQLS+A+LMKRD + IGNIEVFDPILSV+ESRVLEALGC V+SINEHG+REA+KPTMFFMPHCEAELYNNLL ANWKP  L+N V+FGNSFE YE ++S+CKNSP++NS +HILA R FT+E +I+ + +DYYNAFHDSSWHFF PVHE+ELQFINS
Sbjct:    1 MAASTKSLTVDSCTSNGDWTVVLPRRGRQRRKATKV-GILEEKQEAWTPTDSQTDPIRETKLMQKMEKCIAKIGSSKFYHTFRDQIETSVLDYFHRVLGSEIKMPMIIYGIGSIELYEPPCLQLSLAILMKRDFSWIGNIEVFDPILSVSESRVLEALGCCVISINEHGRREAIKPTMFFMPHCEAELYNNLLHANWKPELLSNTVIFGNSFETYEQHLSICKNSPIINSTEHILAVRRFTSEFRIKTVSDDYYNAFHDSSWHFFGPVHEAELQFINS 277          
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A4QTK8|A0A6A4QTK8_LUPAL (Putative sensitivity To Red Light Reduced-like, SRR1 OS=Lupinus albus OX=3870 GN=Lalb_Chr03g0032801 PE=3 SV=1)

HSP 1 Score: 435.261 bits (1118), Expect = 4.464e-152
Identity = 213/278 (76.62%), Postives = 236/278 (84.89%), Query Frame = 0
Query:    1 MAASAKSLTTDG-----DWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
            MAASAK+LT +      +WTV+LPRRGR+ RK T+VE I EEKQEPWAPTDSQ DP RET +  KMER I KI  SQFY TFRDQIETSV D+ H VLGSET MQMV+YGIGSIELYEPPCLQLS+A+LMKRD + I NIEVFDPILSVTE+RVLEA GCSV+SINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKP  L+NMVL GNSFEEYE + SLCKNSPVLNS++HILA R FT+EIKI+KI +DYYNAFHDSSWHFFSP H+ +L  I S
Sbjct:    1 MAASAKTLTINNCTSKEEWTVVLPRRGRKGRKATKVE-ILEEKQEPWAPTDSQIDPSRETKVKGKMERCIDKIRASQFYHTFRDQIETSVFDHIHRVLGSETKMQMVMYGIGSIELYEPPCLQLSLAILMKRDFSWIENIEVFDPILSVTETRVLEAFGCSVISINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPKPLSNMVLLGNSFEEYEEHASLCKNSPVLNSMEHILAIRRFTHEIKIQKISDDYYNAFHDSSWHFFSPDHDIDLPCIKS 277          
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|K7KTW1|K7KTW1_SOYBN (SRR1-like domain-containing protein OS=Glycine max OX=3847 GN=100812408 PE=3 SV=1)

HSP 1 Score: 432.18 bits (1110), Expect = 6.666e-151
Identity = 206/277 (74.37%), Postives = 236/277 (85.20%), Query Frame = 0
Query:    1 MAASAKSLT----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
            MAAS K+LT    T+  WTV+LPRR RQRRK T+   + EEKQEPW PTDSQ DP +E  L+QKMER I +IE S+FY TFRDQI+TSV+DYF+ VLGSE  MQMVIYGIGSI+LYEPP LQLS+A+LM+RDL+ IGNIEVFDPILS TESRVLEALGCSVMSINEHG+REA+KPTMFFMPHCEAELYNNLLQANWK + L NMVLFGNSFE YE +VSLCKNSP+LNS+ HILAA+ FTNE +I+ + +DYYNAFHDSSWHFFSP+ E+EL  INS
Sbjct:    1 MAASEKTLTNKCTTNEGWTVVLPRRSRQRRKATK-SGVLEEKQEPWTPTDSQTDPSKEATLVQKMERCINRIEGSEFYHTFRDQIQTSVVDYFNRVLGSEIKMQMVIYGIGSIKLYEPPRLQLSLAILMRRDLSWIGNIEVFDPILSATESRVLEALGCSVMSINEHGRREALKPTMFFMPHCEAELYNNLLQANWKLNLLKNMVLFGNSFETYEQHVSLCKNSPILNSMGHILAAQGFTNEFRIQTVSDDYYNAFHDSSWHFFSPLLETELPIINS 276          
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2QAA2|A0A0B2QAA2_GLYSO (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Glycine soja OX=3848 GN=D0Y65_014101 PE=3 SV=1)

HSP 1 Score: 432.18 bits (1110), Expect = 6.666e-151
Identity = 206/277 (74.37%), Postives = 236/277 (85.20%), Query Frame = 0
Query:    1 MAASAKSLT----TDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESELQFINS 273
            MAAS K+LT    T+  WTV+LPRR RQRRK T+   + EEKQEPW PTDSQ DP +E  L+QKMER I +IE S+FY TFRDQI+TSV+DYF+ VLGSE  MQMVIYGIGSI+LYEPP LQLS+A+LM+RDL+ IGNIEVFDPILS TESRVLEALGCSVMSINEHG+REA+KPTMFFMPHCEAELYNNLLQANWK + L NMVLFGNSFE YE +VSLCKNSP+LNS+ HILAA+ FTNE +I+ + +DYYNAFHDSSWHFFSP+ E+EL  INS
Sbjct:    1 MAASEKTLTNKCTTNEGWTVVLPRRSRQRRKATK-SGVLEEKQEPWTPTDSQTDPSKEATLVQKMERCINRIEGSEFYHTFRDQIQTSVVDYFNRVLGSEIKMQMVIYGIGSIKLYEPPRLQLSLAILMRRDLSWIGNIEVFDPILSATESRVLEALGCSVMSINEHGRREALKPTMFFMPHCEAELYNNLLQANWKLNLLKNMVLFGNSFETYEQHVSLCKNSPILNSMGHILAAQGFTNEFRIQTVSDDYYNAFHDSSWHFFSPLLETELPIINS 276          
BLAST of XM_058928884.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8GWZ6|SRR1_ARATH (Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arabidopsis thaliana OX=3702 GN=SRR1 PE=2 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 3.087e-99
Identity = 145/271 (53.51%), Postives = 197/271 (72.69%), Query Frame = 0
Query:    1 MAASAKSLTTDGDWTVILPRRGRQ-RRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIET-SVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIG-NIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESEL 268
            M  + K+ ++DG+W V+LP +GRQ RR+  + +  +EE+++PW   D + DP R+  L QKME  + KIE+S FY  F +Q+++  V +   +VLGSET +QMV+YGIGSIE YE P  QLSIA+LMKR+ + +G NIEVFDP+LS TES  LE+LGCSV+S+NE  +REA+KPT+FFMPHCEA LY+NLLQANW+   L+ + LFGNSF+ YE  VS   ++ V+ + K I+AA+  T+E  IE   +DY+ AFHDSSWHFFS   +SEL
Sbjct:    1 METTVKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEISLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIAILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEANLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVSF--DAEVICATKRIIAAQRVTSEFAIETESDDYFAAFHDSSWHFFSSGIDSEL 269          
BLAST of XM_058928884.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8K2M3|SRR1L_MOUSE (SRR1-like protein OS=Mus musculus OX=10090 GN=Srrd PE=2 SV=4)

HSP 1 Score: 87.4261 bits (215), Expect = 3.027e-19
Identity = 52/146 (35.62%), Postives = 79/146 (54.11%), Query Frame = 0
Query:   95 SETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLI-GNIEVFDPILSVTESRVLEALGCSVMSINEHGKREA-VKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVS---LCKNSPVLNSVKHILAARSF 235
            S + ++ V YG+G+        +QL+  +L      +   +  V+DP+ S TE  VL +LG +V+S NE GKR    +PT+F+MPHC   LYNNLL +NW    L+ +++ GNSF   E  +    L +N P +  V   +A   F
Sbjct:  104 SASHVKCVCYGLGTFASCPTARIQLAFMLLFLEKCQVPRSHCWVYDPLFSQTEVSVLTSLGVTVLSENEEGKRSVQGQPTVFYMPHCGTALYNNLLWSNWSADALSRVLIIGNSFRGLEERLLARILQENYPYIAKVSDRIAGPGF 249          
BLAST of XM_058928884.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9UH36|SRR1L_HUMAN (SRR1-like protein OS=Homo sapiens OX=9606 GN=SRRD PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 7.662e-18
Identity = 62/182 (34.07%), Postives = 91/182 (50.00%), Query Frame = 0
Query:   91 IVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLI-GNIEVFDPILSVTESRVLEALGCSVMSINEHGKREA-VKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYV---SLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESE 267
            I++     ++ V YGIG+         QL+  +L+     +   +  V+DP+ S  E  VL  LG +V+S NE GKR    +PT+F+M HC   LYNNLL +NW    L+ MV+ GNSF+  E  +    L KN P +  +   L    F            Y + F+D+S H+F PV + E
Sbjct:  131 ILVTGTCHLKCVCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYDPLFSQLEIEVLNTLGVTVLSENEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALSKMVIIGNSFKGLEERLLARILQKNYPYIAKILKGLEELEFPQ-------TSQYMDIFNDTSVHWF-PVQKLE 304          
BLAST of XM_058928884.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9VEB5|SRR1L_DROME (SRR1-like protein OS=Drosophila melanogaster OX=7227 GN=CG7988 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.344e-11
Identity = 41/123 (33.33%), Postives = 61/123 (49.59%), Query Frame = 0
Query:  138 FDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFF 260
            FDP+   +E  ++      +MS +  GK EA  PT++++PHC   L +N+L +NWK   L N+ L  NSFE       +   +P  N   HI        E  +E   E ++N F+D S H F
Sbjct:  120 FDPVFRDSEKELIRLFDGCIMSKDCAGKHEATVPTLYYLPHCPYALMHNILWSNWKRETLPNVFLISNSFE-------MLTMTP-RNQDDHITRIVEHCTETPLEDDYE-HHNVFNDLSLHTF 233          
BLAST of XM_058928884.1 vs. Araport11
Match: | (Symbols: SRR1 | SENSITIVITY TO RED LIGHT REDUCED 1 | chr5:24000747-24001574 REVERSE LENGTH=275)

HSP 1 Score: 294.664 bits (753), Expect = 3.226e-100
Identity = 145/271 (53.51%), Postives = 197/271 (72.69%), Query Frame = 0
Query:    1 MAASAKSLTTDGDWTVILPRRGRQ-RRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIET-SVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIG-NIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESEL 268
            M  + K+ ++DG+W V+LP +GRQ RR+  + +  +EE+++PW   D + DP R+  L QKME  + KIE+S FY  F +Q+++  V +   +VLGSET +QMV+YGIGSIE YE P  QLSIA+LMKR+ + +G NIEVFDP+LS TES  LE+LGCSV+S+NE  +REA+KPT+FFMPHCEA LY+NLLQANW+   L+ + LFGNSF+ YE  VS   ++ V+ + K I+AA+  T+E  IE   +DY+ AFHDSSWHFFS   +SEL
Sbjct:    1 METTVKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEISLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIAILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEANLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVSF--DAEVICATKRIIAAQRVTSEFAIETESDDYFAAFHDSSWHFFSSGIDSEL 269          
BLAST of XM_058928884.1 vs. Araport11
Match: | (Symbols: SRR1 | SENSITIVITY TO RED LIGHT REDUCED 1 | chr5:24000747-24001574 REVERSE LENGTH=275)

HSP 1 Score: 294.664 bits (753), Expect = 3.226e-100
Identity = 145/271 (53.51%), Postives = 197/271 (72.69%), Query Frame = 0
Query:    1 MAASAKSLTTDGDWTVILPRRGRQ-RRKDTEVEKISEEKQEPWAPTDSQKDPIRETALMQKMERYITKIENSQFYQTFRDQIET-SVLDYFHIVLGSETTMQMVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIG-NIEVFDPILSVTESRVLEALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNMVLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYNAFHDSSWHFFSPVHESEL 268
            M  + K+ ++DG+W V+LP +GRQ RR+  + +  +EE+++PW   D + DP R+  L QKME  + KIE+S FY  F +Q+++  V +   +VLGSET +QMV+YGIGSIE YE P  QLSIA+LMKR+ + +G NIEVFDP+LS TES  LE+LGCSV+S+NE  +REA+KPT+FFMPHCEA LY+NLLQANW+   L+ + LFGNSF+ YE  VS   ++ V+ + K I+AA+  T+E  IE   +DY+ AFHDSSWHFFS   +SEL
Sbjct:    1 METTVKNSSSDGEWKVVLPSKGRQGRRRKPKPKGQAEEEEQPWKSDDLEIDPQRQARLKQKMEISLKKIESSSFYTAFLEQLKSPEVSNQIRLVLGSETQLQMVMYGIGSIESYESPRFQLSIAILMKREFDWVGDNIEVFDPVLSATESSYLESLGCSVLSVNEQARREALKPTLFFMPHCEANLYSNLLQANWRMDRLSKIALFGNSFQMYEEQVSF--DAEVICATKRIIAAQRVTSEFAIETESDDYFAAFHDSSWHFFSSGIDSEL 269          
The following BLAST results are available for this feature:
BLAST of XM_058928884.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A9D4X1Z5|A0A9D4X1Z5_PEA0.000e+093.17SRR1-like domain-containing protein OS=Pisum sativ... [more]
tr|G7IYV5|G7IYV5_MEDTR1.924e-16882.73Putative sensitivity To Red Light Reduced-like, SR... [more]
tr|A0A1S2Z3M5|A0A1S2Z3M5_CICAR1.467e-16680.58Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Cice... [more]
tr|A0A2K3PNL0|A0A2K3PNL0_TRIPR1.882e-16179.14Protein sensitivity to red light reduced 1-like OS... [more]
tr|A0A2Z6NRC7|A0A2Z6NRC7_TRISU2.268e-16177.70SRR1-like domain-containing protein OS=Trifolium s... [more]
tr|A0A392N6X9|A0A392N6X9_9FABA5.757e-16179.14Protein SENSITIVITY TO RED LIGHT REDUCED 1-like OS... [more]
tr|A0A8B8LJ14|A0A8B8LJ14_ABRPR5.483e-15976.26Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Abru... [more]
tr|A0A6A4QTK8|A0A6A4QTK8_LUPAL4.464e-15276.62Putative sensitivity To Red Light Reduced-like, SR... [more]
tr|K7KTW1|K7KTW1_SOYBN6.666e-15174.37SRR1-like domain-containing protein OS=Glycine max... [more]
tr|A0A0B2QAA2|A0A0B2QAA2_GLYSO6.666e-15174.37Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Glyc... [more]
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BLAST of XM_058928884.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs UniProt Swissprot)
Total hits: 4
Match NameE-valueIdentityDescription
sp|Q8GWZ6|SRR1_ARATH3.087e-9953.51Protein SENSITIVITY TO RED LIGHT REDUCED 1 OS=Arab... [more]
sp|Q8K2M3|SRR1L_MOUSE3.027e-1935.62SRR1-like protein OS=Mus musculus OX=10090 GN=Srrd... [more]
sp|Q9UH36|SRR1L_HUMAN7.662e-1834.07SRR1-like protein OS=Homo sapiens OX=9606 GN=SRRD ... [more]
sp|Q9VEB5|SRR1L_DROME1.344e-1133.33SRR1-like protein OS=Drosophila melanogaster OX=72... [more]
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BLAST of XM_058928884.1 vs. Araport11
Analysis Date: 2024-08-12 (Blastp of Vicia villosa cv. AU Merit v1.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|3.226e-10053.51Symbols: SRR1 | SENSITIVITY TO RED LIGHT REDUCED 1... [more]
|3.226e-10053.51Symbols: SRR1 | SENSITIVITY TO RED LIGHT REDUCED 1... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vicia villosa cv. AU Merit genome v1.0
Date Performed: 2024-08-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012942SRR1-like domainPFAMPF07985SRR1coord: 94..259
e-value: 1.3E-37
score: 140.8
IPR040044SRR1-like proteinPANTHERPTHR28626SRR1-LIKE PROTEINcoord: 4..265

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVicVill.AUMerit.1.0.rna-XM_058928884.1 ID=drVicVill.AUMerit.1.0.rna-XM_058928884.1; Name=XM_058928884.1; organism=Vicia villosa; type=mRNA; length=822bp
ATGGCAGCTTCAGCGAAATCTCTCACAACAGATGGAGACTGGACGGTTAT
TTTACCCCGTCGTGGAAGACAAAGGAGAAAAGATACTGAAGTTGAAAAAA
TTTCGGAAGAAAAACAAGAACCATGGGCTCCAACAGATTCTCAGAAAGAT
CCAATCAGAGAAACAGCATTAATGCAGAAAATGGAAAGATATATTACCAA
GATCGAGAACTCTCAGTTCTATCAGACTTTCAGAGATCAGATTGAAACAT
CAGTTTTAGATTATTTCCATATAGTTTTGGGCTCAGAGACAACTATGCAA
ATGGTCATTTATGGTATTGGCAGCATTGAATTGTATGAGCCGCCATGTTT
GCAACTTAGCATTGCAATGTTGATGAAAAGAGACTTAAATTTGATTGGAA
ACATCGAGGTATTTGATCCTATTCTCTCTGTAACCGAGTCTCGGGTTTTG
GAAGCTCTTGGTTGTTCTGTCATGTCCATAAACGAGCATGGGAAGCGAGA
AGCTGTGAAGCCAACAATGTTCTTCATGCCTCACTGTGAAGCAGAGTTAT
ATAACAACCTGTTGCAGGCAAATTGGAAACCGAGTTTCTTAAATAACATG
GTATTGTTCGGGAATAGCTTTGAAGAATACGAGCATTATGTGTCATTATG
TAAGAACTCACCCGTTCTGAACTCAGTAAAACATATCTTGGCTGCCCGAA
GTTTTACGAACGAAATCAAAATTGAAAAAATTCCTGAAGATTATTATAAT
GCATTCCATGATTCAAGTTGGCATTTTTTCAGCCCTGTCCATGAATCGGA
GCTGCAATTTATCAATTCTTGA
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protein sequence of drVicVill.AUMerit.1.0.rna-XM_058928884.1

>drVicVill.AUMerit.1.0.rna-XM_058928884.1 ID=drVicVill.AUMerit.1.0.rna-XM_058928884.1; Name=drVicVill.AUMerit.1.0.rna-XM_058928884.1; organism=Vicia villosa; type=polypeptide; length=273bp
MAASAKSLTTDGDWTVILPRRGRQRRKDTEVEKISEEKQEPWAPTDSQKD
PIRETALMQKMERYITKIENSQFYQTFRDQIETSVLDYFHIVLGSETTMQ
MVIYGIGSIELYEPPCLQLSIAMLMKRDLNLIGNIEVFDPILSVTESRVL
EALGCSVMSINEHGKREAVKPTMFFMPHCEAELYNNLLQANWKPSFLNNM
VLFGNSFEEYEHYVSLCKNSPVLNSVKHILAARSFTNEIKIEKIPEDYYN
AFHDSSWHFFSPVHESELQFINS
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mRNA from alignment at LG3:201908935..201909619-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVicVill.AUMerit.1.0.rna-XM_058928884.1 ID=drVicVill.AUMerit.1.0.rna-XM_058928884.1; Name=XM_058928884.1; organism=Vicia villosa; type=mRNA; length=685bp; location=Sequence derived from: LG3:201908935..201909619- (Vicia villosa
ATGGAGATTCCAATAGTAAATACTTTCATAGAGTAATGAAGGAGAGGAGG AGAAGGAACCACATTAGTTCTATCGTCACTAGTTAGGGGTTCTAAATTCG GTTAAGGAAGTGAAAGAAGCGGTAAAGGTGAATTTCGAGGACAAAGTTAT TGAGTCTAATTTGGTTAGATCTTCTTTAGATGGTCTTGATTTTATCTCTT TGAGTTTGGAAGATAGTATTTCTCTTGAGGCTCCTTTTTCGGAAGAGGAA ATTAAGGAAGCGGTGTGGAGTTGTGATTTCATTGGTATGTCTCTTCTTTT TATTAAAAGATATTGGTATTTCAATGGTAAGGATATTGTTGCTTGTTTTA GAGATTTTCATGTCGGAGCGGTATTATCTAAATCTATTACGTCTTATTTT CTTTCTCTAATCTCAAAGGTCTCTAATCCTTTGGGTTTGGATGATAATCG TCCTATTTGCTTGGTGGGGAGTATTTATAAAATCATCTCTAAATTGCTGG CTAGTAGGATTAAGAAAGTATTGTCGTCGGTCATCTCTAATTGTAAAAGT GATTTTGTCTCGGGTAGGCAAATGATTGATAGTGTTCTAGTGGTAAATGA AATAGTGGATTACGCTTCTAAGGAAGGAAAGGAATGTCTTATGTTCAAAG GAGATTTTGAAAAAGTATATGATAAAGTTATTTGA
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Coding sequence (CDS) from alignment at LG3:201908935..201909619-

>drVicVill.AUMerit.1.0.rna-XM_058928884.1 ID=drVicVill.AUMerit.1.0.rna-XM_058928884.1; Name=XM_058928884.1; organism=Vicia villosa; type=CDS; length=594bp; location=Sequence derived from: LG3:201908935..201909619- (Vicia villosa
ATGGAGATTCCAATAGAAGTGAAAGAAGCGGTAAAGGTGAATTTCGAGGA
CAAAGTTATTGAGTCTAATTTGGTTAGATCTTCTTTAGATGGTCTTGATT
TTATCTCTTTGAGTTTGGAAGATAGTATTTCTCTTGAGGCTCCTTTTTCG
GAAGAGGAAATTAAGGAAGCGGTGTGGAGTTGTGATTTCATTGGTATGTC
TCTTCTTTTTATTAAAAGATATTGGTATTTCAATGGTAAGGATATTGTTG
CTTGTTTTAGAGATTTTCATGTCGGAGCGGTATTATCTAAATCTATTACG
TCTTATTTTCTTTCTCTAATCTCAAAGGTCTCTAATCCTTTGGGTTTGGA
TGATAATCGTCCTATTTGCTTGGTGGGGAGTATTTATAAAATCATCTCTA
AATTGCTGGCTAGTAGGATTAAGAAAGTATTGTCGTCGGTCATCTCTAAT
TGTAAAAGTGATTTTGTCTCGGGTAGGCAAATGATTGATAGTGTTCTAGT
GGTAAATGAAATAGTGGATTACGCTTCTAAGGAAGGAAAGGAATGTCTTA
TGTTCAAAGGAGATTTTGAAAAAGTATATGATAAAGTTATTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR012942SRR1-like
IPR040044SRR1L