Vigst.02G125700.01

Transcript Overview
NameVigst.02G125700.01
Unique NamedrVigStip.JP252948.2.0.Vigst.02G125700.01
TypemRNA
OrganismVigna stipulacea ()
Sequence length582
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr02chromosomeChr02:14324160..14325230 -Vigna stipulacea acc. JP252948 genome v2.a1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vstvvaR284Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR355Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstL0159Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0423Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0686Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvstL502Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvstL0835Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjvstL637Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anvstL1318Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvstL146Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvstL150Pisum sativum Cameor genome v1aPisum sativum
psvstL449Pisum sativum Cameor genome v1aPisum sativum
carvstL431Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pvvstL754Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvstL874Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vfhvstL047Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vstvstR158Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vfhvstL246Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvstL452Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vstvuR234Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vssvstL371Vicia sativa cv. Studenica genome v1.0Vicia sativa
vstvuR247Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvumR225Vigna umbellata FF25 genome v1.0Vigna umbellata
vstvumR236Vigna umbellata FF25 genome v1.0Vigna umbellata
vstvumR245Vigna umbellata FF25 genome v1.0Vigna umbellata
vssvstL551Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvstL232Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvstL288Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigst.02G125700drVigStip.JP252948.2.0.Vigst.02G125700Vigna stipulaceagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
nbis-exon-31224drVigStip.JP252948.2.0.nbis-exon-31224Vigna stipulaceaexon
nbis-exon-31225drVigStip.JP252948.2.0.nbis-exon-31225Vigna stipulaceaexon
nbis-exon-31226drVigStip.JP252948.2.0.nbis-exon-31226Vigna stipulaceaexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
three_prime_utr-4599drVigStip.JP252948.2.0.three_prime_utr-4599Vigna stipulaceathree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-30165drVigStip.JP252948.2.0.cds-30165Vigna stipulaceaCDS
cds-30164drVigStip.JP252948.2.0.cds-30164Vigna stipulaceaCDS
cds-30163drVigStip.JP252948.2.0.cds-30163Vigna stipulaceaCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
five_prime_utr-4854drVigStip.JP252948.2.0.five_prime_utr-4854Vigna stipulaceafive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigStip.JP252948.2.0.Vigst.02G125700.01drVigStip.JP252948.2.0.Vigst.02G125700.01Vigna stipulaceapolypeptide
drVigStip.JP252948.2.0.Vigst.02G125700.01drVigStip.JP252948.2.0.Vigst.02G125700.01-proteinVigna stipulaceapolypeptide


Homology
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3T858|A0A0S3T858_PHAAN (Large ribosomal subunit protein uL6 alpha-beta domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.11G068400 PE=3 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 1.026e-136
Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTI+VDE
Sbjct:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTILVDE 193
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9VN78|A0A0L9VN78_PHAAN (60S ribosomal protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0150410 PE=3 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 1.026e-136
Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTI+VDE
Sbjct:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTILVDE 193
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3UB10|A0A1S3UB10_VIGRR (60S ribosomal protein L9 OS=Vigna radiata var. radiata OX=3916 GN=LOC106763543 PE=3 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 2.911e-136
Identity = 191/193 (98.96%), Postives = 193/193 (100.00%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTI+V+E
Sbjct:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTILVEE 193
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UE15|A0A0L9UE15_PHAAN (60S ribosomal protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0105680 PE=3 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 3.143e-136
Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASI NDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTI+VDE
Sbjct:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIGNDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIIVDE 193
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6NRY6|A0A4D6NRY6_VIGUN (Large subunit ribosomal protein L9e OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g2455 PE=3 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 3.248e-136
Identity = 191/193 (98.96%), Postives = 193/193 (100.00%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKI+AWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVV+E
Sbjct:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIEAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVEE 193
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RE32|A0A0S3RE32_PHAAN (Large ribosomal subunit protein uL6 alpha-beta domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G171400 PE=3 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 2.948e-135
Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETMNIPDGVS+KVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASI NDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTI+V+E
Sbjct:    1 MKTILSSETMNIPDGVSVKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIGNDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTILVEE 193
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UEK9|A0A0L9UEK9_PHAAN (60S ribosomal protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0105720 PE=3 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 2.948e-135
Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETMNIPDGVS+KVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASI NDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTI+V+E
Sbjct:    1 MKTILSSETMNIPDGVSVKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIGNDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTILVEE 193
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy TrEMBL (2024)
Match: tr|V5NAN5|V5NAN5_PHAVU (60S ribosomal protein L9 OS=Phaseolus vulgaris OX=3885 PE=2 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 3.965e-135
Identity = 189/193 (97.93%), Postives = 192/193 (99.48%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENG+KKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIAN+NKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKG IVV+E
Sbjct:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGQKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANNNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGAIVVEE 193
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy TrEMBL (2024)
Match: tr|V7ART1|V7ART1_PHAVU (Large ribosomal subunit protein uL6 alpha-beta domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G039400g PE=3 SV=1)

HSP 1 Score: 383.645 bits (984), Expect = 2.533e-134
Identity = 188/193 (97.41%), Postives = 192/193 (99.48%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITD+NG+KKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIAN+NKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKG IVV+E
Sbjct:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDDNGQKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANNNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGAIVVEE 193
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6M1F2|A0A4D6M1F2_VIGUN (Large subunit ribosomal protein L9e OS=Vigna unguiculata OX=3917 GN=DEO72_LG5g1950 PE=3 SV=1)

HSP 1 Score: 382.874 bits (982), Expect = 3.928e-134
Identity = 187/193 (96.89%), Postives = 193/193 (100.00%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKI+AWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIAND+KSIEIRNFLGEKKVRKVDML+GVSVVRSEKVKDEL+LDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTI+V+E
Sbjct:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIEAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDSKSIEIRNFLGEKKVRKVDMLDGVSVVRSEKVKDELILDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTILVEE 193
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|P30707|RL9_PEA (Large ribosomal subunit protein uL6 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1)

HSP 1 Score: 364.385 bits (934), Expect = 2.209e-129
Identity = 177/193 (91.71%), Postives = 188/193 (97.41%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETMNIPDGV+IKV+AKVIEVEGPRGKLVRDFKHLNLDF LITDENGKKKLKIDAWFGSRKTSAAIRTALSHV+NLITGVTKG+RYKMRFVYA FPINASI NDNKSIEIRNFLGEKKVRKVD+L+GVS++RSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLDGIYVSEKG +VV+E
Sbjct:    1 MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFLGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGAVVVEE 193
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|P49209|RL91_ARATH (Large ribosomal subunit protein uL6z/uL6y OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3)

HSP 1 Score: 345.51 bits (885), Expect = 7.785e-122
Identity = 169/194 (87.11%), Postives = 183/194 (94.33%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITD-ENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETM+IPD V+IKVHAKVIEVEGPRGKLVRDFKHLNLDFQLI D E GKKKLKID+WFG+RKTSA+IRTALSHVDNLI+GVT+G+RYKMRFVYAHFPINASI  D KSIEIRNFLGEKKVRKV+ML+GV++VRSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLDGIYVSEK  IV +E
Sbjct:    1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEEE 194
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SZX9|RL92_ARATH (Large ribosomal subunit protein uL6x OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 1.004e-118
Identity = 163/194 (84.02%), Postives = 182/194 (93.81%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDE-NGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILSSETM+IPDGV+IKV+AKVIEVEGPRGKL RDFKHLNLDFQLI D+  GK++LKID+WFGSRKTSA+IRTALSHVDNLI GVT+G+ Y+MRFVYAHFPINASI  +NKSIEIRNFLGEKKVRKV+ML+GV +VRSEKVKDE++L+GNDIELVSRSCALINQKCHVK KDIRKFLDGIYVSEKG I V+E
Sbjct:    1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGKIAVEE 194
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|P49210|RL9_ORYSJ (Large ribosomal subunit protein uL6 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 SV=3)

HSP 1 Score: 328.561 bits (841), Expect = 2.762e-115
Identity = 156/192 (81.25%), Postives = 175/192 (91.15%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVD 192
            MKTIL+SETM IP+GV+++V AKV+ VEGPRGKL R+FKHLNLDFQL+    G +KL++DAWFG+R+T AAIRTA+SHV NLITGVTKGYRYKMRFVYAHFPINASI N N +IEIRNFLGEKKVRKVDMLEGV+++RSEKVKDELVLDGNDIELVSRS ALINQKCHVKNKDIRKFLDGIYVS+KGTI  D
Sbjct:    1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL---EGGRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q90YW0|RL9_ICTPU (Large ribosomal subunit protein uL6 OS=Ictalurus punctatus OX=7998 GN=rpl9 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 3.652e-76
Identity = 113/193 (58.55%), Postives = 142/193 (73.58%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE 193
            MKTILS++T++IPD V + +  + + V+GPRG L R+F H+NL+ +L+  +  +KKL++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I      +EIRNFLGEK +R+V M  GV+   S   KDELVL+GNDIELVS S ALI Q   VKNKDIRKFLDGIYVSEKGT+V  E
Sbjct:    1 MKTILSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKK--QKKLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVEPE 191
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|G1SWI6|RL9_RABIT (Large ribosomal subunit protein uL6 OS=Oryctolagus cuniculus OX=9986 GN=RPL9 PE=1 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 3.184e-75
Identity = 111/189 (58.73%), Postives = 141/189 (74.60%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTI 189
            MKTILS++T++IP+ V I +  + + V+GPRG L RDF H+N++  L+  +  KK+L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  +   +EIRNFLGEK +R+V M  GV+   S+  KDELVL+GNDIELVS S ALI Q   VKNKDIRKFLDGIYVSEKGT+
Sbjct:    1 MKTILSNQTVDIPENVDISLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK--KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5IFJ7|RL9_MACFA (Large ribosomal subunit protein uL6 OS=Macaca fascicularis OX=9541 GN=RPL9 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 3.591e-75
Identity = 111/189 (58.73%), Postives = 141/189 (74.60%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTI 189
            MKTILS++T++IP+ V I +  + + V+GPRG L RDF H+N++  L+  +  KK+L++D W+G+RK  A IRT  SHV N+I GVT G+RYKMR VYAHFPIN  I  +   +EIRNFLGEK +R+V M  GV+   S+  KDEL+L+GNDIELVS S ALI Q   VKNKDIRKFLDGIYVSEKGT+
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK--KKRLRVDKWWGNRKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|P51410|RL9_MOUSE (Large ribosomal subunit protein uL6 OS=Mus musculus OX=10090 GN=Rpl9 PE=1 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 4.568e-75
Identity = 110/189 (58.20%), Postives = 141/189 (74.60%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTI 189
            MKTILS++T++IP+ V I +  + + V+GPRG L RDF H+N++  L+  +  KK+L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  +   +EIRNFLGEK +R+V M  GV+   S+  KDEL+L+GNDIELVS S ALI Q   VKNKDIRKFLDGIYVSEKGT+
Sbjct:    1 MKTILSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK--KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q3SYR7|RL9_BOVIN (Large ribosomal subunit protein uL6 OS=Bos taurus OX=9913 GN=RPL9 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 6.553e-75
Identity = 110/189 (58.20%), Postives = 141/189 (74.60%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTI 189
            MKTILS++T++IP+ V I +  + + V+GPRG L RDF H+N++  L+  +  KK+L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  +   +EIRNFLGEK +R+V M  GV+   S+  KDEL+L+GNDIELVS S ALI Q   VKNKDIRKFLDGIYVSEKGT+
Sbjct:    1 MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK--KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
[Close]
BLAST of Vigst.02G125700.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|P32969|RL9_HUMAN (Large ribosomal subunit protein uL6 OS=Homo sapiens OX=9606 GN=RPL9 PE=1 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 6.997e-75
Identity = 110/189 (58.20%), Postives = 141/189 (74.60%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTI 189
            MKTILS++T++IP+ V I +  + + V+GPRG L RDF H+N++  L+  +  KK+L++D W+G+RK  A +RT  SHV N+I GVT G+RYKMR VYAHFPIN  I  +   +EIRNFLGEK +R+V M  GV+   S+  KDEL+L+GNDIELVS S ALI Q   VKNKDIRKFLDGIYVSEKGT+
Sbjct:    1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKK--KKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
[Close]
BLAST of Vigst.02G125700.01 vs. Araport11
Match: | (Symbols: PGY2 | PIGGYBACK2 | chr1:12023360-12024502 FORWARD LENGTH=194)

HSP 1 Score: 345.895 bits (886), Expect = 5.930e-123
Identity = 170/195 (87.18%), Postives = 184/195 (94.36%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITD-ENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE* 194
            MKTILSSETM+IPD V+IKVHAKVIEVEGPRGKLVRDFKHLNLDFQLI D E GKKKLKID+WFG+RKTSA+IRTALSHVDNLI+GVT+G+RYKMRFVYAHFPINASI  D KSIEIRNFLGEKKVRKV+ML+GV++VRSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLDGIYVSEK  IV +E*
Sbjct:    1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEEE* 195
[Close]
BLAST of Vigst.02G125700.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:12010986-12012223 FORWARD LENGTH=194)

HSP 1 Score: 345.895 bits (886), Expect = 5.930e-123
Identity = 170/195 (87.18%), Postives = 184/195 (94.36%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITD-ENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE* 194
            MKTILSSETM+IPD V+IKVHAKVIEVEGPRGKLVRDFKHLNLDFQLI D E GKKKLKID+WFG+RKTSA+IRTALSHVDNLI+GVT+G+RYKMRFVYAHFPINASI  D KSIEIRNFLGEKKVRKV+ML+GV++VRSEKVKDE+VLDGNDIELVSRSCALINQKCHVK KDIRKFLDGIYVSEK  IV +E*
Sbjct:    1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKIDSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNFLGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKSKIVEEE* 195
[Close]
BLAST of Vigst.02G125700.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:6463201-6464458 REVERSE LENGTH=194)

HSP 1 Score: 337.806 bits (865), Expect = 7.643e-120
Identity = 164/195 (84.10%), Postives = 183/195 (93.85%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDE-NGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE* 194
            MKTILSSETM+IPDGV+IKV+AKVIEVEGPRGKL RDFKHLNLDFQLI D+  GK++LKID+WFGSRKTSA+IRTALSHVDNLI GVT+G+ Y+MRFVYAHFPINASI  +NKSIEIRNFLGEKKVRKV+ML+GV +VRSEKVKDE++L+GNDIELVSRSCALINQKCHVK KDIRKFLDGIYVSEKG I V+E*
Sbjct:    1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLDGIYVSEKGKIAVEE* 195
[Close]
BLAST of Vigst.02G125700.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:6463837-6464458 REVERSE LENGTH=175)

HSP 1 Score: 289.271 bits (739), Expect = 6.813e-101
Identity = 139/166 (83.73%), Postives = 157/166 (94.58%), Query Frame = 0 
Query:    1 MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITDE-NGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAHFPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDGNDIELVSRSCALINQ 165
            MKTILSSETM+IPDGV+IKV+AKVIEVEGPRGKL RDFKHLNLDFQLI D+  GK++LKID+WFGSRKTSA+IRTALSHVDNLI GVT+G+ Y+MRFVYAHFPINASI  +NKSIEIRNFLGEKKVRKV+ML+GV +VRSEKVKDE++L+GNDIELVSRSCALINQ
Sbjct:    1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKIDSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNFLGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQ 166
The following BLAST results are available for this feature:
BLAST of Vigst.02G125700.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3T858|A0A0S3T858_PHAAN1.026e-13699.48Large ribosomal subunit protein uL6 alpha-beta dom... [more]
tr|A0A0L9VN78|A0A0L9VN78_PHAAN1.026e-13699.4860S ribosomal protein OS=Phaseolus angularis OX=39... [more]
tr|A0A1S3UB10|A0A1S3UB10_VIGRR2.911e-13698.9660S ribosomal protein L9 OS=Vigna radiata var. rad... [more]
tr|A0A0L9UE15|A0A0L9UE15_PHAAN3.143e-13698.9660S ribosomal protein OS=Phaseolus angularis OX=39... [more]
tr|A0A4D6NRY6|A0A4D6NRY6_VIGUN3.248e-13698.96Large subunit ribosomal protein L9e OS=Vigna ungui... [more]
tr|A0A0S3RE32|A0A0S3RE32_PHAAN2.948e-13597.93Large ribosomal subunit protein uL6 alpha-beta dom... [more]
tr|A0A0L9UEK9|A0A0L9UEK9_PHAAN2.948e-13597.9360S ribosomal protein OS=Phaseolus angularis OX=39... [more]
tr|V5NAN5|V5NAN5_PHAVU3.965e-13597.9360S ribosomal protein L9 OS=Phaseolus vulgaris OX=... [more]
tr|V7ART1|V7ART1_PHAVU2.533e-13497.41Large ribosomal subunit protein uL6 alpha-beta dom... [more]
tr|A0A4D6M1F2|A0A4D6M1F2_VIGUN3.928e-13496.89Large subunit ribosomal protein L9e OS=Vigna ungui... [more]
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BLAST of Vigst.02G125700.01 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|P30707|RL9_PEA2.209e-12991.71Large ribosomal subunit protein uL6 OS=Pisum sativ... [more]
sp|P49209|RL91_ARATH7.785e-12287.11Large ribosomal subunit protein uL6z/uL6y OS=Arabi... [more]
sp|Q9SZX9|RL92_ARATH1.004e-11884.02Large ribosomal subunit protein uL6x OS=Arabidopsi... [more]
sp|P49210|RL9_ORYSJ2.762e-11581.25Large ribosomal subunit protein uL6 OS=Oryza sativ... [more]
sp|Q90YW0|RL9_ICTPU3.652e-7658.55Large ribosomal subunit protein uL6 OS=Ictalurus p... [more]
sp|G1SWI6|RL9_RABIT3.184e-7558.73Large ribosomal subunit protein uL6 OS=Oryctolagus... [more]
sp|Q5IFJ7|RL9_MACFA3.591e-7558.73Large ribosomal subunit protein uL6 OS=Macaca fasc... [more]
sp|P51410|RL9_MOUSE4.568e-7558.20Large ribosomal subunit protein uL6 OS=Mus musculu... [more]
sp|Q3SYR7|RL9_BOVIN6.553e-7558.20Large ribosomal subunit protein uL6 OS=Bos taurus ... [more]
sp|P32969|RL9_HUMAN6.997e-7558.20Large ribosomal subunit protein uL6 OS=Homo sapien... [more]
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BLAST of Vigst.02G125700.01 vs. Araport11
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11)
Total hits: 4
Match NameE-valueIdentityDescription
|5.930e-12387.18Symbols: PGY2 | PIGGYBACK2 | chr1:12023360-1202450... [more]
|5.930e-12387.18Symbols: no symbol available | no full name availa... [more]
|7.643e-12084.10Symbols: no symbol available | no full name availa... [more]
|6.813e-10183.73Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0
Date Performed: 2024-08-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.90.930.12:FF:000003coord: 90..193
e-value: 4.3E-52
score: 176.5
NoneNo IPR availableFUNFAMG3DSA:3.90.930.12:FF:000004coord: 1..89
e-value: 8.6E-37
score: 127.3
IPR000702Large ribosomal subunit protein uL6-likePIRSFPIRSF002162RPL6p_RPL6a_RPL9e_RPL9ocoord: 1..189
e-value: 6.7E-32
score: 103.4
IPR000702Large ribosomal subunit protein uL6-likePANTHERPTHR1165560S/50S RIBOSOMAL PROTEIN L6/L9coord: 1..189
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 1..89
e-value: 1.9E-29
score: 104.0
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 90..193
e-value: 6.3E-52
score: 176.0
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 1..89
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 90..186
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainPFAMPF00347Ribosomal_L6coord: 101..180
e-value: 6.2E-9
score: 47.8
coord: 12..89
e-value: 3.7E-6
score: 38.9

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigStip.JP252948.2.0.Vigst.02G125700.01 ID=drVigStip.JP252948.2.0.Vigst.02G125700.01; Name=Vigst.02G125700.01; organism=Vigna stipulacea; type=mRNA; length=582bp
ATGAAGACGATTCTCTCATCAGAGACGATGAACATTCCCGATGGCGTGAG
CATCAAGGTTCACGCCAAGGTGATCGAGGTTGAAGGCCCTCGTGGAAAAC
TAGTGCGAGACTTCAAACATCTCAACCTTGATTTTCAGCTCATCACCGAC
GAGAACGGCAAGAAAAAGCTCAAGATCGACGCCTGGTTTGGATCTCGGAA
AACCTCAGCCGCCATTCGCACCGCCCTCAGTCACGTCGACAATCTCATCA
CCGGCGTCACCAAGGGCTACCGTTACAAGATGAGGTTCGTGTACGCTCAC
TTCCCCATCAACGCCAGCATTGCCAACGACAATAAGTCCATTGAAATCCG
AAATTTCCTCGGCGAGAAGAAGGTGAGAAAAGTTGACATGCTGGAGGGTG
TGTCCGTTGTTCGGTCTGAAAAGGTTAAGGATGAGTTGGTTTTGGATGGA
AACGATATCGAACTCGTCTCCCGGTCTTGTGCTCTGATTAACCAGAAATG
TCATGTTAAGAACAAGGATATTCGGAAGTTCCTTGATGGTATCTACGTAA
GCGAGAAGGGAACCATAGTAGTAGACGAGTAG
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protein sequence of drVigStip.JP252948.2.0.Vigst.02G125700.01

>drVigStip.JP252948.2.0.Vigst.02G125700.01 ID=drVigStip.JP252948.2.0.Vigst.02G125700.01; Name=drVigStip.JP252948.2.0.Vigst.02G125700.01; organism=Vigna stipulacea; type=polypeptide; length=194bp
MKTILSSETMNIPDGVSIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLITD
ENGKKKLKIDAWFGSRKTSAAIRTALSHVDNLITGVTKGYRYKMRFVYAH
FPINASIANDNKSIEIRNFLGEKKVRKVDMLEGVSVVRSEKVKDELVLDG
NDIELVSRSCALINQKCHVKNKDIRKFLDGIYVSEKGTIVVDE*
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mRNA from alignment at Chr02:14324160..14325230-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigStip.JP252948.2.0.Vigst.02G125700.01 ID=drVigStip.JP252948.2.0.Vigst.02G125700.01; Name=Vigst.02G125700.01; organism=Vigna stipulacea; type=mRNA; length=1071bp; location=Sequence derived from: Chr02:14324160..14325230- (Vigna stipulacea
GTTTTGGAAGTGCAGTGAGGGAGGTGCGTTGTCTGCGACAGAGAGGGAGA
GTTGCAGCAACAATGAAGACGATTCTCTCATCAGAGACGATGAACATTCC
CGATGGCGTGAGCATCAAGGTTCACGCCAAGGTGATCGAGGTTGAAGGCC
CTCGTGGAAAACTAGTGCGAGACTTCAAACATCTCAACCTTGATTTTCAG
CTCATCACCGACGAGAACGGCAAGAAAAAGCTCAAGATCGACGCCTGGTT
TGGATCTCGGAAAACCTCAGCCGCCATTCGCACCGCCCTCAGTCACGTCG
ACAATCTCATCACCGGCGTCACCAAGGGCTACCGTTACAAGATGAGGTTC
GTGTACGCTCACTTCCCCATCAACGCCAGCATTGCCAACGACAATAAGTC
CATTGAAATCCGAAATTTCCTCGGCGAGAAGAAGGTGCACAAATACTCTT
CCTATATATTTTTAATTAATTAATTTTCTCTTTAATTTGATATTAAGAAA
AATGTGCGATTAGGTTTAGTGATTTATTTTGTTACTTGTGCGAGATTAGG
TGAGAAAAGTTGACATGCTGGAGGGTGTGTCCGTTGTTCGGTCTGAAAAG
GTTAAGGATGAGTTGGTTTTGGATGGAAACGATATCGAACTCGTCTCCCG
GTCTTGTGCTCTGATTAACCAGGTATTTTCTTTCTCTCTGACATACCCTG
CCAAACCCTTTTCTATTCTACTGTTGTTTAGACTTCAATTGTTTTTCTGT
TATTTTGCTACAGAAATGTCATGTTAAGAACAAGGATATTCGGAAGTTCC
TTGATGGTATCTACGTAAGCGAGAAGGGAACCATAGTAGTAGACGAGTAG
ACAATGAGATCAGACATTATGCTATTTAGTTTCGAAATCTTTTTTGAGTT
TGAATTTTACAATTTTTGTGTTGTCAAACTTGTCTTTGCAGAAATATTTT
ATTCGAAATTTATGCCATGGAATTTTTGCCTAATTCACTTCACAGTCCAT
AGATATTTTGCTATTCTTAATGTGTATTGTGATGAATGTTTATTTAAGCA
GTGAATTGACTGAATTCATAA
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Coding sequence (CDS) from alignment at Chr02:14324160..14325230-

>drVigStip.JP252948.2.0.Vigst.02G125700.01 ID=drVigStip.JP252948.2.0.Vigst.02G125700.01; Name=Vigst.02G125700.01; organism=Vigna stipulacea; type=CDS; length=582bp; location=Sequence derived from: Chr02:14324160..14325230- (Vigna stipulacea
ATGAAGACGATTCTCTCATCAGAGACGATGAACATTCCCGATGGCGTGAG
CATCAAGGTTCACGCCAAGGTGATCGAGGTTGAAGGCCCTCGTGGAAAAC
TAGTGCGAGACTTCAAACATCTCAACCTTGATTTTCAGCTCATCACCGAC
GAGAACGGCAAGAAAAAGCTCAAGATCGACGCCTGGTTTGGATCTCGGAA
AACCTCAGCCGCCATTCGCACCGCCCTCAGTCACGTCGACAATCTCATCA
CCGGCGTCACCAAGGGCTACCGTTACAAGATGAGGTTCGTGTACGCTCAC
TTCCCCATCAACGCCAGCATTGCCAACGACAATAAGTCCATTGAAATCCG
AAATTTCCTCGGCGAGAAGAAGGTGAGAAAAGTTGACATGCTGGAGGGTG
TGTCCGTTGTTCGGTCTGAAAAGGTTAAGGATGAGTTGGTTTTGGATGGA
AACGATATCGAACTCGTCTCCCGGTCTTGTGCTCTGATTAACCAGAAATG
TCATGTTAAGAACAAGGATATTCGGAAGTTCCTTGATGGTATCTACGTAA
GCGAGAAGGGAACCATAGTAGTAGACGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000702Ribosomal_uL6-like
IPR036789Ribosomal_uL6-like_a/b-dom_sf
IPR020040Ribosomal_uL6_a/b-dom
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0019843rRNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome