Vigst.04G225200.01

Transcript Overview
NameVigst.04G225200.01
Unique NamedrVigStip.JP252948.2.0.Vigst.04G225200.01
TypemRNA
OrganismVigna stipulacea ()
Sequence length384
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr04chromosomeChr04:34977523..34978139 +Vigna stipulacea acc. JP252948 genome v2.a1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vstvvaR429Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR444Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR476Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvvaR514Vicia villosa cv. AU Merit genome v1.0Vicia villosa
anvstL0310Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0633Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0765Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0993Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL0996Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL1117Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL1162Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvstL1251Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carvstL040Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pvvstL036Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
carvstL214Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvstL234Pisum sativum Cameor genome v1aPisum sativum
psvstL237Pisum sativum Cameor genome v1aPisum sativum
pvvstL161Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
carvstL332Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
psvstL497Pisum sativum Cameor genome v1aPisum sativum
psvstL628Pisum sativum Cameor genome v1aPisum sativum
carvstL595Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
pvvstL532Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvstL684Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
vssvstL093Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvstL175Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vstvstR231Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstL207Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vstvstR235Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vrvvstL255Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvstL250Vicia sativa cv. Studenica genome v1.0Vicia sativa
vfhvstL443Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vstvuR307Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvuR325Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vfhvstL637Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vstvuR345Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvuR366Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vstvumR357Vigna umbellata FF25 genome v1.0Vigna umbellata
vssvstL615Vicia sativa cv. Studenica genome v1.0Vicia sativa
vstvumR395Vigna umbellata FF25 genome v1.0Vigna umbellata
vstvumR408Vigna umbellata FF25 genome v1.0Vigna umbellata
vfhvstL772Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vstvumR411Vigna umbellata FF25 genome v1.0Vigna umbellata
vssvstL885Vicia sativa cv. Studenica genome v1.0Vicia sativa
vasvstL365Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvstL495Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvstL538Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvstL622Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Orthologs
Gene/TranscriptAssemblySpecies
evm.Ca_v2.0_07820Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Vigun01g175400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
evm.Ca_v2.0_10425Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
rna-TanjilR_28584Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.08G292300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Hedin2.R1.3g040040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigan.04G347700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vum_08G02179.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.5g150760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vum_04G02536.1Vigna umbellata FF25 genome v1.0Vigna umbellata
XM_058915266.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-XM_014640195.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_10689Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg1028.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat3g032080.1Pisum sativum Cameor genome v1aPisum sativum
Vigun07g062500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Phvul.007G227100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
XM_058884783.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigst.04G225200drVigStip.JP252948.2.0.Vigst.04G225200Vigna stipulaceagene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
nbis-exon-62261drVigStip.JP252948.2.0.nbis-exon-62261Vigna stipulaceaexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
five_prime_utr-9631drVigStip.JP252948.2.0.five_prime_utr-9631Vigna stipulaceafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds-60119drVigStip.JP252948.2.0.cds-60119Vigna stipulaceaCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
three_prime_utr-9095drVigStip.JP252948.2.0.three_prime_utr-9095Vigna stipulaceathree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drVigStip.JP252948.2.0.Vigst.04G225200.01drVigStip.JP252948.2.0.Vigst.04G225200.01Vigna stipulaceapolypeptide
drVigStip.JP252948.2.0.Vigst.04G225200.01drVigStip.JP252948.2.0.Vigst.04G225200.01-proteinVigna stipulaceapolypeptide


Homology
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RZA2|A0A0S3RZA2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G347700 PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.414e-86
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0 
Query:    1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
            MLGKKMVSFKKLAKRVKGVGGFE DPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV
Sbjct:    1 MLGKKMVSFKKLAKRVKGVGGFEPDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9U8D0|A0A0L9U8D0_PHAAN (Auxin-responsive protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0054660 PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.414e-86
Identity = 126/127 (99.21%), Postives = 126/127 (99.21%), Query Frame = 0 
Query:    1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
            MLGKKMVSFKKLAKRVKGVGGFE DPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV
Sbjct:    1 MLGKKMVSFKKLAKRVKGVGGFEPDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TPJ9|A0A1S3TPJ9_VIGRR (Auxin-responsive protein SAUR15 OS=Vigna radiata var. radiata OX=3916 GN=LOC106757523 PE=3 SV=1)

HSP 1 Score: 255.758 bits (652), Expect = 6.090e-86
Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 0 
Query:    1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
            MLGKKMVSFKKLAKRVKGVGGF+ DPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNA+ECNNGKFDLGKFFAEFV
Sbjct:    1 MLGKKMVSFKKLAKRVKGVGGFDPDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAVECNNGKFDLGKFFAEFV 127
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MB87|A0A4D6MB87_VIGUN (SAUR family protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2789 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 8.504e-79
Identity = 118/127 (92.91%), Postives = 120/127 (94.49%), Query Frame = 0 
Query:    1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
            MLGKKMVSFKKLAK+VKGVGGF+    PAHHEGLL NYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEK YNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNG FDLGKFFAEFV
Sbjct:    1 MLGKKMVSFKKLAKKVKGVGGFD----PAHHEGLLKNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGTFDLGKFFAEFV 123
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86V718|A0AA86V718_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS2782 PE=4 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.029e-76
Identity = 114/127 (89.76%), Postives = 119/127 (93.70%), Query Frame = 0 
Query:    1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
            MLGK+MVSFKKLAK+VKGVGG  LDP PAHHEGLL  YEEKC TN+PPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEK YNEFGFSQRNGLVVPC VSTFEEV+NA+ECNNGKFDLGKFFAEFV
Sbjct:    1 MLGKRMVSFKKLAKKVKGVGG--LDPDPAHHEGLLKKYEEKCDTNTPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCCVSTFEEVVNAVECNNGKFDLGKFFAEFV 125
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445FIS3|A0A445FIS3_GLYSO (Auxin-responsive protein SAUR50 OS=Glycine soja OX=3848 GN=D0Y65_051990 PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.330e-74
Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 0 
Query:    1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
            MLGKKMV FKKLAK+VKGV G + DPYPAHHE LL  YEE+C  N+PPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEK YNEFGFSQRNGLVVPCSVSTF+EV+NAIECNN KFDLGK FAEFV
Sbjct:    1 MLGKKMVLFKKLAKKVKGVRGIDPDPYPAHHECLLKEYEEECAINTPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCSVSTFQEVVNAIECNNDKFDLGKIFAEFV 127
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|I1NAP8|I1NAP8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100776885 PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.330e-74
Identity = 109/127 (85.83%), Postives = 115/127 (90.55%), Query Frame = 0 
Query:    1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
            MLGKKMV FKKLAK+VKGV G + DPYPAHHE LL  YEE+C  N+PPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEK YNEFGFSQRNGLVVPCSVSTF+EV+NAIECNN KFDLGK FAEFV
Sbjct:    1 MLGKKMVLFKKLAKKVKGVRGIDPDPYPAHHECLLKEYEEECAINTPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFGFSQRNGLVVPCSVSTFQEVVNAIECNNDKFDLGKIFAEFV 127
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|I1L9E9|I1L9E9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100790208 PE=3 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 6.460e-61
Identity = 98/129 (75.97%), Postives = 108/129 (83.72%), Query Frame = 0 
Query:    1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEE--KCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
            MLGKKMVS KKLAKRVKGVGG +    P + E LL  YEE  +  +++ PTGFFALYVGEERQRYVVPT YLSHPLFKMLLEK YNEFGF+QRNGLVVPCSVSTF+EV+NAIECNNGKFDLGK F +F 
Sbjct:    1 MLGKKMVSLKKLAKRVKGVGGADHSD-PPYQECLLKGYEEGKESPSSTTPTGFFALYVGEERQRYVVPTSYLSHPLFKMLLEKAYNEFGFAQRNGLVVPCSVSTFQEVVNAIECNNGKFDLGKIFEDFA 128
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|I1JGM8|I1JGM8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100782364 PE=3 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 5.726e-60
Identity = 100/129 (77.52%), Postives = 107/129 (82.95%), Query Frame = 0 
Query:    1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEE-KCVTNSP-PTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
            MLGKKMVS KKLAKRVKGVGG +    P + E LL  YEE K   +SP PTGFFALYVGEERQRYVVPT YLSHPLFKMLLEK YNEFGF+QRNGLVVPCSVSTF+EV+NAIECNNG FDLGK F +F 
Sbjct:    1 MLGKKMVSLKKLAKRVKGVGGADHSD-PPYQECLLKGYEEDKESPSSPTPTGFFALYVGEERQRYVVPTSYLSHPLFKMLLEKAYNEFGFAQRNGLVVPCSVSTFQEVVNAIECNNGNFDLGKIFEDFA 128
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2SEW1|A0A0B2SEW1_GLYSO (Auxin-induced protein 15A OS=Glycine soja OX=3848 GN=D0Y65_004537 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 5.726e-60
Identity = 100/129 (77.52%), Postives = 107/129 (82.95%), Query Frame = 0 
Query:    1 MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEE-KCVTNSP-PTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV 127
            MLGKKMVS KKLAKRVKGVGG +    P + E LL  YEE K   +SP PTGFFALYVGEERQRYVVPT YLSHPLFKMLLEK YNEFGF+QRNGLVVPCSVSTF+EV+NAIECNNG FDLGK F +F 
Sbjct:    1 MLGKKMVSLKKLAKRVKGVGGADHSD-PPYQECLLKGYEEDKESPSSPTPTGFFALYVGEERQRYVVPTSYLSHPLFKMLLEKAYNEFGFAQRNGLVVPCSVSTFQEVVNAIECNNGNFDLGKIFEDFA 128
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|O65695|SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.071e-17
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:   38 YEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110
            Y+E C+    P G F +YVGE R RY+VP  +L+HP F+ LL++   EFGF    GL +PC    F+ + + I
Sbjct:   34 YDEDCLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SIG9|SAU12_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 12 OS=Arabidopsis thaliana OX=3702 GN=SAUR12 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.430e-15
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:   38 YEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110
            Y+E  +    P G F +YVGE+R RY+VP  +L+HP FK LL++   EFGF+   GL +PC    F  + + I
Sbjct:   31 YDEDGLPVDVPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|P0DKL1|SAU50_HELAN (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.008e-14
Identity = 28/67 (41.79%), Postives = 41/67 (61.19%), Query Frame = 0 
Query:   37 NYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTF 103
            N ++  + N  P G F +YVGE R RY+VP   L HP F+ LL+++  EFGF+   G+++PC    F
Sbjct:   29 NNDDSGLPNDVPKGHFVVYVGERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIPCQEVDF 95
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6NMM4|SAU26_ARATH (Auxin-responsive protein SAUR26 OS=Arabidopsis thaliana OX=3702 GN=SAUR26 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.777e-14
Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0 
Query:   43 VTNSPPTGFFALYVGE--ERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQ-RNGLVVPCSVSTFEEVLNAIE 111
             + +PP GF A+YVGE  ++QR+ VP  YL+ PLF+ LL K   EFGF     GL +PC V TF  + + ++
Sbjct:   21 TSKAPPKGFLAVYVGESQKKQRHFVPVSYLNQPLFQDLLSKCEEEFGFDHPMGGLTIPCPVDTFISITSQLQ 92
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SRW1|SAU27_ARATH (Auxin-responsive protein SAUR27 OS=Arabidopsis thaliana OX=3702 GN=SAUR27 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.323e-13
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:   44 TNSPPTGFFALYVGE--ERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQ-RNGLVVPCSVSTFEEVLNAIE 111
            + S P GF A+YVGE  ++QRY+V   YLS PLF+ LL K+  EFGF     GL +PC   TF  V + I+
Sbjct:   24 STSAPKGFLAVYVGESQKKQRYLVLVSYLSQPLFQDLLSKSEEEFGFDHPMGGLTIPCPEDTFLTVTSRIQ 94
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FXI0|SAU54_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 54 OS=Arabidopsis thaliana OX=3702 GN=SAUR54 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 3.221e-13
Identity = 32/102 (31.37%), Postives = 53/102 (51.96%), Query Frame = 0 
Query:    9 FKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110
             K++ KR   +G  +   Y   HE     ++   +    P G F +YVG  R RYV+P  +L+ P F++LL++   EFGF    GL +PC    F+ ++ ++
Sbjct:   15 IKQILKRCSSLGKKQSSEYNDTHE-----HDGDSLPLDVPKGHFVVYVGGNRVRYVLPISFLTRPEFQLLLQQAEEEFGFDHNMGLTIPCEEVAFKSLITSM 111
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q41220|SAU15_ARATH (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.288e-13
Identity = 34/72 (47.22%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:   44 TNSPPTGFFALYVGEERQ---RYVVPTRYLSHPLFKMLLEKTYNEFGFSQ-RNGLVVPCSVSTFEEVLNAIE 111
            ++S P GF A+YVGE  Q   RYVVP  YL+ PLF+ LL K+  EFG+     GL +PC  S F  V + I+
Sbjct:   18 SSSTPRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHPMGGLTIPCHESLFFTVTSQIQ 89
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|O65648|SAUR9_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 9 OS=Arabidopsis thaliana OX=3702 GN=SAUR9 PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 3.672e-13
Identity = 28/67 (41.79%), Postives = 37/67 (55.22%), Query Frame = 0 
Query:   42 CVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLN 108
            C  N  P G F +YVG+ R RYVVP  +L H  F+ LL+    EFGF    GL +PC    F  +++
Sbjct:   35 CYFNDVPKGHFPVYVGQHRSRYVVPISWLDHHEFQSLLQLAEEEFGFEHEMGLTIPCDEVVFRSLIS 101
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FJF9|SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 4.024e-13
Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 0 
Query:   40 EKCVTNSPPTGFFALYVGE-ERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQ-RNGLVVPCSVSTFEEVLNAIE 111
             +   ++ P GF A+YVGE +++RY+VP  YLS P F+ LL K+  EFGF     GL +PC   TF  V + ++
Sbjct:   15 SRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRLQ 88
[Close]
BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FJF6|SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 4.711e-13
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:   42 CVTNSPPTGFFALYVGE-ERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQ-RNGLVVPCSVSTFEEVLNAI 110
               ++PP GF A+YVGE +++RY+VP  YL+ P F+ LL K+  EFGF     GL +PC   TF  V + +
Sbjct:   19 AAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFINVTSRL 89
[Close]
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR45 | SMALL AUXIN UPREGULATED RNA 45 | chr2:15186326-15186733 REVERSE LENGTH=135)

HSP 1 Score: 125.176 bits (313), Expect = 9.202e-38
Identity = 68/136 (50.00%), Postives = 93/136 (68.38%), Query Frame = 0 
Query:    1 MLGKKMVSFKKLAKRVKGV-----GGFELDPYPAHHEGLLNNY--EEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEF-GFSQRNGLVVPCSVSTFEEVLNAIECNNGKFDLGKFFAEFV* 128
            MLGK++ SFK LAK++K +      G E      ++E LL N   E   + +  PTG FA+YVGEER + VVPT YL+HPLF+MLL+K+++EF  F Q+  LVVPCS+S F++V+NA+E  NG FD G+F  EF+*
Sbjct:    1 MLGKRIASFKNLAKKMKSINTTTRSGGEGGSESTYNESLLMNEADEAAMMASKTPTGTFAVYVGEERVKRVVPTSYLNHPLFRMLLDKSHDEFLCFEQKVMLVVPCSLSVFQDVVNAVESCNGNFDFGEFVEEFL* 136
[Close]
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR70 | SMALL AUXIN UPREGULATED RNA 70 | chr5:7044791-7045555 FORWARD LENGTH=165)

HSP 1 Score: 81.2629 bits (199), Expect = 3.092e-20
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0 
Query:   36 NNYEEKCVTNSPP----TGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECN 113
            ++ EE C +  PP     G  A+YVG E +R+++PT YLSH LFK+LLEK   EFGF Q   L +PC V TF+ +L  +E N
Sbjct:   64 DSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVETFKYLLKCMENN 145
[Close]
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR70 | SMALL AUXIN UPREGULATED RNA 70 | chr5:7044791-7045363 FORWARD LENGTH=190)

HSP 1 Score: 80.8777 bits (198), Expect = 7.134e-20
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0 
Query:   36 NNYEEKCVTNSPP----TGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECN 113
            ++ EE C +  PP     G  A+YVG E +R+++PT YLSH LFK+LLEK   EFGF Q   L +PC V TF+ +L  +E N
Sbjct:   64 DSDEETCQSPEPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVETFKYLLKCMENN 145
[Close]
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR18 | SMALL AUXIN UPREGULATED RNA 18 | chr3:19018853-19019173 REVERSE LENGTH=106)

HSP 1 Score: 76.6406 bits (187), Expect = 4.613e-19
Identity = 32/64 (50.00%), Postives = 46/64 (71.88%), Query Frame = 0 
Query:   47 PPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110
            P  G+FA+YVG  R R+V+P   L+HP FKM+L+K+  EFGF Q +GL +PC  +TF  +L++I
Sbjct:   40 PKKGYFAVYVGHFRDRHVIPITSLNHPTFKMMLQKSEEEFGFRQESGLTIPCDQNTFLTLLDSI 103
[Close]
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR39 | SMALL AUXIN UPREGULATED RNA 39 | chr3:15094644-15095312 FORWARD LENGTH=160)

HSP 1 Score: 76.6406 bits (187), Expect = 1.632e-18
Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 0 
Query:   36 NNYEEKCVTNSPP----TGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNGKFD 118
            ++ E  C +  PP     G+ A+YVG E +R+++PT +LSH LFK+LLEK   E+GF     L +PC V TF+ +L  IE N+ K D
Sbjct:   64 SDEETTCQSPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVETFKYLLKCIE-NHPKDD 149
[Close]
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR11 | SMALL AUXIN UPREGULATED RNA 11 | chr5:26471269-26471658 FORWARD LENGTH=99)

HSP 1 Score: 74.3294 bits (181), Expect = 3.149e-18
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 0 
Query:   45 NSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110
            N  P G F +YVG  R R+V+P  +L+HP+F+MLL+++  EFGF Q NGL +PC    F  ++++I
Sbjct:   32 NGVPKGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDNGLTIPCDEHFFRALISSI 97
[Close]
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR50 | SMALL AUXIN UPREGULATED RNA 50 | chr4:16582471-16582794 REVERSE LENGTH=107)

HSP 1 Score: 73.1738 bits (178), Expect = 9.405e-18
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:   38 YEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110
            Y+E C+    P G F +YVGE R RY+VP  +L+HP F+ LL++   EFGF    GL +PC    F+ + + I
Sbjct:   34 YDEDCLPLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106
[Close]
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR47 | SMALL AUXIN UPREGULATED RNA 47 | chr3:7055060-7055416 FORWARD LENGTH=118)

HSP 1 Score: 72.4034 bits (176), Expect = 2.505e-17
Identity = 33/74 (44.59%), Postives = 49/74 (66.22%), Query Frame = 0 
Query:   45 NSPPTGFFALYVG-EERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVL-NAIECNNGK 116
            N  P G  A+YVG EERQR+V+PT+YL +P F+ L+++  +EFG+    G+ +PC  S FEE+L   + C+  K
Sbjct:   45 NGVPRGHLAVYVGREERQRFVIPTKYLQYPEFRSLMDEVADEFGYDHEGGIHIPCEESVFEEILIRYMSCDKKK 118
[Close]
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR12 | SMALL AUXIN UPREGULATED RNA 12 | chr2:9089380-9089694 FORWARD LENGTH=104)

HSP 1 Score: 69.707 bits (169), Expect = 2.518e-16
Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:   38 YEEKCVTNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAI 110
            Y+E  +    P G F +YVGE+R RY+VP  +L+HP FK LL++   EFGF+   GL +PC    F  + + I
Sbjct:   31 YDEDGLPVDVPKGHFPVYVGEKRSRYIVPISFLTHPKFKSLLQQAEEEFGFNHDMGLTIPCEEVVFRSLTSMI 103
[Close]
BLAST of Vigst.04G225200.01 vs. Araport11
Match: | (Symbols: SAUR37 | SMALL AUXIN UPREGULATED RNA 37 | chr4:15193993-15194562 REVERSE LENGTH=189)

HSP 1 Score: 71.2478 bits (173), Expect = 3.975e-16
Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:   44 TNSPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSVSTFEEVLNAIECNNG 115
            T + P G+ A+ VG+E +RY +PT YLSH  F +LL +   EFGF Q   L +PC V+ FE +L  +E N  
Sbjct:   77 TTAIPKGYLAVSVGKEEKRYKIPTEYLSHQAFHVLLREAEEEFGFEQAGILRIPCEVAVFESILKIMEDNKS 148
The following BLAST results are available for this feature:
BLAST of Vigst.04G225200.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A0S3RZA2|A0A0S3RZA2_PHAAN1.414e-8699.21Uncharacterized protein OS=Vigna angularis var. an... [more]
tr|A0A0L9U8D0|A0A0L9U8D0_PHAAN1.414e-8699.21Auxin-responsive protein OS=Phaseolus angularis OX... [more]
tr|A0A1S3TPJ9|A0A1S3TPJ9_VIGRR6.090e-8697.64Auxin-responsive protein SAUR15 OS=Vigna radiata v... [more]
tr|A0A4D6MB87|A0A4D6MB87_VIGUN8.504e-7992.91SAUR family protein OS=Vigna unguiculata OX=3917 G... [more]
tr|A0AA86V718|A0AA86V718_9FABA1.029e-7689.76Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A445FIS3|A0A445FIS3_GLYSO1.330e-7485.83Auxin-responsive protein SAUR50 OS=Glycine soja OX... [more]
tr|I1NAP8|I1NAP8_SOYBN1.330e-7485.83Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|I1L9E9|I1L9E9_SOYBN6.460e-6175.97Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|I1JGM8|I1JGM8_SOYBN5.726e-6077.52Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0B2SEW1|A0A0B2SEW1_GLYSO5.726e-6077.52Auxin-induced protein 15A OS=Glycine soja OX=3848 ... [more]
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BLAST of Vigst.04G225200.01 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
sp|O65695|SAU50_ARATH9.071e-1742.47Auxin-responsive protein SAUR50 OS=Arabidopsis tha... [more]
sp|Q9SIG9|SAU12_ARATH2.430e-1542.47Protein SMALL AUXIN UP-REGULATED RNA 12 OS=Arabido... [more]
sp|P0DKL1|SAU50_HELAN1.008e-1441.79Auxin-responsive protein SAUR50 OS=Helianthus annu... [more]
sp|Q6NMM4|SAU26_ARATH2.777e-1444.44Auxin-responsive protein SAUR26 OS=Arabidopsis tha... [more]
sp|Q9SRW1|SAU27_ARATH2.323e-1347.89Auxin-responsive protein SAUR27 OS=Arabidopsis tha... [more]
sp|Q9FXI0|SAU54_ARATH3.221e-1331.37Protein SMALL AUXIN UP-REGULATED RNA 54 OS=Arabido... [more]
sp|Q41220|SAU15_ARATH3.288e-1347.22Auxin-responsive protein SAUR15 OS=Arabidopsis tha... [more]
sp|O65648|SAUR9_ARATH3.672e-1341.79Protein SMALL AUXIN UP-REGULATED RNA 9 OS=Arabidop... [more]
sp|Q9FJF9|SAU21_ARATH4.024e-1341.89Auxin-responsive protein SAUR21 OS=Arabidopsis tha... [more]
sp|Q9FJF6|SAU23_ARATH4.711e-1343.66Auxin-responsive protein SAUR23 OS=Arabidopsis tha... [more]
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BLAST of Vigst.04G225200.01 vs. Araport11
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|9.202e-3850.00Symbols: SAUR45 | SMALL AUXIN UPREGULATED RNA 45 |... [more]
|3.092e-2047.56Symbols: SAUR70 | SMALL AUXIN UPREGULATED RNA 70 |... [more]
|7.134e-2047.56Symbols: SAUR70 | SMALL AUXIN UPREGULATED RNA 70 |... [more]
|4.613e-1950.00Symbols: SAUR18 | SMALL AUXIN UPREGULATED RNA 18 |... [more]
|1.632e-1843.68Symbols: SAUR39 | SMALL AUXIN UPREGULATED RNA 39 |... [more]
|3.149e-1845.45Symbols: SAUR11 | SMALL AUXIN UPREGULATED RNA 11 |... [more]
|9.405e-1842.47Symbols: SAUR50 | SMALL AUXIN UPREGULATED RNA 50 |... [more]
|2.505e-1744.59Symbols: SAUR47 | SMALL AUXIN UPREGULATED RNA 47 |... [more]
|2.518e-1642.47Symbols: SAUR12 | SMALL AUXIN UPREGULATED RNA 12 |... [more]
|3.975e-1644.44Symbols: SAUR37 | SMALL AUXIN UPREGULATED RNA 37 |... [more]
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InterPro
Analysis Name: InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0
Date Performed: 2024-08-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 39..110
e-value: 1.2E-20
score: 84.9
IPR003676Small auxin-up RNAPANTHERPTHR31374AUXIN-INDUCED PROTEIN-LIKE-RELATEDcoord: 39..109

Sequences
The following sequences are available for this feature:

mRNA sequence

>drVigStip.JP252948.2.0.Vigst.04G225200.01 ID=drVigStip.JP252948.2.0.Vigst.04G225200.01; Name=Vigst.04G225200.01; organism=Vigna stipulacea; type=mRNA; length=384bp
ATGTTAGGGAAAAAGATGGTATCTTTCAAGAAACTGGCAAAAAGGGTGAA
GGGTGTAGGTGGATTTGAGCTTGATCCTTACCCTGCTCATCATGAAGGTT
TGCTCAATAACTATGAAGAAAAATGCGTGACTAACTCACCCCCAACAGGG
TTTTTTGCTCTTTATGTCGGAGAAGAGCGCCAAAGATACGTGGTTCCAAC
CCGCTACCTTTCTCACCCCTTGTTCAAGATGCTGCTGGAGAAGACTTACA
ATGAGTTTGGATTTTCTCAGAGGAATGGACTAGTAGTTCCATGCAGTGTT
TCCACGTTTGAGGAGGTGCTGAATGCTATAGAATGCAACAACGGCAAGTT
TGACTTGGGAAAGTTTTTTGCAGAGTTTGTTTGA
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protein sequence of drVigStip.JP252948.2.0.Vigst.04G225200.01

>drVigStip.JP252948.2.0.Vigst.04G225200.01 ID=drVigStip.JP252948.2.0.Vigst.04G225200.01; Name=drVigStip.JP252948.2.0.Vigst.04G225200.01; organism=Vigna stipulacea; type=polypeptide; length=128bp
MLGKKMVSFKKLAKRVKGVGGFELDPYPAHHEGLLNNYEEKCVTNSPPTG
FFALYVGEERQRYVVPTRYLSHPLFKMLLEKTYNEFGFSQRNGLVVPCSV
STFEEVLNAIECNNGKFDLGKFFAEFV*
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mRNA from alignment at Chr04:34977523..34978139+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drVigStip.JP252948.2.0.Vigst.04G225200.01 ID=drVigStip.JP252948.2.0.Vigst.04G225200.01; Name=Vigst.04G225200.01; organism=Vigna stipulacea; type=mRNA; length=617bp; location=Sequence derived from: Chr04:34977523..34978139+ (Vigna stipulacea
GTTCCTCTTCCTAGTTTTTTTGACCTACCCTTCATCTTCCTTAAATATGT
TAGGGAAAAAGATGGTATCTTTCAAGAAACTGGCAAAAAGGGTGAAGGGT
GTAGGTGGATTTGAGCTTGATCCTTACCCTGCTCATCATGAAGGTTTGCT
CAATAACTATGAAGAAAAATGCGTGACTAACTCACCCCCAACAGGGTTTT
TTGCTCTTTATGTCGGAGAAGAGCGCCAAAGATACGTGGTTCCAACCCGC
TACCTTTCTCACCCCTTGTTCAAGATGCTGCTGGAGAAGACTTACAATGA
GTTTGGATTTTCTCAGAGGAATGGACTAGTAGTTCCATGCAGTGTTTCCA
CGTTTGAGGAGGTGCTGAATGCTATAGAATGCAACAACGGCAAGTTTGAC
TTGGGAAAGTTTTTTGCAGAGTTTGTTTGAATCGCATGAAACGCAGAGTC
TCTCATTTTTTTCAAGCTATAATGTATCTCACACACACATGTAATGCACA
ACAATCCAGATAGGTATAGCTTTAACTTTAACTCTGCATGATGTTGTTGT
TGCAACATTTTCAGATAGAATAGATCTGACTTAAAATAGTGATTCGGTGA
ACTTTAATATTGGTTTA
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Coding sequence (CDS) from alignment at Chr04:34977523..34978139+

>drVigStip.JP252948.2.0.Vigst.04G225200.01 ID=drVigStip.JP252948.2.0.Vigst.04G225200.01; Name=Vigst.04G225200.01; organism=Vigna stipulacea; type=CDS; length=384bp; location=Sequence derived from: Chr04:34977523..34978139+ (Vigna stipulacea
ATGTTAGGGAAAAAGATGGTATCTTTCAAGAAACTGGCAAAAAGGGTGAA
GGGTGTAGGTGGATTTGAGCTTGATCCTTACCCTGCTCATCATGAAGGTT
TGCTCAATAACTATGAAGAAAAATGCGTGACTAACTCACCCCCAACAGGG
TTTTTTGCTCTTTATGTCGGAGAAGAGCGCCAAAGATACGTGGTTCCAAC
CCGCTACCTTTCTCACCCCTTGTTCAAGATGCTGCTGGAGAAGACTTACA
ATGAGTTTGGATTTTCTCAGAGGAATGGACTAGTAGTTCCATGCAGTGTT
TCCACGTTTGAGGAGGTGCTGAATGCTATAGAATGCAACAACGGCAAGTT
TGACTTGGGAAAGTTTTTTGCAGAGTTTGTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin