Vigst.08G156600.01

Transcript Overview


Name	Vigst.08G156600.01
Unique Name	drVigStip.JP252948.2.0.Vigst.08G156600.01
Type	mRNA
Organism	Vigna stipulacea ()
Sequence length	354

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr08	chromosome	Chr08:16156086..16162367 -	Vigna stipulacea acc. JP252948 genome v2.a1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna stipulacea acc. JP252948 genome v2.a1	2024-06-27
Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL	2024-08-17
InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0	2024-08-17
Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot	2024-08-17
Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11	2024-08-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
vstvvaR745	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vstvvaR801	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
avjvstL341	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anvstL0505	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
avjvstL419	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anvstL0965	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvstL0966	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
pvvstL079	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
carvstL268	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
psvstL260	Pisum sativum Cameor genome v1a	Pisum sativum
carvstL359	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
psvstL644	Pisum sativum Cameor genome v1a	Pisum sativum
pvvstL731	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
vstvstL254	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vrvvstL281	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vfhvstL462	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvstL683	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vfhvstL692	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vssvstL653	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vstvuR547	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vstvuR594	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
vssvstL921	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vstvumR578	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vstvumR617	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vasvstL389	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvstL648	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis

Orthologs


Gene/Transcript	Assembly	Species
Vum_08G01929.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Vigan.08G250400.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Va02G038020.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vigst.08G156600	drVigStip.JP252948.2.0.Vigst.08G156600	Vigna stipulacea	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
nbis-exon-110219	drVigStip.JP252948.2.0.nbis-exon-110219	Vigna stipulacea	exon
nbis-exon-110220	drVigStip.JP252948.2.0.nbis-exon-110220	Vigna stipulacea	exon
nbis-exon-110221	drVigStip.JP252948.2.0.nbis-exon-110221	Vigna stipulacea	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
three_prime_utr-15632	drVigStip.JP252948.2.0.three_prime_utr-15632	Vigna stipulacea	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds-106431	drVigStip.JP252948.2.0.cds-106431	Vigna stipulacea	CDS
cds-106430	drVigStip.JP252948.2.0.cds-106430	Vigna stipulacea	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
five_prime_utr-16589	drVigStip.JP252948.2.0.five_prime_utr-16589	Vigna stipulacea	five_prime_UTR
five_prime_utr-16588	drVigStip.JP252948.2.0.five_prime_utr-16588	Vigna stipulacea	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drVigStip.JP252948.2.0.Vigst.08G156600.01	drVigStip.JP252948.2.0.Vigst.08G156600.01	Vigna stipulacea	polypeptide
drVigStip.JP252948.2.0.Vigst.08G156600.01	drVigStip.JP252948.2.0.Vigst.08G156600.01-protein	Vigna stipulacea	polypeptide

Homology

[Close]

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0F9V2|A0A3Q0F9V2_VIGRR (Uncharacterized protein LOC106769621 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106769621 PE=4 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.150e-76
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117
            MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK
Sbjct:   54 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 170

[Close]

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6L174|A0A4D6L174_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG2g2575 PE=4 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.363e-76
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117
            MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK
Sbjct:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SUE2|A0AA86SUE2_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS9502 PE=4 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.363e-76
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117
            MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK
Sbjct:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371EA52|A0A371EA52_MUCPR (Uncharacterized protein OS=Mucuna pruriens OX=157652 GN=CR513_58718 PE=4 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.363e-76
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117
            MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK
Sbjct:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151UD69|A0A151UD69_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_021455 PE=4 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.363e-76
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117
            MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK
Sbjct:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
Match: tr|C6T328|C6T328_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100818672 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.363e-76
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117
            MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK
Sbjct:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
Match: tr|V7C8S6|V7C8S6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G053800g PE=4 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.363e-76
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117
            MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK
Sbjct:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2QH89|A0A0B2QH89_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048374 PE=4 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.363e-76
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117
            MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK
Sbjct:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3UXL8|A0A1S3UXL8_VIGRR (Uncharacterized protein LOC106769621 isoform X2 OS=Vigna radiata var. radiata OX=3916 GN=LOC106769621 PE=4 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.363e-76
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117
            MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK
Sbjct:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117

[Close]

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SSC0|A0A0S3SSC0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G250400 PE=4 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 9.335e-76
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0

Query:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 117
            MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK
Sbjct:   26 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK 142

[Close]

BLAST of Vigst.08G156600.01 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:7545703-7546148 REVERSE LENGTH=117)

HSP 1 Score: 190.274 bits (482), Expect = 7.735e-64
Identity = 109/118 (92.37%), Postives = 116/118 (98.31%), Query Frame = 0

Query:    1 MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREAAWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFAKAKK* 118
            MSLRIK VVDKFV+EL++ALDADIQDRIMK+REMQSYIEEREREVAEREAAWKA+LSRRE EIARQEARLKMER+NLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRF+KAKK*
Sbjct:    1 MSLRIKLVVDKFVEELKQALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRETEIARQEARLKMERENLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCLRFSKAKK* 118

The following BLAST results are available for this feature:

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
BLAST of Vigst.08G156600.01 vs. Araport11

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
tr\|A0A3Q0F9V2\|A0A3Q0F9V2_VIGRR	1.150e-76	100.00	Uncharacterized protein LOC106769621 isoform X1 OS...	[more]
tr\|A0A4D6L174\|A0A4D6L174_VIGUN	4.363e-76	100.00	Uncharacterized protein OS=Vigna unguiculata OX=39...	[more]
tr\|A0AA86SUE2\|A0AA86SUE2_9FABA	4.363e-76	100.00	Uncharacterized protein OS=Sphenostylis stenocarpa...	[more]
tr\|A0A371EA52\|A0A371EA52_MUCPR	4.363e-76	100.00	Uncharacterized protein OS=Mucuna pruriens OX=1576...	[more]
tr\|A0A151UD69\|A0A151UD69_CAJCA	4.363e-76	100.00	Uncharacterized protein OS=Cajanus cajan OX=3821 G...	[more]
tr\|C6T328\|C6T328_SOYBN	4.363e-76	100.00	Uncharacterized protein OS=Glycine max OX=3847 GN=...	[more]
tr\|V7C8S6\|V7C8S6_PHAVU	4.363e-76	100.00	Uncharacterized protein OS=Phaseolus vulgaris OX=3...	[more]
tr\|A0A0B2QH89\|A0A0B2QH89_GLYSO	4.363e-76	100.00	Uncharacterized protein OS=Glycine soja OX=3848 GN...	[more]
tr\|A0A1S3UXL8\|A0A1S3UXL8_VIGRR	4.363e-76	100.00	Uncharacterized protein LOC106769621 isoform X2 OS...	[more]
tr\|A0A0S3SSC0\|A0A0S3SSC0_PHAAN	9.335e-76	100.00	Uncharacterized protein OS=Vigna angularis var. an...	[more]

BLAST of Vigst.08G156600.01 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs UniProt Swissprot)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Vigst.08G156600.01 vs. Araport11
Analysis Date: 2024-08-17 (Blastp of Vigna stipulacea acc. JP252948 v1.0 proteins vs arabidopsis Araport11)
Total hits: 1

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
\|	7.735e-64	92.37	Symbols: no symbol available \| no full name availa...	[more]

InterPro

Analysis Name: InterProScan Analysis for Vigna stipulacea acc. JP252948 genome v1.0
Date Performed: 2024-08-17

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35715	OS08G0511800 PROTEIN	coord: 1..117

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Chr08:16156086..16162367-
coding sequence from alignment at Chr08:16156086..16162367-

mRNA sequence

>drVigStip.JP252948.2.0.Vigst.08G156600.01 ID=drVigStip.JP252948.2.0.Vigst.08G156600.01; Name=Vigst.08G156600.01; organism=Vigna stipulacea; type=mRNA; length=354bp
ATGTCTCTCCGAATAAAGGCAGTGGTAGATAAATTTGTCCAAGAGTTGCA
GGAAGCGTTGGATGCTGATATTCAGGATAGGATCATGAAGGATAGAGAGA
TGCAAAGTTACATTGAAGAACGTGAACGTGAGGTTGCGGAACGTGAGGCT
GCTTGGAAGGCTGATCTTTCTCGTCGTGAGGCTGAGATTGCCCGACAAGA
AGCAAGGCTGAAGATGGAGAGAGACAATCTGGAGAAAGAGAAAAGTGTGT
TGATGGGAACTGCGTCTAATCAAGATAACCAAGATGGAGCTCTTGAAATT
ACTGTAAGTGGTGAAAAATACCGTTGCCTCAGATTTGCCAAGGCAAAAAA
ATAA

protein sequence of drVigStip.JP252948.2.0.Vigst.08G156600.01

>drVigStip.JP252948.2.0.Vigst.08G156600.01 ID=drVigStip.JP252948.2.0.Vigst.08G156600.01; Name=drVigStip.JP252948.2.0.Vigst.08G156600.01; organism=Vigna stipulacea; type=polypeptide; length=118bp
MSLRIKAVVDKFVQELQEALDADIQDRIMKDREMQSYIEEREREVAEREA
AWKADLSRREAEIARQEARLKMERDNLEKEKSVLMGTASNQDNQDGALEI
TVSGEKYRCLRFAKAKK*

mRNA from alignment at Chr08:16156086..16162367-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>drVigStip.JP252948.2.0.Vigst.08G156600.01 ID=drVigStip.JP252948.2.0.Vigst.08G156600.01; Name=Vigst.08G156600.01; organism=Vigna stipulacea; type=mRNA; length=6282bp; location=Sequence derived from: Chr08:16156086..16162367- (Vigna stipulacea
GGGAAAGTGTAAAATAATAATAAAAATTTAAAGGAATAACAAATAGTTAA
TATATCAACGAAATTAAGCTGCGTTTTCTTTTGTTTTTGCATGTTTTGTG
CCAAAATTTCGAAGTGAGAGGGAGGTGCTCATTTCCTCTTTTCTTCTTTT
TCTATTTTTTCCCCGTCTTCTTTCTTCTTTTTCTTCTTCACAGCAAACCC
TAGGGTTAATGGAAACAAGGGTGAGAGAGAGAGCGGCGTGAGAAAATCCA
AGGCTCGAATGAAGTAACGAAAAGTAGAAATTAGGAGGATGAGAGGTGCG
GTTCGAGAAGAGTTATGGAAAAAAGGGAATCCAAGGTTGGTGGAGTAATT
TCTAGGGTGGGACTTTAATTGAGAGGTCGAAGAAGGAGCCTGTAAATAGG
GAGAGTGTGCGATTGAGAAATACAGCAATTGATTCTAGAGTGTAAGAGTG
AGGGTTTGAGTGAAAGGGAGTCGCGGAAGGTTGCGGAGCTCGTTGGAAGT
TTTGTGCAGCGAGAAAGATCAAGTTCCAGGTATGGGGAGCTAAAACCAAT
TTTTCTTGATTTTTTTGTTTGAGCTGTGGTTCGATTCTTGAATCATGAGG
TTGGGTGTTATCATATCTGAAGGGAGTATTGTGTGCTAAATTGTTATAAT
GATAAAATGGAGTAATATATTGTTTATGAAATTGAATGGATAGGGAATTG
ATACTGGAGATTCTATGACGTGAATTAGAGGAGGGTTGTATGAATTCTGT
TCGGGACAATTGGAAAATTGTTGTGTTATAATCTGGAAATCTGGAAATTT
ATATGATATCGAGGGTTATAAAAGTGATTAATTGGGCATATGGTCGAACC
AGTTTTTCTATTTTAATCTGGAATGTTTTTCGTATATTAATAAAATGAAA
TGGGAAATGATGGGATTTGTATATTAAAGAATGATTGAGTTGAAAGGTCA
AATCCTACCAATATAATGTGACCAATGTAAGTTGGTATTGTTTCATATTA
ACTTGAACGGGGACAAATGCTGAAGGTATATTAATATGTGTATTGAACCA
AAGGGGAACTCAAGGTAAGGAGTGGTGACTGTAATTCTGAATTAGAATGT
GAACTAGCTTGTCAATGTTATGCAGGATGGAAATGTTTGTATGATGAAAA
GGATATATGCTATGAGATGTGAAACATATGGGTGAACATTTGTTAGAGTT
AACTATATAAGAAGGATTGTATGTACCGTTATATTTGATTGAAATGATTA
ACGTAGCTAAATTAGTTAAACTTGGAAATAATAGGTACCAGTATATTTTT
CAATCTGTTTTGGGTAGGTGGTAAATGAGTTCAACCTAACTTGTATGACA
TAGATTCTAGTGAGACAAAATTATGAAAAATGGAATAAGGGTTGAAATAA
AGTTTAATATATATATATATATATATATATATATATATGTATATATATAT
ATATATATGTATGTATGTATGTATGCATACATATAAAATTGTCACGTGGG
TAAGCACTTATTTCAATATATATGTTTGCTGGTATGATTTTAAAGGATCA
TAATTAACAGTTGATTGTAAATGATTAGACTATGTTTTCTGTCAGGAGGG
TAATTTGGTTGTGAAATTGTGTTGCGTGGAAATTATGTGGGTGAAATGGG
AATAATATGACTCGTATACTGGAATGTTGGTGGCTACTCTGAGTGATGTT
TATAAAATGTTGGAGGGGGCTATATCTGAAGTGAACACTATATTGAACCG
ATAGGAGTTGTTGTTCATTCTGAAGTGCTTATGAACATTACTATATCTGC
GTGGATGTATAAAATCTTTATGGGTGATGTTAGGAGGATCATTTGAAGTG
GGAAATAATTTTAAATCGAATTGAAATGGTATTAGAATTGTTGAGAATCT
GATTTTAAATATATGAGAAGATTAAACTGCTGTTTTCTGCATTAAATGAG
ATGCTTGTTATCATTGTGAGATTGGATTCTTTGAAGATTAGAATGGTTCT
CTTTTAATCTTAAGTTATGGGGAGGGTTAAAAAGGGGAATTTCGCTAATT
ATTGTTTTGAATGAGACTTTCAAGCAATGCAATGTTAACTTTGAATTCTG
ATTCATTTGACGACTTTTTATTGTATTATTTTTATAATTTGTATTTCAAG
TAATAGGTCCTCTTTTTAATTGATTTCAATTTTTTTTTTTTACTTTATCA
CAGTTTTTTCATTATAACTGAAATTGGGGTGTTACAAATTCCATTTATGA
AATTGAGTAATTGGATATAGAAAGATTATTTTGGATTTGTGTGCTCTCAG
ATTGGGGTTTCAGCACAAGATGTCTCTCCGAATAAAGGCAGTGGTAGATA
AATTTGTCCAAGAGTTGCAGGAAGCGTTGGATGCTGATATTCAGGATAGG
ATCATGAAGGATAGAGAGATGCAAAGTTACATTGAAGAACGTGAACGTGA
GGTTGCGGAACGTGAGGCTGCTTGGAAGGCTGATCTTTCTCGTCGTGAGG
TATCTACTGATTACCTATTTCTCTCAAATTTGTAATCTTTTTAATTCTTC
TTACTTTAATGTGCTCTCTCCTAGTGGGATAAGACTATTATTGTTGTAAT
AGAGGTTGTGAAGTTTGAGAGTCTGTGTGGTTGTTGTTTTTCCTGTGTGA
AGGTCTCAAACACACGTTCATTTCAAAGATACAGTTTGTTACTTCTCAGT
AACTGAAGCCTTGGAACGTCAGCCAACTAAGTGCAACATTTATCCAAATA
CCCTCTTTGTTAATCACGGAGCTTCTCAAATTTTGACCTGTAAAATTGAA
CGTTATGTTCTTCCAAAAGATAATATTGAAAAGACCTATTAATGAACACA
TCAATAATTTAACATTTTCACTTCATAGTAAAGAAAAATAGAAAATCACA
ATAATAAAGTTTGATAATACATTAGTACTAAATAAGATCAAACTACATAA
CCGATCAAATCAAAACATATATAACTTTATAAAAACTCAACTTATTAAAG
TGATAACATTTTAAATGGGAGTTAAGTTCTTCAAATAATTTGAGTTTCCA
GTAAAACATTTTGTGGGGTCAATGAGGGCTAAAATGACATCATTTCAAAC
TCACTTCTTATTTCAGAGTTTTCTCAAGTTTAATGCTTTTTAAGGGATAA
TTAACTCGTTTGGCCTACCTGGAATTATAAGAGTTTACTTAAAAGTTTGA
CAACATGGTTTTAATGTGCATTCTACATTTCCTTTCACATAGACTATGAG
TAACTCCGATACCATTTTGAGAAATTGAAGTTTAACCCTAACTTAAACTC
ATATGACTGATTTCCAAAGTGAGGTTTTTGTTTACTTATATACTATAATT
TGATCTTATATCTAATTTATATAGACTCTTTAGCACACTCTCACATGCCG
AGAACTGAACATCTCAAGCGTGGGGTTAAACTTGAGTAGGATAGGCTCTA
CATTACTTTAATACTCTACTTTAAAAAAGTGGAATTTAAGTCTAACTCAA
TTTTACCAAACTAACAAAACTAATTTTAAGGTGAGGTTTGTAGTGGCTTA
TAAATCATAATTTGGCTATATTTCTAATCCATATTGGATATCTAACATAT
ACATGGTGAATAACTATAGACTTCCTCTCAACTTTTGTTTTTGGTTCAAG
TGAGGACTGACTACAAAGGTGGGCATTGGAGTAAGTCCATAGGGGCATGG
GAAGGCGATGAACTGCATTACAGGGTTTGAACCCATAGTACGTGTCCCAC
AGCCTGACCTGTGTCATTGGGACACTCCTCATAGCTATGCTTCTGATAAT
TTTTACATATAATAATTGTCTTTGTTATGTGAACATCTGAGAATGTTGAA
CCCAAATTATTTTGTTACTGTTGCTGCAAGACTCTGGTAGTACTTTGCAC
AATAATCAATAAAAGATGTCAATGGTTGTAAAATACTGTTTATGGTTGAT
CAGATGAAGTGAAAGAATACTGTTGTTCCTAGTTTAGATTTATTGGTAAA
ACTCCGATTAACTTTCTTTTATCAGCTGAACATGGAAATGACTCTGCATG
AATTATGGCTTATATTTTTAGGTAGGTAGTTCTCAATGTCTAAAAATAAA
CAAAAAAAAAAAAAAAAAGGAATGTTAACCGTGTTCTACACTTCTACGGG
GCATTGAAACGAATTATGGCTTAAATTACTTGGTAGTTTTCTATTCGTCT
AAAAGTACATAATTTTTTAAACAAGTTGTTATTAGATTTTTGTCTTGGTA
TTTGTACCCTTTCCTAAATTTTCTGCTAGGCTCATCTGGTATTTATATGC
AAGATCTGTGATAGCAATGTGCCAATGCCAATTTCACTTTACTTTTGACA
GGAATCCTGTTATGTGACATATGACCTACATTTGATCACGATGTAGCATT
TCATTTTATTTTCCTAATTTCTAAATTGTGACCTTGCATCTCTTATTTTG
GTGAATAATTGGCTCAGTGAAATGCATTAGATTAATTTGAAGTTGATGAT
ATATTGATATTGATGCAATTTCAGCGAACTGCTTCTGAAATTGAAGAAAG
GAAGCAAACTGGCCTTTAGGCACTTGAAAATACAAGGAAGTGATTCTTTA
ACTAAAAGAATGTGAGGTTGATTATTTTGTACCAGATACATTGATATTGT
CGAATTTTAGTCTAATGCTTCTGAAATTGAAGAAAGAAAGCAAAGTGGCT
TTTAATCATGAACAGTTTTCATCCCCCAAATTTCTGTGTTTGACTCATGA
TAAACCCCTTAATAGGAGTTATGACTCAATTAATATTTTGGAACAAATCT
AAATAAAAACAACAATCCCTAAAATTTTAAGCTAAAGATAACAAATATAA
CTAAAACTTTTGATTCATGGTTGCAAGAAGCCGAATAAATAGTGTTAGAA
TTGCAAAAAAGGGTTAAGCAGTAATTAATTAGCTGACTTGTAAGGTTTTA
TTTACTATTATTTGACTTTATTTCTAGTCCACATGAGATTTTCAATACAT
TCCTCACATCAAAGAATGAGCATTTCAAGTGAAAAATTAAATATTTGTGG
GTGAGTCCTATAACAGATAACATAACAAGCTTGGAATGACTTTGATAGGA
TTTTAGAAAGTGGGATTATAAATAACTCTACCTCATAAAATTGCTTGTAA
ATTGAGATTTACAATTCATTTAATCTTATTTTTAGTCAATGTGAGATCTT
CAACAAGCATCTAAAATCTGAATCAAGACCTTTATATTAGATCTTGAAAT
TCCTTTGCCCTAGGAGTCTGCCTCTGGGATATTGATTTAGTGAATGTTGT
TCTTGCAATCAATTCTTCAGATGACACCAGAGAAGCCCCTCTGCAAAATG
TTTCTTCCTTAGACTAGAGCGTTATATTTTTCAGGCATTTCTACTCTACA
CCACACTTCTTTTTGCGTCTTTAATGACTGATAACAGGTTTCAGACACGT
TCCTGGGACCTAGTTTATGTTTTGTGAAGATATGTGTTATATCATTCAGT
GCCCTATTTTACGTTGTGAAAATGTGTGCTACATTATTCGTAAAGCATAA
ATATTGTTGCATTTGGGAATATGAAACAAAAAAGATTGAAATTGACCGGA
CATTCTAACAATATTTCTATTTCCAAACAAATATCCATTGTATAAAATTT
CCATTTATGACCTTGCAATTAAAGAACAAAAAATCAGACATCCTCACTGT
CCTTAATTTTTGAATGTTCCAGGCTGAGATTGCCCGACAAGAAGCAAGGC
TGAAGATGGAGAGAGACAATCTGGAGAAAGAGAAAAGTGTGTTGATGGGA
ACTGCGTCTAATCAAGATAACCAAGATGGAGCTCTTGAAATTACTGTAAG
TGGTGAAAAATACCGTTGCCTCAGATTTGCCAAGGCAAAAAAATAAGGCT
TTGCTGCGGTGACAAAAAGGAAATATATAATCTTCACTTCTGCACCTCCC
ATGGAAGAGGACTTGTGCTGCCGAGGAGCCCACACGCAAAGCCAAGCTCA
ATTTGTGCACCTCCACGAACAGTTATTGAAAGCAAAATTGTTCATTGGTG
GTTTATACAATTCCAGTTGGGATAGTGTTTTATGACTTGCTCAATTATTT
TATTGATTTTTTTTTCTGTGATGATGTTGATGCTCTGTTTTGCTGAAAAT
ACAATTTTGGCTATATAGTTAATTCTCAAAGGATTGTAAGCGATCTATTG
AGAAAAAAATGACAATCAGCCGAGATAGTTTTGACAGCAGATTGCATGGT
TTCTAAAAGGGAGTGCAGAGGAGAAAAAACGG

Coding sequence (CDS) from alignment at Chr08:16156086..16162367-

>drVigStip.JP252948.2.0.Vigst.08G156600.01 ID=drVigStip.JP252948.2.0.Vigst.08G156600.01; Name=Vigst.08G156600.01; organism=Vigna stipulacea; type=CDS; length=354bp; location=Sequence derived from: Chr08:16156086..16162367- (Vigna stipulacea
ATGTCTCTCCGAATAAAGGCAGTGGTAGATAAATTTGTCCAAGAGTTGCA
GGAAGCGTTGGATGCTGATATTCAGGATAGGATCATGAAGGATAGAGAGA
TGCAAAGTTACATTGAAGAACGTGAACGTGAGGTTGCGGAACGTGAGGCT
GCTTGGAAGGCTGATCTTTCTCGTCGTGAGGCTGAGATTGCCCGACAAGA
AGCAAGGCTGAAGATGGAGAGAGACAATCTGGAGAAAGAGAAAAGTGTGT
TGATGGGAACTGCGTCTAATCAAGATAACCAAGATGGAGCTCTTGAAATT
ACTGTAAGTGGTGAAAAATACCGTTGCCTCAGATTTGCCAAGGCAAAAAA
ATAA

Search form

Vigst.08G156600.01